Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0023440 | Msa0055100 | 0.800018 | 1.754302e-48 | -8.615850e-47 |
| Msa0023440 | Msa0101180 | 0.806326 | 8.686466e-50 | -8.615850e-47 |
| Msa0023440 | Msa0154920 | 0.801721 | 7.877175e-49 | -8.615850e-47 |
| Msa0023440 | Msa0188890 | 0.804622 | 1.977767e-49 | -8.615850e-47 |
| Msa0023440 | Msa0207350 | 0.805754 | 1.145908e-49 | -8.615850e-47 |
| Msa0023440 | Msa0231380 | 0.801892 | 7.264471e-49 | -8.615850e-47 |
| Msa0023440 | Msa0254940 | 0.815968 | 7.043088e-52 | -8.615850e-47 |
| Msa0023440 | Msa0270660 | 0.800880 | 1.171120e-48 | -8.615850e-47 |
| Msa0023440 | Msa0343850 | 0.801012 | 1.100757e-48 | -8.615850e-47 |
| Msa0023440 | Msa0358400 | 0.802512 | 5.416210e-49 | -8.615850e-47 |
| Msa0023440 | Msa0413410 | 0.802624 | 5.135965e-49 | -8.615850e-47 |
| Msa0023440 | Msa0452710 | 0.809180 | 2.149607e-50 | -8.615850e-47 |
| Msa0023440 | Msa0453690 | 0.823927 | 1.064299e-53 | -8.615850e-47 |
| Msa0023440 | Msa0468250 | 0.805163 | 1.524031e-49 | -8.615850e-47 |
| Msa0023440 | Msa0477310 | 0.830829 | 2.355397e-55 | -8.615850e-47 |
| Msa0023440 | Msa0517090 | 0.803394 | 3.559913e-49 | -8.615850e-47 |
| Msa0023440 | Msa0614510 | 0.814695 | 1.351618e-51 | -8.615850e-47 |
| Msa0023440 | Msa0625790 | 0.800672 | 1.291268e-48 | -8.615850e-47 |
| Msa0023440 | Msa0640500 | 0.800486 | 1.409337e-48 | -8.615850e-47 |
| Msa0023440 | Msa0743530 | 0.800803 | 1.214194e-48 | -8.615850e-47 |
| Msa0023440 | Msa0757800 | 0.814479 | 1.508422e-51 | -8.615850e-47 |
| Msa0023440 | Msa0767100 | 0.807395 | 5.162682e-50 | -8.615850e-47 |
| Msa0023440 | Msa0784380 | 0.800460 | 1.426413e-48 | -8.615850e-47 |
| Msa0023440 | Msa0868440 | 0.816064 | 6.704631e-52 | -8.615850e-47 |
| Msa0023440 | Msa0890300 | 0.801514 | 8.688061e-49 | -8.615850e-47 |
| Msa0023440 | Msa0898760 | 0.807605 | 4.657696e-50 | -8.615850e-47 |
| Msa0023440 | Msa0928120 | 0.819192 | 1.321132e-52 | -8.615850e-47 |
| Msa0023440 | Msa1011510 | 0.823769 | 1.158910e-53 | -8.615850e-47 |
| Msa0023440 | Msa1033970 | 0.803197 | 3.909801e-49 | -8.615850e-47 |
| Msa0023440 | Msa1042660 | 0.801430 | 9.036973e-49 | -8.615850e-47 |
| Msa0023440 | Msa1142670 | 0.802565 | 5.282824e-49 | -8.615850e-47 |
| Msa0023440 | Msa1164590 | 0.802958 | 4.381881e-49 | -8.615850e-47 |
| Msa0023440 | Msa1323690 | 0.806586 | 7.653507e-50 | -8.615850e-47 |
| Msa0023440 | Msa1461490 | 0.801939 | 7.105233e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0023440 | MtrunA17_Chr1g0176681 | 95.597 | 318 | 14 | 0 | 1 | 318 | 1 | 318 | 0.0 | 626 |
| Msa0023440 | MtrunA17_Chr4g0039211 | 93.082 | 318 | 22 | 0 | 1 | 318 | 1 | 318 | 0.0 | 604 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0023440 | AT3G13410.1 | 50.943 | 318 | 144 | 7 | 5 | 318 | 11 | 320 | 5.34e-103 | 305 |
| Msa0023440 | AT1G55546.1 | 58.696 | 92 | 35 | 2 | 22 | 113 | 41 | 129 | 5.38e-26 | 100 |
Find 95 sgRNAs with CRISPR-Local
Find 575 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGAAGACTCATTGGTTTC+AGG | 0.174899 | 1_1:+44680566 | Msa0023440:CDS |
| GCCATTTCGCCTTCAAATTA+AGG | 0.184613 | 1_1:-44683540 | None:intergenic |
| TGGGTTGTCTCTTCTCTTCA+TGG | 0.227262 | 1_1:+44683511 | Msa0023440:three_prime_UTR |
| TTTCCTTGGATCTTGCTCTA+TGG | 0.240071 | 1_1:+44680634 | Msa0023440:CDS |
| CAATCCAGTATCCTTCTTAT+AGG | 0.262025 | 1_1:+44681074 | Msa0023440:CDS |
| CCAGCTTAAATCATCACTTT+TGG | 0.275529 | 1_1:+44681171 | Msa0023440:CDS |
| TGTCTGAACCCTATTCATTA+AGG | 0.284744 | 1_1:+44683454 | Msa0023440:three_prime_UTR |
| ATATTAATTGCAATTCTTTA+CGG | 0.293207 | 1_1:+44683239 | Msa0023440:three_prime_UTR |
| TTCCTTCCTCTTGGTCAAAT+AGG | 0.304215 | 1_1:-44680801 | None:intergenic |
| TACTGTTAGTTTCTTTCTGC+TGG | 0.311628 | 1_1:+44683485 | Msa0023440:three_prime_UTR |
| GTGCAAAGGGAAGAAATTTC+AGG | 0.328710 | 1_1:+44680111 | Msa0023440:intron |
| GTGGCGCCTCAAATCTTGTT+GGG | 0.331602 | 1_1:-44683143 | None:intergenic |
| GAAGGACTCCGTTAATTATC+AGG | 0.337638 | 1_1:+44679822 | Msa0023440:CDS |
| ATCAGCACTGTAGAGGAATC+TGG | 0.337798 | 1_1:+44681010 | Msa0023440:CDS |
| ACAGACTTTGCTAGGTCTTT+CGG | 0.342039 | 1_1:-44679853 | None:intergenic |
| GTTAAAGATAGTATCTGTTC+TGG | 0.342539 | 1_1:+44683184 | Msa0023440:three_prime_UTR |
| TTCCTTGGATCTTGCTCTAT+GGG | 0.350474 | 1_1:+44680635 | Msa0023440:CDS |
| ATATCCAATCCTTAATGAAT+AGG | 0.356893 | 1_1:-44683463 | None:intergenic |
| TGTGGAGATGATTTAGGAAT+TGG | 0.359594 | 1_1:+44680602 | Msa0023440:CDS |
| CCCTTAATTTGAAGGCGAAA+TGG | 0.373547 | 1_1:+44683539 | Msa0023440:three_prime_UTR |
| CCACTGTTCCCGCATTCCTT+TGG | 0.373851 | 1_1:+44678769 | Msa0023440:CDS |
| GTGGCTCTCTTCCTTCCTCT+TGG | 0.374455 | 1_1:-44680810 | None:intergenic |
| CCATTTCGCCTTCAAATTAA+GGG | 0.375903 | 1_1:-44683539 | None:intergenic |
| CCACAAAGGGAAAACAGATT+TGG | 0.378624 | 1_1:+44680829 | Msa0023440:CDS |
| GATCTGGCACTTCTATTTGT+TGG | 0.383798 | 1_1:+44680142 | Msa0023440:CDS |
| AATCCAGTATCCTTCTTATA+GGG | 0.385077 | 1_1:+44681075 | Msa0023440:CDS |
| GAAGCCTGTGGAGATGATTT+AGG | 0.390687 | 1_1:+44680596 | Msa0023440:CDS |
| TTTCTAGCAGAAAGTACAAC+AGG | 0.392572 | 1_1:+44681109 | Msa0023440:CDS |
| GATCCCTATAAGAAGGATAC+TGG | 0.395705 | 1_1:-44681078 | None:intergenic |
| TGTGGCGCCTCAAATCTTGT+TGG | 0.398283 | 1_1:-44683144 | None:intergenic |
| TGTGAACTTGGAAGACTCAT+TGG | 0.398899 | 1_1:+44680559 | Msa0023440:CDS |
| TCCATCACAAGCTGTAGAAT+TGG | 0.403651 | 1_1:-44681143 | None:intergenic |
| ATTGGCAACGTTGCTTTCCT+TGG | 0.404386 | 1_1:+44680620 | Msa0023440:CDS |
| TATCCAATCCTTAATGAATA+GGG | 0.408665 | 1_1:-44683462 | None:intergenic |
| TGGCTTCACCCTTAATTTGA+AGG | 0.409464 | 1_1:+44683531 | Msa0023440:three_prime_UTR |
| GATAGTATCTGTTCTGGTGC+TGG | 0.415497 | 1_1:+44683190 | Msa0023440:three_prime_UTR |
| TCCTCTGATGCTGAAACATA+TGG | 0.415932 | 1_1:-44680536 | None:intergenic |
| AATCTGTTTGATTAGATTTG+TGG | 0.432519 | 1_1:+44674965 | None:intergenic |
| TAGTTTCTTTCTGCTGGCTG+TGG | 0.440663 | 1_1:+44683491 | Msa0023440:three_prime_UTR |
| CAGATACTATCTTTAACAAA+TGG | 0.449419 | 1_1:-44683178 | None:intergenic |
| AGCATCAGAGGATGTGAACT+TGG | 0.456717 | 1_1:+44680547 | Msa0023440:CDS |
| AGAAATGACCTGATAATTAA+CGG | 0.469102 | 1_1:-44679830 | None:intergenic |
| CAGATAAAACAGACTTTGCT+AGG | 0.471417 | 1_1:-44679861 | None:intergenic |
| GAACCCTATTCATTAAGGAT+TGG | 0.480805 | 1_1:+44683459 | Msa0023440:three_prime_UTR |
| AGTTTCTTTCTGCTGGCTGT+GGG | 0.481436 | 1_1:+44683492 | Msa0023440:three_prime_UTR |
| CTGGCACTTCTATTTGTTGG+TGG | 0.482408 | 1_1:+44680145 | Msa0023440:CDS |
| ATCGGGCCTTTGCTGTATGA+TGG | 0.483662 | 1_1:+44683110 | Msa0023440:CDS |
| GATCTCAGACAATGGATTGA+AGG | 0.492742 | 1_1:+44679804 | Msa0023440:CDS |
| TCAGCACTGTAGAGGAATCT+GGG | 0.496576 | 1_1:+44681011 | Msa0023440:CDS |
| TGACACCCCAACAAGATTTG+AGG | 0.505755 | 1_1:+44683137 | Msa0023440:CDS |
| ATTTCAGGATCCTCTCGATC+TGG | 0.506004 | 1_1:+44680126 | Msa0023440:CDS |
| ATAGTATCTGTTCTGGTGCT+GGG | 0.510684 | 1_1:+44683191 | Msa0023440:three_prime_UTR |
| GCAGAAAGTACAACAGGGAA+TGG | 0.512267 | 1_1:+44681115 | Msa0023440:CDS |
| AATTGCAAAGACTACTCCAT+TGG | 0.522813 | 1_1:-44678742 | None:intergenic |
| GGAAGGAAGAGAGCCACAAA+GGG | 0.523325 | 1_1:+44680816 | Msa0023440:CDS |
| GGATCTTGCTCTATGGGCAC+TGG | 0.526165 | 1_1:+44680641 | Msa0023440:CDS |
| TCCATATGTTTCAGCATCAG+AGG | 0.529796 | 1_1:+44680535 | Msa0023440:CDS |
| ATTGCAAAGACTACTCCATT+GGG | 0.529893 | 1_1:-44678741 | None:intergenic |
| CTTTGCAGATCCCTATAAGA+AGG | 0.530818 | 1_1:-44681085 | None:intergenic |
| TGTCAGATCCAACACTTCCA+TGG | 0.535398 | 1_1:+44680508 | Msa0023440:CDS |
| ACTTCTATTTGTTGGTGGAG+AGG | 0.537885 | 1_1:+44680150 | Msa0023440:CDS |
| TCGGGCCTTTGCTGTATGAT+GGG | 0.544701 | 1_1:+44683111 | Msa0023440:CDS |
| CTTTGCAGGATCTCAGACAA+TGG | 0.545420 | 1_1:+44679796 | Msa0023440:intron |
| AGGAAGGAAGAGAGCCACAA+AGG | 0.547575 | 1_1:+44680815 | Msa0023440:CDS |
| TGAGATGACCAAAGGAATGC+GGG | 0.554399 | 1_1:-44678777 | None:intergenic |
| CCAAAAGTGATGATTTAAGC+TGG | 0.555189 | 1_1:-44681171 | None:intergenic |
| TGGAAATGCCATGGAAGTGT+TGG | 0.562231 | 1_1:-44680516 | None:intergenic |
| ACCAATTCTACAGCTTGTGA+TGG | 0.566623 | 1_1:+44681142 | Msa0023440:CDS |
| AATTCCTAAATCATCTCCAC+AGG | 0.570593 | 1_1:-44680600 | None:intergenic |
| CCAAAGGAATGCGGGAACAG+TGG | 0.580702 | 1_1:-44678769 | None:intergenic |
| TCAGGATTTGCTGAAGCCTG+TGG | 0.581197 | 1_1:+44680584 | Msa0023440:CDS |
| GATTTGGTTGTGTTCTGCAA+TGG | 0.583901 | 1_1:+44680845 | Msa0023440:CDS |
| TGGCGCCTCAAATCTTGTTG+GGG | 0.585241 | 1_1:-44683142 | None:intergenic |
| AGGAATGCGGGAACAGTGGA+GGG | 0.590173 | 1_1:-44678765 | None:intergenic |
| CTTCTTATAGGGATCTGCAA+AGG | 0.590622 | 1_1:+44681086 | Msa0023440:CDS |
| AAAAGTAAAACATCTATCGT+AGG | 0.594345 | 1_1:+44683348 | Msa0023440:three_prime_UTR |
| CAAATGGATCATCACTCTTG+TGG | 0.596002 | 1_1:-44683162 | None:intergenic |
| TTAATTGCAATTCTTTACGG+AGG | 0.596687 | 1_1:+44683242 | Msa0023440:three_prime_UTR |
| TACAGGCCTATTTGACCAAG+AGG | 0.600593 | 1_1:+44680795 | Msa0023440:intron |
| GGCCTATTTGACCAAGAGGA+AGG | 0.601192 | 1_1:+44680799 | Msa0023440:intron |
| AAGGAATGCGGGAACAGTGG+AGG | 0.601514 | 1_1:-44678766 | None:intergenic |
| AGTAATGGCATCATCATCGT+TGG | 0.602554 | 1_1:-44678690 | None:intergenic |
| GCAACAATGAAAGCAAGTAA+TGG | 0.605206 | 1_1:-44678705 | None:intergenic |
| AGCTCTTTCAGACTTGCTCA+AGG | 0.607208 | 1_1:+44680360 | Msa0023440:CDS |
| TGAGCTTATCAGCACTGTAG+AGG | 0.612011 | 1_1:+44681003 | Msa0023440:CDS |
| ATGAGATGACCAAAGGAATG+CGG | 0.613640 | 1_1:-44678778 | None:intergenic |
| AATAGAAGTGCCAGATCGAG+AGG | 0.625453 | 1_1:-44680136 | None:intergenic |
| GTTGACAGAACACAATCTGA+AGG | 0.628507 | 1_1:+44680887 | Msa0023440:CDS |
| TGCCCATAGAGCAAGATCCA+AGG | 0.630609 | 1_1:-44680637 | None:intergenic |
| GGTTATAATGAGATGACCAA+AGG | 0.637713 | 1_1:-44678785 | None:intergenic |
| CAATTCCCATCATACAGCAA+AGG | 0.645532 | 1_1:-44683116 | None:intergenic |
| TTTATGTATCAGATATCTCG+AGG | 0.646281 | 1_1:+44681050 | Msa0023440:CDS |
| CAGCACTGTAGAGGAATCTG+GGG | 0.657625 | 1_1:+44681012 | Msa0023440:CDS |
| TGAAACATATGGAAATGCCA+TGG | 0.679330 | 1_1:-44680525 | None:intergenic |
| TTCTAGCAGAAAGTACAACA+GGG | 0.701869 | 1_1:+44681110 | Msa0023440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATTTTATTTTTTTTA+GGG | - | chr1_1:44678388-44678407 | None:intergenic | 0.0% |
| !!! | ATTATTATTTTATTTTTTTT+AGG | - | chr1_1:44678389-44678408 | None:intergenic | 0.0% |
| !! | AAATATTATATTATTAATTA+AGG | + | chr1_1:44682081-44682100 | Msa0023440:intron | 0.0% |
| !!! | TCTATAATGTTTTTATAAAT+TGG | + | chr1_1:44675236-44675255 | Msa0023440:intron | 10.0% |
| !! | ATAAAAGTAAAATAAAAAGA+TGG | + | chr1_1:44675357-44675376 | Msa0023440:intron | 10.0% |
| !!! | TAAAAAAGAAAATACATTTT+CGG | - | chr1_1:44675545-44675564 | None:intergenic | 10.0% |
| !!! | AGTTTTATTTGAATTAATTA+GGG | - | chr1_1:44675645-44675664 | None:intergenic | 10.0% |
| !!! | AAGTTTTATTTGAATTAATT+AGG | - | chr1_1:44675646-44675665 | None:intergenic | 10.0% |
| !!! | AGTATTAATATTTATTTTTG+CGG | - | chr1_1:44676743-44676762 | None:intergenic | 10.0% |
| !! | AATAATATAGATTAAATTAG+TGG | - | chr1_1:44676835-44676854 | None:intergenic | 10.0% |
| !!! | AAAAAATATATTTTGCATTT+TGG | + | chr1_1:44677005-44677024 | Msa0023440:intron | 10.0% |
| !!! | AAAGTAATTATTTTTATTAG+AGG | + | chr1_1:44678011-44678030 | Msa0023440:intron | 10.0% |
| !!! | AAGTAATTATTTTTATTAGA+GGG | + | chr1_1:44678012-44678031 | Msa0023440:intron | 10.0% |
| !! | TAAAACATAAAACTAATTTA+TGG | - | chr1_1:44678207-44678226 | None:intergenic | 10.0% |
| !!! | ATAAATTAGTTTTATGTTTT+AGG | + | chr1_1:44678206-44678225 | Msa0023440:intron | 10.0% |
| !!! | TTTTATTTTAAAGAGTTTAA+TGG | - | chr1_1:44678346-44678365 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTTTTTTTGTAG+GGG | - | chr1_1:44678427-44678446 | None:intergenic | 10.0% |
| !! | TGAACATTTATTATAAATAA+AGG | + | chr1_1:44681651-44681670 | Msa0023440:intron | 10.0% |
| !! | GAACATTTATTATAAATAAA+GGG | + | chr1_1:44681652-44681671 | Msa0023440:intron | 10.0% |
| !!! | TTTGTTAATAATTTTGATAT+CGG | + | chr1_1:44683092-44683111 | Msa0023440:CDS | 10.0% |
| !!! | TAAAATAAAAAGATGGTTTT+AGG | + | chr1_1:44675364-44675383 | Msa0023440:intron | 15.0% |
| !!! | AAAATAAAAAGATGGTTTTA+GGG | + | chr1_1:44675365-44675384 | Msa0023440:intron | 15.0% |
| !! | CCTATGTATTTATTTAAATT+AGG | - | chr1_1:44675682-44675701 | None:intergenic | 15.0% |
| !! | CCTAATTTAAATAAATACAT+AGG | + | chr1_1:44675679-44675698 | Msa0023440:intron | 15.0% |
| !! | ATATTAATATTACACAAACA+TGG | - | chr1_1:44676947-44676966 | None:intergenic | 15.0% |
| !!! | TATTAGTTTAATTACAGTTT+TGG | + | chr1_1:44677595-44677614 | Msa0023440:intron | 15.0% |
| !!! | TTTTTGATAAAATATGATGA+TGG | + | chr1_1:44678241-44678260 | Msa0023440:intron | 15.0% |
| !! | AATGAAATTTCATTTGAAAA+AGG | + | chr1_1:44679131-44679150 | Msa0023440:intron | 15.0% |
| !! | ATAAGAAGAAAATATAAACA+GGG | + | chr1_1:44679532-44679551 | Msa0023440:intron | 15.0% |
| !!! | TCCTTTTTCAATTTTTTATT+TGG | + | chr1_1:44680085-44680104 | Msa0023440:intron | 15.0% |
| !! | TCCAAATAAAAAATTGAAAA+AGG | - | chr1_1:44680089-44680108 | None:intergenic | 15.0% |
| !!! | ATTATGTTTTATTCATAAGA+AGG | - | chr1_1:44681318-44681337 | None:intergenic | 15.0% |
| !! | TTATAAAAAACATTAGAAAG+AGG | + | chr1_1:44682527-44682546 | Msa0023440:intron | 15.0% |
| !! | ACTAAAAATAATACAGAAAT+AGG | + | chr1_1:44682581-44682600 | Msa0023440:intron | 15.0% |
| !! | CTAAAAATAATACAGAAATA+GGG | + | chr1_1:44682582-44682601 | Msa0023440:intron | 15.0% |
| !!! | AAAAGATGATTATTTTTCAT+TGG | + | chr1_1:44682744-44682763 | Msa0023440:intron | 15.0% |
| !! | TAACATCAAATATTAATGAA+AGG | - | chr1_1:44682970-44682989 | None:intergenic | 15.0% |
| !!! | TTGTTAATAATTTTGATATC+GGG | + | chr1_1:44683093-44683112 | Msa0023440:CDS | 15.0% |
| !! | ATATTAATTGCAATTCTTTA+CGG | + | chr1_1:44683239-44683258 | Msa0023440:three_prime_UTR | 15.0% |
| !! | AAATGAGTAAAAAAAATTAC+AGG | - | chr1_1:44683281-44683300 | None:intergenic | 15.0% |
| !!! | AAATAAAAAGATGGTTTTAG+GGG | + | chr1_1:44675366-44675385 | Msa0023440:intron | 20.0% |
| !!! | CTTTTCGAAAAATAATTGTA+CGG | - | chr1_1:44675707-44675726 | None:intergenic | 20.0% |
| !! | TCAAATATCTTGAATAACAA+TGG | + | chr1_1:44675969-44675988 | Msa0023440:intron | 20.0% |
| !!! | TTTTCAATTTTTTTAGTCCA+TGG | - | chr1_1:44676211-44676230 | None:intergenic | 20.0% |
| !! | GGACTAAAAAAATTGAAAAA+AGG | + | chr1_1:44676212-44676231 | Msa0023440:intron | 20.0% |
| !!! | AAACAAGATTCTTAACTTTT+GGG | + | chr1_1:44676369-44676388 | Msa0023440:intron | 20.0% |
| !!! | TAATATTTATTTTTGCGGTT+CGG | - | chr1_1:44676738-44676757 | None:intergenic | 20.0% |
| !! | ACAAACATGGTAAAAATAAT+AGG | - | chr1_1:44676934-44676953 | None:intergenic | 20.0% |
| !!! | ATGTGATTTTTATTTTGGAT+CGG | + | chr1_1:44677121-44677140 | Msa0023440:intron | 20.0% |
| !! | TTAAACTAATAGAAAAGTCA+TGG | - | chr1_1:44677586-44677605 | None:intergenic | 20.0% |
| !! | TTAAATAAAAATTACACACG+TGG | - | chr1_1:44677759-44677778 | None:intergenic | 20.0% |
| !!! | ATTTCATGGATCAAATTTTT+CGG | + | chr1_1:44678092-44678111 | Msa0023440:intron | 20.0% |
| !! | AAATGGAAAATGATAATTAC+AGG | - | chr1_1:44678809-44678828 | None:intergenic | 20.0% |
| !! | ATTTGAAAAAGGTTCAAAAT+TGG | + | chr1_1:44679142-44679161 | Msa0023440:intron | 20.0% |
| !! | GATAAGAAGAAAATATAAAC+AGG | + | chr1_1:44679531-44679550 | Msa0023440:intron | 20.0% |
| !!! | GGTTTTGTATATTTTACAAA+TGG | - | chr1_1:44679575-44679594 | None:intergenic | 20.0% |
| !! | GAAAATTGTTTATATCTTAC+TGG | + | chr1_1:44679771-44679790 | Msa0023440:intron | 20.0% |
| !! | ATTATCTATTGTAACATTAC+AGG | + | chr1_1:44680778-44680797 | Msa0023440:intron | 20.0% |
| !! | TTAACTGCATTTGTAAAAAT+GGG | - | chr1_1:44681224-44681243 | None:intergenic | 20.0% |
| !! | ATTAACTGCATTTGTAAAAA+TGG | - | chr1_1:44681225-44681244 | None:intergenic | 20.0% |
| !!! | TCATTTTGACTGTAAAAAAA+AGG | + | chr1_1:44682249-44682268 | Msa0023440:intron | 20.0% |
| !!! | GTAAAATTTGATGATTCATA+TGG | + | chr1_1:44682549-44682568 | Msa0023440:intron | 20.0% |
| ! | AAACAAAATTTGAACCAGTT+GGG | - | chr1_1:44675009-44675028 | None:intergenic | 25.0% |
| !!! | TTTTGTTTGCATACATGATT+TGG | + | chr1_1:44675021-44675040 | Msa0023440:intron | 25.0% |
| !! | CTGCTTGTTTAGATAATTTT+TGG | - | chr1_1:44675088-44675107 | None:intergenic | 25.0% |
| ! | CAAAAATTATCTAAACAAGC+AGG | + | chr1_1:44675086-44675105 | Msa0023440:intron | 25.0% |
| ! | ATAGTCCTAGTTACTTATAA+AGG | + | chr1_1:44675317-44675336 | Msa0023440:intron | 25.0% |
| !! | TATCAATGCTTTTCTTACTA+TGG | - | chr1_1:44675464-44675483 | None:intergenic | 25.0% |
| ! | TTGATAAGATTCGATAAACT+TGG | + | chr1_1:44675478-44675497 | Msa0023440:intron | 25.0% |
| !!! | TTTGTCTCTTTTTTTGGTTT+TGG | - | chr1_1:44675510-44675529 | None:intergenic | 25.0% |
| !!! | TAGAACTTTGTCTCTTTTTT+TGG | - | chr1_1:44675516-44675535 | None:intergenic | 25.0% |
| ! | AAGATATTTGACATTCATCT+TGG | - | chr1_1:44675960-44675979 | None:intergenic | 25.0% |
| ! | AAGATATTTGACATTCATCT+TGG | - | chr1_1:44675960-44675979 | None:intergenic | 25.0% |
| ! | TTACATATATGAGTTCAAGT+GGG | - | chr1_1:44676170-44676189 | None:intergenic | 25.0% |
| ! | TATGTAACATACCATTTCAA+AGG | + | chr1_1:44676183-44676202 | Msa0023440:intron | 25.0% |
| ! | CAAAAGTTAAGAATCTTGTT+TGG | - | chr1_1:44676370-44676389 | None:intergenic | 25.0% |
| !! | CAAACAAGATTCTTAACTTT+TGG | + | chr1_1:44676368-44676387 | Msa0023440:intron | 25.0% |
| !! | AACAAGATTCTTAACTTTTG+GGG | + | chr1_1:44676370-44676389 | Msa0023440:intron | 25.0% |
| ! | AATTTGCATCGAAAATATCT+GGG | - | chr1_1:44676453-44676472 | None:intergenic | 25.0% |
| !!! | CAAATATATTCGGTTTTTTG+CGG | - | chr1_1:44676632-44676651 | None:intergenic | 25.0% |
| ! | TTTGTAAAAACTGCTAAGAT+CGG | + | chr1_1:44676670-44676689 | Msa0023440:intron | 25.0% |
| ! | CAAATATATGCGGTTTAATT+TGG | - | chr1_1:44677047-44677066 | None:intergenic | 25.0% |
| ! | CAAATTAAACCGCATATATT+TGG | + | chr1_1:44677045-44677064 | Msa0023440:intron | 25.0% |
| ! | TCCAAAATAAAAATCACATG+CGG | - | chr1_1:44677120-44677139 | None:intergenic | 25.0% |
| ! | TCTATCAATGTTAATATGCT+TGG | - | chr1_1:44677538-44677557 | None:intergenic | 25.0% |
| !!! | TCGAAAGTAGTTTTTTTATG+AGG | - | chr1_1:44677652-44677671 | None:intergenic | 25.0% |
| !! | GTATTTAAATGTTGCGATTT+TGG | - | chr1_1:44678038-44678057 | None:intergenic | 25.0% |
| ! | ATCGCAACATTTAAATACTT+AGG | + | chr1_1:44678040-44678059 | Msa0023440:intron | 25.0% |
| ! | TCGCAACATTTAAATACTTA+GGG | + | chr1_1:44678041-44678060 | Msa0023440:intron | 25.0% |
| !! | AAAATGCTTAGTTACAGTTT+TGG | - | chr1_1:44678070-44678089 | None:intergenic | 25.0% |
| !! | ACTAAGCATTTTCTATTTCA+TGG | + | chr1_1:44678078-44678097 | Msa0023440:intron | 25.0% |
| ! | TTGACAAATAGAGAGTTTAA+TGG | - | chr1_1:44678315-44678334 | None:intergenic | 25.0% |
| !! | CTTGATTTGATTATTGTTTC+AGG | + | chr1_1:44678662-44678681 | Msa0023440:intron | 25.0% |
| ! | ATTGGAACAGAAGAAAATTA+TGG | + | chr1_1:44679160-44679179 | Msa0023440:intron | 25.0% |
| ! | TTGGAACAGAAGAAAATTAT+GGG | + | chr1_1:44679161-44679180 | Msa0023440:intron | 25.0% |
| ! | TTGAAGTATAGTAATAACAG+TGG | + | chr1_1:44679184-44679203 | Msa0023440:intron | 25.0% |
| ! | TTTCTAGATGAAACAAATCT+TGG | - | chr1_1:44679423-44679442 | None:intergenic | 25.0% |
| ! | AGAGAACAATAACTAAATGA+AGG | - | chr1_1:44679596-44679615 | None:intergenic | 25.0% |
| ! | TATTCTATACCATATAAGCA+TGG | + | chr1_1:44679678-44679697 | Msa0023440:intron | 25.0% |
| ! | ATTCTATACCATATAAGCAT+GGG | + | chr1_1:44679679-44679698 | Msa0023440:intron | 25.0% |
| ! | AGAAATGACCTGATAATTAA+CGG | - | chr1_1:44679833-44679852 | None:intergenic | 25.0% |
| ! | AAGTTTCCTATTATATATGC+TGG | + | chr1_1:44679929-44679948 | Msa0023440:intron | 25.0% |
| ! | AGTTTCCTATTATATATGCT+GGG | + | chr1_1:44679930-44679949 | Msa0023440:intron | 25.0% |
| ! | CAAGACAAGAAATGTAAAAT+AGG | - | chr1_1:44680221-44680240 | None:intergenic | 25.0% |
| !! | ATGACTGATTATGGAATTTT+AGG | + | chr1_1:44680723-44680742 | Msa0023440:intron | 25.0% |
| !! | CATGCATGTTGTATATTTTT+AGG | + | chr1_1:44680968-44680987 | Msa0023440:intron | 25.0% |
| ! | ATGATAAAAGAGTGGTATAA+TGG | - | chr1_1:44681348-44681367 | None:intergenic | 25.0% |
| ! | AATTTAATCACAGAAGGAAA+GGG | - | chr1_1:44681394-44681413 | None:intergenic | 25.0% |
| ! | TAATTTAATCACAGAAGGAA+AGG | - | chr1_1:44681395-44681414 | None:intergenic | 25.0% |
| ! | AGTTGTATCATTGAAATTTG+AGG | - | chr1_1:44681490-44681509 | None:intergenic | 25.0% |
| !! | AACTATGCAATTGGTTATTT+TGG | + | chr1_1:44681555-44681574 | Msa0023440:intron | 25.0% |
| ! | TTCTTAAATTAAGTGTGCAA+AGG | - | chr1_1:44681833-44681852 | None:intergenic | 25.0% |
| ! | TAATATCATAGTTGTCAAAG+CGG | + | chr1_1:44681985-44682004 | Msa0023440:intron | 25.0% |
| ! | ATACAGAAATAGGGAAAAAA+AGG | + | chr1_1:44682591-44682610 | Msa0023440:intron | 25.0% |
| !!! | CAGTAAATTGTAACTTGTTT+TGG | - | chr1_1:44682626-44682645 | None:intergenic | 25.0% |
| ! | TTGATATAAATTCTTAGTGG+AGG | - | chr1_1:44682864-44682883 | None:intergenic | 25.0% |
| ! | CCATTGATATAAATTCTTAG+TGG | - | chr1_1:44682867-44682886 | None:intergenic | 25.0% |
| ! | CCACTAAGAATTTATATCAA+TGG | + | chr1_1:44682864-44682883 | Msa0023440:intron | 25.0% |
| ! | TTATTAACAAAACTATTCCC+TGG | - | chr1_1:44683083-44683102 | None:intergenic | 25.0% |
| ! | CAGATACTATCTTTAACAAA+TGG | - | chr1_1:44683181-44683200 | None:intergenic | 25.0% |
| !!! | GATGTTTTACTTTTATACAC+TGG | - | chr1_1:44683342-44683361 | None:intergenic | 25.0% |
| ! | AAAAGTAAAACATCTATCGT+AGG | + | chr1_1:44683348-44683367 | Msa0023440:three_prime_UTR | 25.0% |
| !! | TAAAATTTTACAACACCTGT+AGG | - | chr1_1:44683387-44683406 | None:intergenic | 25.0% |
| ! | TATCCAATCCTTAATGAATA+GGG | - | chr1_1:44683465-44683484 | None:intergenic | 25.0% |
| ! | ATATCCAATCCTTAATGAAT+AGG | - | chr1_1:44683466-44683485 | None:intergenic | 25.0% |
| CAAACAAAATTTGAACCAGT+TGG | - | chr1_1:44675010-44675029 | None:intergenic | 30.0% | |
| AAATTATCTAAACAAGCAGG+TGG | + | chr1_1:44675089-44675108 | Msa0023440:intron | 30.0% | |
| AATTATCTAAACAAGCAGGT+GGG | + | chr1_1:44675090-44675109 | Msa0023440:intron | 30.0% | |
| TGAGTCCTTTATAAGTAACT+AGG | - | chr1_1:44675325-44675344 | None:intergenic | 30.0% | |
| ACACTCACTTTCAATCTAAA+AGG | + | chr1_1:44675413-44675432 | Msa0023440:intron | 30.0% | |
| ATTCCCAAAATGAGAAGAAA+AGG | + | chr1_1:44675803-44675822 | Msa0023440:intron | 30.0% | |
| ! | GAACCTTTTCTTCTCATTTT+GGG | - | chr1_1:44675809-44675828 | None:intergenic | 30.0% |
| ! | AGAACCTTTTCTTCTCATTT+TGG | - | chr1_1:44675810-44675829 | None:intergenic | 30.0% |
| CCAAATGAAATCAAATCCAA+AGG | - | chr1_1:44675884-44675903 | None:intergenic | 30.0% | |
| ! | CCTTTGGATTTGATTTCATT+TGG | + | chr1_1:44675881-44675900 | Msa0023440:intron | 30.0% |
| TATTTGACATTCATCTTGGA+TGG | - | chr1_1:44675956-44675975 | None:intergenic | 30.0% | |
| CCAAATGAAATCAAATCCAA+AGG | - | chr1_1:44675884-44675903 | None:intergenic | 30.0% | |
| ! | CCTTTGGATTTGATTTCATT+TGG | + | chr1_1:44675881-44675900 | Msa0023440:intron | 30.0% |
| TATTTGACATTCATCTTGGA+TGG | - | chr1_1:44675956-44675975 | None:intergenic | 30.0% | |
| GTTACATATATGAGTTCAAG+TGG | - | chr1_1:44676171-44676190 | None:intergenic | 30.0% | |
| CTAATGATCACATCAATAGT+AGG | + | chr1_1:44676284-44676303 | Msa0023440:intron | 30.0% | |
| ! | AGTTAAGAATCTTGTTTGGA+GGG | - | chr1_1:44676366-44676385 | None:intergenic | 30.0% |
| ! | AAGTTAAGAATCTTGTTTGG+AGG | - | chr1_1:44676367-44676386 | None:intergenic | 30.0% |
| ! | ACAAGATTCTTAACTTTTGG+GGG | + | chr1_1:44676371-44676390 | Msa0023440:intron | 30.0% |
| !! | TGTTCCATATCGATTTCAAA+TGG | + | chr1_1:44676402-44676421 | Msa0023440:intron | 30.0% |
| GAATTTGCATCGAAAATATC+TGG | - | chr1_1:44676454-44676473 | None:intergenic | 30.0% | |
| !!! | TTTGCGGTTTTATTTTGGAT+CGG | - | chr1_1:44676588-44676607 | None:intergenic | 30.0% |
| CGCAAAAAACCGAATATATT+TGG | + | chr1_1:44676630-44676649 | Msa0023440:intron | 30.0% | |
| CAAACGCATCCAAATATATT+CGG | - | chr1_1:44676642-44676661 | None:intergenic | 30.0% | |
| !!! | GTTTAATTTGGATCGGTTTT+TGG | - | chr1_1:44677035-44677054 | None:intergenic | 30.0% |
| !! | ATATGCGGTTTAATTTGGAT+CGG | - | chr1_1:44677042-44677061 | None:intergenic | 30.0% |
| TAAACCGCATATATTTGGAT+CGG | + | chr1_1:44677050-44677069 | Msa0023440:intron | 30.0% | |
| AATAAAAATCACATGCGGTT+CGG | - | chr1_1:44677115-44677134 | None:intergenic | 30.0% | |
| !! | ACCGCATGTGATTTTTATTT+TGG | + | chr1_1:44677116-44677135 | Msa0023440:intron | 30.0% |
| AGCATCTGTGGTTATTAAAT+GGG | - | chr1_1:44677342-44677361 | None:intergenic | 30.0% | |
| CTTTAAATATTTGCTCCACT+AGG | + | chr1_1:44677509-44677528 | Msa0023440:intron | 30.0% | |
| AACTAATAGAAAAGTCATGG+AGG | - | chr1_1:44677583-44677602 | None:intergenic | 30.0% | |
| ! | TCGTAACTTTTGGATACTTA+GGG | - | chr1_1:44677623-44677642 | None:intergenic | 30.0% |
| ! | ATCGTAACTTTTGGATACTT+AGG | - | chr1_1:44677624-44677643 | None:intergenic | 30.0% |
| ! | GTATCCAAAAGTTACGATTT+TGG | + | chr1_1:44677626-44677645 | Msa0023440:intron | 30.0% |
| ATTATTAACGCATTTACACG+TGG | - | chr1_1:44677798-44677817 | None:intergenic | 30.0% | |
| CGCAACATTTAAATACTTAG+GGG | + | chr1_1:44678042-44678061 | Msa0023440:intron | 30.0% | |
| GCAACATTTAAATACTTAGG+GGG | + | chr1_1:44678043-44678062 | Msa0023440:intron | 30.0% | |
| CAACATTTAAATACTTAGGG+GGG | + | chr1_1:44678044-44678063 | Msa0023440:intron | 30.0% | |
| !!! | TTTTTTTTGTAGGGGAAGAT+AGG | - | chr1_1:44678419-44678438 | None:intergenic | 30.0% |
| TAGAAGAGAGAAACAAAATC+TGG | + | chr1_1:44678490-44678509 | Msa0023440:intron | 30.0% | |
| AGAAGAGAGAAACAAAATCT+GGG | + | chr1_1:44678491-44678510 | Msa0023440:intron | 30.0% | |
| AGAACGTAAGTTACAAGATT+AGG | + | chr1_1:44678593-44678612 | Msa0023440:intron | 30.0% | |
| ATCAAATTGCAAGTAGCAAA+TGG | - | chr1_1:44678826-44678845 | None:intergenic | 30.0% | |
| ATAAGCTGTTTATCCAAACA+GGG | - | chr1_1:44678874-44678893 | None:intergenic | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | - | chr1_1:44678875-44678894 | None:intergenic | 30.0% | |
| !! | AAAAGTTTTGTAGCTTTCCA+AGG | + | chr1_1:44679070-44679089 | Msa0023440:intron | 30.0% |
| !! | AAAGTTTTGTAGCTTTCCAA+GGG | + | chr1_1:44679071-44679090 | Msa0023440:intron | 30.0% |
| !! | TTGAGAGATGGTTTACTTTT+AGG | + | chr1_1:44679449-44679468 | Msa0023440:intron | 30.0% |
| !!! | TTTTAGGTTTGCAGATTTTG+TGG | + | chr1_1:44679465-44679484 | Msa0023440:intron | 30.0% |
| ! | GCAGATTTTGTGGTTTTTTA+AGG | + | chr1_1:44679475-44679494 | Msa0023440:intron | 30.0% |
| TTCTATACCATATAAGCATG+GGG | + | chr1_1:44679680-44679699 | Msa0023440:intron | 30.0% | |
| GTTTCCTATTATATATGCTG+GGG | + | chr1_1:44679931-44679950 | Msa0023440:intron | 30.0% | |
| ! | TGATAGCATTTGTTCAGTTT+TGG | + | chr1_1:44680024-44680043 | Msa0023440:intron | 30.0% |
| !! | TTTTTATTTGGACAGTGCAA+AGG | + | chr1_1:44680097-44680116 | Msa0023440:intron | 30.0% |
| !! | TTTTATTTGGACAGTGCAAA+GGG | + | chr1_1:44680098-44680117 | Msa0023440:intron | 30.0% |
| CACAAAAAACTTCATAGACT+AGG | - | chr1_1:44680407-44680426 | None:intergenic | 30.0% | |
| ! | TTTTTGTGTAAACCTGATTC+AGG | + | chr1_1:44680419-44680438 | Msa0023440:intron | 30.0% |
| !! | TTTTAGGTCCTTCTTTGTAA+TGG | + | chr1_1:44680739-44680758 | Msa0023440:intron | 30.0% |
| TTTATGTATCAGATATCTCG+AGG | + | chr1_1:44681050-44681069 | Msa0023440:CDS | 30.0% | |
| AATCCAGTATCCTTCTTATA+GGG | + | chr1_1:44681075-44681094 | Msa0023440:CDS | 30.0% | |
| !! | CTTAAATCATCACTTTTGGA+GGG | + | chr1_1:44681175-44681194 | Msa0023440:CDS | 30.0% |
| AAAAATAGCACATTCGTAGA+AGG | - | chr1_1:44681283-44681302 | None:intergenic | 30.0% | |
| AATGGAACATGATAAAAGAG+TGG | - | chr1_1:44681356-44681375 | None:intergenic | 30.0% | |
| GGGAAAAACAGAAGAAAAAA+TGG | - | chr1_1:44681374-44681393 | None:intergenic | 30.0% | |
| CCAGATAATTTAATCACAGA+AGG | - | chr1_1:44681400-44681419 | None:intergenic | 30.0% | |
| CCTTCTGTGATTAAATTATC+TGG | + | chr1_1:44681397-44681416 | Msa0023440:intron | 30.0% | |
| ! | AACCAATTGCATAGTTTGTA+CGG | - | chr1_1:44681551-44681570 | None:intergenic | 30.0% |
| ATTATAAATAAAGGGCAACC+CGG | + | chr1_1:44681660-44681679 | Msa0023440:intron | 30.0% | |
| TCTTGTATAAAAACAGGGTA+AGG | - | chr1_1:44681752-44681771 | None:intergenic | 30.0% | |
| !!! | TTACCCTGTTTTTATACAAG+AGG | + | chr1_1:44681751-44681770 | Msa0023440:intron | 30.0% |
| TATCCATAGACATGTATACA+AGG | - | chr1_1:44681858-44681877 | None:intergenic | 30.0% | |
| GTCTAAATAGTTCAAATGCA+GGG | - | chr1_1:44681963-44681982 | None:intergenic | 30.0% | |
| TGTCTAAATAGTTCAAATGC+AGG | - | chr1_1:44681964-44681983 | None:intergenic | 30.0% | |
| CAGTCAAAATGAAGAAGAAA+GGG | - | chr1_1:44682241-44682260 | None:intergenic | 30.0% | |
| ACAGTCAAAATGAAGAAGAA+AGG | - | chr1_1:44682242-44682261 | None:intergenic | 30.0% | |
| TTTCATTGGAAACCTAAATG+AGG | + | chr1_1:44682758-44682777 | Msa0023440:intron | 30.0% | |
| GTTAAAGATAGTATCTGTTC+TGG | + | chr1_1:44683184-44683203 | Msa0023440:three_prime_UTR | 30.0% | |
| TTAATTGCAATTCTTTACGG+AGG | + | chr1_1:44683242-44683261 | Msa0023440:three_prime_UTR | 30.0% | |
| !!! | GGTTTTAATTTTGATCCTAC+AGG | + | chr1_1:44683369-44683388 | Msa0023440:three_prime_UTR | 30.0% |
| ATTATCTAAACAAGCAGGTG+GGG | + | chr1_1:44675091-44675110 | Msa0023440:intron | 35.0% | |
| TAATATCCACAAGCCTATGA+TGG | - | chr1_1:44675175-44675194 | None:intergenic | 35.0% | |
| CATAGGCTTGTGGATATTAT+TGG | + | chr1_1:44675176-44675195 | Msa0023440:intron | 35.0% | |
| !!! | AAAAGATGGTTTTAGGGGAA+AGG | + | chr1_1:44675371-44675390 | Msa0023440:intron | 35.0% |
| ! | CAATGCTTTTCTTACTATGG+TGG | - | chr1_1:44675461-44675480 | None:intergenic | 35.0% |
| TCTTGCTCTAATGAACTCAA+TGG | + | chr1_1:44675618-44675637 | Msa0023440:intron | 35.0% | |
| TCTCCAATAAAAGTCTTACG+TGG | + | chr1_1:44675927-44675946 | Msa0023440:intron | 35.0% | |
| ! | AGTCCACGTAAGACTTTTAT+TGG | - | chr1_1:44675933-44675952 | None:intergenic | 35.0% |
| TCTCCAATAAAAGTCTTACG+TGG | + | chr1_1:44675927-44675946 | Msa0023440:intron | 35.0% | |
| ! | AGTCCACGTAAGACTTTTAT+TGG | - | chr1_1:44675933-44675952 | None:intergenic | 35.0% |
| TTCAAGTGGGAAATAAGTCA+TGG | - | chr1_1:44676157-44676176 | None:intergenic | 35.0% | |
| ATACCATTTCAAAGGAACCA+TGG | + | chr1_1:44676191-44676210 | Msa0023440:intron | 35.0% | |
| TCATTAGCTCATTAAGCATG+TGG | - | chr1_1:44676271-44676290 | None:intergenic | 35.0% | |
| ! | CTAGCCATTTGAAATCGATA+TGG | - | chr1_1:44676409-44676428 | None:intergenic | 35.0% |
| !! | CATATCGATTTCAAATGGCT+AGG | + | chr1_1:44676407-44676426 | Msa0023440:intron | 35.0% |
| TACACATATGTTGTGACTAG+AGG | + | chr1_1:44676524-44676543 | Msa0023440:intron | 35.0% | |
| GTTGTGACTAGAGGAAAAAA+AGG | + | chr1_1:44676533-44676552 | Msa0023440:intron | 35.0% | |
| !! | AAAAAAAGGAGTGCTGAGTA+GGG | + | chr1_1:44676547-44676566 | Msa0023440:intron | 35.0% |
| !!! | GGTTTTATTTTGGATCGGTT+TGG | - | chr1_1:44676583-44676602 | None:intergenic | 35.0% |
| !!! | ATCGGTTTGCGGTTTTATTT+TGG | - | chr1_1:44676593-44676612 | None:intergenic | 35.0% |
| !!! | GGTTTTCGGTTTTTTTGGAT+CGG | - | chr1_1:44676611-44676630 | None:intergenic | 35.0% |
| ! | TTTGCGGTTTTCGGTTTTTT+TGG | - | chr1_1:44676616-44676635 | None:intergenic | 35.0% |
| !!! | ATTCGGTTTTTTGCGGTTTT+CGG | - | chr1_1:44676625-44676644 | None:intergenic | 35.0% |
| CGAATATATTTGGATGCGTT+TGG | + | chr1_1:44676640-44676659 | Msa0023440:intron | 35.0% | |
| AAAAACTGCTAAGATCGGAT+CGG | + | chr1_1:44676675-44676694 | Msa0023440:intron | 35.0% | |
| !!! | TTTATTTTTGCGGTTCGGTT+CGG | - | chr1_1:44676733-44676752 | None:intergenic | 35.0% |
| ACTTTCAATTCTCAGCACTA+GGG | - | chr1_1:44677191-44677210 | None:intergenic | 35.0% | |
| ! | CTGAGAATTGAAAGTGTAGT+AGG | + | chr1_1:44677196-44677215 | Msa0023440:intron | 35.0% |
| ! | AGAATTGAAAGTGTAGTAGG+TGG | + | chr1_1:44677199-44677218 | Msa0023440:intron | 35.0% |
| GCATCTGTGGTTATTAAATG+GGG | - | chr1_1:44677341-44677360 | None:intergenic | 35.0% | |
| GAGCATCTGTGGTTATTAAA+TGG | - | chr1_1:44677343-44677362 | None:intergenic | 35.0% | |
| ATGCGTAAAGATTCCTTTGA+TGG | - | chr1_1:44677365-44677384 | None:intergenic | 35.0% | |
| AAAGAATGTGGTTCAACAAG+GGG | - | chr1_1:44677407-44677426 | None:intergenic | 35.0% | |
| CAAAGAATGTGGTTCAACAA+GGG | - | chr1_1:44677408-44677427 | None:intergenic | 35.0% | |
| !!! | CATTTTTAGCGCAAAGAATG+TGG | - | chr1_1:44677419-44677438 | None:intergenic | 35.0% |
| AACTTTGGATCCAAAGAAGT+CGG | + | chr1_1:44677468-44677487 | Msa0023440:intron | 35.0% | |
| ! | TCATGGAGGAATGAGTTTTA+AGG | - | chr1_1:44677569-44677588 | None:intergenic | 35.0% |
| ! | GTAACTTTTGGATACTTAGG+GGG | - | chr1_1:44677621-44677640 | None:intergenic | 35.0% |
| ! | CGTAACTTTTGGATACTTAG+GGG | - | chr1_1:44677622-44677641 | None:intergenic | 35.0% |
| TAAATGGGGGTAAACATAGA+GGG | - | chr1_1:44677676-44677695 | None:intergenic | 35.0% | |
| ! | TTTACCCCCATTTACAGTTT+TGG | + | chr1_1:44677682-44677701 | Msa0023440:intron | 35.0% |
| !! | ATGCATTGACTGGTCAAAAT+TGG | - | chr1_1:44677716-44677735 | None:intergenic | 35.0% |
| ! | TTTAGCCTCTTTTGCAGTTT+TGG | - | chr1_1:44677978-44677997 | None:intergenic | 35.0% |
| TGCAAAAGAGGCTAAACATA+GGG | + | chr1_1:44677982-44678001 | Msa0023440:intron | 35.0% | |
| AATGTTTGTGTAAGGACATG+AGG | - | chr1_1:44678177-44678196 | None:intergenic | 35.0% | |
| GAGCAACAAATGTTTGTGTA+AGG | - | chr1_1:44678185-44678204 | None:intergenic | 35.0% | |
| GCAACAATGAAAGCAAGTAA+TGG | - | chr1_1:44678708-44678727 | None:intergenic | 35.0% | |
| ATTGCAAAGACTACTCCATT+GGG | - | chr1_1:44678744-44678763 | None:intergenic | 35.0% | |
| AATTGCAAAGACTACTCCAT+TGG | - | chr1_1:44678745-44678764 | None:intergenic | 35.0% | |
| GGTTATAATGAGATGACCAA+AGG | - | chr1_1:44678788-44678807 | None:intergenic | 35.0% | |
| TCAAATAAGTCGATCCAAAC+CGG | + | chr1_1:44679038-44679057 | Msa0023440:intron | 35.0% | |
| ACTATCAATTCCTAAACCCT+TGG | - | chr1_1:44679090-44679109 | None:intergenic | 35.0% | |
| ! | AATTGATAGTAAAAGACGCG+TGG | + | chr1_1:44679100-44679119 | Msa0023440:intron | 35.0% |
| !! | ACCTGTGTTTTTGTAGCTTT+AGG | + | chr1_1:44679210-44679229 | Msa0023440:intron | 35.0% |
| ACCTAAAGCTACAAAAACAC+AGG | - | chr1_1:44679214-44679233 | None:intergenic | 35.0% | |
| ! | TATGAATTGCCACAACGTTT+TGG | + | chr1_1:44679239-44679258 | Msa0023440:intron | 35.0% |
| TGAAACAAATCTTGGTCTCA+CGG | - | chr1_1:44679415-44679434 | None:intergenic | 35.0% | |
| TAGAAATCGAACTTGAGAGA+TGG | + | chr1_1:44679437-44679456 | Msa0023440:intron | 35.0% | |
| TGTTCTCTACTTGTCTTTAG+TGG | + | chr1_1:44679608-44679627 | Msa0023440:intron | 35.0% | |
| TAGATGCTTCTTGTAGTAGT+AGG | + | chr1_1:44679648-44679667 | Msa0023440:intron | 35.0% | |
| AATACAACCCCATGCTTATA+TGG | - | chr1_1:44679690-44679709 | None:intergenic | 35.0% | |
| TCCTTGAGTATTCATGTCTT+AGG | + | chr1_1:44679722-44679741 | Msa0023440:intron | 35.0% | |
| ACCTAAGACATGAATACTCA+AGG | - | chr1_1:44679726-44679745 | None:intergenic | 35.0% | |
| CAGATAAAACAGACTTTGCT+AGG | - | chr1_1:44679864-44679883 | None:intergenic | 35.0% | |
| !! | AAGTCTGTTTTATCTGAAGC+AGG | + | chr1_1:44679868-44679887 | Msa0023440:CDS | 35.0% |
| AGAACCCCAGCATATATAAT+AGG | - | chr1_1:44679938-44679957 | None:intergenic | 35.0% | |
| TGAAACATATGGAAATGCCA+TGG | - | chr1_1:44680528-44680547 | None:intergenic | 35.0% | |
| AATTCCTAAATCATCTCCAC+AGG | - | chr1_1:44680603-44680622 | None:intergenic | 35.0% | |
| TGTGGAGATGATTTAGGAAT+TGG | + | chr1_1:44680602-44680621 | Msa0023440:CDS | 35.0% | |
| TCATGTGACATGACTGATTA+TGG | + | chr1_1:44680714-44680733 | Msa0023440:intron | 35.0% | |
| TCATGCAACCATTACAAAGA+AGG | - | chr1_1:44680750-44680769 | None:intergenic | 35.0% | |
| ! | TCAACATTTTGTGAAGCTTG+AGG | - | chr1_1:44680872-44680891 | None:intergenic | 35.0% |
| TACATCTACTTCAGGGTTAT+GGG | + | chr1_1:44680910-44680929 | Msa0023440:intron | 35.0% | |
| AGCAATGGTAAGAATATGTC+AGG | - | chr1_1:44680941-44680960 | None:intergenic | 35.0% | |
| CAATCCAGTATCCTTCTTAT+AGG | + | chr1_1:44681074-44681093 | Msa0023440:CDS | 35.0% | |
| ! | TTTCTAGCAGAAAGTACAAC+AGG | + | chr1_1:44681109-44681128 | Msa0023440:CDS | 35.0% |
| ! | TTCTAGCAGAAAGTACAACA+GGG | + | chr1_1:44681110-44681129 | Msa0023440:CDS | 35.0% |
| CCAAAAGTGATGATTTAAGC+TGG | - | chr1_1:44681174-44681193 | None:intergenic | 35.0% | |
| ! | CCAGCTTAAATCATCACTTT+TGG | + | chr1_1:44681171-44681190 | Msa0023440:CDS | 35.0% |
| !! | GCTTAAATCATCACTTTTGG+AGG | + | chr1_1:44681174-44681193 | Msa0023440:CDS | 35.0% |
| ATGCATATGAAGTGTACTTG+TGG | - | chr1_1:44681425-44681444 | None:intergenic | 35.0% | |
| TACGGAAGCGAATAAAGAAA+AGG | - | chr1_1:44681533-44681552 | None:intergenic | 35.0% | |
| TTCCGTACAAACTATGCAAT+TGG | + | chr1_1:44681546-44681565 | Msa0023440:intron | 35.0% | |
| TGTTCACGTATCAGATTGAA+GGG | - | chr1_1:44681637-44681656 | None:intergenic | 35.0% | |
| ATGTTCACGTATCAGATTGA+AGG | - | chr1_1:44681638-44681657 | None:intergenic | 35.0% | |
| CAGCCTCTTGTATAAAAACA+GGG | - | chr1_1:44681757-44681776 | None:intergenic | 35.0% | |
| ACAGCCTCTTGTATAAAAAC+AGG | - | chr1_1:44681758-44681777 | None:intergenic | 35.0% | |
| !!! | ATGTTCACGTATTTTAGTCC+TGG | - | chr1_1:44681783-44681802 | None:intergenic | 35.0% |
| AGACCTTGTATACATGTCTA+TGG | + | chr1_1:44681852-44681871 | Msa0023440:intron | 35.0% | |
| CTATGGATAGACTATTGTTG+AGG | + | chr1_1:44681869-44681888 | Msa0023440:intron | 35.0% | |
| GGAAGAAGTGAAAGATTGAT+TGG | - | chr1_1:44682220-44682239 | None:intergenic | 35.0% | |
| ! | AGAACAGAGATGAGATTTTG+TGG | + | chr1_1:44682283-44682302 | Msa0023440:intron | 35.0% |
| TTACTCTCTGTTGTCAATAG+CGG | - | chr1_1:44682495-44682514 | None:intergenic | 35.0% | |
| GTGATTAAAACAATGAGTCG+AGG | - | chr1_1:44682993-44683012 | None:intergenic | 35.0% | |
| TCACTTTGCTGATATAGTGT+TGG | + | chr1_1:44683009-44683028 | Msa0023440:intron | 35.0% | |
| ATCACAAAAGCAACATCATC+AGG | - | chr1_1:44683057-44683076 | None:intergenic | 35.0% | |
| !!! | TGTTGCTTTTGTGATAATCC+AGG | + | chr1_1:44683062-44683081 | Msa0023440:intron | 35.0% |
| !!! | GTTGCTTTTGTGATAATCCA+GGG | + | chr1_1:44683063-44683082 | Msa0023440:intron | 35.0% |
| TGTCTGAACCCTATTCATTA+AGG | + | chr1_1:44683454-44683473 | Msa0023440:three_prime_UTR | 35.0% | |
| GAACCCTATTCATTAAGGAT+TGG | + | chr1_1:44683459-44683478 | Msa0023440:three_prime_UTR | 35.0% | |
| ! | TACTGTTAGTTTCTTTCTGC+TGG | + | chr1_1:44683485-44683504 | Msa0023440:three_prime_UTR | 35.0% |
| CCATTTCGCCTTCAAATTAA+GGG | - | chr1_1:44683542-44683561 | None:intergenic | 35.0% | |
| TCTTCATGTTCAAACCCAAC+TGG | + | chr1_1:44674992-44675011 | Msa0023440:intron | 40.0% | |
| CTTGCTCTTCTTTCCATCAT+AGG | + | chr1_1:44675159-44675178 | Msa0023440:intron | 40.0% | |
| TTCTTTCCATCATAGGCTTG+TGG | + | chr1_1:44675166-44675185 | Msa0023440:intron | 40.0% | |
| !!! | ATGGTTTTAGGGGAAAGGAA+TGG | + | chr1_1:44675376-44675395 | Msa0023440:intron | 40.0% |
| TTTCCTTCATGAGTAGTGCA+TGG | + | chr1_1:44675846-44675865 | Msa0023440:intron | 40.0% | |
| ATGGTGGTCTTCATTTCCTT+TGG | + | chr1_1:44675865-44675884 | Msa0023440:intron | 40.0% | |
| TTTCCTTCATGAGTAGTGCA+TGG | + | chr1_1:44675846-44675865 | Msa0023440:intron | 40.0% | |
| ATGGTGGTCTTCATTTCCTT+TGG | + | chr1_1:44675865-44675884 | Msa0023440:intron | 40.0% | |
| ! | AGTCCATGGTTCCTTTGAAA+TGG | - | chr1_1:44676197-44676216 | None:intergenic | 40.0% |
| !! | GAAAAAAAGGAGTGCTGAGT+AGG | + | chr1_1:44676546-44676565 | Msa0023440:intron | 40.0% |
| !! | AAAAAAGGAGTGCTGAGTAG+GGG | + | chr1_1:44676548-44676567 | Msa0023440:intron | 40.0% |
| !!! | GGTTTTTTTGGATCGGTTTG+CGG | - | chr1_1:44676604-44676623 | None:intergenic | 40.0% |
| CGAACCGATCCAAATATATG+CGG | - | chr1_1:44677057-44677076 | None:intergenic | 40.0% | |
| CGCATATATTTGGATCGGTT+CGG | + | chr1_1:44677055-44677074 | Msa0023440:intron | 40.0% | |
| !! | ATATTTGGATCGGTTCGGTT+CGG | + | chr1_1:44677060-44677079 | Msa0023440:intron | 40.0% |
| CTTTCAATTCTCAGCACTAG+GGG | - | chr1_1:44677190-44677209 | None:intergenic | 40.0% | |
| CACTTTCAATTCTCAGCACT+AGG | - | chr1_1:44677192-44677211 | None:intergenic | 40.0% | |
| GCAAAGAATGTGGTTCAACA+AGG | - | chr1_1:44677409-44677428 | None:intergenic | 40.0% | |
| GACTTCTTTGGATCCAAAGT+TGG | - | chr1_1:44677469-44677488 | None:intergenic | 40.0% | |
| ATCCAAAGAAGTCGGTATGT+GGG | + | chr1_1:44677476-44677495 | Msa0023440:intron | 40.0% | |
| ! | TAATATGCTTGGTAGCCTAG+TGG | - | chr1_1:44677527-44677546 | None:intergenic | 40.0% |
| ! | GAGGCCAAAATCGTAACTTT+TGG | - | chr1_1:44677633-44677652 | None:intergenic | 40.0% |
| GTAAATGGGGGTAAACATAG+AGG | - | chr1_1:44677677-44677696 | None:intergenic | 40.0% | |
| ! | TGACTGGTCAAAATTGGACT+GGG | - | chr1_1:44677710-44677729 | None:intergenic | 40.0% |
| ! | TTGACTGGTCAAAATTGGAC+TGG | - | chr1_1:44677711-44677730 | None:intergenic | 40.0% |
| TTGACCAGTCAATGCATACA+TGG | + | chr1_1:44677719-44677738 | Msa0023440:intron | 40.0% | |
| CTGCAAAAGAGGCTAAACAT+AGG | + | chr1_1:44677981-44678000 | Msa0023440:intron | 40.0% | |
| GCAAAAGAGGCTAAACATAG+GGG | + | chr1_1:44677983-44678002 | Msa0023440:intron | 40.0% | |
| CAAAAGAGGCTAAACATAGG+GGG | + | chr1_1:44677984-44678003 | Msa0023440:intron | 40.0% | |
| AGTAATGGCATCATCATCGT+TGG | - | chr1_1:44678693-44678712 | None:intergenic | 40.0% | |
| !! | GCTTCACTTTTCATTCCCAA+TGG | + | chr1_1:44678726-44678745 | Msa0023440:CDS | 40.0% |
| ATGAGATGACCAAAGGAATG+CGG | - | chr1_1:44678781-44678800 | None:intergenic | 40.0% | |
| TGCTAGATTTATGCCCTGTT+TGG | + | chr1_1:44678858-44678877 | Msa0023440:intron | 40.0% | |
| ! | CAAAACTTTTCTATCTCCGC+CGG | - | chr1_1:44679060-44679079 | None:intergenic | 40.0% |
| TTGTAGCTTTCCAAGGGTTT+AGG | + | chr1_1:44679077-44679096 | Msa0023440:intron | 40.0% | |
| TGTGATGAACCAAAACGTTG+TGG | - | chr1_1:44679251-44679270 | None:intergenic | 40.0% | |
| !!! | ACAACGTTTTGGTTCATCAC+AGG | + | chr1_1:44679250-44679269 | Msa0023440:intron | 40.0% |
| !!! | GTTTTGGTTCATCACAGGTA+TGG | + | chr1_1:44679255-44679274 | Msa0023440:intron | 40.0% |
| !!! | ATGCTGGGGGATAGATTTTT+TGG | + | chr1_1:44679280-44679299 | Msa0023440:intron | 40.0% |
| TGTTAATCCTCTGCTTTCCA+GGG | + | chr1_1:44679360-44679379 | Msa0023440:intron | 40.0% | |
| ATATCTTACTGGACCTTTGC+AGG | + | chr1_1:44679782-44679801 | Msa0023440:intron | 40.0% | |
| !! | GATCTCAGACAATGGATTGA+AGG | + | chr1_1:44679804-44679823 | Msa0023440:CDS | 40.0% |
| GAAGGACTCCGTTAATTATC+AGG | + | chr1_1:44679822-44679841 | Msa0023440:CDS | 40.0% | |
| ACAGACTTTGCTAGGTCTTT+CGG | - | chr1_1:44679856-44679875 | None:intergenic | 40.0% | |
| !! | CTGTTTTATCTGAAGCAGGA+TGG | + | chr1_1:44679872-44679891 | Msa0023440:CDS | 40.0% |
| ! | AGCAGGATGGTCAAATTTTC+TGG | + | chr1_1:44679885-44679904 | Msa0023440:CDS | 40.0% |
| ! | TTCTATCATTGCTGTTGCTG+CGG | + | chr1_1:44680051-44680070 | Msa0023440:intron | 40.0% |
| GTGCAAAGGGAAGAAATTTC+AGG | + | chr1_1:44680111-44680130 | Msa0023440:intron | 40.0% | |
| GATCTGGCACTTCTATTTGT+TGG | + | chr1_1:44680142-44680161 | Msa0023440:CDS | 40.0% | |
| ! | ACTTCTATTTGTTGGTGGAG+AGG | + | chr1_1:44680150-44680169 | Msa0023440:CDS | 40.0% |
| TCTGAAGACTGTAACTGCAA+AGG | - | chr1_1:44680313-44680332 | None:intergenic | 40.0% | |
| AAGAATCCTGCTCATGACAA+TGG | - | chr1_1:44680487-44680506 | None:intergenic | 40.0% | |
| TCCATATGTTTCAGCATCAG+AGG | + | chr1_1:44680535-44680554 | Msa0023440:CDS | 40.0% | |
| TCCTCTGATGCTGAAACATA+TGG | - | chr1_1:44680539-44680558 | None:intergenic | 40.0% | |
| TGTGAACTTGGAAGACTCAT+TGG | + | chr1_1:44680559-44680578 | Msa0023440:CDS | 40.0% | |
| !! | TTGGAAGACTCATTGGTTTC+AGG | + | chr1_1:44680566-44680585 | Msa0023440:CDS | 40.0% |
| TTTCCTTGGATCTTGCTCTA+TGG | + | chr1_1:44680634-44680653 | Msa0023440:CDS | 40.0% | |
| TTCCTTGGATCTTGCTCTAT+GGG | + | chr1_1:44680635-44680654 | Msa0023440:CDS | 40.0% | |
| TTCCTTCCTCTTGGTCAAAT+AGG | - | chr1_1:44680804-44680823 | None:intergenic | 40.0% | |
| ! | CCAAATCTGTTTTCCCTTTG+TGG | - | chr1_1:44680832-44680851 | None:intergenic | 40.0% |
| CCACAAAGGGAAAACAGATT+TGG | + | chr1_1:44680829-44680848 | Msa0023440:CDS | 40.0% | |
| ! | GATTTGGTTGTGTTCTGCAA+TGG | + | chr1_1:44680845-44680864 | Msa0023440:CDS | 40.0% |
| GTTGACAGAACACAATCTGA+AGG | + | chr1_1:44680887-44680906 | Msa0023440:CDS | 40.0% | |
| ! | TCTGAAGGTACATCTACTTC+AGG | + | chr1_1:44680902-44680921 | Msa0023440:intron | 40.0% |
| ! | CTGAAGGTACATCTACTTCA+GGG | + | chr1_1:44680903-44680922 | Msa0023440:intron | 40.0% |
| GTACATCTACTTCAGGGTTA+TGG | + | chr1_1:44680909-44680928 | Msa0023440:intron | 40.0% | |
| GATCCCTATAAGAAGGATAC+TGG | - | chr1_1:44681081-44681100 | None:intergenic | 40.0% | |
| CTTTGCAGATCCCTATAAGA+AGG | - | chr1_1:44681088-44681107 | None:intergenic | 40.0% | |
| CTTCTTATAGGGATCTGCAA+AGG | + | chr1_1:44681086-44681105 | Msa0023440:CDS | 40.0% | |
| ACCAATTCTACAGCTTGTGA+TGG | + | chr1_1:44681142-44681161 | Msa0023440:CDS | 40.0% | |
| TCCATCACAAGCTGTAGAAT+TGG | - | chr1_1:44681146-44681165 | None:intergenic | 40.0% | |
| !! | ACTTTTGGAGGGACTTTTAG+TGG | + | chr1_1:44681186-44681205 | Msa0023440:CDS | 40.0% |
| CGTACAATACACCAAATGGT+GGG | - | chr1_1:44681726-44681745 | None:intergenic | 40.0% | |
| ! | TTATACAAGAGGCTGTTTCC+AGG | + | chr1_1:44681762-44681781 | Msa0023440:intron | 40.0% |
| TGCATCAACTGATCCTCAAA+TGG | + | chr1_1:44681910-44681929 | Msa0023440:intron | 40.0% | |
| AACAAGACGTCTACCATTTG+AGG | - | chr1_1:44681926-44681945 | None:intergenic | 40.0% | |
| ! | CAAATGGTAGACGTCTTGTT+TGG | + | chr1_1:44681926-44681945 | Msa0023440:intron | 40.0% |
| !! | TAGACGTCTTGTTTGGACTT+TGG | + | chr1_1:44681933-44681952 | Msa0023440:intron | 40.0% |
| GATTGGAGATCTAGAGATCT+AGG | - | chr1_1:44682203-44682222 | None:intergenic | 40.0% | |
| ACGTGTAAGACACCTCATTT+AGG | - | chr1_1:44682773-44682792 | None:intergenic | 40.0% | |
| GTTAGATACGAGACACACAA+AGG | + | chr1_1:44682816-44682835 | Msa0023440:intron | 40.0% | |
| CAATTCCCATCATACAGCAA+AGG | - | chr1_1:44683119-44683138 | None:intergenic | 40.0% | |
| CAAATGGATCATCACTCTTG+TGG | - | chr1_1:44683165-44683184 | None:intergenic | 40.0% | |
| ATAGTATCTGTTCTGGTGCT+GGG | + | chr1_1:44683191-44683210 | Msa0023440:three_prime_UTR | 40.0% | |
| ! | TGGCTTCACCCTTAATTTGA+AGG | + | chr1_1:44683531-44683550 | Msa0023440:three_prime_UTR | 40.0% |
| ! | CCCTTAATTTGAAGGCGAAA+TGG | + | chr1_1:44683539-44683558 | Msa0023440:three_prime_UTR | 40.0% |
| GCCATTTCGCCTTCAAATTA+AGG | - | chr1_1:44683543-44683562 | None:intergenic | 40.0% | |
| !! | ATAGAGCACACGCTTTGAGA+TGG | - | chr1_1:44675221-44675240 | None:intergenic | 45.0% |
| GTGGGAAATAAGTCATGGTG+AGG | - | chr1_1:44676152-44676171 | None:intergenic | 45.0% | |
| TTTCTCTACACATGCACGAC+TGG | - | chr1_1:44676330-44676349 | None:intergenic | 45.0% | |
| !! | GCTAGGACGTTTTAAGTGAG+AGG | + | chr1_1:44676424-44676443 | Msa0023440:intron | 45.0% |
| GCTAAGATCGGATCGGATTT+CGG | + | chr1_1:44676682-44676701 | Msa0023440:intron | 45.0% | |
| !! | AAATCACATGCGGTTCGGTT+CGG | - | chr1_1:44677110-44677129 | None:intergenic | 45.0% |
| GCATCACGATATCTCAGACT+GGG | - | chr1_1:44677315-44677334 | None:intergenic | 45.0% | |
| TGCATCACGATATCTCAGAC+TGG | - | chr1_1:44677316-44677335 | None:intergenic | 45.0% | |
| AACCACAGATGCTCCATCAA+AGG | + | chr1_1:44677349-44677368 | Msa0023440:intron | 45.0% | |
| ! | TTCCTTTGATGGAGCATCTG+TGG | - | chr1_1:44677354-44677373 | None:intergenic | 45.0% |
| ATGTTACGCCAGACATAGCT+CGG | + | chr1_1:44677436-44677455 | Msa0023440:intron | 45.0% | |
| GATCCAAAGAAGTCGGTATG+TGG | + | chr1_1:44677475-44677494 | Msa0023440:intron | 45.0% | |
| !! | TTCCCACATACCGACTTCTT+TGG | - | chr1_1:44677481-44677500 | None:intergenic | 45.0% |
| TGGGGGCCAAAACTGTAAAT+GGG | - | chr1_1:44677691-44677710 | None:intergenic | 45.0% | |
| ! | ACTGGTCAAAATTGGACTGG+GGG | - | chr1_1:44677708-44677727 | None:intergenic | 45.0% |
| ! | GACTGGTCAAAATTGGACTG+GGG | - | chr1_1:44677709-44677728 | None:intergenic | 45.0% |
| !! | TGCGTTGACTGGGTCAAAAT+TGG | + | chr1_1:44677944-44677963 | Msa0023440:intron | 45.0% |
| TGACTGGGTCAAAATTGGTC+TGG | + | chr1_1:44677949-44677968 | Msa0023440:intron | 45.0% | |
| TGAGATGACCAAAGGAATGC+GGG | - | chr1_1:44678780-44678799 | None:intergenic | 45.0% | |
| AATAAGTCGATCCAAACCGG+CGG | + | chr1_1:44679041-44679060 | Msa0023440:intron | 45.0% | |
| ATCACAGGTATGGTCATGCT+GGG | + | chr1_1:44679265-44679284 | Msa0023440:intron | 45.0% | |
| GTGTTAATCCTCTGCTTTCC+AGG | + | chr1_1:44679359-44679378 | Msa0023440:intron | 45.0% | |
| GTTAATCCTCTGCTTTCCAG+GGG | + | chr1_1:44679361-44679380 | Msa0023440:intron | 45.0% | |
| AACAAATCTTGGTCTCACGG+CGG | - | chr1_1:44679412-44679431 | None:intergenic | 45.0% | |
| ! | CATTGTCTGAGATCCTGCAA+AGG | - | chr1_1:44679798-44679817 | None:intergenic | 45.0% |
| CTTTGCAGGATCTCAGACAA+TGG | + | chr1_1:44679796-44679815 | Msa0023440:intron | 45.0% | |
| ATTTCAGGATCCTCTCGATC+TGG | + | chr1_1:44680126-44680145 | Msa0023440:CDS | 45.0% | |
| !! | AATAGAAGTGCCAGATCGAG+AGG | - | chr1_1:44680139-44680158 | None:intergenic | 45.0% |
| ! | CTGGCACTTCTATTTGTTGG+TGG | + | chr1_1:44680145-44680164 | Msa0023440:CDS | 45.0% |
| ! | AGCTCTTTCAGACTTGCTCA+AGG | + | chr1_1:44680360-44680379 | Msa0023440:CDS | 45.0% |
| ACCTGATTCAGGACAGCTAA+TGG | + | chr1_1:44680430-44680449 | Msa0023440:intron | 45.0% | |
| TCCATTAGCTGTCCTGAATC+AGG | - | chr1_1:44680434-44680453 | None:intergenic | 45.0% | |
| TGTCAGATCCAACACTTCCA+TGG | + | chr1_1:44680508-44680527 | Msa0023440:CDS | 45.0% | |
| ! | TGGAAATGCCATGGAAGTGT+TGG | - | chr1_1:44680519-44680538 | None:intergenic | 45.0% |
| AGCATCAGAGGATGTGAACT+TGG | + | chr1_1:44680547-44680566 | Msa0023440:CDS | 45.0% | |
| GAAGCCTGTGGAGATGATTT+AGG | + | chr1_1:44680596-44680615 | Msa0023440:CDS | 45.0% | |
| ! | ATTGGCAACGTTGCTTTCCT+TGG | + | chr1_1:44680620-44680639 | Msa0023440:CDS | 45.0% |
| TACAGGCCTATTTGACCAAG+AGG | + | chr1_1:44680795-44680814 | Msa0023440:intron | 45.0% | |
| CATGCATGAGAACTCAGCAA+TGG | - | chr1_1:44680956-44680975 | None:intergenic | 45.0% | |
| TGAGCTTATCAGCACTGTAG+AGG | + | chr1_1:44681003-44681022 | Msa0023440:CDS | 45.0% | |
| ATCAGCACTGTAGAGGAATC+TGG | + | chr1_1:44681010-44681029 | Msa0023440:CDS | 45.0% | |
| TCAGCACTGTAGAGGAATCT+GGG | + | chr1_1:44681011-44681030 | Msa0023440:CDS | 45.0% | |
| ! | GCAGAAAGTACAACAGGGAA+TGG | + | chr1_1:44681115-44681134 | Msa0023440:CDS | 45.0% |
| AACTTCTAGCCACTATTGCG+TGG | + | chr1_1:44681588-44681607 | Msa0023440:intron | 45.0% | |
| TGAAGGGCAACAGTTCTACA+AGG | - | chr1_1:44681621-44681640 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr1_1:44681727-44681746 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr1_1:44681730-44681749 | None:intergenic | 45.0% | |
| TAGTTGTCAAAGCGGAAACG+CGG | + | chr1_1:44681993-44682012 | Msa0023440:intron | 45.0% | |
| AGGCAAAAGCGGAACAAAAG+CGG | - | chr1_1:44682397-44682416 | None:intergenic | 45.0% | |
| TTGTCAATAGCGGTCTAACG+CGG | - | chr1_1:44682485-44682504 | None:intergenic | 45.0% | |
| ATACGAACAGAACACCGTTC+TGG | - | chr1_1:44682703-44682722 | None:intergenic | 45.0% | |
| GAACGGTGTTCTGTTCGTAT+CGG | + | chr1_1:44682703-44682722 | Msa0023440:intron | 45.0% | |
| GGTGTCTTACACGTGTCATA+CGG | + | chr1_1:44682779-44682798 | Msa0023440:intron | 45.0% | |
| GTGTCTTACACGTGTCATAC+GGG | + | chr1_1:44682780-44682799 | Msa0023440:intron | 45.0% | |
| TGACACCCCAACAAGATTTG+AGG | + | chr1_1:44683137-44683156 | Msa0023440:CDS | 45.0% | |
| GATAGTATCTGTTCTGGTGC+TGG | + | chr1_1:44683190-44683209 | Msa0023440:three_prime_UTR | 45.0% | |
| ! | TAGTTTCTTTCTGCTGGCTG+TGG | + | chr1_1:44683491-44683510 | Msa0023440:three_prime_UTR | 45.0% |
| ! | AGTTTCTTTCTGCTGGCTGT+GGG | + | chr1_1:44683492-44683511 | Msa0023440:three_prime_UTR | 45.0% |
| TGGGTTGTCTCTTCTCTTCA+TGG | + | chr1_1:44683511-44683530 | Msa0023440:three_prime_UTR | 45.0% | |
| !!! | TATTATTTTATTTTTTTTAG+GGG | - | chr1_1:44678387-44678406 | None:intergenic | 5.0% |
| !!! | AATTTTTTTTTTTTTTTGTA+GGG | - | chr1_1:44678428-44678447 | None:intergenic | 5.0% |
| !!! | TAATTTTTTTTTTTTTTTGT+AGG | - | chr1_1:44678429-44678448 | None:intergenic | 5.0% |
| !! | AAATTGGTGTCGCGCCACAT+TGG | + | chr1_1:44675252-44675271 | Msa0023440:intron | 50.0% |
| GCTTCCAAGCTACTCCAATG+TGG | - | chr1_1:44675269-44675288 | None:intergenic | 50.0% | |
| CCACCATGCACTACTCATGA+AGG | - | chr1_1:44675852-44675871 | None:intergenic | 50.0% | |
| CCTTCATGAGTAGTGCATGG+TGG | + | chr1_1:44675849-44675868 | Msa0023440:intron | 50.0% | |
| CCACCATGCACTACTCATGA+AGG | - | chr1_1:44675852-44675871 | None:intergenic | 50.0% | |
| CCTTCATGAGTAGTGCATGG+TGG | + | chr1_1:44675849-44675868 | Msa0023440:intron | 50.0% | |
| ! | CATGCACGACTGGTTAGTAG+TGG | - | chr1_1:44676320-44676339 | None:intergenic | 50.0% |
| ! | TTGTTTGGAGGGTGTGTTGC+GGG | - | chr1_1:44676355-44676374 | None:intergenic | 50.0% |
| ! | CTTGTTTGGAGGGTGTGTTG+CGG | - | chr1_1:44676356-44676375 | None:intergenic | 50.0% |
| !!! | TTTTGCGGTTCGGTTCGGTT+TGG | - | chr1_1:44676728-44676747 | None:intergenic | 50.0% |
| !! | TGCGGTTTGGATCGGTTTTG+AGG | - | chr1_1:44677158-44677177 | None:intergenic | 50.0% |
| GCACAAATCCGAGCTATGTC+TGG | - | chr1_1:44677447-44677466 | None:intergenic | 50.0% | |
| GCTCGGATTTGTGCCAACTT+TGG | + | chr1_1:44677453-44677472 | Msa0023440:intron | 50.0% | |
| GGGGCCAAAACTGTAAATGG+GGG | - | chr1_1:44677689-44677708 | None:intergenic | 50.0% | |
| GGGGGCCAAAACTGTAAATG+GGG | - | chr1_1:44677690-44677709 | None:intergenic | 50.0% | |
| CTGGGGGCCAAAACTGTAAA+TGG | - | chr1_1:44677692-44677711 | None:intergenic | 50.0% | |
| ! | TGCGCCATGTATGCATTGAC+TGG | - | chr1_1:44677726-44677745 | None:intergenic | 50.0% |
| ATGCATACATGGCGCACACA+TGG | + | chr1_1:44677730-44677749 | Msa0023440:intron | 50.0% | |
| ! | CTGGGTCAAAATTGGTCTGG+AGG | + | chr1_1:44677952-44677971 | Msa0023440:intron | 50.0% |
| GGAGGCCAAAACTGCAAAAG+AGG | + | chr1_1:44677970-44677989 | Msa0023440:intron | 50.0% | |
| CAGAGTTGTGTCGTGTGGTT+TGG | + | chr1_1:44678539-44678558 | Msa0023440:intron | 50.0% | |
| !! | CTTTTCTATCTCCGCCGGTT+TGG | - | chr1_1:44679055-44679074 | None:intergenic | 50.0% |
| CATCACAGGTATGGTCATGC+TGG | + | chr1_1:44679264-44679283 | Msa0023440:intron | 50.0% | |
| TCACAGGTATGGTCATGCTG+GGG | + | chr1_1:44679266-44679285 | Msa0023440:intron | 50.0% | |
| ATGCTGCTGCACTCATTGAC+AGG | - | chr1_1:44680256-44680275 | None:intergenic | 50.0% | |
| CACTCTCCATTGTCATGAGC+AGG | + | chr1_1:44680478-44680497 | Msa0023440:intron | 50.0% | |
| !! | TCAGGATTTGCTGAAGCCTG+TGG | + | chr1_1:44680584-44680603 | Msa0023440:CDS | 50.0% |
| TGCCCATAGAGCAAGATCCA+AGG | - | chr1_1:44680640-44680659 | None:intergenic | 50.0% | |
| GGCCTATTTGACCAAGAGGA+AGG | + | chr1_1:44680799-44680818 | Msa0023440:intron | 50.0% | |
| AGGAAGGAAGAGAGCCACAA+AGG | + | chr1_1:44680815-44680834 | Msa0023440:CDS | 50.0% | |
| GGAAGGAAGAGAGCCACAAA+GGG | + | chr1_1:44680816-44680835 | Msa0023440:CDS | 50.0% | |
| CAGCACTGTAGAGGAATCTG+GGG | + | chr1_1:44681012-44681031 | Msa0023440:CDS | 50.0% | |
| GGAAAGATGCCACGCAATAG+TGG | - | chr1_1:44681600-44681619 | None:intergenic | 50.0% | |
| GGCAAAAGCGGAACAAAAGC+GGG | - | chr1_1:44682396-44682415 | None:intergenic | 50.0% | |
| GAACAGAACACCGTTCTGGT+GGG | - | chr1_1:44682699-44682718 | None:intergenic | 50.0% | |
| ! | ACACGTGTCATACGGGTTGT+TGG | + | chr1_1:44682787-44682806 | Msa0023440:intron | 50.0% |
| ! | CACGTGTCATACGGGTTGTT+GGG | + | chr1_1:44682788-44682807 | Msa0023440:intron | 50.0% |
| ! | ATCGGGCCTTTGCTGTATGA+TGG | + | chr1_1:44683110-44683129 | Msa0023440:CDS | 50.0% |
| ! | TCGGGCCTTTGCTGTATGAT+GGG | + | chr1_1:44683111-44683130 | Msa0023440:CDS | 50.0% |
| TGGCGCCTCAAATCTTGTTG+GGG | - | chr1_1:44683145-44683164 | None:intergenic | 50.0% | |
| GTGGCGCCTCAAATCTTGTT+GGG | - | chr1_1:44683146-44683165 | None:intergenic | 50.0% | |
| TGTGGCGCCTCAAATCTTGT+TGG | - | chr1_1:44683147-44683166 | None:intergenic | 50.0% | |
| !! | CGGTTCGGTTCGGTTTGGTT+CGG | - | chr1_1:44676723-44676742 | None:intergenic | 55.0% |
| !! | ACATGCGGTTCGGTTCGGTT+TGG | - | chr1_1:44677105-44677124 | None:intergenic | 55.0% |
| ! | GTTTGCGGTGCGGTTTGGAT+CGG | - | chr1_1:44677166-44677185 | None:intergenic | 55.0% |
| !! | CTCAGCACTAGGGGTGTTTG+CGG | - | chr1_1:44677181-44677200 | None:intergenic | 55.0% |
| TGGTTCAACAAGGGGCTCTC+TGG | - | chr1_1:44677399-44677418 | None:intergenic | 55.0% | |
| ACATCGTGAGATCTCGACCG+AGG | + | chr1_1:44678516-44678535 | Msa0023440:intron | 55.0% | |
| CACACGACACAACTCTGCCT+CGG | - | chr1_1:44678536-44678555 | None:intergenic | 55.0% | |
| AGGAATGCGGGAACAGTGGA+GGG | - | chr1_1:44678768-44678787 | None:intergenic | 55.0% | |
| AAGGAATGCGGGAACAGTGG+AGG | - | chr1_1:44678769-44678788 | None:intergenic | 55.0% | |
| CCAAAGGAATGCGGGAACAG+TGG | - | chr1_1:44678772-44678791 | None:intergenic | 55.0% | |
| CCACTGTTCCCGCATTCCTT+TGG | + | chr1_1:44678769-44678788 | Msa0023440:CDS | 55.0% | |
| CACAGGTATGGTCATGCTGG+GGG | + | chr1_1:44679267-44679286 | Msa0023440:intron | 55.0% | |
| CTCTGCTTTCCAGGGGAAGA+GGG | + | chr1_1:44679368-44679387 | Msa0023440:intron | 55.0% | |
| GGATCTTGCTCTATGGGCAC+TGG | + | chr1_1:44680641-44680660 | Msa0023440:CDS | 55.0% | |
| GTGGCTCTCTTCCTTCCTCT+TGG | - | chr1_1:44680813-44680832 | None:intergenic | 55.0% | |
| GGCCACCCCAAAAATTGACG+CGG | + | chr1_1:44682024-44682043 | Msa0023440:intron | 55.0% | |
| ! | ACCGCGCCGCGTCAATTTTT+GGG | - | chr1_1:44682033-44682052 | None:intergenic | 55.0% |
| ! | TACCGCGCCGCGTCAATTTT+TGG | - | chr1_1:44682034-44682053 | None:intergenic | 55.0% |
| GGTCAATGCGGGCAAAAAGC+GGG | - | chr1_1:44682354-44682373 | None:intergenic | 55.0% | |
| GGGTCAATGCGGGCAAAAAG+CGG | - | chr1_1:44682355-44682374 | None:intergenic | 55.0% | |
| GGCAAAAAGCGGGTCAATGC+GGG | - | chr1_1:44682365-44682384 | None:intergenic | 55.0% | |
| GGGCAAAAAGCGGGTCAATG+CGG | - | chr1_1:44682366-44682385 | None:intergenic | 55.0% | |
| GAACAAAAGCGGGTCAACGC+GGG | - | chr1_1:44682386-44682405 | None:intergenic | 55.0% | |
| GGAACAAAAGCGGGTCAACG+CGG | - | chr1_1:44682387-44682406 | None:intergenic | 55.0% | |
| AGTCGCGCGTTAGGCAAAAG+CGG | - | chr1_1:44682408-44682427 | None:intergenic | 55.0% | |
| ! | CTTTTGCCTAACGCGCGACT+CGG | + | chr1_1:44682408-44682427 | Msa0023440:intron | 55.0% |
| ! | GTTGTCGCTTCCCACCAGAA+CGG | + | chr1_1:44682686-44682705 | Msa0023440:intron | 55.0% |
| CGAACAGAACACCGTTCTGG+TGG | - | chr1_1:44682700-44682719 | None:intergenic | 55.0% | |
| ! | GGTGTCCTTGCTTCTGAGAG+AGG | + | chr1_1:44682837-44682856 | Msa0023440:intron | 55.0% |
| GAGGACCTCTCTCAGAAGCA+AGG | - | chr1_1:44682845-44682864 | None:intergenic | 55.0% | |
| CGCGCCACATTGGAGTAGCT+TGG | + | chr1_1:44675262-44675281 | Msa0023440:intron | 60.0% | |
| !! | CACTAGGGGTGTTTGCGGTG+CGG | - | chr1_1:44677176-44677195 | None:intergenic | 60.0% |
| ! | ACGTCCACGTGTGCGTTGAC+TGG | + | chr1_1:44677933-44677952 | Msa0023440:intron | 60.0% |
| !! | CGTCCACGTGTGCGTTGACT+GGG | + | chr1_1:44677934-44677953 | Msa0023440:intron | 60.0% |
| TGACCCAGTCAACGCACACG+TGG | - | chr1_1:44677940-44677959 | None:intergenic | 60.0% | |
| CGAGGCAGAGTTGTGTCGTG+TGG | + | chr1_1:44678534-44678553 | Msa0023440:intron | 60.0% | |
| CCTCTTCCCCTGGAAAGCAG+AGG | - | chr1_1:44679370-44679389 | None:intergenic | 60.0% | |
| CCTCTGCTTTCCAGGGGAAG+AGG | + | chr1_1:44679367-44679386 | Msa0023440:intron | 60.0% | |
| GGCGGAACTCTGGACTACCA+GGG | - | chr1_1:44679394-44679413 | None:intergenic | 60.0% | |
| TTGGTCTCACGGCGGAACTC+TGG | - | chr1_1:44679404-44679423 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | - | chr1_1:44681682-44681701 | None:intergenic | 60.0% | |
| ACTGAAGCTCCCGCATACGC+AGG | + | chr1_1:44681686-44681705 | Msa0023440:intron | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | + | chr1_1:44681687-44681706 | Msa0023440:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr1_1:44681714-44681733 | None:intergenic | 60.0% |
| !! | CGCCGCGTCAATTTTTGGGG+TGG | - | chr1_1:44682029-44682048 | None:intergenic | 60.0% |
| ! | CCGCGCCGCGTCAATTTTTG+GGG | - | chr1_1:44682032-44682051 | None:intergenic | 60.0% |
| CCCCAAAAATTGACGCGGCG+CGG | + | chr1_1:44682029-44682048 | Msa0023440:intron | 60.0% | |
| AATTGACGCGGCGCGGTAAG+CGG | + | chr1_1:44682036-44682055 | Msa0023440:intron | 60.0% | |
| GGTCAACGCGGGCAAAAAGC+GGG | - | chr1_1:44682375-44682394 | None:intergenic | 60.0% | |
| GGGTCAACGCGGGCAAAAAG+CGG | - | chr1_1:44682376-44682395 | None:intergenic | 60.0% | |
| ! | GGGGTGTTTGCGGTGCGGTT+TGG | - | chr1_1:44677171-44677190 | None:intergenic | 65.0% |
| TTTCCAGGGGAAGAGGGCCC+TGG | + | chr1_1:44679374-44679393 | Msa0023440:intron | 65.0% | |
| CGGCGGAACTCTGGACTACC+AGG | - | chr1_1:44679395-44679414 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | - | chr1_1:44681681-44681700 | None:intergenic | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr1_1:44681698-44681717 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr1_1:44681699-44681718 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr1_1:44681698-44681717 | Msa0023440:intron | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr1_1:44681699-44681718 | Msa0023440:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr1_1:44681712-44681731 | Msa0023440:intron | 65.0% | |
| GTCAAAGCGGAAACGCGGCG+CGG | + | chr1_1:44681998-44682017 | Msa0023440:intron | 65.0% | |
| ATTGACGCGGCGCGGTAAGC+GGG | + | chr1_1:44682037-44682056 | Msa0023440:intron | 65.0% | |
| !!! | GACCCGCTTTTTGCCCGCGT+TGG | + | chr1_1:44682328-44682347 | Msa0023440:intron | 65.0% |
| GGCCAACGCGGGCAAAAAGC+GGG | - | chr1_1:44682333-44682352 | None:intergenic | 65.0% | |
| GGGCCAACGCGGGCAAAAAG+CGG | - | chr1_1:44682334-44682353 | None:intergenic | 65.0% | |
| GGCAAAAAGCGGGCCAACGC+GGG | - | chr1_1:44682344-44682363 | None:intergenic | 65.0% | |
| GGGCAAAAAGCGGGCCAACG+CGG | - | chr1_1:44682345-44682364 | None:intergenic | 65.0% | |
| CTACCAGGGCCCTCTTCCCC+TGG | - | chr1_1:44679380-44679399 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr1_1:44681692-44681711 | Msa0023440:intron | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr1_1:44681693-44681712 | Msa0023440:intron | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr1_1:44681697-44681716 | Msa0023440:intron | 70.0% | |
| ACGCGACCGAGTCGCGCGTT+AGG | - | chr1_1:44682417-44682436 | None:intergenic | 70.0% | |
| CGGTCGCGTTCTGACGCGCT+AGG | + | chr1_1:44682428-44682447 | Msa0023440:intron | 70.0% | |
| GGTCTAACGCGGCGCGATCG+CGG | - | chr1_1:44682474-44682493 | None:intergenic | 70.0% | |
| ! | AGCGGAAACGCGGCGCGGCG+CGG | + | chr1_1:44682003-44682022 | Msa0023440:intron | 80.0% |
| ! | CGCGGTAAGCGGGCGCGACG+CGG | + | chr1_1:44682047-44682066 | Msa0023440:intron | 80.0% |
| ! | AACGCGGCGCGATCGCGGCG+CGG | - | chr1_1:44682469-44682488 | None:intergenic | 80.0% |
| ! | GGCGCGATCGCGGCGCGGAG+CGG | - | chr1_1:44682464-44682483 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 44674980 | 44683563 | 44674980 | ID=Msa0023440;Name=Msa0023440 |
| chr1_1 | mRNA | 44674980 | 44683563 | 44674980 | ID=Msa0023440-mRNA-1;Parent=Msa0023440;Name=Msa0023440-mRNA-1;_AED=0.17;_eAED=0.17;_QI=19|0.87|0.88|0.88|0.87|0.88|9|390|318 |
| chr1_1 | exon | 44674980 | 44674986 | 44674980 | ID=Msa0023440-mRNA-1:exon:12830;Parent=Msa0023440-mRNA-1 |
| chr1_1 | exon | 44678684 | 44678808 | 44678684 | ID=Msa0023440-mRNA-1:exon:12831;Parent=Msa0023440-mRNA-1 |
| chr1_1 | exon | 44679804 | 44679906 | 44679804 | ID=Msa0023440-mRNA-1:exon:12832;Parent=Msa0023440-mRNA-1 |
| chr1_1 | exon | 44680112 | 44680171 | 44680112 | ID=Msa0023440-mRNA-1:exon:12833;Parent=Msa0023440-mRNA-1 |
| chr1_1 | exon | 44680319 | 44680381 | 44680319 | ID=Msa0023440-mRNA-1:exon:12834;Parent=Msa0023440-mRNA-1 |
| chr1_1 | exon | 44680500 | 44680700 | 44680500 | ID=Msa0023440-mRNA-1:exon:12835;Parent=Msa0023440-mRNA-1 |
| chr1_1 | exon | 44680800 | 44680908 | 44680800 | ID=Msa0023440-mRNA-1:exon:12836;Parent=Msa0023440-mRNA-1 |
| chr1_1 | exon | 44680990 | 44681207 | 44680990 | ID=Msa0023440-mRNA-1:exon:12837;Parent=Msa0023440-mRNA-1 |
| chr1_1 | exon | 44683084 | 44683563 | 44683084 | ID=Msa0023440-mRNA-1:exon:12838;Parent=Msa0023440-mRNA-1 |
| chr1_1 | five_prime_UTR | 44674980 | 44674986 | 44674980 | ID=Msa0023440-mRNA-1:five_prime_utr;Parent=Msa0023440-mRNA-1 |
| chr1_1 | five_prime_UTR | 44678684 | 44678695 | 44678684 | ID=Msa0023440-mRNA-1:five_prime_utr;Parent=Msa0023440-mRNA-1 |
| chr1_1 | CDS | 44678696 | 44678808 | 44678696 | ID=Msa0023440-mRNA-1:cds;Parent=Msa0023440-mRNA-1 |
| chr1_1 | CDS | 44679804 | 44679906 | 44679804 | ID=Msa0023440-mRNA-1:cds;Parent=Msa0023440-mRNA-1 |
| chr1_1 | CDS | 44680112 | 44680171 | 44680112 | ID=Msa0023440-mRNA-1:cds;Parent=Msa0023440-mRNA-1 |
| chr1_1 | CDS | 44680319 | 44680381 | 44680319 | ID=Msa0023440-mRNA-1:cds;Parent=Msa0023440-mRNA-1 |
| chr1_1 | CDS | 44680500 | 44680700 | 44680500 | ID=Msa0023440-mRNA-1:cds;Parent=Msa0023440-mRNA-1 |
| chr1_1 | CDS | 44680800 | 44680908 | 44680800 | ID=Msa0023440-mRNA-1:cds;Parent=Msa0023440-mRNA-1 |
| chr1_1 | CDS | 44680990 | 44681207 | 44680990 | ID=Msa0023440-mRNA-1:cds;Parent=Msa0023440-mRNA-1 |
| chr1_1 | CDS | 44683084 | 44683173 | 44683084 | ID=Msa0023440-mRNA-1:cds;Parent=Msa0023440-mRNA-1 |
| chr1_1 | three_prime_UTR | 44683174 | 44683563 | 44683174 | ID=Msa0023440-mRNA-1:three_prime_utr;Parent=Msa0023440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
