Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043997.01.T01 | XP_003628215.2 | 83.548 | 389 | 34 | 1 | 7 | 395 | 5 | 363 | 0 | 649 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043997.01.T01 | P21745 | 64.474 | 152 | 53 | 1 | 232 | 382 | 108 | 259 | 3.59E-65 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043997.01.T01 | G7L8G7 | 83.548 | 389 | 34 | 1 | 7 | 395 | 5 | 363 | 0.0 | 649 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180001800.01 | MsG0880043997.01 | 0.834208 | 3.424000e-56 | 4.035025e-53 |
| MsG0180002255.01 | MsG0880043997.01 | 0.809784 | 1.594689e-50 | 9.449615e-48 |
| MsG0880043997.01 | MsG0880044001.01 | 0.813818 | 2.111541e-51 | 1.393204e-48 |
| MsG0880043997.01 | MsG0880044026.01 | 0.898906 | 3.351556e-77 | 4.045309e-73 |
| MsG0880043997.01 | MsG0880044028.01 | 0.810537 | 1.097162e-50 | 6.630850e-48 |
| MsG0880043997.01 | MsG0880045801.01 | 0.806594 | 7.625287e-50 | 4.155198e-47 |
| MsG0880043997.01 | MsG0880046038.01 | 0.828012 | 1.139009e-54 | 1.118230e-51 |
| MsG0880043997.01 | MsG0880046870.01 | 0.809185 | 2.144355e-50 | 1.250566e-47 |
| MsG0880043997.01 | MsG0880047460.01 | 0.855971 | 4.409786e-62 | 1.036251e-58 |
| MsG0180003237.01 | MsG0880043997.01 | 0.865810 | 4.506157e-65 | 1.485549e-61 |
| MsG0180004059.01 | MsG0880043997.01 | 0.800044 | 1.733480e-48 | 7.991153e-46 |
| MsG0180004424.01 | MsG0880043997.01 | 0.808921 | 2.441601e-50 | 1.413825e-47 |
| MsG0180005130.01 | MsG0880043997.01 | 0.822482 | 2.314120e-53 | 1.939367e-50 |
| MsG0180005143.01 | MsG0880043997.01 | 0.823633 | 1.247228e-53 | 1.079884e-50 |
| MsG0180005146.01 | MsG0880043997.01 | 0.803486 | 3.406892e-49 | 1.714184e-46 |
| MsG0780040615.01 | MsG0880043997.01 | 0.828392 | 9.220826e-55 | 9.153323e-52 |
| MsG0880043459.01 | MsG0880043997.01 | 0.833165 | 6.236747e-56 | 7.124214e-53 |
| MsG0280011292.01 | MsG0880043997.01 | 0.821451 | 4.010065e-53 | 3.263509e-50 |
| MsG0380013212.01 | MsG0880043997.01 | 0.814017 | 1.908078e-51 | 1.265811e-48 |
| MsG0380013213.01 | MsG0880043997.01 | 0.820826 | 5.587218e-53 | 4.468814e-50 |
| MsG0380014344.01 | MsG0880043997.01 | 0.806490 | 8.022574e-50 | 4.360198e-47 |
| MsG0680031200.01 | MsG0880043997.01 | 0.800611 | 1.328622e-48 | 6.213639e-46 |
| MsG0680032026.01 | MsG0880043997.01 | 0.826409 | 2.755605e-54 | 2.582294e-51 |
| MsG0680032461.01 | MsG0880043997.01 | 0.840614 | 7.821304e-58 | 1.120121e-54 |
| MsG0680034974.01 | MsG0880043997.01 | 0.830654 | 2.599557e-55 | 2.756268e-52 |
| MsG0680034978.01 | MsG0880043997.01 | 0.817335 | 3.477964e-52 | 2.525721e-49 |
| MsG0480018692.01 | MsG0880043997.01 | 0.835109 | 2.032177e-56 | 2.460401e-53 |
| MsG0480018693.01 | MsG0880043997.01 | 0.855001 | 8.451163e-62 | 1.923015e-58 |
| MsG0480018697.01 | MsG0880043997.01 | 0.856259 | 3.629685e-62 | 8.611092e-59 |
| MsG0480019301.01 | MsG0880043997.01 | 0.820780 | 5.723738e-53 | 4.572082e-50 |
| MsG0480019322.01 | MsG0880043997.01 | 0.804661 | 1.941147e-49 | 1.006626e-46 |
| MsG0480019346.01 | MsG0880043997.01 | 0.826634 | 2.435574e-54 | 2.296902e-51 |
| MsG0480019348.01 | MsG0880043997.01 | 0.851448 | 8.817983e-61 | 1.785414e-57 |
| MsG0480020285.01 | MsG0880043997.01 | 0.800495 | 1.403049e-48 | 6.542448e-46 |
| MsG0480021133.01 | MsG0880043997.01 | 0.804886 | 1.741807e-49 | 9.086250e-47 |
| MsG0580025024.01 | MsG0880043997.01 | 0.810064 | 1.387879e-50 | 8.284512e-48 |
| MsG0580025524.01 | MsG0880043997.01 | 0.800957 | 1.129501e-48 | 5.329211e-46 |
| MsG0580025961.01 | MsG0880043997.01 | 0.802032 | 6.798719e-49 | 3.296093e-46 |
| MsG0580025965.01 | MsG0880043997.01 | 0.823202 | 1.572194e-53 | 1.344723e-50 |
| MsG0380015659.01 | MsG0880043997.01 | 0.832844 | 7.498212e-56 | 8.482457e-53 |
| MsG0380016299.01 | MsG0880043997.01 | 0.801382 | 9.243033e-49 | 4.407964e-46 |
| MsG0380016458.01 | MsG0880043997.01 | 0.825936 | 3.571594e-54 | 3.302177e-51 |
| MsG0380017694.01 | MsG0880043997.01 | 0.831566 | 1.551994e-55 | 1.690729e-52 |
| MsG0580026148.01 | MsG0880043997.01 | 0.803363 | 3.613760e-49 | 1.812377e-46 |
| MsG0580026521.01 | MsG0880043997.01 | 0.804925 | 1.709589e-49 | 8.926802e-47 |
| MsG0580027751.01 | MsG0880043997.01 | 0.853070 | 3.046685e-61 | 6.501556e-58 |
| MsG0580027752.01 | MsG0880043997.01 | 0.809959 | 1.462017e-50 | 8.703223e-48 |
| MsG0580027753.01 | MsG0880043997.01 | 0.817849 | 2.664231e-52 | 1.962245e-49 |
| MsG0580029291.01 | MsG0880043997.01 | 0.804405 | 2.194541e-49 | 1.130519e-46 |
| MsG0580029937.01 | MsG0880043997.01 | 0.801036 | 1.088206e-48 | 5.144734e-46 |
| MsG0580029938.01 | MsG0880043997.01 | 0.800535 | 1.377014e-48 | 6.427469e-46 |
| MsG0680030379.01 | MsG0880043997.01 | 0.824332 | 8.546866e-54 | 7.547192e-51 |
| MsG0680030380.01 | MsG0880043997.01 | 0.829250 | 5.717901e-55 | 5.820582e-52 |
| MsG0680030382.01 | MsG0880043997.01 | 0.824411 | 8.190023e-54 | 7.248271e-51 |
| MsG0280007670.01 | MsG0880043997.01 | 0.804434 | 2.164230e-49 | 1.115749e-46 |
| MsG0280007677.01 | MsG0880043997.01 | 0.868128 | 8.218351e-66 | 2.940171e-62 |
| MsG0280007869.01 | MsG0880043997.01 | 0.831000 | 2.139393e-55 | 2.291653e-52 |
| MsG0280008180.01 | MsG0880043997.01 | 0.804351 | 2.252110e-49 | 1.158612e-46 |
| MsG0280010425.01 | MsG0880043997.01 | 0.804742 | 1.866327e-49 | 9.699472e-47 |
| MsG0780035932.01 | MsG0880043997.01 | 0.826674 | 2.382873e-54 | 2.249777e-51 |
| MsG0780036208.01 | MsG0880043997.01 | 0.814380 | 1.587166e-51 | 1.063324e-48 |
| MsG0780036376.01 | MsG0880043997.01 | 0.805644 | 1.208310e-49 | 6.426630e-47 |
| MsG0780036649.01 | MsG0880043997.01 | 0.830323 | 3.132237e-55 | 3.289086e-52 |
| MsG0780036839.01 | MsG0880043997.01 | 0.814507 | 1.487222e-51 | 9.998512e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043997.01.T01 | MTR_8g045880 | 83.548 | 389 | 34 | 1 | 7 | 395 | 5 | 363 | 0.0 | 649 |
| MsG0880043997.01.T01 | MTR_8g045880 | 84.737 | 380 | 28 | 1 | 16 | 395 | 16 | 365 | 0.0 | 641 |
| MsG0880043997.01.T01 | MTR_8g045880 | 84.078 | 358 | 27 | 1 | 38 | 395 | 1 | 328 | 0.0 | 597 |
| MsG0880043997.01.T01 | MTR_8g445170 | 54.680 | 406 | 164 | 6 | 1 | 395 | 1 | 397 | 4.14e-144 | 415 |
| MsG0880043997.01.T01 | MTR_8g445140 | 50.678 | 369 | 111 | 5 | 14 | 382 | 6 | 303 | 6.19e-122 | 355 |
| MsG0880043997.01.T01 | MTR_8g045890 | 58.117 | 308 | 110 | 4 | 102 | 395 | 143 | 445 | 1.45e-115 | 344 |
| MsG0880043997.01.T01 | MTR_8g045890 | 40.000 | 130 | 63 | 3 | 79 | 201 | 1 | 122 | 4.81e-17 | 82.8 |
| MsG0880043997.01.T01 | MTR_8g045890 | 58.117 | 308 | 110 | 4 | 102 | 395 | 184 | 486 | 8.66e-115 | 343 |
| MsG0880043997.01.T01 | MTR_8g045890 | 50.877 | 171 | 69 | 3 | 38 | 201 | 1 | 163 | 7.56e-37 | 140 |
| MsG0880043997.01.T01 | MTR_8g045890 | 58.117 | 308 | 110 | 4 | 102 | 395 | 221 | 523 | 2.58e-114 | 343 |
| MsG0880043997.01.T01 | MTR_8g045890 | 56.731 | 208 | 75 | 3 | 1 | 201 | 1 | 200 | 8.36e-61 | 205 |
| MsG0880043997.01.T01 | MTR_8g044290 | 48.424 | 349 | 146 | 6 | 14 | 355 | 19 | 340 | 1.48e-103 | 314 |
| MsG0880043997.01.T01 | MTR_8g046000 | 66.857 | 175 | 56 | 1 | 221 | 395 | 64 | 236 | 1.98e-80 | 247 |
| MsG0880043997.01.T01 | MTR_1g045860 | 61.818 | 165 | 58 | 2 | 232 | 395 | 109 | 269 | 2.14e-69 | 220 |
| MsG0880043997.01.T01 | MTR_1g045860 | 60.714 | 84 | 31 | 2 | 1 | 82 | 1 | 84 | 8.80e-27 | 108 |
| MsG0880043997.01.T01 | MTR_2g081610 | 54.667 | 150 | 67 | 1 | 234 | 382 | 111 | 260 | 4.31e-55 | 183 |
| MsG0880043997.01.T01 | MTR_2g081610 | 39.175 | 97 | 53 | 3 | 1 | 91 | 1 | 97 | 3.74e-12 | 66.6 |
| MsG0880043997.01.T01 | MTR_2g081770 | 54.605 | 152 | 66 | 2 | 234 | 382 | 120 | 271 | 2.60e-54 | 181 |
| MsG0880043997.01.T01 | MTR_2g081590 | 52.318 | 151 | 69 | 2 | 234 | 382 | 111 | 260 | 1.62e-49 | 168 |
| MsG0880043997.01.T01 | MTR_2g081590 | 39.175 | 97 | 53 | 3 | 1 | 91 | 1 | 97 | 6.04e-11 | 63.2 |
| MsG0880043997.01.T01 | MTR_1g008500 | 30.508 | 413 | 224 | 17 | 1 | 380 | 1 | 383 | 3.75e-35 | 133 |
| MsG0880043997.01.T01 | MTR_1g008470 | 45.390 | 141 | 72 | 4 | 244 | 379 | 157 | 297 | 1.85e-34 | 129 |
| MsG0880043997.01.T01 | MTR_3g109490 | 38.919 | 185 | 98 | 5 | 212 | 381 | 137 | 321 | 3.68e-33 | 126 |
| MsG0880043997.01.T01 | MTR_1g008460 | 44.366 | 142 | 74 | 4 | 243 | 379 | 153 | 294 | 3.69e-33 | 126 |
| MsG0880043997.01.T01 | MTR_1g008590 | 42.759 | 145 | 77 | 4 | 242 | 380 | 179 | 323 | 3.70e-31 | 121 |
| MsG0880043997.01.T01 | MTR_0312s0030 | 42.759 | 145 | 77 | 4 | 242 | 380 | 179 | 323 | 4.18e-31 | 121 |
| MsG0880043997.01.T01 | MTR_1g007520 | 42.759 | 145 | 77 | 4 | 242 | 380 | 179 | 323 | 4.18e-31 | 121 |
| MsG0880043997.01.T01 | MTR_1g008580 | 41.216 | 148 | 80 | 4 | 242 | 382 | 25 | 172 | 2.98e-30 | 114 |
| MsG0880043997.01.T01 | MTR_1g008530 | 41.096 | 146 | 79 | 4 | 242 | 380 | 77 | 222 | 3.48e-30 | 116 |
| MsG0880043997.01.T01 | MTR_1g008560 | 41.096 | 146 | 79 | 4 | 242 | 380 | 183 | 328 | 7.47e-29 | 115 |
| MsG0880043997.01.T01 | MTR_1g008510 | 41.096 | 146 | 79 | 4 | 242 | 380 | 179 | 324 | 1.20e-28 | 114 |
| MsG0880043997.01.T01 | MTR_1g008450 | 41.259 | 143 | 79 | 4 | 242 | 379 | 168 | 310 | 4.03e-27 | 110 |
| MsG0880043997.01.T01 | MTR_3g116380 | 37.415 | 147 | 83 | 5 | 244 | 381 | 156 | 302 | 3.43e-19 | 87.8 |
| MsG0880043997.01.T01 | MTR_3g107830 | 33.108 | 148 | 89 | 4 | 244 | 381 | 108 | 255 | 2.47e-17 | 81.6 |
| MsG0880043997.01.T01 | MTR_4g069680 | 35.811 | 148 | 85 | 5 | 244 | 381 | 139 | 286 | 2.87e-17 | 82.0 |
| MsG0880043997.01.T01 | MTR_4g069570 | 35.333 | 150 | 85 | 7 | 244 | 381 | 186 | 335 | 4.68e-17 | 82.0 |
| MsG0880043997.01.T01 | MTR_3g116270 | 33.108 | 148 | 89 | 5 | 244 | 381 | 358 | 505 | 1.43e-16 | 81.6 |
| MsG0880043997.01.T01 | MTR_3g116410 | 35.135 | 148 | 86 | 5 | 244 | 381 | 128 | 275 | 3.15e-16 | 79.0 |
| MsG0880043997.01.T01 | MTR_3g116320 | 32.624 | 141 | 85 | 5 | 251 | 381 | 547 | 687 | 1.70e-15 | 79.0 |
| MsG0880043997.01.T01 | MTR_4g069550 | 33.333 | 150 | 88 | 6 | 244 | 381 | 313 | 462 | 7.70e-15 | 76.3 |
| MsG0880043997.01.T01 | MTR_8g064500 | 30.588 | 170 | 106 | 5 | 218 | 379 | 205 | 370 | 1.67e-14 | 74.7 |
| MsG0880043997.01.T01 | MTR_4g069040 | 33.333 | 150 | 88 | 8 | 244 | 381 | 360 | 509 | 6.92e-14 | 73.6 |
| MsG0880043997.01.T01 | MTR_8g064560 | 28.042 | 189 | 125 | 6 | 204 | 383 | 441 | 627 | 3.49e-13 | 71.6 |
| MsG0880043997.01.T01 | MTR_4g133840 | 29.012 | 162 | 105 | 5 | 231 | 383 | 30 | 190 | 6.17e-13 | 67.4 |
| MsG0880043997.01.T01 | MTR_8g064530 | 27.660 | 188 | 127 | 5 | 204 | 383 | 458 | 644 | 1.88e-12 | 69.3 |
| MsG0880043997.01.T01 | MTR_5g034320 | 29.730 | 148 | 96 | 4 | 244 | 383 | 483 | 630 | 2.40e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043997.01.T01 | AT5G25610 | 41.667 | 144 | 76 | 4 | 244 | 379 | 246 | 389 | 3.30e-29 | 117 |
| MsG0880043997.01.T01 | AT1G70370 | 31.757 | 148 | 93 | 4 | 244 | 383 | 479 | 626 | 3.51e-15 | 77.8 |
| MsG0880043997.01.T01 | AT1G70370 | 31.757 | 148 | 93 | 4 | 244 | 383 | 479 | 626 | 3.51e-15 | 77.8 |
| MsG0880043997.01.T01 | AT1G49320 | 32.026 | 153 | 89 | 6 | 243 | 380 | 126 | 278 | 5.70e-14 | 72.0 |
| MsG0880043997.01.T01 | AT1G23760 | 31.126 | 151 | 90 | 5 | 244 | 383 | 475 | 622 | 5.20e-13 | 70.9 |
| MsG0880043997.01.T01 | AT1G60390 | 31.507 | 146 | 92 | 5 | 242 | 379 | 475 | 620 | 1.72e-12 | 69.3 |
Find 79 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCAAACCAAATGATAATTT+TGG | 0.089447 | 8:-34100550 | MsG0880043997.01.T01:CDS |
| GTTGAACATCTGAATGTTTA+TGG | 0.183060 | 8:+34100770 | None:intergenic |
| AGAACTTCATAGAGCATATT+AGG | 0.203878 | 8:+34099965 | None:intergenic |
| GATAAACCAAACGATAATAT+TGG | 0.268790 | 8:-34100460 | MsG0880043997.01.T01:CDS |
| AACTTCTGTAGCACATAAAT+TGG | 0.273421 | 8:-34100344 | MsG0880043997.01.T01:CDS |
| GTGGAGGAAGTGAGGAAAAT+AGG | 0.284501 | 8:-34100148 | MsG0880043997.01.T01:CDS |
| CCCAAAATTATCATTTGGTT+TGG | 0.316427 | 8:+34100549 | None:intergenic |
| TGGCAAACGGGGACAGTTCC+AGG | 0.325210 | 8:+34099932 | None:intergenic |
| CTAAATCAGGAGAAGAATAT+TGG | 0.350065 | 8:-34101915 | MsG0880043997.01.T01:CDS |
| TGGTTTGGCCATTTCTTCTT+CGG | 0.366788 | 8:+34100564 | None:intergenic |
| AGAATCCCAAAATTATCATT+TGG | 0.368127 | 8:+34100544 | None:intergenic |
| AAGAATATTGGAAATCTGTT+TGG | 0.378671 | 8:-34101903 | MsG0880043997.01.T01:CDS |
| GGAACCAGTGTGCCTATTAA+AGG | 0.380879 | 8:-34100868 | MsG0880043997.01.T01:CDS |
| AAAATCAAAGGGACATTTAC+CGG | 0.381905 | 8:-34100743 | MsG0880043997.01.T01:CDS |
| GCAAAAGCAAGTCAACCTTT+TGG | 0.382257 | 8:-34100667 | MsG0880043997.01.T01:CDS |
| ATTCTTTCCAAGCTTTGAAA+TGG | 0.382606 | 8:+34100219 | None:intergenic |
| TTCTCGTCTTGACCTTTAAT+AGG | 0.393806 | 8:+34100856 | None:intergenic |
| TTCACTTCTCCTACAGCTGA+TGG | 0.395859 | 8:+34100280 | None:intergenic |
| ATAATCCCAATATTATCGTT+TGG | 0.396432 | 8:+34100454 | None:intergenic |
| TCACTTCCTCCACCACATAT+TGG | 0.403058 | 8:+34100158 | None:intergenic |
| TACCTCAACTGAAGACGAAA+TGG | 0.408342 | 8:-34100482 | MsG0880043997.01.T01:CDS |
| TTCGAACATGACCTCTATCC+TGG | 0.409667 | 8:-34100814 | MsG0880043997.01.T01:CDS |
| GTCAAGACGAGAAGCAATAC+TGG | 0.411820 | 8:-34100846 | MsG0880043997.01.T01:CDS |
| ATAAACCAAACGATAATATT+GGG | 0.414213 | 8:-34100459 | MsG0880043997.01.T01:CDS |
| GTCCCCGTTTGCCATTTCAT+TGG | 0.423156 | 8:-34099923 | MsG0880043997.01.T01:CDS |
| CACCATATGTTAATTCCAAA+AGG | 0.424973 | 8:+34100652 | None:intergenic |
| TAGCTTTGTTGCCAATGAAA+TGG | 0.425489 | 8:+34099912 | None:intergenic |
| AAGTCGTTGTCGCGTTGATC+TGG | 0.430525 | 8:+34100068 | None:intergenic |
| CAAACCAACCGAAGAAGAAA+TGG | 0.432042 | 8:-34100572 | MsG0880043997.01.T01:CDS |
| TTGCCAATGAAATGGCAAAC+GGG | 0.434579 | 8:+34099920 | None:intergenic |
| TTGGCAACAAAGCTATTGCT+TGG | 0.442688 | 8:-34099904 | MsG0880043997.01.T01:CDS |
| GACTCACTCACAACATCGTT+GGG | 0.447876 | 8:+34099878 | None:intergenic |
| TTGAACATCTGAATGTTTAT+GGG | 0.455900 | 8:+34100771 | None:intergenic |
| GTCCCATTGGTGGCCTCTGA+TGG | 0.460470 | 8:-34100040 | MsG0880043997.01.T01:CDS |
| TTGGCCATTTCTTCTTCGGT+TGG | 0.465158 | 8:+34100568 | None:intergenic |
| GGGATCAATGGATCTAAATC+AGG | 0.468655 | 8:-34101928 | MsG0880043997.01.T01:CDS |
| CTTTCCGATCTGCTGCTGCC+CGG | 0.472173 | 8:-34101856 | MsG0880043997.01.T01:intron |
| TTGACTATAGTGGGGATCAA+TGG | 0.477898 | 8:-34101940 | MsG0880043997.01.T01:CDS |
| GTTGCCAATGAAATGGCAAA+CGG | 0.479257 | 8:+34099919 | None:intergenic |
| CACATTCTTCACAGCTATTG+TGG | 0.482566 | 8:-34100307 | MsG0880043997.01.T01:CDS |
| TCACTTCTCCTACAGCTGAT+GGG | 0.489475 | 8:+34100281 | None:intergenic |
| ACATTAGGCATAGGAGTGTT+CGG | 0.496265 | 8:+34101880 | None:intergenic |
| GAAGTTCTCAAAGTCAAGCC+TGG | 0.500864 | 8:-34099950 | MsG0880043997.01.T01:CDS |
| GAGATGGTCTAGAATCTAGA+TGG | 0.506132 | 8:+34099838 | None:intergenic |
| ACATTCTTCACAGCTATTGT+GGG | 0.507388 | 8:-34100306 | MsG0880043997.01.T01:CDS |
| TGGCAACAAAGCTATTGCTT+GGG | 0.507858 | 8:-34099903 | MsG0880043997.01.T01:CDS |
| CAACGCGACAACGACTTACA+TGG | 0.508156 | 8:-34100062 | MsG0880043997.01.T01:CDS |
| TTTGGGATTCTCATATGGAC+TGG | 0.508757 | 8:-34100532 | MsG0880043997.01.T01:CDS |
| ATCCATTTCGTCTTCAGTTG+AGG | 0.510474 | 8:+34100480 | None:intergenic |
| GACTTACATGGTCCCATTGG+TGG | 0.515092 | 8:-34100050 | MsG0880043997.01.T01:CDS |
| CCACCATGATACAAGAGGTA+TGG | 0.515111 | 8:-34099990 | MsG0880043997.01.T01:CDS |
| GATCCATACCTCTTGTATCA+TGG | 0.527661 | 8:+34099987 | None:intergenic |
| AACGACTTACATGGTCCCAT+TGG | 0.528439 | 8:-34100053 | MsG0880043997.01.T01:CDS |
| TTCCATCAGAGGCCACCAAT+GGG | 0.528807 | 8:+34100038 | None:intergenic |
| GGACTCACTCACAACATCGT+TGG | 0.529301 | 8:+34099877 | None:intergenic |
| GTTCAACCATCAAAATCAAA+GGG | 0.535246 | 8:-34100754 | MsG0880043997.01.T01:CDS |
| GTTCCATCAGAGGCCACCAA+TGG | 0.539101 | 8:+34100037 | None:intergenic |
| TCGTTGTCGCGTTGATCTGG+TGG | 0.539115 | 8:+34100071 | None:intergenic |
| TGTTCAACCATCAAAATCAA+AGG | 0.540437 | 8:-34100755 | MsG0880043997.01.T01:CDS |
| AATCGATATTCGAGTTCGAA+TGG | 0.549093 | 8:+34100405 | None:intergenic |
| CCGTGACCAATATGTGGTGG+AGG | 0.569670 | 8:-34100164 | MsG0880043997.01.T01:CDS |
| AGCAGATCGGAAAGAACATT+AGG | 0.576212 | 8:+34101865 | None:intergenic |
| TCGGAAAGAACATTAGGCAT+AGG | 0.588264 | 8:+34101871 | None:intergenic |
| CCTCCACCACATATTGGTCA+CGG | 0.595305 | 8:+34100164 | None:intergenic |
| GAATCTAGATGGCACAAGGA+TGG | 0.598117 | 8:+34099849 | None:intergenic |
| TTTAGATTTAGTTCCATCAG+AGG | 0.602220 | 8:+34100027 | None:intergenic |
| ACATTCACTAGAATCAATGA+TGG | 0.604068 | 8:-34100248 | MsG0880043997.01.T01:CDS |
| AATATGTGGTGGAGGAAGTG+AGG | 0.611400 | 8:-34100156 | MsG0880043997.01.T01:CDS |
| CTAACCGGGCAGCAGCAGAT+CGG | 0.612726 | 8:+34101852 | None:intergenic |
| TGTGGGAACCCATCAGCTGT+AGG | 0.613913 | 8:-34100289 | MsG0880043997.01.T01:CDS |
| GCTGATATGTGAGTTCCAAA+CGG | 0.616233 | 8:+34100598 | None:intergenic |
| ATTTGCCACCATGATACAAG+AGG | 0.631842 | 8:-34099995 | MsG0880043997.01.T01:CDS |
| GATGGCACAAGGATGGTCAT+CGG | 0.631882 | 8:+34099856 | None:intergenic |
| TGCCAATGAAATGGCAAACG+GGG | 0.634412 | 8:+34099921 | None:intergenic |
| TTGACCTTTAATAGGCACAC+TGG | 0.639214 | 8:+34100864 | None:intergenic |
| AAGCCGTGACCAATATGTGG+TGG | 0.639750 | 8:-34100167 | MsG0880043997.01.T01:CDS |
| TCTAGAATCTAGATGGCACA+AGG | 0.668341 | 8:+34099845 | None:intergenic |
| TCAAAGCCGTGACCAATATG+TGG | 0.671083 | 8:-34100170 | MsG0880043997.01.T01:CDS |
| CCATACCTCTTGTATCATGG+TGG | 0.689437 | 8:+34099990 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATTATATTTACTAAC+CGG | + | Chr8:34100438-34100457 | None:intergenic | 10.0% |
| !! | ACATAATTAAATTATCATTA+CGG | - | Chr8:34100568-34100587 | MsG0880043997.01.T01:CDS | 10.0% |
| !!! | CTTATAGTTTTTTTTTTTAA+CGG | + | Chr8:34100994-34101013 | None:intergenic | 10.0% |
| !! | AATAATTATATTTACTAACC+GGG | + | Chr8:34100437-34100456 | None:intergenic | 15.0% |
| !! | ATAACTGATTGAAATAAATA+TGG | + | Chr8:34100185-34100204 | None:intergenic | 15.0% |
| !! | ATATTTATTTCAATCAGTTA+TGG | - | Chr8:34100184-34100203 | MsG0880043997.01.T01:CDS | 15.0% |
| !! | CATAATTAAATTATCATTAC+GGG | - | Chr8:34100569-34100588 | MsG0880043997.01.T01:CDS | 15.0% |
| !! | TCACTACTAAAAAAATTAAT+CGG | - | Chr8:34100239-34100258 | MsG0880043997.01.T01:CDS | 15.0% |
| !! | TGTGAAATATATAATGAATT+TGG | + | Chr8:34101278-34101297 | None:intergenic | 15.0% |
| !!! | AAAAAAGCAAATCAATTTTT+TGG | - | Chr8:34101554-34101573 | MsG0880043997.01.T01:intron | 15.0% |
| !!! | ATAATATTGGGATTATTTTA+TGG | - | Chr8:34101825-34101844 | MsG0880043997.01.T01:intron | 15.0% |
| !!! | ATTAATTTGAGTTAAACTTA+AGG | - | Chr8:34100894-34100913 | MsG0880043997.01.T01:intron | 15.0% |
| !!! | TTAATTTGAGTTAAACTTAA+GGG | - | Chr8:34100895-34100914 | MsG0880043997.01.T01:intron | 15.0% |
| !! | AAATAGAACAAGAGTTATAT+TGG | - | Chr8:34100855-34100874 | MsG0880043997.01.T01:CDS | 20.0% |
| !! | AATATATATGGCTGTATATA+TGG | - | Chr8:34101152-34101171 | MsG0880043997.01.T01:intron | 20.0% |
| !! | ATAAACCAAACGATAATATT+GGG | - | Chr8:34101813-34101832 | MsG0880043997.01.T01:intron | 20.0% |
| !! | ATATACGATTATCATAAGTT+CGG | - | Chr8:34101350-34101369 | MsG0880043997.01.T01:intron | 20.0% |
| !! | ATGTAAAAATATATGATCAC+AGG | - | Chr8:34100692-34100711 | MsG0880043997.01.T01:CDS | 20.0% |
| !! | TCATAGAATGAATCTAAAAA+AGG | - | Chr8:34102165-34102184 | MsG0880043997.01.T01:intron | 20.0% |
| !! | TTATAACCATTACAACTTAA+TGG | - | Chr8:34100744-34100763 | MsG0880043997.01.T01:CDS | 20.0% |
| !! | TTTATCCAATAAAATAGTTG+TGG | + | Chr8:34100112-34100131 | None:intergenic | 20.0% |
| !!! | CAACTTAATTTTGGTATAAT+TGG | - | Chr8:34100277-34100296 | MsG0880043997.01.T01:CDS | 20.0% |
| !!! | TAATTTGAGTTAAACTTAAG+GGG | - | Chr8:34100896-34100915 | MsG0880043997.01.T01:intron | 20.0% |
| !!! | TTTGGAATTTGAAAACATAT+TGG | + | Chr8:34100661-34100680 | None:intergenic | 20.0% |
| !!! | TTTTACCACAACTATTTTAT+TGG | - | Chr8:34100104-34100123 | MsG0880043997.01.T01:CDS | 20.0% |
| ! | AAGAATATTGGAAATCTGTT+TGG | - | Chr8:34100369-34100388 | MsG0880043997.01.T01:CDS | 25.0% |
| ! | AGAATCCCAAAATTATCATT+TGG | + | Chr8:34101731-34101750 | None:intergenic | 25.0% |
| ! | AGAATGAATCTAAAAAAGGT+TGG | - | Chr8:34102169-34102188 | MsG0880043997.01.T01:intron | 25.0% |
| ! | ATAATCCCAATATTATCGTT+TGG | + | Chr8:34101821-34101840 | None:intergenic | 25.0% |
| ! | CAAATCACATGAAATATTGA+AGG | + | Chr8:34099947-34099966 | None:intergenic | 25.0% |
| ! | CAATCACAGAACAATATATA+TGG | - | Chr8:34101140-34101159 | MsG0880043997.01.T01:intron | 25.0% |
| ! | CTTCAATATTTCATGTGATT+TGG | - | Chr8:34099945-34099964 | MsG0880043997.01.T01:CDS | 25.0% |
| ! | GATAAACCAAACGATAATAT+TGG | - | Chr8:34101812-34101831 | MsG0880043997.01.T01:intron | 25.0% |
| ! | GTTCTATTTGTAGATGTATT+GGG | + | Chr8:34100844-34100863 | None:intergenic | 25.0% |
| ! | TATATTACCCTTCATGAATT+CGG | + | Chr8:34100604-34100623 | None:intergenic | 25.0% |
| ! | TGAGTTCAAATCTGAATAAA+GGG | - | Chr8:34100930-34100949 | MsG0880043997.01.T01:intron | 25.0% |
| ! | TGTTCTATTTGTAGATGTAT+TGG | + | Chr8:34100845-34100864 | None:intergenic | 25.0% |
| ! | TTGAACATCTGAATGTTTAT+GGG | + | Chr8:34101504-34101523 | None:intergenic | 25.0% |
| ! | TTTACATGACTAGATGTATT+TGG | + | Chr8:34100679-34100698 | None:intergenic | 25.0% |
| !! | AATTTGAGTTAAACTTAAGG+GGG | - | Chr8:34100897-34100916 | MsG0880043997.01.T01:intron | 25.0% |
| !! | ATACACACACAACTTAATTT+TGG | - | Chr8:34100268-34100287 | MsG0880043997.01.T01:CDS | 25.0% |
| !! | CCAAACCAAATGATAATTTT+GGG | - | Chr8:34101723-34101742 | MsG0880043997.01.T01:intron | 25.0% |
| !! | GGATTCTATACTTTAGAAAT+AGG | + | Chr8:34100164-34100183 | None:intergenic | 25.0% |
| !! | TGGTTAAAATATTTTTCTGC+TGG | + | Chr8:34101208-34101227 | None:intergenic | 25.0% |
| !!! | AACCTTTTGGAATTAACATA+TGG | - | Chr8:34101618-34101637 | MsG0880043997.01.T01:intron | 25.0% |
| !!! | AATTGATTTGCTTTTTTGAC+CGG | + | Chr8:34101551-34101570 | None:intergenic | 25.0% |
| !!! | AGAAGTTTGACTGATTTTTT+CGG | + | Chr8:34101915-34101934 | None:intergenic | 25.0% |
| !!! | ATAATTTTGGGATTCTCATA+TGG | - | Chr8:34101735-34101754 | MsG0880043997.01.T01:intron | 25.0% |
| !!! | GCAGAAAAATATTTTAACCA+CGG | - | Chr8:34101208-34101227 | MsG0880043997.01.T01:intron | 25.0% |
| !!! | TTTTGGAATTAACATATGGT+GGG | - | Chr8:34101622-34101641 | MsG0880043997.01.T01:intron | 25.0% |
| AAAATCAAAGGGACATTTAC+CGG | - | Chr8:34101529-34101548 | MsG0880043997.01.T01:intron | 30.0% | |
| AAATTATCCCGAATTCATGA+AGG | - | Chr8:34100593-34100612 | MsG0880043997.01.T01:CDS | 30.0% | |
| AACTTCTGTAGCACATAAAT+TGG | - | Chr8:34101928-34101947 | MsG0880043997.01.T01:CDS | 30.0% | |
| AATTATCCCGAATTCATGAA+GGG | - | Chr8:34100594-34100613 | MsG0880043997.01.T01:CDS | 30.0% | |
| ACAACTTAATGGAAATGCTA+GGG | - | Chr8:34100755-34100774 | MsG0880043997.01.T01:CDS | 30.0% | |
| ACATTCACTAGAATCAATGA+TGG | - | Chr8:34102024-34102043 | MsG0880043997.01.T01:intron | 30.0% | |
| AGAACAAGAGTTATATTGGT+GGG | - | Chr8:34100859-34100878 | MsG0880043997.01.T01:CDS | 30.0% | |
| AGAACTTCATAGAGCATATT+AGG | + | Chr8:34102310-34102329 | None:intergenic | 30.0% | |
| ATATTACCCTTCATGAATTC+GGG | + | Chr8:34100603-34100622 | None:intergenic | 30.0% | |
| CACCATATGTTAATTCCAAA+AGG | + | Chr8:34101623-34101642 | None:intergenic | 30.0% | |
| CCCAAAATTATCATTTGGTT+TGG | + | Chr8:34101726-34101745 | None:intergenic | 30.0% | |
| CTAAATCAGGAGAAGAATAT+TGG | - | Chr8:34100357-34100376 | MsG0880043997.01.T01:CDS | 30.0% | |
| CTGAGTTCAAATCTGAATAA+AGG | - | Chr8:34100929-34100948 | MsG0880043997.01.T01:intron | 30.0% | |
| CTTTATTCAGATTTGAACTC+AGG | + | Chr8:34100931-34100950 | None:intergenic | 30.0% | |
| GAAAAACCAAAAATACCGTT+TGG | - | Chr8:34101659-34101678 | MsG0880043997.01.T01:intron | 30.0% | |
| GATTTGGAAAATTTCGTGTT+GGG | - | Chr8:34099961-34099980 | MsG0880043997.01.T01:CDS | 30.0% | |
| GTTCAACCATCAAAATCAAA+GGG | - | Chr8:34101518-34101537 | MsG0880043997.01.T01:intron | 30.0% | |
| GTTGAACATCTGAATGTTTA+TGG | + | Chr8:34101505-34101524 | None:intergenic | 30.0% | |
| TACAACTTAATGGAAATGCT+AGG | - | Chr8:34100754-34100773 | MsG0880043997.01.T01:CDS | 30.0% | |
| TACGGAAGAATCATAAATAC+AGG | + | Chr8:34101311-34101330 | None:intergenic | 30.0% | |
| TAGAACAAGAGTTATATTGG+TGG | - | Chr8:34100858-34100877 | MsG0880043997.01.T01:CDS | 30.0% | |
| TATATTGTTCTGTGATTGTG+TGG | + | Chr8:34101138-34101157 | None:intergenic | 30.0% | |
| TGTTCAACCATCAAAATCAA+AGG | - | Chr8:34101517-34101536 | MsG0880043997.01.T01:intron | 30.0% | |
| TTACTAGTAACCAACACATA+CGG | + | Chr8:34101329-34101348 | None:intergenic | 30.0% | |
| ! | ATGAATTTGGTTCGTCATTA+CGG | + | Chr8:34101265-34101284 | None:intergenic | 30.0% |
| ! | ATTTTGCAGTTGACTATAGT+GGG | - | Chr8:34100323-34100342 | MsG0880043997.01.T01:CDS | 30.0% |
| ! | CATAAGTTCGGAATTTTGTT+TGG | - | Chr8:34101362-34101381 | MsG0880043997.01.T01:intron | 30.0% |
| ! | GCATTTCCATTAAGTTGTAA+TGG | + | Chr8:34100753-34100772 | None:intergenic | 30.0% |
| ! | GCCAAACCAAATGATAATTT+TGG | - | Chr8:34101722-34101741 | MsG0880043997.01.T01:intron | 30.0% |
| ! | TATTTTGCAGTTGACTATAG+TGG | - | Chr8:34100322-34100341 | MsG0880043997.01.T01:CDS | 30.0% |
| ! | TGATTTGGAAAATTTCGTGT+TGG | - | Chr8:34099960-34099979 | MsG0880043997.01.T01:CDS | 30.0% |
| ! | TTTAGATTTAGTTCCATCAG+AGG | + | Chr8:34102248-34102267 | None:intergenic | 30.0% |
| !! | AAATGTCCCTTTGATTTTGA+TGG | + | Chr8:34101527-34101546 | None:intergenic | 30.0% |
| !! | ATTCTTTCCAAGCTTTGAAA+TGG | + | Chr8:34102056-34102075 | None:intergenic | 30.0% |
| !! | ATTGGGATTATTTTATGGAC+TGG | - | Chr8:34101830-34101849 | MsG0880043997.01.T01:intron | 30.0% |
| !!! | AATTTTTTGGAACTCGCAAA+TGG | - | Chr8:34101567-34101586 | MsG0880043997.01.T01:intron | 30.0% |
| !!! | CTTTTGGAATTAACATATGG+TGG | - | Chr8:34101621-34101640 | MsG0880043997.01.T01:intron | 30.0% |
| !!! | GGAATTTTGTTTGGTTTTGA+TGG | - | Chr8:34101371-34101390 | MsG0880043997.01.T01:intron | 30.0% |
| ACATTCTTCACAGCTATTGT+GGG | - | Chr8:34101966-34101985 | MsG0880043997.01.T01:intron | 35.0% | |
| GTTAAACTTAAGGGGGTAAT+AGG | - | Chr8:34100904-34100923 | MsG0880043997.01.T01:intron | 35.0% | |
| TATGATTCTTCCGTATGTGT+TGG | - | Chr8:34101316-34101335 | MsG0880043997.01.T01:intron | 35.0% | |
| TCATAAATACAGGCACATGT+AGG | + | Chr8:34101301-34101320 | None:intergenic | 35.0% | |
| TGATATTACTTGCAGCGTTA+AGG | - | Chr8:34099987-34100006 | MsG0880043997.01.T01:CDS | 35.0% | |
| TTCTCGTCTTGACCTTTAAT+AGG | + | Chr8:34101419-34101438 | None:intergenic | 35.0% | |
| ! | AATCGATATTCGAGTTCGAA+TGG | + | Chr8:34101870-34101889 | None:intergenic | 35.0% |
| ! | TGAGTTCCAAACGGTATTTT+TGG | + | Chr8:34101668-34101687 | None:intergenic | 35.0% |
| ! | TTTTGCAGTTGACTATAGTG+GGG | - | Chr8:34100324-34100343 | MsG0880043997.01.T01:CDS | 35.0% |
| !! | AAGAGTTATATTGGTGGGTT+GGG | - | Chr8:34100864-34100883 | MsG0880043997.01.T01:CDS | 35.0% |
| !! | ATGTATTGGGTTTTGTCTGT+TGG | + | Chr8:34100831-34100850 | None:intergenic | 35.0% |
| !! | GATTTTGCCATTTCAAAGCT+TGG | - | Chr8:34102046-34102065 | MsG0880043997.01.T01:intron | 35.0% |
| !! | TAGCTTTGTTGCCAATGAAA+TGG | + | Chr8:34102363-34102382 | None:intergenic | 35.0% |
| !!! | TCATTTTTTTGCCAGGATAG+AGG | + | Chr8:34101472-34101491 | None:intergenic | 35.0% |
| AGCAGATCGGAAAGAACATT+AGG | + | Chr8:34100410-34100429 | None:intergenic | 40.0% | |
| ATCCATTTCGTCTTCAGTTG+AGG | + | Chr8:34101795-34101814 | None:intergenic | 40.0% | |
| ATTTGCCACCATGATACAAG+AGG | - | Chr8:34102277-34102296 | MsG0880043997.01.T01:intron | 40.0% | |
| CAAACCAACCGAAGAAGAAA+TGG | - | Chr8:34101700-34101719 | MsG0880043997.01.T01:intron | 40.0% | |
| CACATTCTTCACAGCTATTG+TGG | - | Chr8:34101965-34101984 | MsG0880043997.01.T01:intron | 40.0% | |
| CCTGGCAAAAAAATGAGCTT+AGG | - | Chr8:34101476-34101495 | MsG0880043997.01.T01:intron | 40.0% | |
| CTCTCTAGCACATGAGTATT+TGG | + | Chr8:34100795-34100814 | None:intergenic | 40.0% | |
| GATCCATACCTCTTGTATCA+TGG | + | Chr8:34102288-34102307 | None:intergenic | 40.0% | |
| GCTGATATGTGAGTTCCAAA+CGG | + | Chr8:34101677-34101696 | None:intergenic | 40.0% | |
| GGGATCAATGGATCTAAATC+AGG | - | Chr8:34100344-34100363 | MsG0880043997.01.T01:CDS | 40.0% | |
| GTTATGTTACAAGATTGCCG+TGG | + | Chr8:34101228-34101247 | None:intergenic | 40.0% | |
| GTTGCCAATGAAATGGCAAA+CGG | + | Chr8:34102356-34102375 | None:intergenic | 40.0% | |
| TACCTCAACTGAAGACGAAA+TGG | - | Chr8:34101790-34101809 | MsG0880043997.01.T01:intron | 40.0% | |
| TCGGAAAGAACATTAGGCAT+AGG | + | Chr8:34100404-34100423 | None:intergenic | 40.0% | |
| TGGCAACAAAGCTATTGCTT+GGG | - | Chr8:34102369-34102388 | MsG0880043997.01.T01:intron | 40.0% | |
| TTGACCTTTAATAGGCACAC+TGG | + | Chr8:34101411-34101430 | None:intergenic | 40.0% | |
| TTGCCAATGAAATGGCAAAC+GGG | + | Chr8:34102355-34102374 | None:intergenic | 40.0% | |
| TTGGCAACAAAGCTATTGCT+TGG | - | Chr8:34102368-34102387 | MsG0880043997.01.T01:intron | 40.0% | |
| ! | CAAGAGTTATATTGGTGGGT+TGG | - | Chr8:34100863-34100882 | MsG0880043997.01.T01:CDS | 40.0% |
| ! | GCAAAAGCAAGTCAACCTTT+TGG | - | Chr8:34101605-34101624 | MsG0880043997.01.T01:intron | 40.0% |
| ! | TGGTTTGGCCATTTCTTCTT+CGG | + | Chr8:34101711-34101730 | None:intergenic | 40.0% |
| ! | TTGACTATAGTGGGGATCAA+TGG | - | Chr8:34100332-34100351 | MsG0880043997.01.T01:CDS | 40.0% |
| ! | TTTGGGATTCTCATATGGAC+TGG | - | Chr8:34101740-34101759 | MsG0880043997.01.T01:intron | 40.0% |
| !! | ACATTAGGCATAGGAGTGTT+CGG | + | Chr8:34100395-34100414 | None:intergenic | 40.0% |
| !! | TGGTTAGAAAGAGTGTTGCA+AGG | - | Chr8:34100204-34100223 | MsG0880043997.01.T01:CDS | 40.0% |
| !!! | CCTAAGCTCATTTTTTTGCC+AGG | + | Chr8:34101479-34101498 | None:intergenic | 40.0% |
| AACGACTTACATGGTCCCAT+TGG | - | Chr8:34102219-34102238 | MsG0880043997.01.T01:intron | 45.0% | |
| CCACCATGATACAAGAGGTA+TGG | - | Chr8:34102282-34102301 | MsG0880043997.01.T01:intron | 45.0% | |
| CCATACCTCTTGTATCATGG+TGG | + | Chr8:34102285-34102304 | None:intergenic | 45.0% | |
| GAAGTTCTCAAAGTCAAGCC+TGG | - | Chr8:34102322-34102341 | MsG0880043997.01.T01:intron | 45.0% | |
| GACTCACTCACAACATCGTT+GGG | + | Chr8:34102397-34102416 | None:intergenic | 45.0% | |
| GATCTGTTTCCTTTGCTAGC+AGG | + | Chr8:34101097-34101116 | None:intergenic | 45.0% | |
| GGAACCAGTGTGCCTATTAA+AGG | - | Chr8:34101404-34101423 | MsG0880043997.01.T01:intron | 45.0% | |
| GTCAAGACGAGAAGCAATAC+TGG | - | Chr8:34101426-34101445 | MsG0880043997.01.T01:intron | 45.0% | |
| GTGGAGGAAGTGAGGAAAAT+AGG | - | Chr8:34102124-34102143 | MsG0880043997.01.T01:intron | 45.0% | |
| TCAAAGCCGTGACCAATATG+TGG | - | Chr8:34102102-34102121 | MsG0880043997.01.T01:intron | 45.0% | |
| TCACTTCCTCCACCACATAT+TGG | + | Chr8:34102117-34102136 | None:intergenic | 45.0% | |
| TCACTTCTCCTACAGCTGAT+GGG | + | Chr8:34101994-34102013 | None:intergenic | 45.0% | |
| TGATCACAACCTGCTAGCAA+AGG | - | Chr8:34101085-34101104 | MsG0880043997.01.T01:intron | 45.0% | |
| TGCCAATGAAATGGCAAACG+GGG | + | Chr8:34102354-34102373 | None:intergenic | 45.0% | |
| TGCTAGCAGGTTGTGATCAA+GGG | + | Chr8:34101084-34101103 | None:intergenic | 45.0% | |
| TTCACTTCTCCTACAGCTGA+TGG | + | Chr8:34101995-34102014 | None:intergenic | 45.0% | |
| TTCGAACATGACCTCTATCC+TGG | - | Chr8:34101458-34101477 | MsG0880043997.01.T01:intron | 45.0% | |
| TTGCTAGCAGGTTGTGATCA+AGG | + | Chr8:34101085-34101104 | None:intergenic | 45.0% | |
| TTGGCCATTTCTTCTTCGGT+TGG | + | Chr8:34101707-34101726 | None:intergenic | 45.0% | |
| ! | AATATGTGGTGGAGGAAGTG+AGG | - | Chr8:34102116-34102135 | MsG0880043997.01.T01:intron | 45.0% |
| AAGCCGTGACCAATATGTGG+TGG | - | Chr8:34102105-34102124 | MsG0880043997.01.T01:intron | 50.0% | |
| CAACGCGACAACGACTTACA+TGG | - | Chr8:34102210-34102229 | MsG0880043997.01.T01:intron | 50.0% | |
| CCTCCACCACATATTGGTCA+CGG | + | Chr8:34102111-34102130 | None:intergenic | 50.0% | |
| CTTGCAGCGTTAAGGAACTG+AGG | - | Chr8:34099995-34100014 | MsG0880043997.01.T01:CDS | 50.0% | |
| GACTTACATGGTCCCATTGG+TGG | - | Chr8:34102222-34102241 | MsG0880043997.01.T01:intron | 50.0% | |
| GATCAAGGGTCTGTACCTGT+AGG | + | Chr8:34101070-34101089 | None:intergenic | 50.0% | |
| GATGGCACAAGGATGGTCAT+CGG | + | Chr8:34102419-34102438 | None:intergenic | 50.0% | |
| GGACTCACTCACAACATCGT+TGG | + | Chr8:34102398-34102417 | None:intergenic | 50.0% | |
| TTCCATCAGAGGCCACCAAT+GGG | + | Chr8:34102237-34102256 | None:intergenic | 50.0% | |
| ! | AAGTCGTTGTCGCGTTGATC+TGG | + | Chr8:34102207-34102226 | None:intergenic | 50.0% |
| ! | GTCCCCGTTTGCCATTTCAT+TGG | - | Chr8:34102349-34102368 | MsG0880043997.01.T01:intron | 50.0% |
| !!! | GGTTTTGATGGTGCAGAGAG+CGG | - | Chr8:34101383-34101402 | MsG0880043997.01.T01:intron | 50.0% |
| CATCCTGCTACACAGCCTAC+AGG | - | Chr8:34101052-34101071 | MsG0880043997.01.T01:intron | 55.0% | |
| CCGTGACCAATATGTGGTGG+AGG | - | Chr8:34102108-34102127 | MsG0880043997.01.T01:intron | 55.0% | |
| GTACCTGTAGGCTGTGTAGC+AGG | + | Chr8:34101058-34101077 | None:intergenic | 55.0% | |
| GTTCCATCAGAGGCCACCAA+TGG | + | Chr8:34102238-34102257 | None:intergenic | 55.0% | |
| TGTGGGAACCCATCAGCTGT+AGG | - | Chr8:34101983-34102002 | MsG0880043997.01.T01:intron | 55.0% | |
| ! | TCGTTGTCGCGTTGATCTGG+TGG | + | Chr8:34102204-34102223 | None:intergenic | 55.0% |
| CTAACCGGGCAGCAGCAGAT+CGG | + | Chr8:34100423-34100442 | None:intergenic | 60.0% | |
| CTTTCCGATCTGCTGCTGCC+CGG | - | Chr8:34100416-34100435 | MsG0880043997.01.T01:CDS | 60.0% | |
| TGGCAAACGGGGACAGTTCC+AGG | + | Chr8:34102343-34102362 | None:intergenic | 60.0% | |
| ! | GTCCCATTGGTGGCCTCTGA+TGG | - | Chr8:34102232-34102251 | MsG0880043997.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 34099853 | 34102441 | 34099853 | ID=MsG0880043997.01;Name=MsG0880043997.01 |
| Chr8 | mRNA | 34099853 | 34102441 | 34099853 | ID=MsG0880043997.01.T01;Parent=MsG0880043997.01;Name=MsG0880043997.01.T01;_AED=0.39;_eAED=0.39;_QI=0|0|0|1|0.5|0.66|3|0|395 |
| Chr8 | exon | 34102403 | 34102441 | 34102403 | ID=MsG0880043997.01.T01:exon:10354;Parent=MsG0880043997.01.T01 |
| Chr8 | exon | 34101857 | 34101962 | 34101857 | ID=MsG0880043997.01.T01:exon:10353;Parent=MsG0880043997.01.T01 |
| Chr8 | exon | 34099853 | 34100895 | 34099853 | ID=MsG0880043997.01.T01:exon:10352;Parent=MsG0880043997.01.T01 |
| Chr8 | CDS | 34102403 | 34102441 | 34102403 | ID=MsG0880043997.01.T01:cds;Parent=MsG0880043997.01.T01 |
| Chr8 | CDS | 34101857 | 34101962 | 34101857 | ID=MsG0880043997.01.T01:cds;Parent=MsG0880043997.01.T01 |
| Chr8 | CDS | 34099853 | 34100895 | 34099853 | ID=MsG0880043997.01.T01:cds;Parent=MsG0880043997.01.T01 |
| Gene Sequence |
| Protein sequence |
