Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270660 | XP_003593045.1 | 97.959 | 147 | 3 | 0 | 1 | 147 | 1 | 147 | 4.18e-97 | 286 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270660 | A2Q3U1 | 97.959 | 147 | 3 | 0 | 1 | 147 | 1 | 147 | 2.00e-97 | 286 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004540 | Msa0270660 | 0.802407 | 5.692175e-49 | -8.615850e-47 |
| Msa0016670 | Msa0270660 | 0.819373 | 1.201702e-52 | -8.615850e-47 |
| Msa0023440 | Msa0270660 | 0.800880 | 1.171120e-48 | -8.615850e-47 |
| Msa0027260 | Msa0270660 | 0.806705 | 7.225449e-50 | -8.615850e-47 |
| Msa0032370 | Msa0270660 | 0.804580 | 2.017625e-49 | -8.615850e-47 |
| Msa0048180 | Msa0270660 | 0.807578 | 4.721214e-50 | -8.615850e-47 |
| Msa0052610 | Msa0270660 | 0.848586 | 5.578822e-60 | -8.615850e-47 |
| Msa0052690 | Msa0270660 | 0.822674 | 2.087234e-53 | -8.615850e-47 |
| Msa0057610 | Msa0270660 | 0.818957 | 1.494603e-52 | -8.615850e-47 |
| Msa0057710 | Msa0270660 | 0.827560 | 1.462501e-54 | -8.615850e-47 |
| Msa0067870 | Msa0270660 | 0.828336 | 9.513217e-55 | -8.615850e-47 |
| Msa0073670 | Msa0270660 | 0.816281 | 5.994628e-52 | -8.615850e-47 |
| Msa0074320 | Msa0270660 | 0.808459 | 3.065684e-50 | -8.615850e-47 |
| Msa0076040 | Msa0270660 | 0.807930 | 3.973429e-50 | -8.615850e-47 |
| Msa0077680 | Msa0270660 | 0.825375 | 4.851151e-54 | -8.615850e-47 |
| Msa0097850 | Msa0270660 | 0.853775 | 1.911504e-61 | -8.615850e-47 |
| Msa0103240 | Msa0270660 | 0.805207 | 1.491989e-49 | -8.615850e-47 |
| Msa0107250 | Msa0270660 | 0.801278 | 9.711387e-49 | -8.615850e-47 |
| Msa0107280 | Msa0270660 | 0.808308 | 3.300942e-50 | -8.615850e-47 |
| Msa0116770 | Msa0270660 | 0.800442 | 1.438798e-48 | -8.615850e-47 |
| Msa0128860 | Msa0270660 | 0.822512 | 2.276943e-53 | -8.615850e-47 |
| Msa0167480 | Msa0270660 | 0.828734 | 7.625095e-55 | -8.615850e-47 |
| Msa0174730 | Msa0270660 | 0.820182 | 7.850231e-53 | -8.615850e-47 |
| Msa0181610 | Msa0270660 | 0.807383 | 5.191058e-50 | -8.615850e-47 |
| Msa0186890 | Msa0270660 | 0.818281 | 2.127805e-52 | -8.615850e-47 |
| Msa0187690 | Msa0270660 | 0.805698 | 1.177194e-49 | -8.615850e-47 |
| Msa0187930 | Msa0270660 | 0.821487 | 3.933044e-53 | -8.615850e-47 |
| Msa0188350 | Msa0270660 | 0.826632 | 2.439223e-54 | -8.615850e-47 |
| Msa0188890 | Msa0270660 | 0.992383 | 5.837561e-193 | -8.615850e-47 |
| Msa0194540 | Msa0270660 | 0.821834 | 3.269492e-53 | -8.615850e-47 |
| Msa0199880 | Msa0270660 | 0.809286 | 2.040157e-50 | -8.615850e-47 |
| Msa0226330 | Msa0270660 | 0.819848 | 9.363867e-53 | -8.615850e-47 |
| Msa0226460 | Msa0270660 | 0.825010 | 5.918882e-54 | -8.615850e-47 |
| Msa0231100 | Msa0270660 | 0.834298 | 3.249246e-56 | -8.615850e-47 |
| Msa0231380 | Msa0270660 | 0.998942 | 7.822843e-283 | -8.615850e-47 |
| Msa0233730 | Msa0270660 | 0.803350 | 3.636258e-49 | -8.615850e-47 |
| Msa0236270 | Msa0270660 | 0.802880 | 4.547840e-49 | -8.615850e-47 |
| Msa0241800 | Msa0270660 | 0.816997 | 4.143542e-52 | -8.615850e-47 |
| Msa0242680 | Msa0270660 | 0.819037 | 1.432838e-52 | -8.615850e-47 |
| Msa0244780 | Msa0270660 | 0.815475 | 9.069796e-52 | -8.615850e-47 |
| Msa0249580 | Msa0270660 | 0.800128 | 1.666887e-48 | -8.615850e-47 |
| Msa0254940 | Msa0270660 | 0.822206 | 2.681292e-53 | -8.615850e-47 |
| Msa0268130 | Msa0270660 | 0.810940 | 8.978603e-51 | -8.615850e-47 |
| Msa0270660 | Msa0277450 | 0.836967 | 6.858541e-57 | -8.615850e-47 |
| Msa0270660 | Msa0280430 | 0.801379 | 9.259773e-49 | -8.615850e-47 |
| Msa0270660 | Msa0296250 | 0.816745 | 4.719404e-52 | -8.615850e-47 |
| Msa0270660 | Msa0298990 | 0.808402 | 3.152682e-50 | -8.615850e-47 |
| Msa0270660 | Msa0304590 | 0.817189 | 3.752581e-52 | -8.615850e-47 |
| Msa0270660 | Msa0304660 | 0.812845 | 3.454200e-51 | -8.615850e-47 |
| Msa0270660 | Msa0317160 | 0.804304 | 2.303243e-49 | -8.615850e-47 |
| Msa0270660 | Msa0331700 | 0.813132 | 2.988125e-51 | -8.615850e-47 |
| Msa0270660 | Msa0337650 | 0.806521 | 7.899229e-50 | -8.615850e-47 |
| Msa0270660 | Msa0339640 | 0.801677 | 8.044009e-49 | -8.615850e-47 |
| Msa0270660 | Msa0365100 | 0.810184 | 1.307683e-50 | -8.615850e-47 |
| Msa0270660 | Msa0376040 | 0.812323 | 4.491300e-51 | -8.615850e-47 |
| Msa0270660 | Msa0392940 | 0.815432 | 9.274801e-52 | -8.615850e-47 |
| Msa0270660 | Msa0402820 | 0.812891 | 3.374012e-51 | -8.615850e-47 |
| Msa0270660 | Msa0416400 | 0.803061 | 4.171774e-49 | -8.615850e-47 |
| Msa0270660 | Msa0423750 | 0.801836 | 7.461803e-49 | -8.615850e-47 |
| Msa0270660 | Msa0427120 | 0.802450 | 5.579346e-49 | -8.615850e-47 |
| Msa0270660 | Msa0428240 | 0.809395 | 1.932986e-50 | -8.615850e-47 |
| Msa0270660 | Msa0429950 | 0.804400 | 2.199876e-49 | -8.615850e-47 |
| Msa0270660 | Msa0431770 | 0.808843 | 2.538014e-50 | -8.615850e-47 |
| Msa0270660 | Msa0479200 | 0.800147 | 1.651914e-48 | -8.615850e-47 |
| Msa0270660 | Msa0508590 | 0.836210 | 1.069318e-56 | -8.615850e-47 |
| Msa0270660 | Msa0508630 | 0.817107 | 3.915025e-52 | -8.615850e-47 |
| Msa0270660 | Msa0516040 | 0.813886 | 2.039394e-51 | -8.615850e-47 |
| Msa0270660 | Msa0517840 | 0.813308 | 2.733330e-51 | -8.615850e-47 |
| Msa0270660 | Msa0519130 | 0.806454 | 8.162814e-50 | -8.615850e-47 |
| Msa0270660 | Msa0526540 | 0.845491 | 3.928882e-59 | -8.615850e-47 |
| Msa0270660 | Msa0527150 | 0.822521 | 2.265358e-53 | -8.615850e-47 |
| Msa0270660 | Msa0541860 | 0.816577 | 5.147811e-52 | -8.615850e-47 |
| Msa0270660 | Msa0555910 | 0.804435 | 2.162945e-49 | -8.615850e-47 |
| Msa0270660 | Msa0561430 | 0.801317 | 9.534146e-49 | -8.615850e-47 |
| Msa0270660 | Msa0571920 | 0.813836 | 2.092199e-51 | -8.615850e-47 |
| Msa0270660 | Msa0576940 | 0.837657 | 4.566739e-57 | -8.615850e-47 |
| Msa0270660 | Msa0581070 | 0.810237 | 1.273547e-50 | -8.615850e-47 |
| Msa0270660 | Msa0616240 | 0.807355 | 5.264369e-50 | -8.615850e-47 |
| Msa0270660 | Msa0620990 | 0.812249 | 4.662041e-51 | -8.615850e-47 |
| Msa0270660 | Msa0638480 | 0.810789 | 9.677230e-51 | -8.615850e-47 |
| Msa0270660 | Msa0654870 | 0.806083 | 9.772908e-50 | -8.615850e-47 |
| Msa0270660 | Msa0661710 | 0.809182 | 2.146937e-50 | -8.615850e-47 |
| Msa0270660 | Msa0666230 | 0.812022 | 5.224393e-51 | -8.615850e-47 |
| Msa0270660 | Msa0679700 | 0.811303 | 7.490703e-51 | -8.615850e-47 |
| Msa0270660 | Msa0690250 | 0.805433 | 1.338118e-49 | -8.615850e-47 |
| Msa0270660 | Msa0692080 | 0.814266 | 1.681487e-51 | -8.615850e-47 |
| Msa0270660 | Msa0699570 | 0.805838 | 1.100051e-49 | -8.615850e-47 |
| Msa0270660 | Msa0703230 | 0.818032 | 2.422229e-52 | -8.615850e-47 |
| Msa0270660 | Msa0725000 | 0.800164 | 1.638329e-48 | -8.615850e-47 |
| Msa0270660 | Msa0738040 | 0.802686 | 4.985980e-49 | -8.615850e-47 |
| Msa0270660 | Msa0765270 | 0.804217 | 2.401238e-49 | -8.615850e-47 |
| Msa0270660 | Msa0784380 | 0.819433 | 1.164326e-52 | -8.615850e-47 |
| Msa0270660 | Msa0788770 | 0.812940 | 3.291307e-51 | -8.615850e-47 |
| Msa0270660 | Msa0789650 | 0.801630 | 8.225738e-49 | -8.615850e-47 |
| Msa0270660 | Msa0790610 | 0.998247 | 8.139473e-260 | -8.615850e-47 |
| Msa0270660 | Msa0808800 | 0.805459 | 1.321260e-49 | -8.615850e-47 |
| Msa0270660 | Msa0818170 | 0.823869 | 1.097782e-53 | -8.615850e-47 |
| Msa0270660 | Msa0845110 | 0.802020 | 6.840146e-49 | -8.615850e-47 |
| Msa0270660 | Msa0895790 | 0.808029 | 3.786275e-50 | -8.615850e-47 |
| Msa0270660 | Msa0927990 | 0.813134 | 2.984888e-51 | -8.615850e-47 |
| Msa0270660 | Msa0960830 | 0.832373 | 9.812314e-56 | -8.615850e-47 |
| Msa0270660 | Msa1000930 | 0.824358 | 8.428393e-54 | -8.615850e-47 |
| Msa0270660 | Msa1004420 | 0.802920 | 4.462091e-49 | -8.615850e-47 |
| Msa0270660 | Msa1019240 | 0.810491 | 1.122801e-50 | -8.615850e-47 |
| Msa0270660 | Msa1019260 | 0.806360 | 8.544294e-50 | -8.615850e-47 |
| Msa0270660 | Msa1055010 | 0.812980 | 3.226755e-51 | -8.615850e-47 |
| Msa0270660 | Msa1066490 | 0.840022 | 1.116595e-57 | -8.615850e-47 |
| Msa0270660 | Msa1079230 | 0.822258 | 2.608328e-53 | -8.615850e-47 |
| Msa0270660 | Msa1082700 | 0.801340 | 9.431825e-49 | -8.615850e-47 |
| Msa0270660 | Msa1094420 | 0.810883 | 9.237410e-51 | -8.615850e-47 |
| Msa0270660 | Msa1104210 | 0.813951 | 1.973974e-51 | -8.615850e-47 |
| Msa0270660 | Msa1117550 | 0.802224 | 6.209613e-49 | -8.615850e-47 |
| Msa0270660 | Msa1124110 | 0.809885 | 1.516768e-50 | -8.615850e-47 |
| Msa0270660 | Msa1126510 | 0.807138 | 5.851123e-50 | -8.615850e-47 |
| Msa0270660 | Msa1131170 | 0.818758 | 1.658578e-52 | -8.615850e-47 |
| Msa0270660 | Msa1131560 | 0.806484 | 8.042394e-50 | -8.615850e-47 |
| Msa0270660 | Msa1134110 | 0.842078 | 3.220739e-58 | -8.615850e-47 |
| Msa0270660 | Msa1155520 | 0.821652 | 3.602475e-53 | -8.615850e-47 |
| Msa0270660 | Msa1166870 | 0.813749 | 2.186741e-51 | -8.615850e-47 |
| Msa0270660 | Msa1168950 | 0.821016 | 5.051171e-53 | -8.615850e-47 |
| Msa0270660 | Msa1169040 | 0.821456 | 3.999498e-53 | -8.615850e-47 |
| Msa0270660 | Msa1173300 | 0.819279 | 1.262591e-52 | -8.615850e-47 |
| Msa0270660 | Msa1181850 | 0.815872 | 7.397825e-52 | -8.615850e-47 |
| Msa0270660 | Msa1181860 | 0.816492 | 5.377936e-52 | -8.615850e-47 |
| Msa0270660 | Msa1183660 | 0.805481 | 1.307672e-49 | -8.615850e-47 |
| Msa0270660 | Msa1202580 | 0.816785 | 4.624615e-52 | -8.615850e-47 |
| Msa0270660 | Msa1227690 | 0.806379 | 8.466306e-50 | -8.615850e-47 |
| Msa0270660 | Msa1230580 | 0.814650 | 1.382840e-51 | -8.615850e-47 |
| Msa0270660 | Msa1253810 | 0.802307 | 5.970270e-49 | -8.615850e-47 |
| Msa0270660 | Msa1254730 | 0.800616 | 1.325941e-48 | -8.615850e-47 |
| Msa0270660 | Msa1256470 | 0.806880 | 6.635468e-50 | -8.615850e-47 |
| Msa0270660 | Msa1295110 | 0.819078 | 1.402572e-52 | -8.615850e-47 |
| Msa0270660 | Msa1307600 | 0.811280 | 7.575628e-51 | -8.615850e-47 |
| Msa0270660 | Msa1359270 | 0.816313 | 5.897935e-52 | -8.615850e-47 |
| Msa0270660 | Msa1363330 | 0.844161 | 8.972510e-59 | -8.615850e-47 |
| Msa0270660 | Msa1379760 | 0.823734 | 1.180931e-53 | -8.615850e-47 |
| Msa0270660 | Msa1385890 | 0.804995 | 1.652724e-49 | -8.615850e-47 |
| Msa0270660 | Msa1386600 | 0.843735 | 1.166805e-58 | -8.615850e-47 |
| Msa0270660 | Msa1386710 | 0.834022 | 3.810138e-56 | -8.615850e-47 |
| Msa0270660 | Msa1406040 | 0.805225 | 1.479179e-49 | -8.615850e-47 |
| Msa0270660 | Msa1423350 | 0.801748 | 7.776944e-49 | -8.615850e-47 |
| Msa0270660 | Msa1442850 | 0.806756 | 7.047523e-50 | -8.615850e-47 |
| Msa0270660 | Msa1448510 | 0.803330 | 3.671160e-49 | -8.615850e-47 |
| Msa0270660 | Msa1448690 | 0.802554 | 5.310059e-49 | -8.615850e-47 |
| Msa0270660 | Msa1450280 | 0.825932 | 3.579643e-54 | -8.615850e-47 |
| Msa0270660 | Msa1460320 | -0.800249 | 1.574831e-48 | -8.615850e-47 |
| Msa0270660 | Msa1461490 | 0.814723 | 1.332465e-51 | -8.615850e-47 |
| Msa0270660 | Msa1465680 | 0.800915 | 1.151653e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270660 | MtrunA17_Chr2g0277971 | 97.959 | 147 | 3 | 0 | 1 | 147 | 1 | 147 | 3.84e-101 | 286 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270660 | AT1G60870.1 | 59.184 | 147 | 60 | 0 | 1 | 147 | 1 | 147 | 1.64e-33 | 115 |
Find 26 sgRNAs with CRISPR-Local
Find 25 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTGAGAAAGCAAGAAATA+TGG | 0.282094 | 2_3:-1900376 | Msa0270660:CDS |
| GCTTGGAAAGGAATTTCTTC+TGG | 0.317736 | 2_3:-1900267 | Msa0270660:CDS |
| AGCAGCTGCCCATGCTTTGT+AGG | 0.349595 | 2_3:+1900560 | None:intergenic |
| AAGAAATATGGGAAACTTGA+TGG | 0.389367 | 2_3:-1900364 | Msa0270660:CDS |
| GTGCCATGGATGAATTTAGA+AGG | 0.394252 | 2_3:-1900455 | Msa0270660:CDS |
| GGAATATCTCGACTCGGCTA+TGG | 0.422650 | 2_3:-1900481 | Msa0270660:CDS |
| GAGGATTTCAAGAGATGAAG+TGG | 0.462068 | 2_3:-1900415 | Msa0270660:CDS |
| GCTGAGAAAGCAAGAAATAT+GGG | 0.463308 | 2_3:-1900375 | Msa0270660:CDS |
| ATAAGATCTTCGATCGTCGA+TGG | 0.506443 | 2_3:+1900603 | None:intergenic |
| GAAAGGAATTTCTTCTGGCA+AGG | 0.513277 | 2_3:-1900262 | Msa0270660:CDS |
| AGATAGAATCCTACAAAGCA+TGG | 0.513381 | 2_3:-1900569 | Msa0270660:CDS |
| AAAGGAAGGTGAACTGAGAA+AGG | 0.516993 | 2_3:+1900658 | None:intergenic |
| CTGCTTCTATGAAATCTGCT+TGG | 0.529588 | 2_3:-1900284 | Msa0270660:CDS |
| GGTTTGAAGAAGAACTTGAG+AGG | 0.547329 | 2_3:-1900434 | Msa0270660:CDS |
| AAACCTTCTAAATTCATCCA+TGG | 0.552800 | 2_3:+1900452 | None:intergenic |
| TAAAGATTGATCTGAAAGGA+AGG | 0.570141 | 2_3:+1900644 | None:intergenic |
| AAAGTATATATGTATCAAGA+TGG | 0.576287 | 2_3:+1900234 | None:intergenic |
| CTCGGCTATGGAAAGTGCCA+TGG | 0.577831 | 2_3:-1900469 | Msa0270660:CDS |
| TCTATGAAATCTGCTTGGAA+AGG | 0.578134 | 2_3:-1900279 | Msa0270660:CDS |
| CATGTAAAGATTGATCTGAA+AGG | 0.594535 | 2_3:+1900640 | None:intergenic |
| AGCCGAGTCGAGATATTCCT+CGG | 0.604035 | 2_3:+1900485 | None:intergenic |
| TGAACTTGAGCAAGAAAGAG+AGG | 0.624850 | 2_3:-1900538 | Msa0270660:CDS |
| AGCCGAGGAATATCTCGACT+CGG | 0.631008 | 2_3:-1900487 | Msa0270660:CDS |
| GATAGAATCCTACAAAGCAT+GGG | 0.638623 | 2_3:-1900568 | Msa0270660:CDS |
| AGATGCAATGCAAGAAGCCG+AGG | 0.640190 | 2_3:-1900502 | Msa0270660:CDS |
| ACTTGAGCAAGAAAGAGAGG+TGG | 0.641638 | 2_3:-1900535 | Msa0270660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TAAAGATTGATCTGAAAGGA+AGG | + | chr2_3:1900276-1900295 | None:intergenic | 30.0% | |
| CATGTAAAGATTGATCTGAA+AGG | + | chr2_3:1900280-1900299 | None:intergenic | 30.0% | |
| AAACCTTCTAAATTCATCCA+TGG | + | chr2_3:1900468-1900487 | None:intergenic | 30.0% | |
| AAGAAATATGGGAAACTTGA+TGG | - | chr2_3:1900553-1900572 | Msa0270660:CDS | 30.0% | |
| AGATAGAATCCTACAAAGCA+TGG | - | chr2_3:1900348-1900367 | Msa0270660:CDS | 35.0% | |
| GATAGAATCCTACAAAGCAT+GGG | - | chr2_3:1900349-1900368 | Msa0270660:CDS | 35.0% | |
| AGCTGAGAAAGCAAGAAATA+TGG | - | chr2_3:1900541-1900560 | Msa0270660:CDS | 35.0% | |
| GCTGAGAAAGCAAGAAATAT+GGG | - | chr2_3:1900542-1900561 | Msa0270660:CDS | 35.0% | |
| TCTATGAAATCTGCTTGGAA+AGG | - | chr2_3:1900638-1900657 | Msa0270660:CDS | 35.0% | |
| AAAGGAAGGTGAACTGAGAA+AGG | + | chr2_3:1900262-1900281 | None:intergenic | 40.0% | |
| ATAAGATCTTCGATCGTCGA+TGG | + | chr2_3:1900317-1900336 | None:intergenic | 40.0% | |
| TGAACTTGAGCAAGAAAGAG+AGG | - | chr2_3:1900379-1900398 | Msa0270660:CDS | 40.0% | |
| GTGCCATGGATGAATTTAGA+AGG | - | chr2_3:1900462-1900481 | Msa0270660:CDS | 40.0% | |
| GGTTTGAAGAAGAACTTGAG+AGG | - | chr2_3:1900483-1900502 | Msa0270660:CDS | 40.0% | |
| GAGGATTTCAAGAGATGAAG+TGG | - | chr2_3:1900502-1900521 | Msa0270660:CDS | 40.0% | |
| CTGCTTCTATGAAATCTGCT+TGG | - | chr2_3:1900633-1900652 | Msa0270660:CDS | 40.0% | |
| GCTTGGAAAGGAATTTCTTC+TGG | - | chr2_3:1900650-1900669 | Msa0270660:CDS | 40.0% | |
| GAAAGGAATTTCTTCTGGCA+AGG | - | chr2_3:1900655-1900674 | Msa0270660:CDS | 40.0% | |
| ACTTGAGCAAGAAAGAGAGG+TGG | - | chr2_3:1900382-1900401 | Msa0270660:CDS | 45.0% | |
| AGATGCAATGCAAGAAGCCG+AGG | - | chr2_3:1900415-1900434 | Msa0270660:CDS | 50.0% | |
| AGCCGAGGAATATCTCGACT+CGG | - | chr2_3:1900430-1900449 | Msa0270660:CDS | 50.0% | |
| AGCCGAGTCGAGATATTCCT+CGG | + | chr2_3:1900435-1900454 | None:intergenic | 50.0% | |
| !! | GGAATATCTCGACTCGGCTA+TGG | - | chr2_3:1900436-1900455 | Msa0270660:CDS | 50.0% |
| AGCAGCTGCCCATGCTTTGT+AGG | + | chr2_3:1900360-1900379 | None:intergenic | 55.0% | |
| !! | CTCGGCTATGGAAAGTGCCA+TGG | - | chr2_3:1900448-1900467 | Msa0270660:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 1900248 | 1900691 | 1900248 | ID=Msa0270660;Name=Msa0270660 |
| chr2_3 | mRNA | 1900248 | 1900691 | 1900248 | ID=Msa0270660-mRNA-1;Parent=Msa0270660;Name=Msa0270660-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|147 |
| chr2_3 | exon | 1900248 | 1900691 | 1900248 | ID=Msa0270660-mRNA-1:exon:986;Parent=Msa0270660-mRNA-1 |
| chr2_3 | CDS | 1900248 | 1900691 | 1900248 | ID=Msa0270660-mRNA-1:cds;Parent=Msa0270660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
