AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0614510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0614510 MtrunA17_Chr4g0050561 94.966 437 2 1 1 437 1 417 0.0 838
Msa0614510 MtrunA17_Chr8g0345461 50.681 367 150 5 61 423 72 411 1.45e-114 342
Msa0614510 MtrunA17_Chr1g0200081 50.000 372 154 6 61 423 72 420 5.33e-112 336
Msa0614510 MtrunA17_Chr7g0262801 46.135 401 185 5 30 427 65 437 3.36e-110 332
Msa0614510 MtrunA17_Chr1g0182711 48.986 345 155 2 83 427 115 438 4.00e-109 329
Msa0614510 MtrunA17_Chr3g0141901 45.767 378 170 3 58 421 24 380 6.93e-107 322
Msa0614510 MtrunA17_Chr3g0145011 44.531 384 185 3 45 421 21 383 2.86e-106 320
Msa0614510 MtrunA17_Chr1g0192151 49.359 312 137 2 113 424 124 414 2.54e-101 308
Msa0614510 MtrunA17_Chr4g0014731 49.359 312 137 2 113 424 125 415 3.29e-101 308
Msa0614510 MtrunA17_Chr3g0108321 46.233 292 136 2 70 361 73 343 5.57e-84 262
Msa0614510 MtrunA17_Chr1g0180791 41.797 256 125 3 158 413 207 438 2.23e-57 202
Msa0614510 MtrunA17_Chr1g0180791 33.894 357 202 8 52 404 379 705 4.28e-56 198
Msa0614510 MtrunA17_Chr7g0217421 37.248 298 154 6 127 422 17 283 5.00e-57 193
Msa0614510 MtrunA17_Chr6g0476861 38.768 276 146 3 161 434 202 456 1.12e-56 198
Msa0614510 MtrunA17_Chr4g0052411 39.098 266 140 3 157 422 230 473 1.67e-56 198
Msa0614510 MtrunA17_Chr7g0255651 38.722 266 142 2 139 404 265 509 2.18e-56 196
Msa0614510 MtrunA17_Chr7g0255651 27.308 260 162 6 149 403 4 241 2.85e-18 87.4
Msa0614510 MtrunA17_Chr7g0264521 32.323 396 221 9 52 430 380 745 2.96e-56 199
Msa0614510 MtrunA17_Chr7g0264521 41.016 256 127 3 158 413 208 439 5.23e-56 198
Msa0614510 MtrunA17_Chr3g0143721 37.456 283 153 4 149 429 240 500 9.79e-56 196
Msa0614510 MtrunA17_Chr2g0327121 37.868 272 147 3 133 404 458 707 3.05e-55 196
Msa0614510 MtrunA17_Chr2g0327121 39.924 263 134 3 151 413 202 440 5.60e-55 195
Msa0614510 MtrunA17_Chr7g0248361 34.402 343 180 7 114 434 132 451 3.07e-55 194
Msa0614510 MtrunA17_Chr2g0297281 38.346 266 142 3 157 422 287 530 3.74e-55 195
Msa0614510 MtrunA17_Chr3g0094871 38.849 278 146 4 161 436 16 271 7.20e-55 188
Msa0614510 MtrunA17_Chr7g0260601 38.163 283 140 4 161 435 245 500 1.06e-54 193
Msa0614510 MtrunA17_Chr8g0388371 37.638 271 141 3 158 421 406 655 2.09e-52 189
Msa0614510 MtrunA17_Chr5g0429571 37.857 280 147 4 151 424 308 566 3.88e-50 181
Msa0614510 MtrunA17_Chr4g0031821 36.594 276 152 3 161 434 325 579 7.77e-50 181
Msa0614510 MtrunA17_Chr7g0255691 39.098 266 141 2 139 404 269 513 1.01e-49 177
Msa0614510 MtrunA17_Chr7g0255691 32.794 247 131 6 159 397 20 239 5.84e-28 116
Msa0614510 MtrunA17_Chr8g0362771 38.491 265 139 3 158 422 239 479 1.03e-48 177
Msa0614510 MtrunA17_Chr3g0104211 37.226 274 145 4 157 424 305 557 1.04e-48 177
Msa0614510 MtrunA17_Chr7g0255641 35.689 283 158 3 152 432 654 914 4.07e-47 174
Msa0614510 MtrunA17_Chr7g0255641 32.906 234 120 6 195 417 432 639 2.41e-26 112
Msa0614510 MtrunA17_Chr7g0255721 36.396 283 156 3 152 432 681 941 5.86e-47 173
Msa0614510 MtrunA17_Chr7g0255721 30.328 244 143 4 161 403 391 608 5.85e-28 117
Msa0614510 MtrunA17_Chr2g0331161 35.955 267 145 4 150 414 409 651 4.69e-46 170
Msa0614510 MtrunA17_Chr4g0033451 36.996 273 140 6 157 421 381 629 4.94e-46 171
Msa0614510 MtrunA17_Chr1g0158881 36.496 274 148 3 157 430 330 577 1.86e-44 165
Msa0614510 MtrunA17_Chr6g0456351 35.294 289 146 6 158 437 319 575 8.02e-44 162
Msa0614510 MtrunA17_Chr3g0135721 36.330 267 145 3 156 422 224 465 9.35e-44 162
Msa0614510 MtrunA17_Chr3g0129971 37.329 292 150 6 119 404 264 528 1.01e-43 163
Msa0614510 MtrunA17_Chr2g0316851 36.905 252 129 5 158 403 596 823 3.98e-43 162
Msa0614510 MtrunA17_Chr3g0135761 37.023 262 140 3 161 422 227 463 8.00e-43 160
Msa0614510 MtrunA17_Chr4g0004121 33.758 314 154 8 150 436 236 522 8.50e-43 157
Msa0614510 MtrunA17_Chr7g0255901 35.075 268 148 6 148 412 631 875 1.24e-42 160
Msa0614510 MtrunA17_Chr4g0043381 36.948 249 133 2 156 404 837 1061 1.11e-41 158
Msa0614510 MtrunA17_Chr5g0432631 35.556 270 145 4 155 422 228 470 2.47e-41 156
Msa0614510 MtrunA17_Chr4g0026631 37.594 266 133 9 139 400 110 346 2.72e-41 152
Msa0614510 MtrunA17_Chr2g0277831 33.217 286 162 5 122 405 502 760 4.65e-41 155
Msa0614510 MtrunA17_Chr2g0277831 35.094 265 129 6 161 412 248 482 3.72e-35 138
Msa0614510 MtrunA17_Chr5g0397121 35.000 260 140 6 157 413 514 747 3.62e-40 153
Msa0614510 MtrunA17_Chr2g0321241 36.154 260 133 9 145 400 121 351 3.81e-39 146
Msa0614510 MtrunA17_Chr7g0246111 34.444 270 145 7 139 404 195 436 1.88e-38 145
Msa0614510 MtrunA17_Chr4g0052271 34.483 261 143 6 154 412 117 351 2.28e-38 143
Msa0614510 MtrunA17_Chr3g0127401 36.220 254 131 6 155 404 80 306 3.40e-38 142
Msa0614510 MtrunA17_Chr8g0387641 34.783 253 136 6 155 404 520 746 4.01e-38 147
Msa0614510 MtrunA17_Chr1g0195741 36.905 252 129 6 157 404 939 1164 7.19e-38 147
Msa0614510 MtrunA17_Chr1g0204031 37.052 251 129 6 157 404 558 782 1.40e-37 145
Msa0614510 MtrunA17_Chr2g0327231 39.037 187 93 2 151 337 341 506 2.28e-37 142
Msa0614510 MtrunA17_Chr2g0327231 44.211 95 49 1 151 245 148 238 2.64e-20 93.2
Msa0614510 MtrunA17_Chr3g0086411 33.228 316 158 7 141 428 200 490 2.43e-37 142
Msa0614510 MtrunA17_Chr3g0086411 38.971 136 78 2 272 402 15 150 8.61e-19 88.6
Msa0614510 MtrunA17_Chr1g0202371 35.458 251 132 6 157 404 398 621 2.75e-37 144
Msa0614510 MtrunA17_Chr5g0432641 33.955 268 152 4 163 430 198 440 3.85e-37 143
Msa0614510 MtrunA17_Chr4g0038101 36.000 250 132 5 158 404 723 947 3.92e-37 144
Msa0614510 MtrunA17_Chr3g0086401 32.808 317 158 6 141 427 370 661 4.83e-37 143
Msa0614510 MtrunA17_Chr3g0086401 35.102 245 121 8 159 393 96 312 2.33e-30 124
Msa0614510 MtrunA17_Chr3g0116131 36.585 246 126 6 157 398 903 1122 8.63e-37 143
Msa0614510 MtrunA17_Chr1g0195731 34.524 252 135 6 157 404 935 1160 5.54e-36 141
Msa0614510 MtrunA17_Chr6g0462581 35.317 252 131 8 157 404 501 724 1.32e-35 139
Msa0614510 MtrunA17_Chr4g0047411 34.276 283 149 7 161 422 180 446 1.81e-35 139
Msa0614510 MtrunA17_Chr3g0127431 35.433 254 133 6 155 404 83 309 2.28e-35 135
Msa0614510 MtrunA17_Chr1g0202381 34.766 256 128 7 157 404 469 693 3.25e-34 135
Msa0614510 MtrunA17_Chr6g0459561 30.195 308 164 11 150 436 376 653 3.93e-33 132
Msa0614510 MtrunA17_Chr3g0135781 40.437 183 82 4 158 339 57 213 4.07e-33 124
Msa0614510 MtrunA17_Chr1g0168321 36.019 211 113 2 226 434 196 386 2.44e-32 128
Msa0614510 MtrunA17_Chr6g0459541 31.000 300 152 10 133 404 20 292 6.36e-32 124
Msa0614510 MtrunA17_Chr2g0289231 30.000 250 137 7 157 397 298 518 5.12e-28 116
Msa0614510 MtrunA17_Chr4g0062081 62.338 77 28 1 161 236 12 88 1.78e-27 105
Msa0614510 MtrunA17_Chr8g0357301 28.897 263 148 5 179 432 492 724 1.71e-26 112
Msa0614510 MtrunA17_Chr6g0459551 29.167 288 140 10 150 404 96 352 7.57e-26 108
Msa0614510 MtrunA17_Chr1g0190401 32.061 262 145 9 141 393 659 896 1.79e-24 106
Msa0614510 MtrunA17_Chr5g0432391 32.258 186 98 4 234 417 81 240 7.59e-18 85.5
Msa0614510 MtrunA17_Chr6g0459531 26.923 260 130 11 150 404 61 265 8.73e-17 80.9
Msa0614510 MtrunA17_Chr8g0372701 30.412 194 105 8 156 346 222 388 3.02e-13 71.6
Msa0614510 MtrunA17_Chr6g0450161 30.317 221 103 9 194 390 364 557 1.37e-12 69.7
Msa0614510 MtrunA17_Chr2g0315911 26.425 193 113 6 163 352 210 376 3.95e-12 67.8
Msa0614510 MtrunA17_Chr2g0315971 26.804 194 112 7 163 352 477 644 5.76e-12 67.8
Msa0614510 MtrunA17_Chr2g0315971 25.758 198 119 5 157 352 196 367 3.55e-11 65.5
Msa0614510 MtrunA17_Chr2g0315991 26.705 176 101 5 179 352 220 369 6.62e-12 67.4
Msa0614510 MtrunA17_Chr3g0116941 28.108 185 105 4 196 371 199 364 6.85e-12 67.0
Msa0614510 MtrunA17_Chr5g0404651 28.652 178 99 5 171 346 229 380 7.49e-12 67.0
Msa0614510 MtrunA17_Chr5g0404661 28.235 170 106 5 179 346 248 403 3.31e-11 65.1
Msa0614510 MtrunA17_Chr5g0404291 32.927 164 81 7 194 356 389 524 6.34e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0614510 AT5G19990.1 89.749 439 23 2 1 437 1 419 0.0 785
Msa0614510 AT5G19990.3 89.749 439 23 2 1 437 1 419 0.0 785
Msa0614510 AT5G20000.1 88.838 439 27 2 1 437 1 419 0.0 778
Msa0614510 AT5G19990.2 93.548 372 4 1 66 437 10 361 0.0 699
Msa0614510 AT1G53750.1 50.681 367 150 5 61 423 72 411 2.46e-114 342
Msa0614510 AT2G20140.1 44.724 398 195 3 30 427 63 435 1.42e-109 330
Msa0614510 AT4G29040.1 44.724 398 195 3 30 427 63 435 2.19e-109 330
Msa0614510 AT5G43010.1 46.825 378 166 3 58 421 24 380 6.92e-109 327
Msa0614510 AT1G53780.3 49.864 367 153 4 61 423 243 582 8.40e-108 331
Msa0614510 AT1G53780.1 49.864 367 153 4 61 423 244 583 9.92e-108 331
Msa0614510 AT1G53780.4 49.864 367 153 4 61 423 244 583 9.92e-108 331
Msa0614510 AT1G53780.2 49.864 367 153 4 61 423 265 604 1.44e-107 331
Msa0614510 AT1G45000.1 46.667 375 165 3 61 421 27 380 1.86e-107 323
Msa0614510 AT1G09100.1 49.359 312 137 2 113 424 124 414 2.54e-101 308
Msa0614510 AT3G05530.1 49.359 312 137 2 113 424 125 415 8.67e-101 307
Msa0614510 AT5G58290.1 42.211 398 196 4 31 427 39 403 8.17e-100 304
Msa0614510 AT1G45000.2 43.590 273 119 3 61 319 27 278 1.44e-66 216
Msa0614510 AT1G06430.1 39.474 266 139 3 157 422 218 461 3.59e-58 202
Msa0614510 AT1G06430.3 39.474 266 139 3 157 422 218 461 3.59e-58 202
Msa0614510 AT1G06430.2 39.474 266 139 3 157 422 218 461 3.59e-58 202
Msa0614510 AT3G09840.1 40.684 263 132 3 151 413 199 437 1.80e-57 202
Msa0614510 AT3G09840.1 38.824 255 136 1 150 404 471 705 1.09e-54 195
Msa0614510 AT2G30950.1 39.098 266 140 3 157 422 225 468 2.40e-57 201
Msa0614510 AT2G30950.2 39.098 266 140 3 157 422 225 468 2.40e-57 201
Msa0614510 AT2G30950.3 39.098 266 140 3 157 422 225 468 2.40e-57 201
Msa0614510 AT2G30950.4 39.098 266 140 3 157 422 229 472 2.78e-57 200
Msa0614510 AT5G03340.1 40.304 263 133 3 151 413 199 437 1.07e-56 200
Msa0614510 AT5G03340.1 38.824 255 135 2 150 404 471 704 9.82e-56 197
Msa0614510 AT5G42270.1 37.102 283 154 4 149 429 238 498 9.24e-56 196
Msa0614510 AT3G53230.1 33.989 356 203 7 52 404 379 705 1.61e-55 197
Msa0614510 AT3G53230.1 39.098 266 138 3 151 416 200 441 2.77e-55 196
Msa0614510 AT1G50250.1 36.749 283 155 4 149 429 250 510 1.12e-54 194
Msa0614510 AT5G15250.1 36.842 266 146 3 157 422 222 465 1.04e-52 187
Msa0614510 AT2G03670.1 38.346 266 144 1 139 404 266 511 8.15e-52 184
Msa0614510 AT2G03670.1 33.977 259 151 4 161 417 24 264 1.19e-40 153
Msa0614510 AT1G07510.1 37.545 277 150 3 161 435 329 584 2.42e-51 185
Msa0614510 AT5G58870.1 37.993 279 150 3 157 433 327 584 5.76e-51 184
Msa0614510 AT4G23940.1 36.918 279 148 3 161 432 432 689 7.51e-51 185
Msa0614510 AT3G56690.1 38.722 266 141 2 139 404 704 947 1.38e-50 184
Msa0614510 AT3G56690.1 36.475 244 129 5 161 403 387 605 1.06e-38 149
Msa0614510 AT5G15250.2 34.602 289 144 5 157 422 222 488 2.14e-50 178
Msa0614510 AT3G47060.1 36.918 279 153 3 157 433 323 580 3.52e-50 182
Msa0614510 AT2G29080.1 39.350 277 144 4 161 435 324 578 1.81e-47 174
Msa0614510 AT2G26140.1 37.828 267 141 3 156 422 224 465 7.11e-47 172
Msa0614510 AT3G16290.1 35.793 271 148 4 150 418 401 647 5.58e-46 171
Msa0614510 AT1G05910.1 36.162 271 141 5 155 418 377 622 1.60e-45 169
Msa0614510 AT5G64580.1 37.262 263 137 5 157 413 314 554 1.88e-45 169
Msa0614510 AT3G02450.1 37.132 272 144 4 152 421 327 573 1.41e-44 164
Msa0614510 AT5G53170.1 36.496 274 148 3 157 430 360 607 1.98e-44 166
Msa0614510 AT1G03000.1 36.680 259 137 7 152 407 651 885 1.03e-42 161
Msa0614510 AT2G34560.1 34.965 286 153 7 154 431 98 358 1.23e-42 154
Msa0614510 AT2G34560.2 34.965 286 153 7 154 431 107 367 1.63e-42 154
Msa0614510 AT3G15120.2 36.905 252 127 5 158 402 728 954 3.84e-42 160
Msa0614510 AT3G15120.1 36.905 252 127 5 158 402 718 944 3.91e-42 160
Msa0614510 AT1G80350.1 34.076 314 153 9 150 436 230 516 4.33e-42 156
Msa0614510 AT5G08470.1 37.984 258 129 5 158 413 843 1071 7.45e-42 159
Msa0614510 AT5G08470.3 37.984 258 129 5 158 413 834 1062 7.93e-42 159
Msa0614510 AT2G03670.2 33.977 259 151 4 161 417 24 264 1.35e-41 153
Msa0614510 AT2G03670.2 34.463 177 96 1 139 315 266 422 1.55e-24 105
Msa0614510 AT2G27600.1 36.842 266 135 9 139 400 112 348 1.83e-39 147
Msa0614510 AT3G01610.1 37.154 253 133 5 153 404 522 749 1.98e-39 151
Msa0614510 AT3G01610.1 32.584 267 144 4 148 403 222 463 3.85e-35 139
Msa0614510 AT3G01610.2 37.154 253 133 5 153 404 522 749 2.38e-39 151
Msa0614510 AT3G01610.2 32.584 267 144 4 148 403 222 463 4.02e-35 139
Msa0614510 AT3G19740.1 37.450 251 127 6 158 404 703 927 7.12e-39 150
Msa0614510 AT2G45500.4 36.090 266 136 10 144 404 68 304 9.28e-39 143
Msa0614510 AT2G45500.3 36.090 266 136 10 144 404 68 304 9.28e-39 143
Msa0614510 AT4G02480.1 35.714 252 132 6 157 404 961 1186 2.80e-38 148
Msa0614510 AT1G50140.2 36.653 251 129 6 158 404 691 915 1.22e-37 146
Msa0614510 AT1G50140.5 36.653 251 129 6 158 404 691 915 1.22e-37 146
Msa0614510 AT1G50140.3 36.653 251 129 6 158 404 713 937 1.24e-37 146
Msa0614510 AT1G50140.1 36.653 251 129 6 158 404 713 937 1.24e-37 146
Msa0614510 AT1G50140.4 36.653 251 129 6 158 404 713 937 1.24e-37 146
Msa0614510 AT2G45500.2 35.766 274 142 10 136 404 193 437 1.34e-37 143
Msa0614510 AT2G45500.1 35.766 274 142 10 136 404 197 441 1.46e-37 143
Msa0614510 AT2G45500.5 35.766 274 142 10 136 404 203 447 1.52e-37 143
Msa0614510 AT4G28000.3 34.661 251 134 7 157 404 518 741 5.85e-37 144
Msa0614510 AT4G28000.2 34.661 251 134 7 157 404 518 741 5.85e-37 144
Msa0614510 AT4G28000.1 34.661 251 134 7 157 404 516 739 6.17e-37 144
Msa0614510 AT1G02890.1 35.317 252 133 6 157 404 942 1167 1.11e-36 144
Msa0614510 AT4G24860.1 34.783 253 137 5 155 404 816 1043 1.21e-36 143
Msa0614510 AT4G24860.3 34.783 253 137 5 155 404 814 1041 1.27e-36 143
Msa0614510 AT4G24860.4 34.783 253 137 5 155 404 789 1016 1.58e-36 143
Msa0614510 AT4G24860.2 34.783 253 137 5 155 404 812 1039 1.71e-36 143
Msa0614510 AT4G04910.1 34.397 282 148 8 161 421 217 482 3.00e-36 142
Msa0614510 AT1G64110.1 34.661 251 135 6 157 404 514 738 3.41e-36 142
Msa0614510 AT1G64110.5 34.661 251 135 6 157 404 517 741 3.53e-36 142
Msa0614510 AT1G64110.3 34.661 251 135 6 157 404 517 741 3.53e-36 142
Msa0614510 AT1G64110.2 34.661 251 135 6 157 404 519 743 3.57e-36 142
Msa0614510 AT1G64110.4 34.661 251 135 6 157 404 519 743 3.57e-36 142
Msa0614510 AT5G53540.1 33.101 287 149 8 155 425 83 342 6.24e-36 137
Msa0614510 AT4G27680.1 34.252 254 136 6 155 404 80 306 5.95e-35 134
Msa0614510 AT5G52882.1 33.865 251 136 7 157 404 515 738 1.95e-34 137
Msa0614510 AT3G27120.1 30.719 306 165 11 150 436 394 671 2.86e-33 132
Msa0614510 AT1G79560.1 30.268 261 143 5 181 432 514 744 7.71e-29 120
Msa0614510 AT1G79560.3 30.268 261 143 5 181 432 514 744 7.89e-29 120
Msa0614510 AT1G79560.2 30.268 261 143 5 181 432 514 744 8.38e-29 120
Msa0614510 AT1G62130.2 31.418 261 133 8 157 413 744 962 2.86e-27 115
Msa0614510 AT1G62130.1 31.418 261 133 8 157 413 751 969 3.23e-27 115
Msa0614510 AT4G04180.1 31.225 253 130 7 157 397 317 537 5.93e-27 114
Msa0614510 AT4G04180.2 31.225 253 130 7 157 397 312 532 7.41e-27 113
Msa0614510 AT3G04340.1 29.897 291 161 10 120 393 736 1000 1.05e-21 99.0
Msa0614510 AT5G08470.2 35.503 169 85 2 158 326 843 987 1.30e-21 98.6
Msa0614510 AT1G02890.2 29.365 252 120 6 157 404 942 1139 3.06e-21 97.4
Msa0614510 AT2G18193.1 27.179 195 110 4 156 346 206 372 2.63e-11 65.9

Find 122 sgRNAs with CRISPR-Local

Find 394 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTTAAAATTAAGAGTTTA+AGG 0.155258 4_2:-63573328 Msa0614510:three_prime_UTR
AAAAGCTCAGGATGTTTAAT+TGG 0.236938 4_2:+63575936 None:intergenic
TCACAGGGTGTCTTGCTCTA+TGG 0.253894 4_2:-63575795 Msa0614510:intron
CAAACCTCTTCATTAGGATT+TGG 0.256280 4_2:+63574818 None:intergenic
GTTGGGAGGGTATTCGATTT+TGG 0.269548 4_2:+63578871 None:intergenic
CTCCCCTTGTTTGGTTGGTT+TGG 0.269659 4_2:+63578552 None:intergenic
ACTTGAGTCTATAAAATTAA+AGG 0.291828 4_2:-63573302 Msa0614510:three_prime_UTR
GGAAGAACTGCAGCTTCTTC+AGG 0.294426 4_2:-63577346 Msa0614510:CDS
CTTACCGCACTTTCAGTTCA+TGG 0.305335 4_2:-63573479 Msa0614510:three_prime_UTR
TCAACAACATATTTCCCTTC+TGG 0.316681 4_2:+63576272 None:intergenic
GGATCTGCTCGTATGGAATC+TGG 0.325466 4_2:-63575195 Msa0614510:CDS
TGCTCCATCAATTATCTTCA+TGG 0.351085 4_2:-63575235 Msa0614510:CDS
TTAAATTCATTCTTCTTGAA+TGG 0.356511 4_2:+63574662 None:intergenic
ACGGAGACCCTCCCCTTGTT+TGG 0.367288 4_2:+63578543 None:intergenic
AAGATGCAAACCTCTTCATT+AGG 0.374465 4_2:+63574812 None:intergenic
AAACTAAAGAGAGTAATAAA+AGG 0.377403 4_2:+63573383 None:intergenic
GAGAAGGTTCTAGAATGGTT+AGG 0.383338 4_2:-63575668 Msa0614510:CDS
ATTTAAAATTAAGAGTTTAA+GGG 0.384322 4_2:-63573327 Msa0614510:three_prime_UTR
TGTACATTCATCAGGGTGTC+TGG 0.388654 4_2:-63575717 Msa0614510:CDS
CACAGGGTGTCTTGCTCTAT+GGG 0.390742 4_2:-63575794 Msa0614510:intron
TCGTCCATGAAGATAATTGA+TGG 0.392466 4_2:+63575231 None:intergenic
ATACTGATTGTACATTCATC+AGG 0.399410 4_2:-63575725 Msa0614510:CDS
TTATCGTACTGAATTTATAA+AGG 0.399505 4_2:-63578799 Msa0614510:intron
TTTGGACAGTGAGGATGCTT+CGG 0.403502 4_2:-63577368 Msa0614510:intron
AACGTAACGAGCTCAATTCT+AGG 0.412070 4_2:-63578441 Msa0614510:CDS
AGCATCTGGTGCTGAGCTTA+AGG 0.412390 4_2:-63574596 Msa0614510:intron
ACCAATGGATCAACTTTGCT+TGG 0.422834 4_2:+63576161 None:intergenic
TTCTTCTTCTTCGGACGCGA+TGG 0.425395 4_2:+63578835 None:intergenic
CACCAATCGGATTGATATCC+TGG 0.427746 4_2:-63574888 Msa0614510:CDS
TGTCAATCCGTCCAGGTCTC+AGG 0.427849 4_2:+63574855 None:intergenic
ATGGACGAAATTGACAGTAT+TGG 0.429793 4_2:-63575216 Msa0614510:CDS
CAGGAGCCTGGTTCTTATGT+TGG 0.430180 4_2:-63577327 Msa0614510:CDS
AAATTAAAGGAAAATAATAA+AGG 0.430807 4_2:-63573289 Msa0614510:three_prime_UTR
TTGGACAGTGAGGATGCTTC+GGG 0.433244 4_2:-63577367 Msa0614510:intron
AGTAGTGTTGCATATCATAT+TGG 0.433448 4_2:+63575275 None:intergenic
GTCTTGCTCTATGGGCCACC+TGG 0.438579 4_2:-63575786 Msa0614510:CDS
CTCTATGGGCCACCTGGTAC+AGG 0.438619 4_2:-63575780 Msa0614510:CDS
ATCATGTCATATGTAGAATC+AGG 0.441088 4_2:+63576113 None:intergenic
TCCAAGCAAAGTTGATCCAT+TGG 0.453561 4_2:-63576162 Msa0614510:CDS
AGTTGATCGGATCTGATCTA+TGG 0.459323 4_2:-63578632 Msa0614510:exon
TAGGCTGTGTGCACTGAAGC+TGG 0.461439 4_2:-63573679 Msa0614510:CDS
TGAGACCTGGACGGATTGAC+AGG 0.462916 4_2:-63574853 Msa0614510:CDS
TTGGCAGAGCAATGCTCCTC+CGG 0.467372 4_2:+63578571 None:intergenic
AGAAGGTTCTAGAATGGTTA+GGG 0.470154 4_2:-63575667 Msa0614510:CDS
CAGTATTGGATCTGCTCGTA+TGG 0.473028 4_2:-63575202 Msa0614510:CDS
CTGCAGCTTCTTCAGGAGCC+TGG 0.474864 4_2:-63577339 Msa0614510:CDS
TTCGGACGCGATGGTGAAGT+TGG 0.476366 4_2:+63578844 None:intergenic
AGACCCTCCCCTTGTTTGGT+TGG 0.479760 4_2:+63578547 None:intergenic
GTCTCAGGAGTGCTTGATCC+AGG 0.483737 4_2:+63574870 None:intergenic
TGAAGCTTCCAATAAGATCA+AGG 0.484032 4_2:-63575106 Msa0614510:intron
AACATTGTTGGCTAGGGCAG+TGG 0.488091 4_2:-63575754 Msa0614510:CDS
AAGCTTCAAATCCATCCAAC+TGG 0.490388 4_2:+63575121 None:intergenic
TGAAGTGCAGCGTACTATGC+TGG 0.493786 4_2:-63575154 Msa0614510:CDS
GAGAAGATGAATGGAGCATC+TGG 0.497037 4_2:-63574610 Msa0614510:CDS
ATGGTGAAGTTGGTGATGTT+GGG 0.498666 4_2:+63578854 None:intergenic
GAACTTGTTCAGAAATACAT+TGG 0.500672 4_2:-63575690 Msa0614510:CDS
CGAAGAGCAACTCTAGTAGA+TGG 0.500788 4_2:+63576215 None:intergenic
GAACTTCTCAACCAGTTGGA+TGG 0.502365 4_2:-63575132 Msa0614510:CDS
ACGTAACGAGCTCAATTCTA+GGG 0.502522 4_2:-63578440 Msa0614510:CDS
GAAGCATGCCGAGGGTGCAC+CGG 0.505872 4_2:-63578590 Msa0614510:CDS
AAGATTGCTGAGAAGATGAA+TGG 0.505915 4_2:-63574619 Msa0614510:CDS
GATCTGCTCGTATGGAATCT+GGG 0.507464 4_2:-63575194 Msa0614510:CDS
AGATTTGCTAAATAATAACT+TGG 0.508362 4_2:+63573429 None:intergenic
ATCTTCCTGTCAATCCGTCC+AGG 0.508744 4_2:+63574848 None:intergenic
ATGCTCCTCCGGTGCACCCT+CGG 0.511471 4_2:+63578582 None:intergenic
CATTGGAGAAGGTTCTAGAA+TGG 0.526027 4_2:-63575673 Msa0614510:CDS
ACATGTCATTGAGGAAGTTG+TGG 0.527779 4_2:-63573564 Msa0614510:CDS
GTTCAGAAATACATTGGAGA+AGG 0.530083 4_2:-63575684 Msa0614510:CDS
GATGGTGAAGTTGGTGATGT+TGG 0.530205 4_2:+63578853 None:intergenic
CTTTCAGTTCATGGTCACTC+TGG 0.534554 4_2:-63573470 Msa0614510:three_prime_UTR
GATTCTACATATGACATGAT+TGG 0.538886 4_2:-63576110 Msa0614510:CDS
GTGAAGTTGGTGATGTTGGG+AGG 0.539661 4_2:+63578857 None:intergenic
CAGGATATCAATCCGATTGG+TGG 0.543342 4_2:+63574889 None:intergenic
TTTCTTCAGGTCCATCCAGA+AGG 0.548623 4_2:-63576287 Msa0614510:intron
AAGGTACAACTGAACAAGAA+AGG 0.548726 4_2:+63573402 None:intergenic
GGCGAAGTCGTTAAAGTGAT+GGG 0.549245 4_2:-63577306 Msa0614510:CDS
GCATGCCGAGGGTGCACCGG+AGG 0.551420 4_2:-63578587 Msa0614510:CDS
TGGCGAAGTCGTTAAAGTGA+TGG 0.558114 4_2:-63577307 Msa0614510:CDS
ATTTCCAAATCCTAATGAAG+AGG 0.559940 4_2:-63574822 Msa0614510:intron
TCTGCCAAACCAACCAAACA+AGG 0.562521 4_2:-63578556 Msa0614510:CDS
GAATGTTTGCTCTGAGAGAG+AGG 0.563359 4_2:-63573657 Msa0614510:CDS
CAACATATTTCCCTTCTGGA+TGG 0.563974 4_2:+63576276 None:intergenic
CGTGGCAAAGGTGATGAAGA+AGG 0.564116 4_2:-63573599 Msa0614510:CDS
ACAAATCAAAGAAATAAAAG+AGG 0.566379 4_2:-63576075 Msa0614510:intron
GGAGCATGCTCCCTGTGAAA+AGG 0.571733 4_2:+63575252 None:intergenic
ATCCAGGATATCAATCCGAT+TGG 0.573250 4_2:+63574886 None:intergenic
GATCAAGCACTCCTGAGACC+TGG 0.576588 4_2:-63574866 Msa0614510:CDS
TTCTTCAGGTCCATCCAGAA+GGG 0.577294 4_2:-63576286 Msa0614510:intron
GATGGGCAAGAACAAAGTCT+TGG 0.577623 4_2:-63577289 Msa0614510:CDS
GCTCGTATGGAATCTGGGAG+TGG 0.580673 4_2:-63575189 Msa0614510:CDS
GAGGAGGGTACACGTGACAC+AGG 0.581105 4_2:-63573638 Msa0614510:CDS
TGAAGTTGGTGATGTTGGGA+GGG 0.586886 4_2:+63578858 None:intergenic
GCTGGAACTTCTCAACCAGT+TGG 0.589168 4_2:-63575136 Msa0614510:CDS
CGTTACGTTGCGCCTCGAGA+CGG 0.590961 4_2:+63578455 None:intergenic
TTTGAAGTAAATGTGTTCTG+AGG 0.594815 4_2:-63575308 Msa0614510:intron
ATGGAATCTGGGAGTGGCAA+TGG 0.596135 4_2:-63575183 Msa0614510:CDS
CTTCTTCATCACCTTTGCCA+CGG 0.600877 4_2:+63573600 None:intergenic
GGTGAAGGAGCTGAAGCTCA+TGG 0.606891 4_2:+63578500 None:intergenic
TGTGCTGAGTATAGTATTGA+CGG 0.610288 4_2:+63578524 None:intergenic
TCTACATATGACATGATTGG+TGG 0.611571 4_2:-63576107 Msa0614510:CDS
ACTTTCATCAGATTAACCAA+TGG 0.612930 4_2:+63576146 None:intergenic
CAAACCAACCAAACAAGGGG+AGG 0.622103 4_2:-63578551 Msa0614510:CDS
CATGAACTGAAAGTGCGGTA+AGG 0.622120 4_2:+63573480 None:intergenic
GTTTGCTCTGAGAGAGAGGA+GGG 0.624635 4_2:-63573653 Msa0614510:CDS
ATCTGATCTATGGCTGCCGT+CGG 0.626800 4_2:-63578622 Msa0614510:exon
TACTGATTGTACATTCATCA+GGG 0.626895 4_2:-63575724 Msa0614510:CDS
CAAGAACAAAGTCTTGGTCA+AGG 0.631707 4_2:-63577283 Msa0614510:intron
CTGCCAAACCAACCAAACAA+GGG 0.631755 4_2:-63578555 Msa0614510:CDS
TGCCAAACCAACCAAACAAG+GGG 0.631947 4_2:-63578554 Msa0614510:CDS
AGAAGAATGAATTTAATGCG+TGG 0.632686 4_2:-63574655 Msa0614510:CDS
GTAGAAGTGAAGCATGCCGA+GGG 0.639336 4_2:-63578598 Msa0614510:CDS
TCTTGGAATAGCTCAACCGA+AGG 0.650779 4_2:-63575907 Msa0614510:intron
AGTAGAAGTGAAGCATGCCG+AGG 0.652737 4_2:-63578599 Msa0614510:CDS
AAGCACTCCTGAGACCTGGA+CGG 0.655986 4_2:-63574862 Msa0614510:CDS
ACTTCGCCAACATAAGAACC+AGG 0.656877 4_2:+63577321 None:intergenic
AAACCAACCAAACAAGGGGA+GGG 0.659041 4_2:-63578550 Msa0614510:CDS
TGTTTGCTCTGAGAGAGAGG+AGG 0.667718 4_2:-63573654 Msa0614510:CDS
ATGCTTCACTTCTACTCCGA+CGG 0.669417 4_2:+63578606 None:intergenic
TCATAATCTTAACCGTCTCG+AGG 0.679147 4_2:-63578467 Msa0614510:CDS
GAGGGTACACGTGACACAGG+AGG 0.687991 4_2:-63573635 Msa0614510:CDS
CGTAACGAGCTCAATTCTAG+GGG 0.691922 4_2:-63578439 Msa0614510:intron
GTGACCATGAACTGAAAGTG+CGG 0.706684 4_2:+63573475 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAAAATTAAGAGTTTA+AGG - chr4_2:63578850-63578869 Msa0614510:five_prime_UTR 10.0%
!!! ATTTAAAATTAAGAGTTTAA+GGG - chr4_2:63578851-63578870 Msa0614510:five_prime_UTR 10.0%
!! AAATTAAAGGAAAATAATAA+AGG - chr4_2:63578889-63578908 Msa0614510:five_prime_UTR 10.0%
!! AATTATAAATTAGGGTTATT+AGG - chr4_2:63573442-63573461 Msa0614510:three_prime_UTR 15.0%
!!! TTTTATTGTTTTAAACAACT+GGG + chr4_2:63574003-63574022 None:intergenic 15.0%
!!! TTTTTATTGTTTTAAACAAC+TGG + chr4_2:63574004-63574023 None:intergenic 15.0%
!! AAACAATAAAAAATGATTAG+AGG - chr4_2:63574012-63574031 Msa0614510:intron 15.0%
!! AAATATAACTCAAATACATT+AGG + chr4_2:63574275-63574294 None:intergenic 15.0%
!!! ATGTATTTGAGTTATATTTT+TGG - chr4_2:63574276-63574295 Msa0614510:intron 15.0%
!! TTATCCAATAAATAATATCT+AGG - chr4_2:63574447-63574466 Msa0614510:intron 15.0%
!! AGAATTTAGATTAATCAATA+CGG + chr4_2:63575618-63575637 None:intergenic 15.0%
!!! ATTTTTTTTTAATGATGCTA+TGG - chr4_2:63577097-63577116 Msa0614510:intron 15.0%
!! GAATATTATATGAAAATGAA+AGG + chr4_2:63577754-63577773 None:intergenic 15.0%
!! AATAGTATGAAATATAAAAC+TGG - chr4_2:63578005-63578024 Msa0614510:intron 15.0%
!! ATAGTATGAAATATAAAACT+GGG - chr4_2:63578006-63578025 Msa0614510:intron 15.0%
!! TTATCGTACTGAATTTATAA+AGG - chr4_2:63573379-63573398 Msa0614510:three_prime_UTR 20.0%
!!! TAAGATTATGATTCTTTTGA+CGG + chr4_2:63573702-63573721 None:intergenic 20.0%
!! AAGAATAAAAAAGAGGAATA+GGG + chr4_2:63573779-63573798 None:intergenic 20.0%
!! ATTCAATTCAATAGAGAATA+AGG - chr4_2:63573861-63573880 Msa0614510:intron 20.0%
!! TTCAATTCAATAGAGAATAA+GGG - chr4_2:63573862-63573881 Msa0614510:intron 20.0%
!! AAGATATGAATTTGAAAACT+GGG + chr4_2:63574495-63574514 None:intergenic 20.0%
!!! ATCCAGAAAAGTTATTTTTT+GGG + chr4_2:63574769-63574788 None:intergenic 20.0%
!!! AATCCAGAAAAGTTATTTTT+TGG + chr4_2:63574770-63574789 None:intergenic 20.0%
!! TATAGCAGAATACTATTTAA+AGG - chr4_2:63575382-63575401 Msa0614510:intron 20.0%
!! TATTTAGATTAATCAATACG+AGG + chr4_2:63575476-63575495 None:intergenic 20.0%
!!! ATGTATAAAAGCATTTAAGA+AGG + chr4_2:63575532-63575551 None:intergenic 20.0%
!!! TAAATGCTTTTATACATAGT+TGG - chr4_2:63575535-63575554 Msa0614510:intron 20.0%
!! GAATTTAGATTAATCAATAC+GGG + chr4_2:63575617-63575636 None:intergenic 20.0%
!! TATAAGGATAAAAATTCCAT+AGG + chr4_2:63575722-63575741 None:intergenic 20.0%
!! CACTATTAAAGTGATTTATA+AGG + chr4_2:63575738-63575757 None:intergenic 20.0%
!! TTATTATTAATTTCATGCAC+AGG + chr4_2:63575831-63575850 None:intergenic 20.0%
!!! CTTTTATTTCTTTGATTTGT+TGG + chr4_2:63576103-63576122 None:intergenic 20.0%
!! ACAAATCAAAGAAATAAAAG+AGG - chr4_2:63576103-63576122 Msa0614510:CDS 20.0%
!!! TCATTTACATCAAATTTTAC+AGG - chr4_2:63576208-63576227 Msa0614510:CDS 20.0%
!! AAAAATTACCTTGATCTTAT+TGG + chr4_2:63577083-63577102 None:intergenic 20.0%
!! TAAATATAAAACTGTAACAG+AGG - chr4_2:63577172-63577191 Msa0614510:intron 20.0%
!! AAATATAAAACTGTAACAGA+GGG - chr4_2:63577173-63577192 Msa0614510:intron 20.0%
!!! ATATAGTTGTTTTCAGTAAA+TGG + chr4_2:63577463-63577482 None:intergenic 20.0%
!! TTAAATTCATTCTTCTTGAA+TGG + chr4_2:63577519-63577538 None:intergenic 20.0%
!!! ATCATCTAAAATATTGTCAT+CGG - chr4_2:63577654-63577673 Msa0614510:intron 20.0%
!! ATATTCAGATAAAATTATGC+TGG - chr4_2:63578327-63578346 Msa0614510:intron 20.0%
!!! TGATTTGTATTTTATGTTTC+TGG - chr4_2:63578640-63578659 Msa0614510:intron 20.0%
!!! AGATTTGCTAAATAATAACT+TGG + chr4_2:63578752-63578771 None:intergenic 20.0%
!! AAACTAAAGAGAGTAATAAA+AGG + chr4_2:63578798-63578817 None:intergenic 20.0%
!! ACTTGAGTCTATAAAATTAA+AGG - chr4_2:63578876-63578895 Msa0614510:five_prime_UTR 20.0%
!!! ATTTTGGTAGAATTGAATTG+GGG + chr4_2:63573294-63573313 None:intergenic 25.0%
!!! GATTTTGGTAGAATTGAATT+GGG + chr4_2:63573295-63573314 None:intergenic 25.0%
! TTGGGGGTTAATTATAAATT+AGG - chr4_2:63573433-63573452 Msa0614510:three_prime_UTR 25.0%
! TGGGGGTTAATTATAAATTA+GGG - chr4_2:63573434-63573453 Msa0614510:three_prime_UTR 25.0%
!! TGAATCTGATTTGTAGAATT+AGG - chr4_2:63573474-63573493 Msa0614510:three_prime_UTR 25.0%
!! GAATCTGATTTGTAGAATTA+GGG - chr4_2:63573475-63573494 Msa0614510:three_prime_UTR 25.0%
!!! TATTTTACAGTAGAGTTGAT+CGG - chr4_2:63573533-63573552 Msa0614510:three_prime_UTR 25.0%
! CAAGAATAAAAAAGAGGAAT+AGG + chr4_2:63573780-63573799 None:intergenic 25.0%
! GCAATTCAAGAATAAAAAAG+AGG + chr4_2:63573786-63573805 None:intergenic 25.0%
! TCAATTCAATAGAGAATAAG+GGG - chr4_2:63573863-63573882 Msa0614510:intron 25.0%
!!! AAACTTTGGTTTGTTTATGT+GGG - chr4_2:63574155-63574174 Msa0614510:intron 25.0%
! CACACCTAGATATTATTTAT+TGG + chr4_2:63574454-63574473 None:intergenic 25.0%
! GAAGATATGAATTTGAAAAC+TGG + chr4_2:63574496-63574515 None:intergenic 25.0%
! TCTATCACATCAAACTTATT+AGG - chr4_2:63574514-63574533 Msa0614510:intron 25.0%
!!! ATTTTCTTTTGCTGTAAGAT+CGG - chr4_2:63574555-63574574 Msa0614510:intron 25.0%
! AAATGATAGTAAATCAGTGA+AGG + chr4_2:63574664-63574683 None:intergenic 25.0%
!!! TCCAGAAAAGTTATTTTTTG+GGG + chr4_2:63574768-63574787 None:intergenic 25.0%
! ATATATAACAGTACAGATAG+CGG + chr4_2:63574990-63575009 None:intergenic 25.0%
!! CTCTTTTCATTATTCATTGT+TGG - chr4_2:63575253-63575272 Msa0614510:CDS 25.0%
! GAAGCATAGATCAATAAAAA+TGG + chr4_2:63575449-63575468 None:intergenic 25.0%
! TAAATACTCATGTACATTGT+TGG - chr4_2:63575490-63575509 Msa0614510:intron 25.0%
! AGTATTCAGACTAATCAATA+CGG + chr4_2:63575582-63575601 None:intergenic 25.0%
! ACATAAATCTTCACTTCTTA+AGG + chr4_2:63575672-63575691 None:intergenic 25.0%
!! CCAAGATTCTGTAATATTTT+AGG + chr4_2:63575695-63575714 None:intergenic 25.0%
! CCTAAAATATTACAGAATCT+TGG - chr4_2:63575692-63575711 Msa0614510:CDS 25.0%
! AAATATTACAGAATCTTGGT+TGG - chr4_2:63575696-63575715 Msa0614510:CDS 25.0%
!!! TTGTGAGACATTGTTTTTTT+AGG + chr4_2:63576824-63576843 None:intergenic 25.0%
! GAAGAGAAAATTGCAATTAT+AGG - chr4_2:63577257-63577276 Msa0614510:intron 25.0%
!!! ATTGCAATTATAGGTTTTGA+TGG - chr4_2:63577266-63577285 Msa0614510:intron 25.0%
! CTCAATACAATCATATCAAA+GGG + chr4_2:63577405-63577424 None:intergenic 25.0%
! TCTCAATACAATCATATCAA+AGG + chr4_2:63577406-63577425 None:intergenic 25.0%
! TATATGTATATGTATGCTGA+AGG + chr4_2:63577440-63577459 None:intergenic 25.0%
!!! AATGGATTTTCAAGATATCT+CGG + chr4_2:63577501-63577520 None:intergenic 25.0%
! AAACAAAGTGATTGCATAAT+GGG + chr4_2:63577776-63577795 None:intergenic 25.0%
!! AATTTTACAATGCGAAACAA+AGG - chr4_2:63577819-63577838 Msa0614510:intron 25.0%
! CAACAATAACATGTTAATGT+TGG + chr4_2:63577857-63577876 None:intergenic 25.0%
! CAACAATAACATGTTAATGT+TGG + chr4_2:63577857-63577876 None:intergenic 25.0%
! TAATAGTTGATTGGATTGTT+GGG - chr4_2:63578102-63578121 Msa0614510:intron 25.0%
!! TTAACACATTATTTCAAGTG+TGG - chr4_2:63578440-63578459 Msa0614510:CDS 25.0%
!!! TCTGTGCTTTTATTTTATGT+AGG - chr4_2:63578480-63578499 Msa0614510:CDS 25.0%
!! CGATTTTGGTAGAATTGAAT+TGG + chr4_2:63573296-63573315 None:intergenic 30.0%
TTCTTCTTCTTCTTCTTCTT+CGG + chr4_2:63573355-63573374 None:intergenic 30.0%
!!! TCGCTCTTATTTTGGAATTT+GGG - chr4_2:63573415-63573434 Msa0614510:three_prime_UTR 30.0%
ATAAACGGAATCAAAATCTG+AGG + chr4_2:63573909-63573928 None:intergenic 30.0%
AAAATGATTAGAGGACATTG+TGG - chr4_2:63574021-63574040 Msa0614510:intron 30.0%
AATATGGAATTCAACAAGGT+TGG - chr4_2:63574068-63574087 Msa0614510:intron 30.0%
!! CAAACTTTGGTTTGTTTATG+TGG - chr4_2:63574154-63574173 Msa0614510:intron 30.0%
CTATATATACACACAAAACC+AGG - chr4_2:63574219-63574238 Msa0614510:intron 30.0%
AAACAAACAAAAGCTTATCC+TGG + chr4_2:63574240-63574259 None:intergenic 30.0%
ATATGAATTTGAAAACTGGG+AGG + chr4_2:63574492-63574511 None:intergenic 30.0%
TCACATCAAACTTATTAGGA+AGG - chr4_2:63574518-63574537 Msa0614510:intron 30.0%
!!! CAGAAAAGTTATTTTTTGGG+GGG + chr4_2:63574766-63574785 None:intergenic 30.0%
!!! CCAGAAAAGTTATTTTTTGG+GGG + chr4_2:63574767-63574786 None:intergenic 30.0%
TACCTGATTCAATTGCAATT+TGG - chr4_2:63574792-63574811 Msa0614510:intron 30.0%
AAAAACAAATTGAGCCATCA+TGG + chr4_2:63574962-63574981 None:intergenic 30.0%
TTGTTAAATAGCAGCTATAG+TGG - chr4_2:63575037-63575056 Msa0614510:intron 30.0%
AGTGTATTATGCAACAATAG+TGG + chr4_2:63575091-63575110 None:intergenic 30.0%
TATTCAGACTAATCAATACG+GGG + chr4_2:63575580-63575599 None:intergenic 30.0%
GTATTCAGACTAATCAATAC+GGG + chr4_2:63575581-63575600 None:intergenic 30.0%
GAACTCATGACTATATCTAA+TGG - chr4_2:63575792-63575811 Msa0614510:CDS 30.0%
TTATTAATTTCATGCACAGG+TGG + chr4_2:63575828-63575847 None:intergenic 30.0%
GAACAAAAAATCCTAGACAA+AGG - chr4_2:63575851-63575870 Msa0614510:intron 30.0%
!! AGTTTCCATTACTTTTCTTC+AGG - chr4_2:63575878-63575897 Msa0614510:intron 30.0%
ACTTTCATCAGATTAACCAA+TGG + chr4_2:63576035-63576054 None:intergenic 30.0%
ATCATGTCATATGTAGAATC+AGG + chr4_2:63576068-63576087 None:intergenic 30.0%
GATTCTACATATGACATGAT+TGG - chr4_2:63576068-63576087 Msa0614510:intron 30.0%
AAAAGCTCAGGATGTTTAAT+TGG + chr4_2:63576245-63576264 None:intergenic 30.0%
AACTCATGCAATATTACCTT+CGG + chr4_2:63576290-63576309 None:intergenic 30.0%
! TACTCTATTTTACGTATCAC+AGG - chr4_2:63576367-63576386 Msa0614510:intron 30.0%
! ACTCTATTTTACGTATCACA+GGG - chr4_2:63576368-63576387 Msa0614510:intron 30.0%
! ATACTGATTGTACATTCATC+AGG - chr4_2:63576453-63576472 Msa0614510:intron 30.0%
! TACTGATTGTACATTCATCA+GGG - chr4_2:63576454-63576473 Msa0614510:intron 30.0%
! GAACTTGTTCAGAAATACAT+TGG - chr4_2:63576488-63576507 Msa0614510:intron 30.0%
ATAATGAATGGAGTAGGTTT+AGG + chr4_2:63576569-63576588 None:intergenic 30.0%
TCGCATCAACATAAATAAGA+GGG - chr4_2:63576592-63576611 Msa0614510:intron 30.0%
ACATTTACTTCAAATGAGCA+TGG + chr4_2:63576864-63576883 None:intergenic 30.0%
! TTTGAAGTAAATGTGTTCTG+AGG - chr4_2:63576870-63576889 Msa0614510:intron 30.0%
AGTAGTGTTGCATATCATAT+TGG + chr4_2:63576906-63576925 None:intergenic 30.0%
ATTAGAGGGAATTCCAAAAT+TGG - chr4_2:63577126-63577145 Msa0614510:intron 30.0%
GTGAACGTATATCTCAAATT+AGG + chr4_2:63577220-63577239 None:intergenic 30.0%
GATATACGTTCACAATTTAG+AGG - chr4_2:63577227-63577246 Msa0614510:intron 30.0%
ATTTCCAAATCCTAATGAAG+AGG - chr4_2:63577356-63577375 Msa0614510:CDS 30.0%
AGAAGAATGAATTTAATGCG+TGG - chr4_2:63577523-63577542 Msa0614510:intron 30.0%
ATACCTTAATTGCTTCAACA+AGG + chr4_2:63577680-63577699 None:intergenic 30.0%
GCACTTATTGAGATAAACAA+CGG - chr4_2:63577725-63577744 Msa0614510:intron 30.0%
CACTTATTGAGATAAACAAC+GGG - chr4_2:63577726-63577745 Msa0614510:intron 30.0%
CAAACAAAGTGATTGCATAA+TGG + chr4_2:63577777-63577796 None:intergenic 30.0%
! TATGCAATCACTTTGTTTGA+TGG - chr4_2:63577778-63577797 Msa0614510:intron 30.0%
! ATGCAATCACTTTGTTTGAT+GGG - chr4_2:63577779-63577798 Msa0614510:intron 30.0%
! GTTGTCTAAGATATTATCTC+AGG - chr4_2:63577876-63577895 Msa0614510:intron 30.0%
! GTTGTCTAAGATATTATCTC+AGG - chr4_2:63577876-63577895 Msa0614510:intron 30.0%
CTAATAGTTGATTGGATTGT+TGG - chr4_2:63578101-63578120 Msa0614510:intron 30.0%
CAGTTATAAACACTTCATAG+TGG - chr4_2:63578186-63578205 Msa0614510:intron 30.0%
ATTATGCTGGAATGTCATAA+TGG - chr4_2:63578340-63578359 Msa0614510:intron 30.0%
GAAGAAGAAGAAGAAGAAGA+AGG - chr4_2:63573354-63573373 Msa0614510:three_prime_UTR 35.0%
!!! CTCGCTCTTATTTTGGAATT+TGG - chr4_2:63573414-63573433 Msa0614510:three_prime_UTR 35.0%
!!! CGCTCTTATTTTGGAATTTG+GGG - chr4_2:63573416-63573435 Msa0614510:three_prime_UTR 35.0%
!!! GCTCTTATTTTGGAATTTGG+GGG - chr4_2:63573417-63573436 Msa0614510:three_prime_UTR 35.0%
! TGTGCTGAGTATAGTATTGA+CGG + chr4_2:63573657-63573676 None:intergenic 35.0%
! TATGATTCTTTTGACGGTGA+AGG + chr4_2:63573696-63573715 None:intergenic 35.0%
CAATAGAGAATAAGGGGATA+TGG - chr4_2:63573869-63573888 Msa0614510:intron 35.0%
!! GTTGATTTGTATCACCCTTT+GGG - chr4_2:63573941-63573960 Msa0614510:intron 35.0%
!! TTGATTTGTATCACCCTTTG+GGG - chr4_2:63573942-63573961 Msa0614510:intron 35.0%
TTTAAACAACTGGGTGTAGA+TGG + chr4_2:63573994-63574013 None:intergenic 35.0%
GGGTAATATGGAATTCAACA+AGG - chr4_2:63574064-63574083 Msa0614510:intron 35.0%
CTCAATTTCTCCAACAAGAT+TGG + chr4_2:63574108-63574127 None:intergenic 35.0%
!! TTGGTTTGTTTATGTGGGTT+TGG - chr4_2:63574160-63574179 Msa0614510:intron 35.0%
!! TGGTTTGTTTATGTGGGTTT+GGG - chr4_2:63574161-63574180 Msa0614510:intron 35.0%
GACAAATATTGTCCTTTGAG+CGG - chr4_2:63574314-63574333 Msa0614510:intron 35.0%
! CCCCCAAAAAATAACTTTTC+TGG - chr4_2:63574764-63574783 Msa0614510:intron 35.0%
GTCCAAATTGCAATTGAATC+AGG + chr4_2:63574797-63574816 None:intergenic 35.0%
GAATTGTCTATGTCTCACAT+TGG - chr4_2:63575275-63575294 Msa0614510:CDS 35.0%
!! GAAAAGTTTTGACAAGACCA+CGG + chr4_2:63575355-63575374 None:intergenic 35.0%
TTATGTATCTTCGAGTCCAT+GGG - chr4_2:63575409-63575428 Msa0614510:intron 35.0%
TCATGACTATATCTAATGGC+AGG - chr4_2:63575796-63575815 Msa0614510:intron 35.0%
ATGGACCTGAAGAAAAGTAA+TGG + chr4_2:63575886-63575905 None:intergenic 35.0%
TCAACAACATATTTCCCTTC+TGG + chr4_2:63575909-63575928 None:intergenic 35.0%
TCTACATATGACATGATTGG+TGG - chr4_2:63576071-63576090 Msa0614510:intron 35.0%
! AACAATGTTTTTCCTGTACC+AGG + chr4_2:63576413-63576432 None:intergenic 35.0%
TGGTACAGGAAAAACATTGT+TGG - chr4_2:63576412-63576431 Msa0614510:intron 35.0%
! AGGAAAAACATTGTTGGCTA+GGG - chr4_2:63576418-63576437 Msa0614510:intron 35.0%
GTTCAGAAATACATTGGAGA+AGG - chr4_2:63576494-63576513 Msa0614510:intron 35.0%
!! AGAAGGTTCTAGAATGGTTA+GGG - chr4_2:63576511-63576530 Msa0614510:intron 35.0%
! GGTTAGGGAACTTTTTGTTA+TGG - chr4_2:63576526-63576545 Msa0614510:intron 35.0%
TTGATGCGACACATAATGAA+TGG + chr4_2:63576581-63576600 None:intergenic 35.0%
GTCGCATCAACATAAATAAG+AGG - chr4_2:63576591-63576610 Msa0614510:intron 35.0%
ATGGTCGAAGATATATCTGA+TGG - chr4_2:63576650-63576669 Msa0614510:intron 35.0%
TGGTCGAAGATATATCTGAT+GGG - chr4_2:63576651-63576670 Msa0614510:intron 35.0%
TACAACTTCAGCAGTTACTA+GGG + chr4_2:63576710-63576729 None:intergenic 35.0%
ATACAACTTCAGCAGTTACT+AGG + chr4_2:63576711-63576730 None:intergenic 35.0%
ACCTTCGAAAAGACAACAAT+GGG - chr4_2:63576790-63576809 Msa0614510:intron 35.0%
TGCTCCATCAATTATCTTCA+TGG - chr4_2:63576943-63576962 Msa0614510:intron 35.0%
TCGTCCATGAAGATAATTGA+TGG + chr4_2:63576950-63576969 None:intergenic 35.0%
ATGGACGAAATTGACAGTAT+TGG - chr4_2:63576962-63576981 Msa0614510:intron 35.0%
TGAAGCTTCCAATAAGATCA+AGG - chr4_2:63577072-63577091 Msa0614510:intron 35.0%
! ATGCTATGGTAGTGTATTAG+AGG - chr4_2:63577111-63577130 Msa0614510:intron 35.0%
! TGCTATGGTAGTGTATTAGA+GGG - chr4_2:63577112-63577131 Msa0614510:intron 35.0%
! AACACACATGTTGCCAATTT+TGG + chr4_2:63577142-63577161 None:intergenic 35.0%
CAAACCTCTTCATTAGGATT+TGG + chr4_2:63577363-63577382 None:intergenic 35.0%
AAGATGCAAACCTCTTCATT+AGG + chr4_2:63577369-63577388 None:intergenic 35.0%
AAGATTGCTGAGAAGATGAA+TGG - chr4_2:63577559-63577578 Msa0614510:intron 35.0%
TTAGATGATAATAGAGCAGC+AGG + chr4_2:63577643-63577662 None:intergenic 35.0%
! TGCAATCACTTTGTTTGATG+GGG - chr4_2:63577780-63577799 Msa0614510:intron 35.0%
AGATATTATCTCAGGTCATG+AGG - chr4_2:63577884-63577903 Msa0614510:intron 35.0%
AGATATTATCTCAGGTCATG+AGG - chr4_2:63577884-63577903 Msa0614510:intron 35.0%
TTCATTTCAGAGTGAAGAAC+TGG - chr4_2:63578041-63578060 Msa0614510:intron 35.0%
TCATTTCAGAGTGAAGAACT+GGG - chr4_2:63578042-63578061 Msa0614510:intron 35.0%
AGAACTGGGTGTAATAGTAA+CGG - chr4_2:63578056-63578075 Msa0614510:intron 35.0%
! TAGTAACGGAGAACTAAACA+TGG - chr4_2:63578070-63578089 Msa0614510:intron 35.0%
! AGTAACGGAGAACTAAACAT+GGG - chr4_2:63578071-63578090 Msa0614510:intron 35.0%
! GTGGGTTACTAATAGTTGAT+TGG - chr4_2:63578093-63578112 Msa0614510:intron 35.0%
ATAAACACTTCATAGTGGTG+AGG - chr4_2:63578191-63578210 Msa0614510:intron 35.0%
TAAACACTTCATAGTGGTGA+GGG - chr4_2:63578192-63578211 Msa0614510:intron 35.0%
! CAAAGTTTGGGTTTATTCCA+TGG - chr4_2:63578250-63578269 Msa0614510:intron 35.0%
GCTATGAATTTACGTGTTCA+TGG - chr4_2:63578375-63578394 Msa0614510:intron 35.0%
CACAGAAAATTGAGCATACT+AGG + chr4_2:63578466-63578485 None:intergenic 35.0%
! CCTCAATGACATGTTTTTCT+CGG + chr4_2:63578608-63578627 None:intergenic 35.0%
AAGGTACAACTGAACAAGAA+AGG + chr4_2:63578779-63578798 None:intergenic 35.0%
!! ATGGTGAAGTTGGTGATGTT+GGG + chr4_2:63573327-63573346 None:intergenic 40.0%
!! TCTCTCTCTCGCTCTTATTT+TGG - chr4_2:63573407-63573426 Msa0614510:three_prime_UTR 40.0%
AGTTGATCGGATCTGATCTA+TGG - chr4_2:63573546-63573565 Msa0614510:exon 40.0%
TCATAATCTTAACCGTCTCG+AGG - chr4_2:63573711-63573730 Msa0614510:intron 40.0%
AACGTAACGAGCTCAATTCT+AGG - chr4_2:63573737-63573756 Msa0614510:intron 40.0%
ACGTAACGAGCTCAATTCTA+GGG - chr4_2:63573738-63573757 Msa0614510:intron 40.0%
ATTCCGTTTATTTACCCCTC+TGG - chr4_2:63573918-63573937 Msa0614510:intron 40.0%
TTCCGTTTATTTACCCCTCT+GGG - chr4_2:63573919-63573938 Msa0614510:intron 40.0%
AACCCAGAGGGGTAAATAAA+CGG + chr4_2:63573924-63573943 None:intergenic 40.0%
TGATACAAATCAACCCAGAG+GGG + chr4_2:63573935-63573954 None:intergenic 40.0%
GTGATACAAATCAACCCAGA+GGG + chr4_2:63573936-63573955 None:intergenic 40.0%
!! GGTTGATTTGTATCACCCTT+TGG - chr4_2:63573940-63573959 Msa0614510:intron 40.0%
ACACCTTAGATAACCCCAAA+GGG + chr4_2:63573958-63573977 None:intergenic 40.0%
TAGTCACAGACCAATCTTGT+TGG - chr4_2:63574095-63574114 Msa0614510:intron 40.0%
GGAGAAATTGAGAGTAGTGA+AGG - chr4_2:63574116-63574135 Msa0614510:intron 40.0%
TGAGAGTAGTGAAGGTGATT+TGG - chr4_2:63574124-63574143 Msa0614510:intron 40.0%
ATTTGGTCACTGGCAAACTT+TGG - chr4_2:63574141-63574160 Msa0614510:intron 40.0%
AAATATTGTCCTTTGAGCGG+TGG - chr4_2:63574317-63574336 Msa0614510:intron 40.0%
TTTGAAAAACCACCGCTCAA+AGG + chr4_2:63574329-63574348 None:intergenic 40.0%
!! CGGTGGTTTTTCAAAGTAGT+AGG - chr4_2:63574334-63574353 Msa0614510:intron 40.0%
CAGATACTGACAACATCAAC+TGG - chr4_2:63574369-63574388 Msa0614510:intron 40.0%
ATATCTAGGTGTGAGCTGTA+TGG - chr4_2:63574461-63574480 Msa0614510:intron 40.0%
TGAATTTGAAAACTGGGAGG+AGG + chr4_2:63574489-63574508 None:intergenic 40.0%
!! TCTTTTGCTGTAAGATCGGT+TGG - chr4_2:63574559-63574578 Msa0614510:intron 40.0%
!! CTTTTGCTGTAAGATCGGTT+GGG - chr4_2:63574560-63574579 Msa0614510:intron 40.0%
CAATTGCAATTTGGACAGTG+AGG - chr4_2:63574801-63574820 Msa0614510:intron 40.0%
CAAGAACAAAGTCTTGGTCA+AGG - chr4_2:63574895-63574914 Msa0614510:CDS 40.0%
AACAAATTGAGCCATCATGG+TGG + chr4_2:63574959-63574978 None:intergenic 40.0%
ATAGTGGCACTATAGTGTAG+CGG - chr4_2:63575053-63575072 Msa0614510:intron 40.0%
CTCTAGATCATTAATTGCCG+TGG - chr4_2:63575335-63575354 Msa0614510:intron 40.0%
CTTATGTATCTTCGAGTCCA+TGG - chr4_2:63575408-63575427 Msa0614510:intron 40.0%
GGATGAAACAATAAAGCCCA+TGG + chr4_2:63575428-63575447 None:intergenic 40.0%
ACTAACAGGAAACAGCAGAA+TGG + chr4_2:63575769-63575788 None:intergenic 40.0%
GTCATGAGTTCATGACTAAC+AGG + chr4_2:63575783-63575802 None:intergenic 40.0%
CAACATATTTCCCTTCTGGA+TGG + chr4_2:63575905-63575924 None:intergenic 40.0%
! TCCAAGCAAAGTTGATCCAT+TGG - chr4_2:63576016-63576035 Msa0614510:intron 40.0%
ACCAATGGATCAACTTTGCT+TGG + chr4_2:63576020-63576039 None:intergenic 40.0%
CCAAGACTTTCAAAAAGCTC+AGG + chr4_2:63576257-63576276 None:intergenic 40.0%
!! CCTGAGCTTTTTGAAAGTCT+TGG - chr4_2:63576254-63576273 Msa0614510:CDS 40.0%
! AATGTTTTTCCTGTACCAGG+TGG + chr4_2:63576410-63576429 None:intergenic 40.0%
! CAGGAAAAACATTGTTGGCT+AGG - chr4_2:63576417-63576436 Msa0614510:intron 40.0%
!! CATTGGAGAAGGTTCTAGAA+TGG - chr4_2:63576505-63576524 Msa0614510:intron 40.0%
!! GAGAAGGTTCTAGAATGGTT+AGG - chr4_2:63576510-63576529 Msa0614510:intron 40.0%
TTTAGGTAAGAGGTCAAACC+TGG + chr4_2:63576552-63576571 None:intergenic 40.0%
ATGGAGTAGGTTTAGGTAAG+AGG + chr4_2:63576562-63576581 None:intergenic 40.0%
CGACACATAATGAATGGAGT+AGG + chr4_2:63576575-63576594 None:intergenic 40.0%
! TGACGTTTTCTTGACTTCCA+TGG - chr4_2:63576622-63576641 Msa0614510:intron 40.0%
! CTTGACTTCCATGGCTTTTA+TGG - chr4_2:63576631-63576650 Msa0614510:intron 40.0%
ATCTTCGACCATAAAAGCCA+TGG + chr4_2:63576642-63576661 None:intergenic 40.0%
GGCACAAGTAAACTCAACTT+AGG - chr4_2:63576672-63576691 Msa0614510:intron 40.0%
! TCTTTTCGAAGGTCAGTTAG+TGG + chr4_2:63576783-63576802 None:intergenic 40.0%
GACCTTCGAAAAGACAACAA+TGG - chr4_2:63576789-63576808 Msa0614510:intron 40.0%
! CAACACTACTCCTTTTCACA+GGG - chr4_2:63576916-63576935 Msa0614510:intron 40.0%
AAGCTTCAAATCCATCCAAC+TGG + chr4_2:63577060-63577079 None:intergenic 40.0%
ATCCAGGATATCAATCCGAT+TGG + chr4_2:63577295-63577314 None:intergenic 40.0%
! GCAATCACTTTGTTTGATGG+GGG - chr4_2:63577781-63577800 Msa0614510:intron 40.0%
! CAATCACTTTGTTTGATGGG+GGG - chr4_2:63577782-63577801 Msa0614510:intron 40.0%
TTGATTGGATTGTTGGGTAG+TGG - chr4_2:63578108-63578127 Msa0614510:intron 40.0%
!! GGTAGTGGAGAACTAAACAT+GGG - chr4_2:63578123-63578142 Msa0614510:intron 40.0%
! GTGGGTTACTAGTTACAGTT+TGG - chr4_2:63578145-63578164 Msa0614510:intron 40.0%
!! CTAGTTACAGTTTGGTCTTG+CGG - chr4_2:63578153-63578172 Msa0614510:intron 40.0%
!! TAGTTACAGTTTGGTCTTGC+GGG - chr4_2:63578154-63578173 Msa0614510:intron 40.0%
TTGTCGTCTGGATCAAAGTT+TGG - chr4_2:63578237-63578256 Msa0614510:intron 40.0%
TGTCGTCTGGATCAAAGTTT+GGG - chr4_2:63578238-63578257 Msa0614510:intron 40.0%
CCGAGAAAAACATGTCATTG+AGG - chr4_2:63578605-63578624 Msa0614510:CDS 40.0%
ACATGTCATTGAGGAAGTTG+TGG - chr4_2:63578614-63578633 Msa0614510:CDS 40.0%
!!! GTTGGGAGGGTATTCGATTT+TGG + chr4_2:63573310-63573329 None:intergenic 45.0%
!! TGAAGTTGGTGATGTTGGGA+GGG + chr4_2:63573323-63573342 None:intergenic 45.0%
!! GATGGTGAAGTTGGTGATGT+TGG + chr4_2:63573328-63573347 None:intergenic 45.0%
ATGCTTCACTTCTACTCCGA+CGG + chr4_2:63573575-63573594 None:intergenic 45.0%
TCTGCCAAACCAACCAAACA+AGG - chr4_2:63573622-63573641 Msa0614510:CDS 45.0%
CTGCCAAACCAACCAAACAA+GGG - chr4_2:63573623-63573642 Msa0614510:CDS 45.0%
TGCCAAACCAACCAAACAAG+GGG - chr4_2:63573624-63573643 Msa0614510:CDS 45.0%
AAACCAACCAAACAAGGGGA+GGG - chr4_2:63573628-63573647 Msa0614510:CDS 45.0%
CGTAACGAGCTCAATTCTAG+GGG - chr4_2:63573739-63573758 Msa0614510:intron 45.0%
GGTGATACAAATCAACCCAG+AGG + chr4_2:63573937-63573956 None:intergenic 45.0%
!! TCACCCTTTGGGGTTATCTA+AGG - chr4_2:63573952-63573971 Msa0614510:intron 45.0%
GACACCTTAGATAACCCCAA+AGG + chr4_2:63573959-63573978 None:intergenic 45.0%
!! GTTATCTAAGGTGTCGCAGA+TGG - chr4_2:63573964-63573983 Msa0614510:intron 45.0%
CTGGTTGGGTTTGGGTAATA+TGG - chr4_2:63574052-63574071 Msa0614510:intron 45.0%
!! AGTGAAGGTGATTTGGTCAC+TGG - chr4_2:63574131-63574150 Msa0614510:intron 45.0%
TTTGGACAGTGAGGATGCTT+CGG - chr4_2:63574810-63574829 Msa0614510:intron 45.0%
ACTTCGCCAACATAAGAACC+AGG + chr4_2:63574860-63574879 None:intergenic 45.0%
TGGCGAAGTCGTTAAAGTGA+TGG - chr4_2:63574871-63574890 Msa0614510:CDS 45.0%
GGCGAAGTCGTTAAAGTGAT+GGG - chr4_2:63574872-63574891 Msa0614510:CDS 45.0%
GATGGGCAAGAACAAAGTCT+TGG - chr4_2:63574889-63574908 Msa0614510:CDS 45.0%
CACTATAGTGTAGCGGCATT+TGG - chr4_2:63575060-63575079 Msa0614510:intron 45.0%
TTGTCCAATAGCCGCTATAG+TGG - chr4_2:63575126-63575145 Msa0614510:CDS 45.0%
! GCTATAGCACTTTTGCGTAG+CGG - chr4_2:63575150-63575169 Msa0614510:CDS 45.0%
! CGTAGCGGAATTTCAGCAAT+CGG - chr4_2:63575165-63575184 Msa0614510:CDS 45.0%
!! ACAGAATCTTGGTTGGCCTA+TGG - chr4_2:63575703-63575722 Msa0614510:CDS 45.0%
GGAAACTCAGTCCTTTGTCT+AGG + chr4_2:63575865-63575884 None:intergenic 45.0%
TTTCTTCAGGTCCATCCAGA+AGG - chr4_2:63575891-63575910 Msa0614510:intron 45.0%
TTCTTCAGGTCCATCCAGAA+GGG - chr4_2:63575892-63575911 Msa0614510:intron 45.0%
CGAAGAGCAACTCTAGTAGA+TGG + chr4_2:63575966-63575985 None:intergenic 45.0%
TCTTGGAATAGCTCAACCGA+AGG - chr4_2:63576271-63576290 Msa0614510:CDS 45.0%
! TGTACATTCATCAGGGTGTC+TGG - chr4_2:63576461-63576480 Msa0614510:intron 45.0%
!! GGGAACTTTTTGTTATGGCC+AGG - chr4_2:63576531-63576550 Msa0614510:intron 45.0%
! GCCCATTGTTGTCTTTTCGA+AGG + chr4_2:63576794-63576813 None:intergenic 45.0%
! GCAACACTACTCCTTTTCAC+AGG - chr4_2:63576915-63576934 Msa0614510:intron 45.0%
! CAGTATTGGATCTGCTCGTA+TGG - chr4_2:63576976-63576995 Msa0614510:intron 45.0%
GATCTGCTCGTATGGAATCT+GGG - chr4_2:63576984-63577003 Msa0614510:intron 45.0%
GAACTTCTCAACCAGTTGGA+TGG - chr4_2:63577046-63577065 Msa0614510:intron 45.0%
!! AGGTTTTGATGGCCACCAAT+CGG - chr4_2:63577277-63577296 Msa0614510:intron 45.0%
CAGGATATCAATCCGATTGG+TGG + chr4_2:63577292-63577311 None:intergenic 45.0%
CACCAATCGGATTGATATCC+TGG - chr4_2:63577290-63577309 Msa0614510:CDS 45.0%
! GAGAAGATGAATGGAGCATC+TGG - chr4_2:63577568-63577587 Msa0614510:intron 45.0%
GATGATAATAGAGCAGCAGG+AGG + chr4_2:63577640-63577659 None:intergenic 45.0%
!! CGGCCTTGTTGAAGCAATTA+AGG - chr4_2:63577674-63577693 Msa0614510:intron 45.0%
! ACTTTGTTTGATGGGGGGTA+AGG - chr4_2:63577787-63577806 Msa0614510:intron 45.0%
AACGGAGAACTAAACATGGG+TGG - chr4_2:63578074-63578093 Msa0614510:intron 45.0%
ACGGAGAACTAAACATGGGT+GGG - chr4_2:63578075-63578094 Msa0614510:intron 45.0%
!! GGGTAGTGGAGAACTAAACA+TGG - chr4_2:63578122-63578141 Msa0614510:intron 45.0%
AGTGGAGAACTAAACATGGG+TGG - chr4_2:63578126-63578145 Msa0614510:intron 45.0%
GTGGAGAACTAAACATGGGT+GGG - chr4_2:63578127-63578146 Msa0614510:intron 45.0%
!! AGTTACAGTTTGGTCTTGCG+GGG - chr4_2:63578155-63578174 Msa0614510:intron 45.0%
ATTTGGCAAACGTTGTCGTC+TGG - chr4_2:63578225-63578244 Msa0614510:intron 45.0%
!! GAATGTTTGCTCTGAGAGAG+AGG - chr4_2:63578521-63578540 Msa0614510:CDS 45.0%
!! GACACAGGAGGATTTTGAGA+TGG - chr4_2:63578555-63578574 Msa0614510:CDS 45.0%
CTTCTTCATCACCTTTGCCA+CGG + chr4_2:63578581-63578600 None:intergenic 45.0%
! CATGAACTGAAAGTGCGGTA+AGG + chr4_2:63578701-63578720 None:intergenic 45.0%
CTTACCGCACTTTCAGTTCA+TGG - chr4_2:63578699-63578718 Msa0614510:intron 45.0%
GTGACCATGAACTGAAAGTG+CGG + chr4_2:63578706-63578725 None:intergenic 45.0%
CTTTCAGTTCATGGTCACTC+TGG - chr4_2:63578708-63578727 Msa0614510:intron 45.0%
!! GTGAAGTTGGTGATGTTGGG+AGG + chr4_2:63573324-63573343 None:intergenic 50.0%
TTCTTCTTCTTCGGACGCGA+TGG + chr4_2:63573346-63573365 None:intergenic 50.0%
ATCTGATCTATGGCTGCCGT+CGG - chr4_2:63573556-63573575 Msa0614510:exon 50.0%
AGTAGAAGTGAAGCATGCCG+AGG - chr4_2:63573579-63573598 Msa0614510:CDS 50.0%
GTAGAAGTGAAGCATGCCGA+GGG - chr4_2:63573580-63573599 Msa0614510:CDS 50.0%
! CTCCCCTTGTTTGGTTGGTT+TGG + chr4_2:63573629-63573648 None:intergenic 50.0%
CAAACCAACCAAACAAGGGG+AGG - chr4_2:63573627-63573646 Msa0614510:CDS 50.0%
TAGAGGACATTGTGGCTGAG+AGG - chr4_2:63574029-63574048 Msa0614510:intron 50.0%
! GGGTTTGGGTCTTTCTAGCA+CGG - chr4_2:63574175-63574194 Msa0614510:intron 50.0%
! GGTTTGGGTCTTTCTAGCAC+GGG - chr4_2:63574176-63574195 Msa0614510:intron 50.0%
! GTTTGGGTCTTTCTAGCACG+GGG - chr4_2:63574177-63574196 Msa0614510:intron 50.0%
TTGGACAGTGAGGATGCTTC+GGG - chr4_2:63574811-63574830 Msa0614510:intron 50.0%
GGAAGAACTGCAGCTTCTTC+AGG - chr4_2:63574832-63574851 Msa0614510:CDS 50.0%
! CAGGAGCCTGGTTCTTATGT+TGG - chr4_2:63574851-63574870 Msa0614510:CDS 50.0%
CTTGATCCACTCCACCATGA+TGG - chr4_2:63574945-63574964 Msa0614510:intron 50.0%
! ATTGAGCCATCATGGTGGAG+TGG + chr4_2:63574954-63574973 None:intergenic 50.0%
GTGCTATAGCGCCACTATAG+CGG + chr4_2:63575140-63575159 None:intergenic 50.0%
CCATGTATGCTGACAGAGGA+TGG + chr4_2:63576326-63576345 None:intergenic 50.0%
CCATCCTCTGTCAGCATACA+TGG - chr4_2:63576323-63576342 Msa0614510:intron 50.0%
ACAGCCATGTATGCTGACAG+AGG + chr4_2:63576330-63576349 None:intergenic 50.0%
! TCACAGGGTGTCTTGCTCTA+TGG - chr4_2:63576383-63576402 Msa0614510:intron 50.0%
! CACAGGGTGTCTTGCTCTAT+GGG - chr4_2:63576384-63576403 Msa0614510:intron 50.0%
! AACATTGTTGGCTAGGGCAG+TGG - chr4_2:63576424-63576443 Msa0614510:intron 50.0%
GGATCTGCTCGTATGGAATC+TGG - chr4_2:63576983-63577002 Msa0614510:intron 50.0%
ATGGAATCTGGGAGTGGCAA+TGG - chr4_2:63576995-63577014 Msa0614510:intron 50.0%
TGAAGTGCAGCGTACTATGC+TGG - chr4_2:63577024-63577043 Msa0614510:intron 50.0%
GCTGGAACTTCTCAACCAGT+TGG - chr4_2:63577042-63577061 Msa0614510:intron 50.0%
ATCTTCCTGTCAATCCGTCC+AGG + chr4_2:63577333-63577352 None:intergenic 50.0%
! AGCATCTGGTGCTGAGCTTA+AGG - chr4_2:63577582-63577601 Msa0614510:intron 50.0%
CAGGTCATGAGGCGAAACAA+AGG - chr4_2:63577895-63577914 Msa0614510:intron 50.0%
TTCATAGTGGTGAGGGTGAC+TGG - chr4_2:63578199-63578218 Msa0614510:intron 50.0%
TCATAGTGGTGAGGGTGACT+GGG - chr4_2:63578200-63578219 Msa0614510:intron 50.0%
!! TGTTTGCTCTGAGAGAGAGG+AGG - chr4_2:63578524-63578543 Msa0614510:CDS 50.0%
!! GTTTGCTCTGAGAGAGAGGA+GGG - chr4_2:63578525-63578544 Msa0614510:CDS 50.0%
!!! TTTTGAGATGGCCGTGGCAA+AGG - chr4_2:63578567-63578586 Msa0614510:CDS 50.0%
CGTGGCAAAGGTGATGAAGA+AGG - chr4_2:63578579-63578598 Msa0614510:CDS 50.0%
TTCGGACGCGATGGTGAAGT+TGG + chr4_2:63573337-63573356 None:intergenic 55.0%
TTGGCAGAGCAATGCTCCTC+CGG + chr4_2:63573610-63573629 None:intergenic 55.0%
! AGACCCTCCCCTTGTTTGGT+TGG + chr4_2:63573634-63573653 None:intergenic 55.0%
GGTGAAGGAGCTGAAGCTCA+TGG + chr4_2:63573681-63573700 None:intergenic 55.0%
ATTGTGGCTGAGAGGCTGGT+TGG - chr4_2:63574037-63574056 Msa0614510:intron 55.0%
! TTGTGGCTGAGAGGCTGGTT+GGG - chr4_2:63574038-63574057 Msa0614510:intron 55.0%
! CTGAGAGGCTGGTTGGGTTT+GGG - chr4_2:63574044-63574063 Msa0614510:intron 55.0%
! GTCTTTCTAGCACGGGGAGT+CGG - chr4_2:63574183-63574202 Msa0614510:intron 55.0%
AGCGCCACTATAGCGGCTAT+TGG + chr4_2:63575133-63575152 None:intergenic 55.0%
GGAGCATGCTCCCTGTGAAA+AGG + chr4_2:63576929-63576948 None:intergenic 55.0%
GCTCGTATGGAATCTGGGAG+TGG - chr4_2:63576989-63577008 Msa0614510:intron 55.0%
!! GTCTCAGGAGTGCTTGATCC+AGG + chr4_2:63577311-63577330 None:intergenic 55.0%
GATCAAGCACTCCTGAGACC+TGG - chr4_2:63577312-63577331 Msa0614510:CDS 55.0%
AAGCACTCCTGAGACCTGGA+CGG - chr4_2:63577316-63577335 Msa0614510:CDS 55.0%
TGTCAATCCGTCCAGGTCTC+AGG + chr4_2:63577326-63577345 None:intergenic 55.0%
!! TGAGACCTGGACGGATTGAC+AGG - chr4_2:63577325-63577344 Msa0614510:CDS 55.0%
GTGAGGGTGACTGGGTCATT+TGG - chr4_2:63578208-63578227 Msa0614510:intron 55.0%
TAGGCTGTGTGCACTGAAGC+TGG - chr4_2:63578499-63578518 Msa0614510:CDS 55.0%
!!! GGAGGATTTTGAGATGGCCG+TGG - chr4_2:63578561-63578580 Msa0614510:CDS 55.0%
ACGGAGACCCTCCCCTTGTT+TGG + chr4_2:63573638-63573657 None:intergenic 60.0%
CGTTACGTTGCGCCTCGAGA+CGG + chr4_2:63573726-63573745 None:intergenic 60.0%
GGACATTGTGGCTGAGAGGC+TGG - chr4_2:63574033-63574052 Msa0614510:intron 60.0%
! GCTGAGAGGCTGGTTGGGTT+TGG - chr4_2:63574043-63574062 Msa0614510:intron 60.0%
CTGCAGCTTCTTCAGGAGCC+TGG - chr4_2:63574839-63574858 Msa0614510:CDS 60.0%
GTCTTGCTCTATGGGCCACC+TGG - chr4_2:63576392-63576411 Msa0614510:intron 60.0%
CTCTATGGGCCACCTGGTAC+AGG - chr4_2:63576398-63576417 Msa0614510:intron 60.0%
! GAGGAGGGTACACGTGACAC+AGG - chr4_2:63578540-63578559 Msa0614510:CDS 60.0%
! GAGGGTACACGTGACACAGG+AGG - chr4_2:63578543-63578562 Msa0614510:CDS 60.0%
! GAAGCATGCCGAGGGTGCAC+CGG - chr4_2:63573588-63573607 Msa0614510:CDS 65.0%
ATGCTCCTCCGGTGCACCCT+CGG + chr4_2:63573599-63573618 None:intergenic 65.0%
! GCATGCCGAGGGTGCACCGG+AGG - chr4_2:63573591-63573610 Msa0614510:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 63573279 63578921 63573279 ID=Msa0614510;Name=Msa0614510
chr4_2 mRNA 63573279 63578921 63573279 ID=Msa0614510-mRNA-1;Parent=Msa0614510;Name=Msa0614510-mRNA-1;_AED=0.09;_eAED=0.09;_QI=144|0.88|0.9|1|0.77|0.7|10|279|437
chr4_2 exon 63573279 63573698 63573279 ID=Msa0614510-mRNA-1:exon:17755;Parent=Msa0614510-mRNA-1
chr4_2 exon 63574597 63574707 63574597 ID=Msa0614510-mRNA-1:exon:17754;Parent=Msa0614510-mRNA-1
chr4_2 exon 63574823 63574921 63574823 ID=Msa0614510-mRNA-1:exon:17753;Parent=Msa0614510-mRNA-1
chr4_2 exon 63575107 63575323 63575107 ID=Msa0614510-mRNA-1:exon:17752;Parent=Msa0614510-mRNA-1
chr4_2 exon 63575648 63575811 63575648 ID=Msa0614510-mRNA-1:exon:17751;Parent=Msa0614510-mRNA-1
chr4_2 exon 63575908 63575970 63575908 ID=Msa0614510-mRNA-1:exon:17750;Parent=Msa0614510-mRNA-1
chr4_2 exon 63576076 63576300 63576076 ID=Msa0614510-mRNA-1:exon:17749;Parent=Msa0614510-mRNA-1
chr4_2 exon 63577284 63577381 63577284 ID=Msa0614510-mRNA-1:exon:17748;Parent=Msa0614510-mRNA-1
chr4_2 exon 63578440 63578657 63578440 ID=Msa0614510-mRNA-1:exon:17747;Parent=Msa0614510-mRNA-1
chr4_2 exon 63578800 63578921 63578800 ID=Msa0614510-mRNA-1:exon:17746;Parent=Msa0614510-mRNA-1
chr4_2 five_prime_UTR 63578800 63578921 63578800 ID=Msa0614510-mRNA-1:five_prime_utr;Parent=Msa0614510-mRNA-1
chr4_2 five_prime_UTR 63578636 63578657 63578636 ID=Msa0614510-mRNA-1:five_prime_utr;Parent=Msa0614510-mRNA-1
chr4_2 CDS 63578440 63578635 63578440 ID=Msa0614510-mRNA-1:cds;Parent=Msa0614510-mRNA-1
chr4_2 CDS 63577284 63577381 63577284 ID=Msa0614510-mRNA-1:cds;Parent=Msa0614510-mRNA-1
chr4_2 CDS 63576076 63576300 63576076 ID=Msa0614510-mRNA-1:cds;Parent=Msa0614510-mRNA-1
chr4_2 CDS 63575908 63575970 63575908 ID=Msa0614510-mRNA-1:cds;Parent=Msa0614510-mRNA-1
chr4_2 CDS 63575648 63575811 63575648 ID=Msa0614510-mRNA-1:cds;Parent=Msa0614510-mRNA-1
chr4_2 CDS 63575107 63575323 63575107 ID=Msa0614510-mRNA-1:cds;Parent=Msa0614510-mRNA-1
chr4_2 CDS 63574823 63574921 63574823 ID=Msa0614510-mRNA-1:cds;Parent=Msa0614510-mRNA-1
chr4_2 CDS 63574597 63574707 63574597 ID=Msa0614510-mRNA-1:cds;Parent=Msa0614510-mRNA-1
chr4_2 CDS 63573558 63573698 63573558 ID=Msa0614510-mRNA-1:cds;Parent=Msa0614510-mRNA-1
chr4_2 three_prime_UTR 63573279 63573557 63573279 ID=Msa0614510-mRNA-1:three_prime_utr;Parent=Msa0614510-mRNA-1
Gene Sequence

>Msa0614510

ATGGCTGCCGTCGGAGTAGAAGTGAAGCATGCCGAGGGTGCACCGGAGGAGCATTGCTCTGCCAAACCAACCAAACAAGGGGAGGGTCTCCGTCAATACTATACTCAGCACATCCATGAGCTTCAGCTCCTTCACCGTCAAAAGAATCATAATCTTAACCGTCTCGAGGCGCAACGTAACGAGCTCAATTCTAGGGTGAGGATGCTTCGGGAAGAACTGCAGCTTCTTCAGGAGCCTGGTTCTTATGTTGGCGAAGTCGTTAAAGTGATGGGCAAGAACAAAGTCTTGGTCAAGGTCCATCCAGAAGGGAAATATGTTGTTGATATTGATAAAAATATTGACATCACAAAGATTACACCATCTACTAGAGTTGCTCTTCGCAACGACAGTTATGTGCTTCATTTAGTTCTTCCAAGCAAAGTTGATCCATTGGTTAATCTGATGAAAGTTGAGAAAGTTCCTGATTCTACATATGACATGATTGGTGGTTTAGACCAACAAATCAAAGAAATAAAAGAGGTCATTGAGCTTCCAATTAAACATCCTGAGCTTTTTGAAAGTCTTGGAATAGCTCAACCGAAGGGTGTCTTGCTCTATGGGCCACCTGGTACAGGAAAAACATTGTTGGCTAGGGCAGTGGCACATCATACTGATTGTACATTCATCAGGGTGTCTGGTTCTGAACTTGTTCAGAAATACATTGGAGAAGGTTCTAGAATGGTTAGGGAACTTTTTGTTATGGCCAGTAAATGTGTTCTGAGGACTTGCTTATCCAATATGATATGCAACACTACTCCTTTTCACAGGGAGCATGCTCCATCAATTATCTTCATGGACGAAATTGACAGTATTGGATCTGCTCGTATGGAATCTGGGAGTGGCAATGGTGATAGTGAAGTGCAGCGTACTATGCTGGAACTTCTCAACCAGTTGGATGGATTTGAAGCTTCCAATAAGATCAAGGTTTTGATGGCCACCAATCGGATTGATATCCTGGATCAAGCACTCCTGAGACCTGGACGGATTGACAGGAAGATTGAATTTCCAAATCCTAATGAAGAGTCTCGCCGAGATATCTTGAAAATCCATTCAAGAAGAATGAATTTAATGCGTGGTATTGACTTGAAGAAGATTGCTGAGAAGATGAATGGAGCATCTGGTGCTGAGCTTAAGGCTGTGTGCACTGAAGCTGGAATGTTTGCTCTGAGAGAGAGGAGGGTACACGTGACACAGGAGGATTTTGAGATGGCCGTGGCAAAGGTGATGAAGAAGGAGACCGAGAAAAACATGTCATTGAGGAAGTTGTGGAAGTGA
Protein sequence

>Msa0614510

MAAVGVEVKHAEGAPEEHCSAKPTKQGEGLRQYYTQHIHELQLLHRQKNHNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKNIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMASKCVLRTCLSNMICNTTPFHREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRRDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKETEKNMSLRKLWK*