Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018693.01.T01 | XP_019432866.1 | 70.27 | 222 | 33 | 2 | 1 | 191 | 1 | 220 | 3.57E-99 | 296 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018693.01.T01 | Q9SFF9 | 54.018 | 224 | 63 | 5 | 6 | 191 | 7 | 228 | 1.39E-67 | 209 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018693.01.T01 | G7JQ50 | 83.333 | 222 | 5 | 2 | 1 | 191 | 1 | 221 | 1.13e-121 | 352 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048773.01 | MsG0480018693.01 | -0.805859 | 1.089164e-49 | 5.825226e-47 |
| MsG0080049063.01 | MsG0480018693.01 | -0.811545 | 6.636535e-51 | 4.119716e-48 |
| MsG0180000843.01 | MsG0480018693.01 | -0.814903 | 1.215142e-51 | 8.256112e-49 |
| MsG0180001270.01 | MsG0480018693.01 | -0.816867 | 4.432112e-52 | 3.177672e-49 |
| MsG0180001371.01 | MsG0480018693.01 | -0.809780 | 1.597948e-50 | 9.467927e-48 |
| MsG0180001800.01 | MsG0480018693.01 | 0.812936 | 3.299239e-51 | 2.125326e-48 |
| MsG0180002700.01 | MsG0480018693.01 | -0.818269 | 2.141017e-52 | 1.595087e-49 |
| MsG0180003237.01 | MsG0480018693.01 | 0.830710 | 2.519071e-55 | 2.675437e-52 |
| MsG0180003452.01 | MsG0480018693.01 | 0.806921 | 6.504187e-50 | 3.574353e-47 |
| MsG0180003600.01 | MsG0480018693.01 | 0.814414 | 1.559868e-51 | 1.046031e-48 |
| MsG0180004059.01 | MsG0480018693.01 | 0.804011 | 2.650575e-49 | 1.351770e-46 |
| MsG0180004424.01 | MsG0480018693.01 | 0.843220 | 1.601834e-58 | 2.488859e-55 |
| MsG0180004733.01 | MsG0480018693.01 | -0.807798 | 4.238030e-50 | 2.382784e-47 |
| MsG0180005130.01 | MsG0480018693.01 | 0.892223 | 1.934932e-74 | 1.752702e-70 |
| MsG0180005143.01 | MsG0480018693.01 | 0.893234 | 7.599770e-75 | 7.182024e-71 |
| MsG0180005349.01 | MsG0480018693.01 | -0.822192 | 2.701333e-53 | 2.245065e-50 |
| MsG0180005807.01 | MsG0480018693.01 | -0.806247 | 9.024501e-50 | 4.874666e-47 |
| MsG0180006195.01 | MsG0480018693.01 | 0.822060 | 2.899266e-53 | 2.400448e-50 |
| MsG0280010569.01 | MsG0480018693.01 | -0.849517 | 3.074264e-60 | 5.842586e-57 |
| MsG0280010623.01 | MsG0480018693.01 | 0.812340 | 4.453858e-51 | 2.824500e-48 |
| MsG0280010926.01 | MsG0480018693.01 | -0.838337 | 3.054116e-57 | 4.077854e-54 |
| MsG0280011411.01 | MsG0480018693.01 | -0.809559 | 1.782216e-50 | 1.049777e-47 |
| MsG0380013212.01 | MsG0480018693.01 | 0.854661 | 1.060632e-61 | 2.386308e-58 |
| MsG0380013213.01 | MsG0480018693.01 | 0.855152 | 7.644038e-62 | 1.747894e-58 |
| MsG0380014007.01 | MsG0480018693.01 | -0.804940 | 1.697043e-49 | 8.864690e-47 |
| MsG0380014909.01 | MsG0480018693.01 | -0.811517 | 6.730010e-51 | 4.174735e-48 |
| MsG0480018617.01 | MsG0480018693.01 | 0.835225 | 1.898907e-56 | 2.307505e-53 |
| MsG0480018621.01 | MsG0480018693.01 | 0.838245 | 3.224766e-57 | 4.293411e-54 |
| MsG0480018625.01 | MsG0480018693.01 | 0.808462 | 3.060616e-50 | 1.751149e-47 |
| MsG0480018692.01 | MsG0480018693.01 | 0.907608 | 4.216048e-81 | 7.536841e-77 |
| MsG0480018693.01 | MsG0480018697.01 | 0.927385 | 1.265493e-91 | 6.300381e-87 |
| MsG0480018693.01 | MsG0480019322.01 | 0.821900 | 3.156796e-53 | 2.602087e-50 |
| MsG0480018693.01 | MsG0480019325.01 | 0.836202 | 1.074574e-56 | 1.344885e-53 |
| MsG0480018693.01 | MsG0480019346.01 | 0.851893 | 6.595172e-61 | 1.354277e-57 |
| MsG0480018693.01 | MsG0480019348.01 | 0.863713 | 2.045980e-64 | 6.263627e-61 |
| MsG0480018693.01 | MsG0480019501.01 | -0.804678 | 1.925001e-49 | 9.987053e-47 |
| MsG0480018693.01 | MsG0480019592.01 | -0.804781 | 1.832254e-49 | 9.531482e-47 |
| MsG0480018693.01 | MsG0480019641.01 | -0.800424 | 1.450851e-48 | 6.753352e-46 |
| MsG0480018693.01 | MsG0480019971.01 | -0.807833 | 4.166313e-50 | 2.344526e-47 |
| MsG0480018693.01 | MsG0480020285.01 | 0.829586 | 4.737193e-55 | 4.869436e-52 |
| MsG0480018693.01 | MsG0480020408.01 | -0.808751 | 2.654696e-50 | 1.530333e-47 |
| MsG0480018693.01 | MsG0480020595.01 | 0.803671 | 3.118316e-49 | 1.576397e-46 |
| MsG0480018693.01 | MsG0480020753.01 | -0.824389 | 8.287792e-54 | 7.330358e-51 |
| MsG0480018693.01 | MsG0480021063.01 | 0.886192 | 4.237028e-72 | 2.996253e-68 |
| MsG0480018693.01 | MsG0480021091.01 | 0.829373 | 5.338764e-55 | 5.454309e-52 |
| MsG0480018693.01 | MsG0480021168.01 | -0.807916 | 4.000286e-50 | 2.255923e-47 |
| MsG0480018693.01 | MsG0480021406.01 | -0.822298 | 2.553000e-53 | 2.128406e-50 |
| MsG0480018693.01 | MsG0480021682.01 | -0.807300 | 5.407680e-50 | 3.001266e-47 |
| MsG0480018693.01 | MsG0480021817.01 | -0.807667 | 4.518992e-50 | 2.531999e-47 |
| MsG0480018693.01 | MsG0480022130.01 | -0.811582 | 6.515807e-51 | 4.048551e-48 |
| MsG0480018693.01 | MsG0480022537.01 | -0.815587 | 8.563911e-52 | 5.928645e-49 |
| MsG0480018693.01 | MsG0480022647.01 | -0.811613 | 6.413364e-51 | 3.988128e-48 |
| MsG0480018693.01 | MsG0480023216.01 | -0.804066 | 2.582283e-49 | 1.318830e-46 |
| MsG0480018693.01 | MsG0480023389.01 | -0.801872 | 7.335383e-49 | 3.541944e-46 |
| MsG0480018693.01 | MsG0480023553.01 | -0.810006 | 1.428447e-50 | 8.513932e-48 |
| MsG0480018693.01 | MsG0480023845.01 | -0.810585 | 1.071550e-50 | 6.484530e-48 |
| MsG0480018693.01 | MsG0480023992.01 | -0.824737 | 6.864518e-54 | 6.133463e-51 |
| MsG0480018693.01 | MsG0580024679.01 | -0.806561 | 7.748603e-50 | 4.219024e-47 |
| MsG0480018693.01 | MsG0580024782.01 | 0.834504 | 2.884673e-56 | 3.430309e-53 |
| MsG0480018693.01 | MsG0580024873.01 | -0.811678 | 6.209438e-51 | 3.867756e-48 |
| MsG0480018693.01 | MsG0580025024.01 | 0.833253 | 5.930107e-56 | 6.791617e-53 |
| MsG0480018693.01 | MsG0580025097.01 | -0.809874 | 1.524669e-50 | 9.055819e-48 |
| MsG0480018693.01 | MsG0580025906.01 | -0.800920 | 1.149421e-48 | 5.418056e-46 |
| MsG0480018693.01 | MsG0580025965.01 | 0.848956 | 4.402069e-60 | 8.216210e-57 |
| MsG0480018693.01 | MsG0580026521.01 | 0.818330 | 2.073449e-52 | 1.547481e-49 |
| MsG0480018693.01 | MsG0580027394.01 | -0.800826 | 1.201020e-48 | 5.647531e-46 |
| MsG0480018693.01 | MsG0580027751.01 | 0.860853 | 1.545645e-63 | 4.285646e-60 |
| MsG0480018693.01 | MsG0580027752.01 | 0.839581 | 1.454202e-57 | 2.016963e-54 |
| MsG0480018693.01 | MsG0580027753.01 | 0.849068 | 4.098206e-60 | 7.677417e-57 |
| MsG0480018693.01 | MsG0580028024.01 | -0.802094 | 6.604374e-49 | 3.206911e-46 |
| MsG0480018693.01 | MsG0580028306.01 | -0.817905 | 2.587413e-52 | 1.908501e-49 |
| MsG0480018693.01 | MsG0580028495.01 | -0.818800 | 1.622304e-52 | 1.226520e-49 |
| MsG0480018693.01 | MsG0580028587.01 | 0.806582 | 7.668988e-50 | 4.177816e-47 |
| MsG0480018693.01 | MsG0580028925.01 | -0.818978 | 1.477957e-52 | 1.123082e-49 |
| MsG0480018693.01 | MsG0580029291.01 | 0.830405 | 2.992138e-55 | 3.149366e-52 |
| MsG0480018693.01 | MsG0580029414.01 | -0.811936 | 5.455958e-51 | 3.421970e-48 |
| MsG0480018693.01 | MsG0580029682.01 | -0.800415 | 1.456648e-48 | 6.778879e-46 |
| MsG0480018693.01 | MsG0580029937.01 | 0.809860 | 1.535354e-50 | 9.115844e-48 |
| MsG0480018693.01 | MsG0580029938.01 | 0.814293 | 1.658698e-51 | 1.108638e-48 |
| MsG0480018693.01 | MsG0580029967.01 | -0.805215 | 1.486168e-49 | 7.817734e-47 |
| MsG0480018693.01 | MsG0680030379.01 | 0.863333 | 2.683460e-64 | 8.106044e-61 |
| MsG0480018693.01 | MsG0680030380.01 | 0.833550 | 5.000821e-56 | 5.778513e-53 |
| MsG0480018693.01 | MsG0680030382.01 | 0.856957 | 2.264205e-62 | 5.497878e-59 |
| MsG0480018693.01 | MsG0680030464.01 | -0.810669 | 1.027662e-50 | 6.233083e-48 |
| MsG0480018693.01 | MsG0680030680.01 | -0.823905 | 1.076571e-53 | 9.393311e-51 |
| MsG0480018693.01 | MsG0680030957.01 | -0.805277 | 1.442561e-49 | 7.600164e-47 |
| MsG0480018693.01 | MsG0680031200.01 | 0.804723 | 1.883571e-49 | 9.784127e-47 |
| MsG0480018693.01 | MsG0680032026.01 | 0.826783 | 2.244620e-54 | 2.125803e-51 |
| MsG0480018693.01 | MsG0680032413.01 | -0.806079 | 9.789287e-50 | 5.264994e-47 |
| MsG0480018693.01 | MsG0680032461.01 | 0.853638 | 2.093649e-61 | 4.553882e-58 |
| MsG0480018693.01 | MsG0680034064.01 | -0.801807 | 7.564680e-49 | 3.646452e-46 |
| MsG0480018693.01 | MsG0680034391.01 | 0.827519 | 1.495622e-54 | 1.447232e-51 |
| MsG0480018693.01 | MsG0680034969.01 | 0.808368 | 3.205841e-50 | 1.829741e-47 |
| MsG0480018693.01 | MsG0680034974.01 | 0.845194 | 4.726724e-59 | 7.815515e-56 |
| MsG0480018693.01 | MsG0680034980.01 | 0.829061 | 6.352909e-55 | 6.430028e-52 |
| MsG0480018693.01 | MsG0680034981.01 | 0.846331 | 2.323477e-59 | 3.984974e-56 |
| MsG0480018693.01 | MsG0780035932.01 | 0.857587 | 1.474444e-62 | 3.657661e-59 |
| MsG0480018693.01 | MsG0780036260.01 | 0.814743 | 1.318803e-51 | 8.922046e-49 |
| MsG0480018693.01 | MsG0780036376.01 | 0.831663 | 1.469072e-55 | 1.604935e-52 |
| MsG0480018693.01 | MsG0780036649.01 | 0.809236 | 2.090359e-50 | 1.220766e-47 |
| MsG0480018693.01 | MsG0780038318.01 | 0.809096 | 2.239834e-50 | 1.303155e-47 |
| MsG0480018693.01 | MsG0780038784.01 | -0.801391 | 9.206198e-49 | 4.391257e-46 |
| MsG0480018693.01 | MsG0780039233.01 | -0.810171 | 1.316387e-50 | 7.879377e-48 |
| MsG0480018693.01 | MsG0780039686.01 | 0.835097 | 2.046032e-56 | 2.476232e-53 |
| MsG0480018693.01 | MsG0780039746.01 | -0.804513 | 2.083898e-49 | 1.076479e-46 |
| MsG0480018693.01 | MsG0780039975.01 | -0.828256 | 9.946341e-55 | 9.833609e-52 |
| MsG0480018693.01 | MsG0780040278.01 | -0.808588 | 2.877240e-50 | 1.651544e-47 |
| MsG0480018693.01 | MsG0780040343.01 | -0.817367 | 3.421856e-52 | 2.487103e-49 |
| MsG0480018693.01 | MsG0780040615.01 | 0.854010 | 1.636223e-61 | 3.603334e-58 |
| MsG0480018693.01 | MsG0780041004.01 | -0.837612 | 4.689629e-57 | 6.124911e-54 |
| MsG0480018693.01 | MsG0780041706.01 | -0.802427 | 5.640659e-49 | 2.762412e-46 |
| MsG0480018693.01 | MsG0880042728.01 | 0.827891 | 1.217503e-54 | 1.190999e-51 |
| MsG0480018693.01 | MsG0880042876.01 | -0.809407 | 1.921044e-50 | 1.127021e-47 |
| MsG0480018693.01 | MsG0880043249.01 | -0.816508 | 5.334520e-52 | 3.787021e-49 |
| MsG0480018693.01 | MsG0880043250.01 | -0.810283 | 1.245115e-50 | 7.474369e-48 |
| MsG0480018693.01 | MsG0880043459.01 | 0.862681 | 4.264474e-64 | 1.259495e-60 |
| MsG0480018693.01 | MsG0880043997.01 | 0.855001 | 8.451163e-62 | 1.923015e-58 |
| MsG0480018693.01 | MsG0880044001.01 | 0.834198 | 3.442945e-56 | 4.056100e-53 |
| MsG0480018693.01 | MsG0880044026.01 | 0.823109 | 1.652983e-53 | 1.410194e-50 |
| MsG0480018693.01 | MsG0880044028.01 | 0.833887 | 4.120267e-56 | 4.809663e-53 |
| MsG0480018693.01 | MsG0880044538.01 | -0.819002 | 1.459595e-52 | 1.109834e-49 |
| MsG0480018693.01 | MsG0880044558.01 | -0.809879 | 1.520898e-50 | 9.034646e-48 |
| MsG0480018693.01 | MsG0880045801.01 | 0.833051 | 6.660284e-56 | 7.582487e-53 |
| MsG0480018693.01 | MsG0880046334.01 | 0.815558 | 8.692060e-52 | 6.012540e-49 |
| MsG0480018693.01 | MsG0880046434.01 | 0.826059 | 3.338717e-54 | 3.097499e-51 |
| MsG0480018693.01 | MsG0880046764.01 | -0.814284 | 1.666474e-51 | 1.113535e-48 |
| MsG0480018693.01 | MsG0880046765.01 | -0.809390 | 1.937301e-50 | 1.136033e-47 |
| MsG0480018693.01 | MsG0880046768.01 | 0.809653 | 1.701330e-50 | 1.004666e-47 |
| MsG0480018693.01 | MsG0880046791.01 | -0.823453 | 1.373703e-53 | 1.183272e-50 |
| MsG0480018693.01 | MsG0880046946.01 | 0.815990 | 6.964372e-52 | 4.874765e-49 |
| MsG0480018693.01 | MsG0880047312.01 | 0.843050 | 1.778176e-58 | 2.747880e-55 |
| MsG0480018693.01 | MsG0880047460.01 | 0.876874 | 9.866399e-69 | 4.861492e-65 |
| MsG0480018693.01 | MsG0880047656.01 | -0.805907 | 1.064171e-49 | 5.698314e-47 |
| MsG0380015438.01 | MsG0480018693.01 | -0.804431 | 2.167018e-49 | 1.117098e-46 |
| MsG0380015547.01 | MsG0480018693.01 | -0.803738 | 3.021135e-49 | 1.529952e-46 |
| MsG0380015603.01 | MsG0480018693.01 | -0.817928 | 2.556530e-52 | 1.887046e-49 |
| MsG0380015659.01 | MsG0480018693.01 | 0.848329 | 6.567767e-60 | 1.201059e-56 |
| MsG0380016194.01 | MsG0480018693.01 | -0.824215 | 9.106308e-54 | 8.014903e-51 |
| MsG0380016284.01 | MsG0480018693.01 | -0.812515 | 4.078962e-51 | 2.598786e-48 |
| MsG0380016452.01 | MsG0480018693.01 | -0.806707 | 7.219072e-50 | 3.945266e-47 |
| MsG0380016458.01 | MsG0480018693.01 | 0.821702 | 3.508480e-53 | 2.875652e-50 |
| MsG0380016836.01 | MsG0480018693.01 | -0.832171 | 1.100745e-55 | 1.220562e-52 |
| MsG0380017033.01 | MsG0480018693.01 | -0.819695 | 1.014638e-52 | 7.864138e-50 |
| MsG0380018037.01 | MsG0480018693.01 | -0.831285 | 1.820543e-55 | 1.966539e-52 |
| MsG0280007513.01 | MsG0480018693.01 | 0.881910 | 1.619677e-70 | 9.665138e-67 |
| MsG0280007628.01 | MsG0480018693.01 | -0.801595 | 8.361570e-49 | 4.008825e-46 |
| MsG0280007677.01 | MsG0480018693.01 | 0.880108 | 7.199607e-70 | 4.006295e-66 |
| MsG0280007869.01 | MsG0480018693.01 | 0.889718 | 1.884043e-73 | 1.537752e-69 |
| MsG0280007908.01 | MsG0480018693.01 | 0.815764 | 7.820383e-52 | 5.440539e-49 |
| MsG0280007910.01 | MsG0480018693.01 | 0.870089 | 1.899057e-66 | 7.294579e-63 |
| MsG0280008178.01 | MsG0480018693.01 | 0.828288 | 9.769718e-55 | 9.668240e-52 |
| MsG0280008180.01 | MsG0480018693.01 | 0.815866 | 7.422382e-52 | 5.177569e-49 |
| MsG0280008287.01 | MsG0480018693.01 | 0.817769 | 2.776278e-52 | 2.040367e-49 |
| MsG0280009430.01 | MsG0480018693.01 | -0.805497 | 1.297392e-49 | 6.874133e-47 |
| MsG0280009756.01 | MsG0480018693.01 | -0.810410 | 1.168565e-50 | 7.038601e-48 |
| MsG0280010353.01 | MsG0480018693.01 | -0.801571 | 8.456495e-49 | 4.052009e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018693.01.T01 | MTR_5g046410 | 83.333 | 222 | 5 | 2 | 1 | 191 | 1 | 221 | 2.86e-125 | 352 |
| MsG0480018693.01.T01 | MTR_5g046430 | 83.333 | 222 | 5 | 2 | 1 | 191 | 1 | 221 | 2.86e-125 | 352 |
| MsG0480018693.01.T01 | MTR_4g017030 | 83.333 | 222 | 5 | 2 | 1 | 191 | 1 | 221 | 2.86e-125 | 352 |
| MsG0480018693.01.T01 | MTR_4g017050 | 82.883 | 222 | 6 | 2 | 1 | 191 | 1 | 221 | 7.68e-125 | 351 |
| MsG0480018693.01.T01 | MTR_2g019250 | 81.532 | 222 | 9 | 2 | 1 | 191 | 1 | 221 | 2.99e-123 | 347 |
| MsG0480018693.01.T01 | MTR_4g017040 | 81.982 | 222 | 8 | 2 | 1 | 191 | 1 | 221 | 3.68e-123 | 347 |
| MsG0480018693.01.T01 | MTR_1g079490 | 67.713 | 223 | 39 | 3 | 1 | 191 | 1 | 222 | 5.63e-98 | 283 |
| MsG0480018693.01.T01 | MTR_6g005330 | 63.964 | 222 | 47 | 4 | 1 | 191 | 1 | 220 | 2.38e-88 | 258 |
| MsG0480018693.01.T01 | MTR_6g005360 | 62.443 | 221 | 52 | 2 | 1 | 191 | 1 | 220 | 7.18e-88 | 257 |
| MsG0480018693.01.T01 | MTR_6g005340 | 64.220 | 218 | 46 | 3 | 4 | 191 | 5 | 220 | 9.43e-88 | 257 |
| MsG0480018693.01.T01 | MTR_6g005310 | 64.055 | 217 | 46 | 3 | 4 | 190 | 5 | 219 | 3.66e-87 | 256 |
| MsG0480018693.01.T01 | MTR_6g005350 | 52.055 | 219 | 72 | 4 | 3 | 191 | 4 | 219 | 1.21e-64 | 198 |
| MsG0480018693.01.T01 | MTR_6g005380 | 49.761 | 209 | 73 | 2 | 1 | 178 | 1 | 208 | 9.45e-60 | 186 |
| MsG0480018693.01.T01 | MTR_1g023770 | 49.309 | 217 | 69 | 3 | 1 | 185 | 1 | 208 | 3.03e-58 | 182 |
| MsG0480018693.01.T01 | MTR_2g030855 | 50.000 | 200 | 60 | 5 | 19 | 185 | 19 | 211 | 6.02e-55 | 174 |
| MsG0480018693.01.T01 | MTR_2g031270 | 49.254 | 201 | 61 | 6 | 19 | 185 | 19 | 212 | 1.48e-50 | 162 |
| MsG0480018693.01.T01 | MTR_2g030895 | 52.326 | 172 | 47 | 4 | 48 | 185 | 7 | 177 | 2.50e-50 | 160 |
| MsG0480018693.01.T01 | MTR_2g030865 | 51.744 | 172 | 48 | 4 | 48 | 185 | 7 | 177 | 2.58e-48 | 155 |
| MsG0480018693.01.T01 | MTR_1g085500 | 36.019 | 211 | 102 | 3 | 5 | 185 | 6 | 213 | 6.78e-36 | 125 |
| MsG0480018693.01.T01 | MTR_5g036570 | 39.487 | 195 | 84 | 6 | 22 | 185 | 27 | 218 | 7.06e-32 | 115 |
| MsG0480018693.01.T01 | MTR_7g111240 | 38.660 | 194 | 86 | 5 | 22 | 185 | 20 | 210 | 2.06e-30 | 111 |
| MsG0480018693.01.T01 | MTR_7g111240 | 37.629 | 194 | 85 | 4 | 22 | 185 | 20 | 207 | 8.68e-30 | 109 |
| MsG0480018693.01.T01 | MTR_1g085140 | 35.354 | 198 | 95 | 3 | 18 | 185 | 20 | 214 | 9.99e-30 | 109 |
| MsG0480018693.01.T01 | MTR_2g031300 | 41.765 | 170 | 45 | 4 | 48 | 184 | 7 | 155 | 3.47e-29 | 106 |
| MsG0480018693.01.T01 | MTR_2g041550 | 35.071 | 211 | 92 | 6 | 4 | 183 | 7 | 203 | 1.17e-24 | 95.9 |
| MsG0480018693.01.T01 | MTR_1g112200 | 33.333 | 204 | 82 | 8 | 19 | 185 | 20 | 206 | 2.14e-24 | 95.5 |
| MsG0480018693.01.T01 | MTR_1g060120 | 30.909 | 220 | 112 | 8 | 2 | 185 | 5 | 220 | 4.21e-24 | 95.1 |
| MsG0480018693.01.T01 | MTR_8g007300 | 33.838 | 198 | 92 | 6 | 22 | 189 | 26 | 214 | 1.70e-21 | 88.2 |
| MsG0480018693.01.T01 | MTR_2g041570 | 31.604 | 212 | 100 | 6 | 4 | 184 | 7 | 204 | 4.06e-21 | 86.7 |
| MsG0480018693.01.T01 | MTR_2g041580 | 31.754 | 211 | 99 | 6 | 4 | 183 | 7 | 203 | 5.28e-21 | 86.7 |
| MsG0480018693.01.T01 | MTR_8g020750 | 34.021 | 194 | 84 | 6 | 1 | 160 | 1 | 184 | 1.36e-19 | 82.8 |
| MsG0480018693.01.T01 | MTR_8g020630 | 33.520 | 179 | 78 | 6 | 1 | 148 | 1 | 169 | 4.65e-19 | 81.3 |
| MsG0480018693.01.T01 | MTR_8g020590 | 33.684 | 190 | 89 | 6 | 26 | 184 | 19 | 202 | 7.17e-19 | 80.9 |
| MsG0480018693.01.T01 | MTR_3g019710 | 33.684 | 190 | 92 | 6 | 7 | 167 | 3 | 187 | 2.06e-18 | 79.7 |
| MsG0480018693.01.T01 | MTR_8g020770 | 35.028 | 177 | 77 | 6 | 1 | 146 | 1 | 170 | 7.39e-18 | 78.2 |
| MsG0480018693.01.T01 | MTR_2g036120 | 31.731 | 208 | 102 | 7 | 1 | 176 | 1 | 200 | 1.12e-17 | 77.8 |
| MsG0480018693.01.T01 | MTR_8g020650 | 34.211 | 152 | 67 | 4 | 26 | 148 | 22 | 169 | 1.22e-16 | 75.1 |
| MsG0480018693.01.T01 | MTR_8g020670 | 31.638 | 177 | 84 | 5 | 1 | 148 | 1 | 169 | 5.04e-16 | 73.2 |
| MsG0480018693.01.T01 | MTR_3g019650 | 33.333 | 171 | 80 | 6 | 26 | 167 | 21 | 186 | 2.62e-15 | 71.2 |
| MsG0480018693.01.T01 | MTR_0284s0010 | 32.212 | 208 | 101 | 7 | 1 | 176 | 1 | 200 | 4.66e-15 | 70.9 |
| MsG0480018693.01.T01 | MTR_2g044040 | 30.682 | 176 | 85 | 6 | 1 | 147 | 1 | 168 | 6.03e-15 | 70.5 |
| MsG0480018693.01.T01 | MTR_3g019680 | 31.313 | 198 | 93 | 8 | 1 | 167 | 1 | 186 | 1.01e-14 | 69.7 |
| MsG0480018693.01.T01 | MTR_2g045100 | 33.775 | 151 | 67 | 5 | 26 | 147 | 22 | 168 | 4.92e-14 | 67.8 |
| MsG0480018693.01.T01 | MTR_2g086640 | 43.902 | 82 | 43 | 2 | 104 | 184 | 122 | 201 | 7.05e-14 | 67.4 |
| MsG0480018693.01.T01 | MTR_2g086620 | 43.902 | 82 | 43 | 2 | 104 | 184 | 123 | 202 | 1.15e-13 | 67.0 |
| MsG0480018693.01.T01 | MTR_5g031460 | 29.379 | 177 | 90 | 5 | 1 | 149 | 1 | 170 | 1.18e-13 | 67.0 |
| MsG0480018693.01.T01 | MTR_2g086630 | 42.683 | 82 | 44 | 2 | 104 | 184 | 123 | 202 | 3.30e-13 | 65.5 |
| MsG0480018693.01.T01 | MTR_4g010340 | 30.178 | 169 | 89 | 3 | 44 | 185 | 34 | 200 | 3.39e-13 | 65.5 |
| MsG0480018693.01.T01 | MTR_8g020760 | 28.972 | 214 | 115 | 7 | 1 | 185 | 1 | 206 | 1.73e-12 | 63.9 |
| MsG0480018693.01.T01 | MTR_7g011340 | 32.787 | 183 | 87 | 6 | 26 | 176 | 22 | 200 | 9.15e-12 | 61.6 |
| MsG0480018693.01.T01 | MTR_3g019810 | 30.256 | 195 | 104 | 7 | 1 | 172 | 107 | 292 | 1.18e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018693.01.T01 | AT3G05950 | 54.018 | 224 | 63 | 5 | 6 | 191 | 7 | 228 | 1.42e-68 | 209 |
| MsG0480018693.01.T01 | AT5G39150 | 52.055 | 219 | 70 | 4 | 1 | 185 | 1 | 218 | 4.06e-64 | 197 |
| MsG0480018693.01.T01 | AT5G39160 | 52.727 | 220 | 67 | 4 | 1 | 185 | 1 | 218 | 7.15e-64 | 197 |
| MsG0480018693.01.T01 | AT5G39190 | 52.727 | 220 | 67 | 4 | 1 | 185 | 1 | 218 | 8.61e-64 | 196 |
| MsG0480018693.01.T01 | AT5G39180 | 52.055 | 219 | 70 | 4 | 1 | 185 | 1 | 218 | 8.81e-64 | 196 |
| MsG0480018693.01.T01 | AT5G39120 | 52.055 | 219 | 70 | 4 | 1 | 185 | 1 | 218 | 2.23e-63 | 195 |
| MsG0480018693.01.T01 | AT5G39130 | 51.364 | 220 | 70 | 4 | 1 | 185 | 1 | 218 | 2.79e-63 | 195 |
| MsG0480018693.01.T01 | AT5G39110 | 51.887 | 212 | 68 | 3 | 7 | 185 | 9 | 219 | 6.89e-62 | 191 |
| MsG0480018693.01.T01 | AT5G39160 | 50.909 | 220 | 67 | 4 | 1 | 185 | 1 | 214 | 2.50e-60 | 187 |
| MsG0480018693.01.T01 | AT3G04200 | 49.074 | 216 | 75 | 4 | 1 | 183 | 6 | 219 | 1.29e-58 | 183 |
| MsG0480018693.01.T01 | AT4G14630 | 49.091 | 220 | 76 | 4 | 1 | 185 | 3 | 221 | 1.18e-57 | 181 |
| MsG0480018693.01.T01 | AT5G38960 | 50.746 | 201 | 65 | 5 | 18 | 185 | 22 | 221 | 1.02e-54 | 173 |
| MsG0480018693.01.T01 | AT5G38910 | 50.000 | 220 | 73 | 6 | 1 | 185 | 1 | 218 | 1.54e-53 | 170 |
| MsG0480018693.01.T01 | AT5G38930 | 50.000 | 198 | 66 | 4 | 20 | 185 | 24 | 220 | 1.44e-51 | 165 |
| MsG0480018693.01.T01 | AT3G04150 | 44.954 | 218 | 82 | 4 | 3 | 184 | 4 | 219 | 5.03e-51 | 164 |
| MsG0480018693.01.T01 | AT5G39160 | 46.789 | 218 | 61 | 4 | 1 | 185 | 1 | 196 | 5.42e-51 | 163 |
| MsG0480018693.01.T01 | AT5G39190 | 46.789 | 218 | 61 | 4 | 1 | 185 | 1 | 196 | 9.76e-51 | 162 |
| MsG0480018693.01.T01 | AT5G38940 | 48.980 | 196 | 67 | 4 | 22 | 185 | 26 | 220 | 1.15e-50 | 163 |
| MsG0480018693.01.T01 | AT5G38940 | 48.980 | 196 | 67 | 4 | 22 | 185 | 50 | 244 | 1.64e-50 | 163 |
| MsG0480018693.01.T01 | AT3G04170 | 45.192 | 208 | 76 | 4 | 10 | 184 | 14 | 216 | 1.50e-49 | 160 |
| MsG0480018693.01.T01 | AT3G04150 | 42.358 | 229 | 85 | 4 | 3 | 184 | 4 | 232 | 6.66e-49 | 159 |
| MsG0480018693.01.T01 | AT3G04190 | 45.050 | 202 | 76 | 3 | 15 | 183 | 19 | 218 | 7.42e-48 | 156 |
| MsG0480018693.01.T01 | AT5G38910 | 51.579 | 190 | 78 | 5 | 1 | 185 | 1 | 181 | 2.34e-46 | 151 |
| MsG0480018693.01.T01 | AT3G04180 | 44.059 | 202 | 78 | 3 | 15 | 183 | 19 | 218 | 3.91e-45 | 149 |
| MsG0480018693.01.T01 | AT1G02335 | 36.735 | 196 | 91 | 3 | 20 | 185 | 22 | 214 | 4.70e-33 | 118 |
| MsG0480018693.01.T01 | AT3G62020 | 36.493 | 211 | 99 | 5 | 6 | 185 | 8 | 214 | 6.34e-32 | 115 |
| MsG0480018693.01.T01 | AT3G05930 | 38.308 | 201 | 89 | 4 | 3 | 172 | 5 | 201 | 1.46e-29 | 108 |
| MsG0480018693.01.T01 | AT1G09560 | 35.176 | 199 | 96 | 4 | 17 | 185 | 19 | 214 | 1.59e-29 | 108 |
| MsG0480018693.01.T01 | AT1G18970 | 37.879 | 198 | 88 | 5 | 18 | 185 | 25 | 217 | 2.08e-29 | 108 |
| MsG0480018693.01.T01 | AT1G18980 | 37.000 | 200 | 87 | 5 | 18 | 185 | 25 | 217 | 2.00e-28 | 106 |
| MsG0480018693.01.T01 | AT1G10460 | 34.872 | 195 | 95 | 5 | 22 | 184 | 19 | 213 | 5.37e-28 | 105 |
| MsG0480018693.01.T01 | AT3G10080 | 32.663 | 199 | 101 | 4 | 18 | 185 | 22 | 218 | 1.40e-27 | 103 |
| MsG0480018693.01.T01 | AT3G10080 | 32.663 | 199 | 101 | 4 | 18 | 185 | 93 | 289 | 4.45e-27 | 104 |
| MsG0480018693.01.T01 | AT3G62020 | 36.782 | 174 | 79 | 3 | 43 | 185 | 12 | 185 | 5.41e-26 | 99.0 |
| MsG0480018693.01.T01 | AT5G26700 | 36.842 | 190 | 80 | 6 | 26 | 183 | 25 | 206 | 7.26e-26 | 99.4 |
| MsG0480018693.01.T01 | AT5G61750 | 35.754 | 179 | 84 | 4 | 6 | 154 | 3 | 180 | 4.41e-25 | 97.1 |
| MsG0480018693.01.T01 | AT5G20630 | 35.577 | 208 | 96 | 7 | 1 | 178 | 1 | 200 | 2.55e-24 | 95.1 |
| MsG0480018693.01.T01 | AT5G38950 | 54.167 | 72 | 33 | 0 | 115 | 186 | 2 | 73 | 4.29e-19 | 78.6 |
| MsG0480018693.01.T01 | AT1G72610 | 33.333 | 189 | 89 | 7 | 26 | 183 | 19 | 201 | 2.03e-18 | 79.7 |
| MsG0480018693.01.T01 | AT1G74820 | 31.088 | 193 | 96 | 5 | 24 | 185 | 38 | 224 | 6.39e-18 | 79.0 |
| MsG0480018693.01.T01 | AT5G39100 | 68.627 | 51 | 15 | 1 | 7 | 57 | 9 | 58 | 2.31e-14 | 65.1 |
Find 45 sgRNAs with CRISPR-Local
Find 69 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATATACATACCACCATCTT+TGG | 0.268514 | 4:-8683141 | None:intergenic |
| TTTCAACTGAATGTGGGATA+TGG | 0.310660 | 4:+8683749 | MsG0480018693.01.T01:CDS |
| CCTTGTTAGCATCTTGGCTT+TGG | 0.311083 | 4:+8683053 | MsG0480018693.01.T01:CDS |
| TTGAGATCCTAGTGCATTAG+AGG | 0.333822 | 4:-8683478 | None:intergenic |
| CTTATCCACTTGAAAAGCTT+TGG | 0.335788 | 4:-8683876 | None:intergenic |
| TAACACGCTTGGTATATCTT+TGG | 0.340502 | 4:+8683536 | MsG0480018693.01.T01:CDS |
| TGAAAATGAATAAGACCAAT+TGG | 0.356438 | 4:-8683731 | None:intergenic |
| ATACTTCCTTGTTAGCATCT+TGG | 0.361887 | 4:+8683047 | MsG0480018693.01.T01:CDS |
| TTCTTCAAACATGTTGAAGC+TGG | 0.402098 | 4:+8683450 | MsG0480018693.01.T01:CDS |
| GGCAACGCTGTTGCTATTGC+TGG | 0.409649 | 4:+8683770 | MsG0480018693.01.T01:CDS |
| GATGTGTTTGTGTTCCCAAT+TGG | 0.424230 | 4:+8683716 | MsG0480018693.01.T01:CDS |
| CAAAAGTCTTGGAGAGGGCT+AGG | 0.434671 | 4:-8683102 | None:intergenic |
| TAATTTGCAGTATTCGTGAA+TGG | 0.437869 | 4:+8683387 | MsG0480018693.01.T01:intron |
| ATTATCTTCAAAAGCAGTCT+TGG | 0.442184 | 4:+8683909 | MsG0480018693.01.T01:CDS |
| TCTTCAGCTTTAACAAGTGC+GGG | 0.444792 | 4:-8683426 | None:intergenic |
| GTCACTGTAGACCAACTATT+CGG | 0.446134 | 4:+8683510 | MsG0480018693.01.T01:CDS |
| TCAACAAACAAGACAACAAC+CGG | 0.455818 | 4:+8683666 | MsG0480018693.01.T01:intron |
| ATATACATACCACCATCTTT+GGG | 0.456939 | 4:-8683140 | None:intergenic |
| TTTGCAACGGTGATAACTCC+TGG | 0.470922 | 4:-8683809 | None:intergenic |
| TGATTGCAACACAAAAGTCT+TGG | 0.490396 | 4:-8683113 | None:intergenic |
| AATTTGCAGTATTCGTGAAT+GGG | 0.491761 | 4:+8683388 | MsG0480018693.01.T01:intron |
| TCTTCAAACATGTTGAAGCT+GGG | 0.501315 | 4:+8683451 | MsG0480018693.01.T01:CDS |
| CTATTCGGACTTAACACGCT+TGG | 0.510323 | 4:+8683525 | MsG0480018693.01.T01:CDS |
| GAAAATGAATAAGACCAATT+GGG | 0.510497 | 4:-8683730 | None:intergenic |
| AGAACTTCGTCGGAAATAAG+AGG | 0.511108 | 4:-8683851 | None:intergenic |
| AATAGTTGGTCTACAGTGAC+TGG | 0.527501 | 4:-8683507 | None:intergenic |
| GCGTGTTAAGTCCGAATAGT+TGG | 0.534502 | 4:-8683521 | None:intergenic |
| ATCTTCAGCTTTAACAAGTG+CGG | 0.543612 | 4:-8683427 | None:intergenic |
| CTTTACCAAGGTGCTCAACA+AGG | 0.544491 | 4:+8683691 | MsG0480018693.01.T01:CDS |
| AGCTTTGGTAAGAACTTCGT+CGG | 0.555884 | 4:-8683861 | None:intergenic |
| CCAAAGCCAAGATGCTAACA+AGG | 0.556137 | 4:-8683053 | None:intergenic |
| AAAAGTCTTGGAGAGGGCTA+GGG | 0.564154 | 4:-8683101 | None:intergenic |
| ATCACCCTTGTTGAGCACCT+TGG | 0.567836 | 4:-8683696 | None:intergenic |
| GGACTTAGCAGTCAAAATCC+AGG | 0.578792 | 4:+8683791 | MsG0480018693.01.T01:CDS |
| TGAGCACCTTGGTAAAGAGC+CGG | 0.579420 | 4:-8683685 | None:intergenic |
| TGCAATCAAAGACCCAAAGA+TGG | 0.581392 | 4:+8683128 | MsG0480018693.01.T01:CDS |
| GGGAATGCCTCTAATGCACT+AGG | 0.589101 | 4:+8683471 | MsG0480018693.01.T01:CDS |
| TTTAAACAAAGCATTTGCAA+CGG | 0.590900 | 4:-8683822 | None:intergenic |
| AGGGCTAGGGTCATAAGCAA+AGG | 0.622370 | 4:-8683088 | None:intergenic |
| CAACACAAAAGTCTTGGAGA+GGG | 0.641422 | 4:-8683107 | None:intergenic |
| GCAACACAAAAGTCTTGGAG+AGG | 0.651085 | 4:-8683108 | None:intergenic |
| AATCAAAGACCCAAAGATGG+TGG | 0.659113 | 4:+8683131 | MsG0480018693.01.T01:CDS |
| CTTCAGCTTTAACAAGTGCG+GGG | 0.662073 | 4:-8683425 | None:intergenic |
| TTTACCAAGGTGCTCAACAA+GGG | 0.669433 | 4:+8683692 | MsG0480018693.01.T01:CDS |
| CAACAACCGGCTCTTTACCA+AGG | 0.674974 | 4:+8683679 | MsG0480018693.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTCAATAAATATATTTTA+TGG | + | Chr4:8683244-8683263 | MsG0480018693.01.T01:intron | 10.0% |
| !! | TAAAATGTTTGATATTTGTA+AGG | - | Chr4:8683219-8683238 | None:intergenic | 15.0% |
| !!! | TTAATTACTACTCAATTTTT+AGG | + | Chr4:8683175-8683194 | MsG0480018693.01.T01:intron | 15.0% |
| !!! | ATGTATAGAATCTTTTGTTT+TGG | + | Chr4:8683280-8683299 | MsG0480018693.01.T01:intron | 20.0% |
| ! | GAAAATGAATAAGACCAATT+GGG | - | Chr4:8683733-8683752 | None:intergenic | 25.0% |
| ! | TGAAAATGAATAAGACCAAT+TGG | - | Chr4:8683734-8683753 | None:intergenic | 25.0% |
| ! | TGAGTAGTAATTAAGACTTA+AGG | - | Chr4:8683169-8683188 | None:intergenic | 25.0% |
| !! | ATTCATTTTCAACTGAATGT+GGG | + | Chr4:8683743-8683762 | MsG0480018693.01.T01:CDS | 25.0% |
| !! | TATTCATTTTCAACTGAATG+TGG | + | Chr4:8683742-8683761 | MsG0480018693.01.T01:CDS | 25.0% |
| !! | TTTAAACAAAGCATTTGCAA+CGG | - | Chr4:8683825-8683844 | None:intergenic | 25.0% |
| AATTTGCAGTATTCGTGAAT+GGG | + | Chr4:8683388-8683407 | MsG0480018693.01.T01:intron | 30.0% | |
| ATATACATACCACCATCTTT+GGG | - | Chr4:8683143-8683162 | None:intergenic | 30.0% | |
| ATTATCTTCAAAAGCAGTCT+TGG | + | Chr4:8683909-8683928 | MsG0480018693.01.T01:CDS | 30.0% | |
| TATATACATACCACCATCTT+TGG | - | Chr4:8683144-8683163 | None:intergenic | 30.0% | |
| ! | TAATTTGCAGTATTCGTGAA+TGG | + | Chr4:8683387-8683406 | MsG0480018693.01.T01:intron | 30.0% |
| ATACTTCCTTGTTAGCATCT+TGG | + | Chr4:8683047-8683066 | MsG0480018693.01.T01:CDS | 35.0% | |
| CTTATCCACTTGAAAAGCTT+TGG | - | Chr4:8683879-8683898 | None:intergenic | 35.0% | |
| TAACACGCTTGGTATATCTT+TGG | + | Chr4:8683536-8683555 | MsG0480018693.01.T01:CDS | 35.0% | |
| TCAACAAACAAGACAACAAC+CGG | + | Chr4:8683666-8683685 | MsG0480018693.01.T01:intron | 35.0% | |
| TCTTCAAACATGTTGAAGCT+GGG | + | Chr4:8683451-8683470 | MsG0480018693.01.T01:CDS | 35.0% | |
| TGATTGCAACACAAAAGTCT+TGG | - | Chr4:8683116-8683135 | None:intergenic | 35.0% | |
| TTCTTCAAACATGTTGAAGC+TGG | + | Chr4:8683450-8683469 | MsG0480018693.01.T01:CDS | 35.0% | |
| TTTCAACTGAATGTGGGATA+TGG | + | Chr4:8683749-8683768 | MsG0480018693.01.T01:CDS | 35.0% | |
| ! | ATCTTCAGCTTTAACAAGTG+CGG | - | Chr4:8683430-8683449 | None:intergenic | 35.0% |
| !! | TCTTACCAAAGCTTTTCAAG+TGG | + | Chr4:8683871-8683890 | MsG0480018693.01.T01:CDS | 35.0% |
| AATCAAAGACCCAAAGATGG+TGG | + | Chr4:8683131-8683150 | MsG0480018693.01.T01:CDS | 40.0% | |
| AGAACTTCGTCGGAAATAAG+AGG | - | Chr4:8683854-8683873 | None:intergenic | 40.0% | |
| ATAAGGATCTCTGTTCCTCT+AGG | - | Chr4:8683609-8683628 | None:intergenic | 40.0% | |
| CAACACAAAAGTCTTGGAGA+GGG | - | Chr4:8683110-8683129 | None:intergenic | 40.0% | |
| GAGATCCTTATAGTACTCGA+AGG | + | Chr4:8683618-8683637 | MsG0480018693.01.T01:intron | 40.0% | |
| GATGTGTTTGTGTTCCCAAT+TGG | + | Chr4:8683716-8683735 | MsG0480018693.01.T01:CDS | 40.0% | |
| GTCACTGTAGACCAACTATT+CGG | + | Chr4:8683510-8683529 | MsG0480018693.01.T01:CDS | 40.0% | |
| TAAGGATCTCTGTTCCTCTA+GGG | - | Chr4:8683608-8683627 | None:intergenic | 40.0% | |
| TGCAATCAAAGACCCAAAGA+TGG | + | Chr4:8683128-8683147 | MsG0480018693.01.T01:CDS | 40.0% | |
| TTGAGATCCTAGTGCATTAG+AGG | - | Chr4:8683481-8683500 | None:intergenic | 40.0% | |
| ! | AATAGTTGGTCTACAGTGAC+TGG | - | Chr4:8683510-8683529 | None:intergenic | 40.0% |
| ! | AGCTTTGGTAAGAACTTCGT+CGG | - | Chr4:8683864-8683883 | None:intergenic | 40.0% |
| ! | TCTTCAGCTTTAACAAGTGC+GGG | - | Chr4:8683429-8683448 | None:intergenic | 40.0% |
| ! | TTTACCAAGGTGCTCAACAA+GGG | + | Chr4:8683692-8683711 | MsG0480018693.01.T01:CDS | 40.0% |
| AAAAGTCTTGGAGAGGGCTA+GGG | - | Chr4:8683104-8683123 | None:intergenic | 45.0% | |
| AGCTAAACCAGCAATCACTG+AGG | - | Chr4:8683307-8683326 | None:intergenic | 45.0% | |
| CCAAAGCCAAGATGCTAACA+AGG | - | Chr4:8683056-8683075 | None:intergenic | 45.0% | |
| CCTTGTTAGCATCTTGGCTT+TGG | + | Chr4:8683053-8683072 | MsG0480018693.01.T01:CDS | 45.0% | |
| CTATTCGGACTTAACACGCT+TGG | + | Chr4:8683525-8683544 | MsG0480018693.01.T01:CDS | 45.0% | |
| GAGTGCCTTCGAGTACTATA+AGG | - | Chr4:8683626-8683645 | None:intergenic | 45.0% | |
| GCAACACAAAAGTCTTGGAG+AGG | - | Chr4:8683111-8683130 | None:intergenic | 45.0% | |
| GCGTGTTAAGTCCGAATAGT+TGG | - | Chr4:8683524-8683543 | None:intergenic | 45.0% | |
| GGACTTAGCAGTCAAAATCC+AGG | + | Chr4:8683791-8683810 | MsG0480018693.01.T01:CDS | 45.0% | |
| TTTGCAACGGTGATAACTCC+TGG | - | Chr4:8683812-8683831 | None:intergenic | 45.0% | |
| ! | CTTCAGCTTTAACAAGTGCG+GGG | - | Chr4:8683428-8683447 | None:intergenic | 45.0% |
| ! | CTTTACCAAGGTGCTCAACA+AGG | + | Chr4:8683691-8683710 | MsG0480018693.01.T01:CDS | 45.0% |
| ! | TGAGGTGGGTTTAAACCCTT+AGG | - | Chr4:8683579-8683598 | None:intergenic | 45.0% |
| ! | TTTTGGTCCTCAGTGATTGC+TGG | + | Chr4:8683297-8683316 | MsG0480018693.01.T01:intron | 45.0% |
| !! | CAGTGATTGCTGGTTTAGCT+AGG | + | Chr4:8683307-8683326 | MsG0480018693.01.T01:intron | 45.0% |
| !! | CTCGAAGGCACTCTTTATGT+TGG | + | Chr4:8683633-8683652 | MsG0480018693.01.T01:intron | 45.0% |
| AGGGCTAGGGTCATAAGCAA+AGG | - | Chr4:8683091-8683110 | None:intergenic | 50.0% | |
| ATCACCCTTGTTGAGCACCT+TGG | - | Chr4:8683699-8683718 | None:intergenic | 50.0% | |
| CAAAAGTCTTGGAGAGGGCT+AGG | - | Chr4:8683105-8683124 | None:intergenic | 50.0% | |
| GGGAATGCCTCTAATGCACT+AGG | + | Chr4:8683471-8683490 | MsG0480018693.01.T01:CDS | 50.0% | |
| TGAGCACCTTGGTAAAGAGC+CGG | - | Chr4:8683688-8683707 | None:intergenic | 50.0% | |
| ! | CAACAACCGGCTCTTTACCA+AGG | + | Chr4:8683679-8683698 | MsG0480018693.01.T01:CDS | 50.0% |
| !!! | CGCGTTGATTTTGCGCCTAA+GGG | + | Chr4:8683561-8683580 | MsG0480018693.01.T01:CDS | 50.0% |
| !!! | TCGCGTTGATTTTGCGCCTA+AGG | + | Chr4:8683560-8683579 | MsG0480018693.01.T01:CDS | 50.0% |
| ! | GGATCTCTGTTCCTCTAGGG+TGG | - | Chr4:8683605-8683624 | None:intergenic | 55.0% |
| ! | GGCAACGCTGTTGCTATTGC+TGG | + | Chr4:8683770-8683789 | MsG0480018693.01.T01:CDS | 55.0% |
| !! | CTCTAGGGTGGATGTGAGGT+GGG | - | Chr4:8683593-8683612 | None:intergenic | 55.0% |
| !! | GTTCCTCTAGGGTGGATGTG+AGG | - | Chr4:8683597-8683616 | None:intergenic | 55.0% |
| CCACCTCACATCCACCCTAG+AGG | + | Chr4:8683591-8683610 | MsG0480018693.01.T01:intron | 60.0% | |
| !! | CCTCTAGGGTGGATGTGAGG+TGG | - | Chr4:8683594-8683613 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 8683036 | 8683946 | 8683036 | ID=MsG0480018693.01;Name=MsG0480018693.01 |
| Chr4 | mRNA | 8683036 | 8683946 | 8683036 | ID=MsG0480018693.01.T01;Parent=MsG0480018693.01;Name=MsG0480018693.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|1|3|0|191 |
| Chr4 | exon | 8683036 | 8683156 | 8683036 | ID=MsG0480018693.01.T01:exon:2049;Parent=MsG0480018693.01.T01 |
| Chr4 | exon | 8683397 | 8683582 | 8683397 | ID=MsG0480018693.01.T01:exon:2050;Parent=MsG0480018693.01.T01 |
| Chr4 | exon | 8683678 | 8683946 | 8683678 | ID=MsG0480018693.01.T01:exon:2051;Parent=MsG0480018693.01.T01 |
| Chr4 | CDS | 8683036 | 8683156 | 8683036 | ID=MsG0480018693.01.T01:cds;Parent=MsG0480018693.01.T01 |
| Chr4 | CDS | 8683397 | 8683582 | 8683397 | ID=MsG0480018693.01.T01:cds;Parent=MsG0480018693.01.T01 |
| Chr4 | CDS | 8683678 | 8683946 | 8683678 | ID=MsG0480018693.01.T01:cds;Parent=MsG0480018693.01.T01 |
| Gene Sequence |
| Protein sequence |
