Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231380 | XP_003593045.1 | 97.959 | 147 | 3 | 0 | 1 | 147 | 1 | 147 | 4.18e-97 | 286 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231380 | A2Q3U1 | 97.959 | 147 | 3 | 0 | 1 | 147 | 1 | 147 | 2.00e-97 | 286 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004540 | Msa0231380 | 0.803778 | 2.963821e-49 | -8.615850e-47 |
| Msa0016670 | Msa0231380 | 0.819445 | 1.156873e-52 | -8.615850e-47 |
| Msa0023440 | Msa0231380 | 0.801892 | 7.264471e-49 | -8.615850e-47 |
| Msa0027260 | Msa0231380 | 0.808711 | 2.707836e-50 | -8.615850e-47 |
| Msa0032370 | Msa0231380 | 0.802836 | 4.644152e-49 | -8.615850e-47 |
| Msa0048180 | Msa0231380 | 0.809287 | 2.038968e-50 | -8.615850e-47 |
| Msa0052610 | Msa0231380 | 0.850427 | 1.710282e-60 | -8.615850e-47 |
| Msa0052690 | Msa0231380 | 0.823527 | 1.320256e-53 | -8.615850e-47 |
| Msa0057610 | Msa0231380 | 0.820677 | 6.044056e-53 | -8.615850e-47 |
| Msa0057710 | Msa0231380 | 0.828919 | 6.878543e-55 | -8.615850e-47 |
| Msa0067870 | Msa0231380 | 0.829860 | 4.063513e-55 | -8.615850e-47 |
| Msa0073670 | Msa0231380 | 0.816403 | 5.631238e-52 | -8.615850e-47 |
| Msa0074320 | Msa0231380 | 0.808323 | 3.277513e-50 | -8.615850e-47 |
| Msa0076040 | Msa0231380 | 0.807779 | 4.278597e-50 | -8.615850e-47 |
| Msa0077680 | Msa0231380 | 0.826235 | 3.031769e-54 | -8.615850e-47 |
| Msa0097850 | Msa0231380 | 0.856122 | 3.983059e-62 | -8.615850e-47 |
| Msa0103240 | Msa0231380 | 0.807474 | 4.965591e-50 | -8.615850e-47 |
| Msa0107250 | Msa0231380 | 0.800130 | 1.664824e-48 | -8.615850e-47 |
| Msa0107280 | Msa0231380 | 0.807439 | 5.051751e-50 | -8.615850e-47 |
| Msa0116770 | Msa0231380 | 0.801858 | 7.382243e-49 | -8.615850e-47 |
| Msa0128860 | Msa0231380 | 0.823527 | 1.320256e-53 | -8.615850e-47 |
| Msa0167480 | Msa0231380 | 0.829633 | 4.614609e-55 | -8.615850e-47 |
| Msa0174730 | Msa0231380 | 0.821173 | 4.646582e-53 | -8.615850e-47 |
| Msa0181610 | Msa0231380 | 0.807274 | 5.476244e-50 | -8.615850e-47 |
| Msa0186890 | Msa0231380 | 0.817207 | 3.717349e-52 | -8.615850e-47 |
| Msa0187690 | Msa0231380 | 0.806371 | 8.496047e-50 | -8.615850e-47 |
| Msa0187930 | Msa0231380 | 0.822700 | 2.058498e-53 | -8.615850e-47 |
| Msa0188350 | Msa0231380 | 0.828465 | 8.854311e-55 | -8.615850e-47 |
| Msa0188890 | Msa0231380 | 0.992408 | 4.128102e-193 | -8.615850e-47 |
| Msa0194540 | Msa0231380 | 0.822734 | 2.021842e-53 | -8.615850e-47 |
| Msa0199690 | Msa0231380 | 0.800971 | 1.122085e-48 | -8.615850e-47 |
| Msa0199880 | Msa0231380 | 0.811289 | 7.542246e-51 | -8.615850e-47 |
| Msa0226330 | Msa0231380 | 0.821128 | 4.760332e-53 | -8.615850e-47 |
| Msa0226460 | Msa0231380 | 0.825953 | 3.538551e-54 | -8.615850e-47 |
| Msa0231100 | Msa0231380 | 0.837329 | 5.544442e-57 | -8.615850e-47 |
| Msa0231380 | Msa0233730 | 0.805481 | 1.307433e-49 | -8.615850e-47 |
| Msa0231380 | Msa0236270 | 0.802409 | 5.688246e-49 | -8.615850e-47 |
| Msa0231380 | Msa0241800 | 0.815870 | 7.408005e-52 | -8.615850e-47 |
| Msa0231380 | Msa0242680 | 0.816371 | 5.723727e-52 | -8.615850e-47 |
| Msa0231380 | Msa0244780 | 0.817011 | 4.114585e-52 | -8.615850e-47 |
| Msa0231380 | Msa0249580 | 0.801038 | 1.087064e-48 | -8.615850e-47 |
| Msa0231380 | Msa0254940 | 0.822404 | 2.411939e-53 | -8.615850e-47 |
| Msa0231380 | Msa0268130 | 0.812119 | 4.977507e-51 | -8.615850e-47 |
| Msa0231380 | Msa0270660 | 0.998942 | 7.822843e-283 | -8.615850e-47 |
| Msa0231380 | Msa0277450 | 0.840038 | 1.105841e-57 | -8.615850e-47 |
| Msa0231380 | Msa0280430 | 0.803923 | 2.765250e-49 | -8.615850e-47 |
| Msa0231380 | Msa0296250 | 0.818495 | 1.903065e-52 | -8.615850e-47 |
| Msa0231380 | Msa0298990 | 0.810120 | 1.350024e-50 | -8.615850e-47 |
| Msa0231380 | Msa0304590 | 0.819089 | 1.394603e-52 | -8.615850e-47 |
| Msa0231380 | Msa0304660 | 0.815390 | 9.474361e-52 | -8.615850e-47 |
| Msa0231380 | Msa0317160 | 0.808914 | 2.450546e-50 | -8.615850e-47 |
| Msa0231380 | Msa0331700 | 0.815575 | 8.616843e-52 | -8.615850e-47 |
| Msa0231380 | Msa0337650 | 0.807063 | 6.069279e-50 | -8.615850e-47 |
| Msa0231380 | Msa0365100 | 0.813553 | 2.414705e-51 | -8.615850e-47 |
| Msa0231380 | Msa0376040 | 0.810496 | 1.119992e-50 | -8.615850e-47 |
| Msa0231380 | Msa0392940 | 0.816273 | 6.020785e-52 | -8.615850e-47 |
| Msa0231380 | Msa0402820 | 0.813362 | 2.660373e-51 | -8.615850e-47 |
| Msa0231380 | Msa0416400 | 0.803666 | 3.126726e-49 | -8.615850e-47 |
| Msa0231380 | Msa0423750 | 0.803535 | 3.328589e-49 | -8.615850e-47 |
| Msa0231380 | Msa0427120 | 0.805805 | 1.118133e-49 | -8.615850e-47 |
| Msa0231380 | Msa0428240 | 0.811574 | 6.541500e-51 | -8.615850e-47 |
| Msa0231380 | Msa0429950 | 0.805896 | 1.069637e-49 | -8.615850e-47 |
| Msa0231380 | Msa0431770 | 0.808600 | 2.860098e-50 | -8.615850e-47 |
| Msa0231380 | Msa0479200 | 0.800910 | 1.154590e-48 | -8.615850e-47 |
| Msa0231380 | Msa0508590 | 0.837996 | 3.737446e-57 | -8.615850e-47 |
| Msa0231380 | Msa0508630 | 0.818838 | 1.590119e-52 | -8.615850e-47 |
| Msa0231380 | Msa0516040 | 0.812195 | 4.790826e-51 | -8.615850e-47 |
| Msa0231380 | Msa0517840 | 0.812944 | 3.285100e-51 | -8.615850e-47 |
| Msa0231380 | Msa0519130 | 0.808710 | 2.710014e-50 | -8.615850e-47 |
| Msa0231380 | Msa0526540 | 0.847053 | 1.474980e-59 | -8.615850e-47 |
| Msa0231380 | Msa0527150 | 0.823077 | 1.681927e-53 | -8.615850e-47 |
| Msa0231380 | Msa0541860 | 0.815535 | 8.795679e-52 | -8.615850e-47 |
| Msa0231380 | Msa0555910 | 0.804918 | 1.715326e-49 | -8.615850e-47 |
| Msa0231380 | Msa0561430 | 0.801432 | 9.029834e-49 | -8.615850e-47 |
| Msa0231380 | Msa0571920 | 0.815313 | 9.854479e-52 | -8.615850e-47 |
| Msa0231380 | Msa0576940 | 0.839021 | 2.032307e-57 | -8.615850e-47 |
| Msa0231380 | Msa0581070 | 0.811315 | 7.445977e-51 | -8.615850e-47 |
| Msa0231380 | Msa0609450 | 0.801570 | 8.459574e-49 | -8.615850e-47 |
| Msa0231380 | Msa0616240 | 0.808777 | 2.621945e-50 | -8.615850e-47 |
| Msa0231380 | Msa0620990 | 0.812569 | 3.969099e-51 | -8.615850e-47 |
| Msa0231380 | Msa0638480 | 0.812683 | 3.747115e-51 | -8.615850e-47 |
| Msa0231380 | Msa0654870 | 0.806491 | 8.017674e-50 | -8.615850e-47 |
| Msa0231380 | Msa0661710 | 0.812030 | 5.204618e-51 | -8.615850e-47 |
| Msa0231380 | Msa0666230 | 0.813668 | 2.277677e-51 | -8.615850e-47 |
| Msa0231380 | Msa0679700 | 0.811878 | 5.615496e-51 | -8.615850e-47 |
| Msa0231380 | Msa0690250 | 0.807235 | 5.580333e-50 | -8.615850e-47 |
| Msa0231380 | Msa0692080 | 0.813741 | 2.195763e-51 | -8.615850e-47 |
| Msa0231380 | Msa0699570 | 0.806555 | 7.771508e-50 | -8.615850e-47 |
| Msa0231380 | Msa0703230 | 0.817238 | 3.657320e-52 | -8.615850e-47 |
| Msa0231380 | Msa0725000 | 0.800803 | 1.214194e-48 | -8.615850e-47 |
| Msa0231380 | Msa0738040 | 0.803415 | 3.524958e-49 | -8.615850e-47 |
| Msa0231380 | Msa0765270 | 0.804201 | 2.420156e-49 | -8.615850e-47 |
| Msa0231380 | Msa0784380 | 0.820571 | 6.393693e-53 | -8.615850e-47 |
| Msa0231380 | Msa0788770 | 0.813112 | 3.017535e-51 | -8.615850e-47 |
| Msa0231380 | Msa0789650 | 0.803922 | 2.766492e-49 | -8.615850e-47 |
| Msa0231380 | Msa0790610 | 0.997440 | 1.461579e-242 | -8.615850e-47 |
| Msa0231380 | Msa0808800 | 0.807149 | 5.818939e-50 | -8.615850e-47 |
| Msa0231380 | Msa0818170 | 0.825043 | 5.812515e-54 | -8.615850e-47 |
| Msa0231380 | Msa0845110 | 0.802846 | 4.621992e-49 | -8.615850e-47 |
| Msa0231380 | Msa0895790 | 0.807572 | 4.733548e-50 | -8.615850e-47 |
| Msa0231380 | Msa0927990 | 0.813513 | 2.464092e-51 | -8.615850e-47 |
| Msa0231380 | Msa0960830 | 0.832829 | 7.562832e-56 | -8.615850e-47 |
| Msa0231380 | Msa0977310 | 0.801765 | 7.716875e-49 | -8.615850e-47 |
| Msa0231380 | Msa1000930 | 0.826447 | 2.700055e-54 | -8.615850e-47 |
| Msa0231380 | Msa1004420 | 0.802391 | 5.736626e-49 | -8.615850e-47 |
| Msa0231380 | Msa1019240 | 0.811074 | 8.397449e-51 | -8.615850e-47 |
| Msa0231380 | Msa1019260 | 0.806685 | 7.296602e-50 | -8.615850e-47 |
| Msa0231380 | Msa1029070 | 0.800630 | 1.316720e-48 | -8.615850e-47 |
| Msa0231380 | Msa1040840 | 0.800182 | 1.624855e-48 | -8.615850e-47 |
| Msa0231380 | Msa1055010 | 0.813086 | 3.058409e-51 | -8.615850e-47 |
| Msa0231380 | Msa1066490 | 0.841215 | 5.437585e-58 | -8.615850e-47 |
| Msa0231380 | Msa1079230 | 0.824073 | 9.831523e-54 | -8.615850e-47 |
| Msa0231380 | Msa1082700 | 0.800327 | 1.518240e-48 | -8.615850e-47 |
| Msa0231380 | Msa1094420 | 0.809263 | 2.063458e-50 | -8.615850e-47 |
| Msa0231380 | Msa1104210 | 0.814194 | 1.744644e-51 | -8.615850e-47 |
| Msa0231380 | Msa1117550 | 0.800733 | 1.254770e-48 | -8.615850e-47 |
| Msa0231380 | Msa1124110 | 0.811581 | 6.516890e-51 | -8.615850e-47 |
| Msa0231380 | Msa1126510 | 0.806877 | 6.645577e-50 | -8.615850e-47 |
| Msa0231380 | Msa1126770 | 0.800224 | 1.593338e-48 | -8.615850e-47 |
| Msa0231380 | Msa1131170 | 0.818598 | 1.803164e-52 | -8.615850e-47 |
| Msa0231380 | Msa1131560 | 0.806453 | 8.166318e-50 | -8.615850e-47 |
| Msa0231380 | Msa1134110 | 0.842106 | 3.166837e-58 | -8.615850e-47 |
| Msa0231380 | Msa1155520 | 0.824070 | 9.850654e-54 | -8.615850e-47 |
| Msa0231380 | Msa1166870 | 0.813983 | 1.941656e-51 | -8.615850e-47 |
| Msa0231380 | Msa1168950 | 0.822809 | 1.942011e-53 | -8.615850e-47 |
| Msa0231380 | Msa1169040 | 0.822950 | 1.800033e-53 | -8.615850e-47 |
| Msa0231380 | Msa1173300 | 0.820457 | 6.790540e-53 | -8.615850e-47 |
| Msa0231380 | Msa1181850 | 0.817410 | 3.345415e-52 | -8.615850e-47 |
| Msa0231380 | Msa1181860 | 0.817982 | 2.485813e-52 | -8.615850e-47 |
| Msa0231380 | Msa1183660 | 0.806685 | 7.296602e-50 | -8.615850e-47 |
| Msa0231380 | Msa1184370 | 0.800069 | 1.713221e-48 | -8.615850e-47 |
| Msa0231380 | Msa1202580 | 0.818845 | 1.584599e-52 | -8.615850e-47 |
| Msa0231380 | Msa1227690 | 0.806182 | 9.312960e-50 | -8.615850e-47 |
| Msa0231380 | Msa1230580 | 0.815282 | 1.001162e-51 | -8.615850e-47 |
| Msa0231380 | Msa1253810 | 0.802129 | 6.496226e-49 | -8.615850e-47 |
| Msa0231380 | Msa1254730 | 0.802128 | 6.499371e-49 | -8.615850e-47 |
| Msa0231380 | Msa1256470 | 0.805619 | 1.223023e-49 | -8.615850e-47 |
| Msa0231380 | Msa1295110 | 0.821663 | 3.582741e-53 | -8.615850e-47 |
| Msa0231380 | Msa1307600 | 0.813139 | 2.976849e-51 | -8.615850e-47 |
| Msa0231380 | Msa1359270 | 0.818333 | 2.071000e-52 | -8.615850e-47 |
| Msa0231380 | Msa1363330 | 0.845747 | 3.349168e-59 | -8.615850e-47 |
| Msa0231380 | Msa1379760 | 0.824694 | 7.026790e-54 | -8.615850e-47 |
| Msa0231380 | Msa1385890 | 0.807886 | 4.060241e-50 | -8.615850e-47 |
| Msa0231380 | Msa1386600 | 0.845248 | 4.571609e-59 | -8.615850e-47 |
| Msa0231380 | Msa1386710 | 0.837530 | 4.922216e-57 | -8.615850e-47 |
| Msa0231380 | Msa1406040 | 0.803918 | 2.771589e-49 | -8.615850e-47 |
| Msa0231380 | Msa1423350 | 0.803682 | 3.102749e-49 | -8.615850e-47 |
| Msa0231380 | Msa1442850 | 0.807281 | 5.456442e-50 | -8.615850e-47 |
| Msa0231380 | Msa1448510 | 0.800963 | 1.126215e-48 | -8.615850e-47 |
| Msa0231380 | Msa1448690 | 0.804234 | 2.382213e-49 | -8.615850e-47 |
| Msa0231380 | Msa1450280 | 0.826038 | 3.378339e-54 | -8.615850e-47 |
| Msa0231380 | Msa1460320 | -0.803920 | 2.768585e-49 | -8.615850e-47 |
| Msa0231380 | Msa1461490 | 0.815797 | 7.691795e-52 | -8.615850e-47 |
| Msa0231380 | Msa1465680 | 0.801973 | 6.993155e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231380 | MtrunA17_Chr2g0277971 | 97.959 | 147 | 3 | 0 | 1 | 147 | 1 | 147 | 3.84e-101 | 286 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0231380 | AT1G60870.1 | 59.184 | 147 | 60 | 0 | 1 | 147 | 1 | 147 | 1.64e-33 | 115 |
Find 26 sgRNAs with CRISPR-Local
Find 25 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTGAGAAAGCAAGAAATA+TGG | 0.282094 | 2_2:-3607917 | Msa0231380:CDS |
| GCTTGGAAAGGAATTTCTTC+TGG | 0.317736 | 2_2:-3607808 | Msa0231380:CDS |
| AGCAGCTGCCCATGCTTTGT+AGG | 0.349595 | 2_2:+3608101 | None:intergenic |
| AAGAAATATGGGAAACTTGA+TGG | 0.389367 | 2_2:-3607905 | Msa0231380:CDS |
| GTGCCATGGATGAATTTAGA+AGG | 0.394252 | 2_2:-3607996 | Msa0231380:CDS |
| GGAATATCTCGACTCGGCTA+TGG | 0.422650 | 2_2:-3608022 | Msa0231380:CDS |
| GAGGATTTCAAGAGATGAAG+TGG | 0.462068 | 2_2:-3607956 | Msa0231380:CDS |
| GCTGAGAAAGCAAGAAATAT+GGG | 0.463308 | 2_2:-3607916 | Msa0231380:CDS |
| ATAAGATCTTCGATCGTCGA+TGG | 0.506443 | 2_2:+3608144 | None:intergenic |
| GAAAGGAATTTCTTCTGGCA+AGG | 0.513277 | 2_2:-3607803 | Msa0231380:CDS |
| AGATAGAATCCTACAAAGCA+TGG | 0.513381 | 2_2:-3608110 | Msa0231380:CDS |
| AAAGGAAGGTGAACTGAGAA+AGG | 0.516993 | 2_2:+3608199 | None:intergenic |
| CTGCTTCTATGAAATCTGCT+TGG | 0.529588 | 2_2:-3607825 | Msa0231380:CDS |
| GGTTTGAAGAAGAACTTGAG+AGG | 0.547329 | 2_2:-3607975 | Msa0231380:CDS |
| AAACCTTCTAAATTCATCCA+TGG | 0.552800 | 2_2:+3607993 | None:intergenic |
| TAAAGATTGATCTGAAAGGA+AGG | 0.570141 | 2_2:+3608185 | None:intergenic |
| AAAGTATATATGTATCAAGA+TGG | 0.576287 | 2_2:+3607775 | None:intergenic |
| CTCGGCTATGGAAAGTGCCA+TGG | 0.577831 | 2_2:-3608010 | Msa0231380:CDS |
| TCTATGAAATCTGCTTGGAA+AGG | 0.578134 | 2_2:-3607820 | Msa0231380:CDS |
| CATGTAAAGATTGATCTGAA+AGG | 0.594535 | 2_2:+3608181 | None:intergenic |
| AGCCGAGTCGAGATATTCCT+CGG | 0.604035 | 2_2:+3608026 | None:intergenic |
| TGAACTTGAGCAAGAAAGAG+AGG | 0.624850 | 2_2:-3608079 | Msa0231380:CDS |
| AGCCGAGGAATATCTCGACT+CGG | 0.631008 | 2_2:-3608028 | Msa0231380:CDS |
| GATAGAATCCTACAAAGCAT+GGG | 0.638623 | 2_2:-3608109 | Msa0231380:CDS |
| AGATGCAATGCAAGAAGCCG+AGG | 0.640190 | 2_2:-3608043 | Msa0231380:CDS |
| ACTTGAGCAAGAAAGAGAGG+TGG | 0.641638 | 2_2:-3608076 | Msa0231380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TAAAGATTGATCTGAAAGGA+AGG | + | chr2_2:3607817-3607836 | None:intergenic | 30.0% | |
| CATGTAAAGATTGATCTGAA+AGG | + | chr2_2:3607821-3607840 | None:intergenic | 30.0% | |
| AAACCTTCTAAATTCATCCA+TGG | + | chr2_2:3608009-3608028 | None:intergenic | 30.0% | |
| AAGAAATATGGGAAACTTGA+TGG | - | chr2_2:3608094-3608113 | Msa0231380:CDS | 30.0% | |
| AGATAGAATCCTACAAAGCA+TGG | - | chr2_2:3607889-3607908 | Msa0231380:CDS | 35.0% | |
| GATAGAATCCTACAAAGCAT+GGG | - | chr2_2:3607890-3607909 | Msa0231380:CDS | 35.0% | |
| AGCTGAGAAAGCAAGAAATA+TGG | - | chr2_2:3608082-3608101 | Msa0231380:CDS | 35.0% | |
| GCTGAGAAAGCAAGAAATAT+GGG | - | chr2_2:3608083-3608102 | Msa0231380:CDS | 35.0% | |
| TCTATGAAATCTGCTTGGAA+AGG | - | chr2_2:3608179-3608198 | Msa0231380:CDS | 35.0% | |
| AAAGGAAGGTGAACTGAGAA+AGG | + | chr2_2:3607803-3607822 | None:intergenic | 40.0% | |
| ATAAGATCTTCGATCGTCGA+TGG | + | chr2_2:3607858-3607877 | None:intergenic | 40.0% | |
| TGAACTTGAGCAAGAAAGAG+AGG | - | chr2_2:3607920-3607939 | Msa0231380:CDS | 40.0% | |
| GTGCCATGGATGAATTTAGA+AGG | - | chr2_2:3608003-3608022 | Msa0231380:CDS | 40.0% | |
| GGTTTGAAGAAGAACTTGAG+AGG | - | chr2_2:3608024-3608043 | Msa0231380:CDS | 40.0% | |
| GAGGATTTCAAGAGATGAAG+TGG | - | chr2_2:3608043-3608062 | Msa0231380:CDS | 40.0% | |
| CTGCTTCTATGAAATCTGCT+TGG | - | chr2_2:3608174-3608193 | Msa0231380:CDS | 40.0% | |
| GCTTGGAAAGGAATTTCTTC+TGG | - | chr2_2:3608191-3608210 | Msa0231380:CDS | 40.0% | |
| GAAAGGAATTTCTTCTGGCA+AGG | - | chr2_2:3608196-3608215 | Msa0231380:CDS | 40.0% | |
| ACTTGAGCAAGAAAGAGAGG+TGG | - | chr2_2:3607923-3607942 | Msa0231380:CDS | 45.0% | |
| AGATGCAATGCAAGAAGCCG+AGG | - | chr2_2:3607956-3607975 | Msa0231380:CDS | 50.0% | |
| AGCCGAGGAATATCTCGACT+CGG | - | chr2_2:3607971-3607990 | Msa0231380:CDS | 50.0% | |
| AGCCGAGTCGAGATATTCCT+CGG | + | chr2_2:3607976-3607995 | None:intergenic | 50.0% | |
| !! | GGAATATCTCGACTCGGCTA+TGG | - | chr2_2:3607977-3607996 | Msa0231380:CDS | 50.0% |
| AGCAGCTGCCCATGCTTTGT+AGG | + | chr2_2:3607901-3607920 | None:intergenic | 55.0% | |
| !! | CTCGGCTATGGAAAGTGCCA+TGG | - | chr2_2:3607989-3608008 | Msa0231380:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 3607789 | 3608232 | 3607789 | ID=Msa0231380;Name=Msa0231380 |
| chr2_2 | mRNA | 3607789 | 3608232 | 3607789 | ID=Msa0231380-mRNA-1;Parent=Msa0231380;Name=Msa0231380-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|147 |
| chr2_2 | exon | 3607789 | 3608232 | 3607789 | ID=Msa0231380-mRNA-1:exon:1465;Parent=Msa0231380-mRNA-1 |
| chr2_2 | CDS | 3607789 | 3608232 | 3607789 | ID=Msa0231380-mRNA-1:cds;Parent=Msa0231380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
