Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188890 | XP_003593045.1 | 97.959 | 147 | 3 | 0 | 1 | 147 | 1 | 147 | 4.18e-97 | 286 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188890 | A2Q3U1 | 97.959 | 147 | 3 | 0 | 1 | 147 | 1 | 147 | 2.00e-97 | 286 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016670 | Msa0188890 | 0.826188 | 3.111751e-54 | -8.615850e-47 |
| Msa0023440 | Msa0188890 | 0.804622 | 1.977767e-49 | -8.615850e-47 |
| Msa0027260 | Msa0188890 | 0.804566 | 2.031124e-49 | -8.615850e-47 |
| Msa0031510 | Msa0188890 | 0.802789 | 4.748802e-49 | -8.615850e-47 |
| Msa0032370 | Msa0188890 | 0.808249 | 3.398255e-50 | -8.615850e-47 |
| Msa0048180 | Msa0188890 | 0.804307 | 2.300462e-49 | -8.615850e-47 |
| Msa0052610 | Msa0188890 | 0.854149 | 1.492165e-61 | -8.615850e-47 |
| Msa0052690 | Msa0188890 | 0.818756 | 1.659993e-52 | -8.615850e-47 |
| Msa0057610 | Msa0188890 | 0.820514 | 6.590670e-53 | -8.615850e-47 |
| Msa0057710 | Msa0188890 | 0.834275 | 3.292467e-56 | -8.615850e-47 |
| Msa0067870 | Msa0188890 | 0.835637 | 1.494087e-56 | -8.615850e-47 |
| Msa0073670 | Msa0188890 | 0.820992 | 5.114843e-53 | -8.615850e-47 |
| Msa0074320 | Msa0188890 | 0.812178 | 4.830660e-51 | -8.615850e-47 |
| Msa0076040 | Msa0188890 | 0.807105 | 5.946047e-50 | -8.615850e-47 |
| Msa0077680 | Msa0188890 | 0.820930 | 5.285863e-53 | -8.615850e-47 |
| Msa0094580 | Msa0188890 | 0.801368 | 9.304972e-49 | -8.615850e-47 |
| Msa0097850 | Msa0188890 | 0.853350 | 2.532204e-61 | -8.615850e-47 |
| Msa0103240 | Msa0188890 | 0.807686 | 4.477679e-50 | -8.615850e-47 |
| Msa0107250 | Msa0188890 | 0.802915 | 4.472712e-49 | -8.615850e-47 |
| Msa0107280 | Msa0188890 | 0.807260 | 5.512611e-50 | -8.615850e-47 |
| Msa0128860 | Msa0188890 | 0.819900 | 9.107310e-53 | -8.615850e-47 |
| Msa0167480 | Msa0188890 | 0.834078 | 3.690040e-56 | -8.615850e-47 |
| Msa0174730 | Msa0188890 | 0.817342 | 3.465463e-52 | -8.615850e-47 |
| Msa0181610 | Msa0188890 | 0.808388 | 3.173302e-50 | -8.615850e-47 |
| Msa0186890 | Msa0188890 | 0.819836 | 9.423279e-53 | -8.615850e-47 |
| Msa0187690 | Msa0188890 | 0.809271 | 2.054389e-50 | -8.615850e-47 |
| Msa0187930 | Msa0188890 | 0.823646 | 1.238167e-53 | -8.615850e-47 |
| Msa0188350 | Msa0188890 | 0.822923 | 1.826640e-53 | -8.615850e-47 |
| Msa0188890 | Msa0194540 | 0.825257 | 5.173962e-54 | -8.615850e-47 |
| Msa0188890 | Msa0199690 | 0.804621 | 1.978124e-49 | -8.615850e-47 |
| Msa0188890 | Msa0199880 | 0.813844 | 2.083419e-51 | -8.615850e-47 |
| Msa0188890 | Msa0219250 | -0.801653 | 8.134374e-49 | -8.615850e-47 |
| Msa0188890 | Msa0226330 | 0.818792 | 1.629565e-52 | -8.615850e-47 |
| Msa0188890 | Msa0226460 | 0.828275 | 9.840161e-55 | -8.615850e-47 |
| Msa0188890 | Msa0231100 | 0.830432 | 2.947063e-55 | -8.615850e-47 |
| Msa0188890 | Msa0231380 | 0.992408 | 4.128102e-193 | -8.615850e-47 |
| Msa0188890 | Msa0233730 | 0.801704 | 7.942825e-49 | -8.615850e-47 |
| Msa0188890 | Msa0236270 | 0.804905 | 1.725824e-49 | -8.615850e-47 |
| Msa0188890 | Msa0241800 | 0.819831 | 9.446235e-53 | -8.615850e-47 |
| Msa0188890 | Msa0242680 | 0.825195 | 5.351134e-54 | -8.615850e-47 |
| Msa0188890 | Msa0244780 | 0.817768 | 2.779037e-52 | -8.615850e-47 |
| Msa0188890 | Msa0254940 | 0.826272 | 2.970651e-54 | -8.615850e-47 |
| Msa0188890 | Msa0258880 | -0.801920 | 7.169883e-49 | -8.615850e-47 |
| Msa0188890 | Msa0259160 | 0.801563 | 8.487986e-49 | -8.615850e-47 |
| Msa0188890 | Msa0268130 | 0.813538 | 2.432911e-51 | -8.615850e-47 |
| Msa0188890 | Msa0270660 | 0.992383 | 5.837561e-193 | -8.615850e-47 |
| Msa0188890 | Msa0277450 | 0.830388 | 3.019892e-55 | -8.615850e-47 |
| Msa0188890 | Msa0280430 | 0.810911 | 9.106270e-51 | -8.615850e-47 |
| Msa0188890 | Msa0296250 | 0.819274 | 1.265621e-52 | -8.615850e-47 |
| Msa0188890 | Msa0298990 | 0.810852 | 9.382201e-51 | -8.615850e-47 |
| Msa0188890 | Msa0304590 | 0.819925 | 8.988534e-53 | -8.615850e-47 |
| Msa0188890 | Msa0304660 | 0.816391 | 5.664606e-52 | -8.615850e-47 |
| Msa0188890 | Msa0311370 | 0.802274 | 6.063606e-49 | -8.615850e-47 |
| Msa0188890 | Msa0317160 | 0.800596 | 1.337912e-48 | -8.615850e-47 |
| Msa0188890 | Msa0331700 | 0.816890 | 4.379163e-52 | -8.615850e-47 |
| Msa0188890 | Msa0337650 | 0.802963 | 4.371061e-49 | -8.615850e-47 |
| Msa0188890 | Msa0339640 | 0.800670 | 1.292592e-48 | -8.615850e-47 |
| Msa0188890 | Msa0365100 | 0.801248 | 9.845798e-49 | -8.615850e-47 |
| Msa0188890 | Msa0376040 | 0.811580 | 6.520141e-51 | -8.615850e-47 |
| Msa0188890 | Msa0392940 | 0.818272 | 2.137727e-52 | -8.615850e-47 |
| Msa0188890 | Msa0394400 | 0.805174 | 1.515933e-49 | -8.615850e-47 |
| Msa0188890 | Msa0402820 | 0.818171 | 2.253172e-52 | -8.615850e-47 |
| Msa0188890 | Msa0416400 | 0.811706 | 6.121663e-51 | -8.615850e-47 |
| Msa0188890 | Msa0423750 | 0.803097 | 4.102302e-49 | -8.615850e-47 |
| Msa0188890 | Msa0428240 | 0.807756 | 4.326327e-50 | -8.615850e-47 |
| Msa0188890 | Msa0429950 | 0.809112 | 2.222955e-50 | -8.615850e-47 |
| Msa0188890 | Msa0431770 | 0.813282 | 2.769104e-51 | -8.615850e-47 |
| Msa0188890 | Msa0508590 | 0.841014 | 6.143551e-58 | -8.615850e-47 |
| Msa0188890 | Msa0508630 | 0.821555 | 3.793785e-53 | -8.615850e-47 |
| Msa0188890 | Msa0516040 | 0.812314 | 4.511251e-51 | -8.615850e-47 |
| Msa0188890 | Msa0517840 | 0.822026 | 2.951799e-53 | -8.615850e-47 |
| Msa0188890 | Msa0519130 | 0.805197 | 1.499525e-49 | -8.615850e-47 |
| Msa0188890 | Msa0526540 | 0.846853 | 1.673438e-59 | -8.615850e-47 |
| Msa0188890 | Msa0527150 | 0.820349 | 7.187387e-53 | -8.615850e-47 |
| Msa0188890 | Msa0541860 | 0.820083 | 8.274049e-53 | -8.615850e-47 |
| Msa0188890 | Msa0555910 | 0.811183 | 7.951585e-51 | -8.615850e-47 |
| Msa0188890 | Msa0561430 | 0.806386 | 8.435647e-50 | -8.615850e-47 |
| Msa0188890 | Msa0571920 | 0.814483 | 1.505522e-51 | -8.615850e-47 |
| Msa0188890 | Msa0576940 | 0.840633 | 7.729576e-58 | -8.615850e-47 |
| Msa0188890 | Msa0581070 | 0.812046 | 5.161362e-51 | -8.615850e-47 |
| Msa0188890 | Msa0609450 | 0.809537 | 1.802002e-50 | -8.615850e-47 |
| Msa0188890 | Msa0616240 | 0.808439 | 3.095371e-50 | -8.615850e-47 |
| Msa0188890 | Msa0620990 | 0.815808 | 7.645528e-52 | -8.615850e-47 |
| Msa0188890 | Msa0654870 | 0.810678 | 1.022674e-50 | -8.615850e-47 |
| Msa0188890 | Msa0661710 | 0.805961 | 1.036887e-49 | -8.615850e-47 |
| Msa0188890 | Msa0666230 | 0.809983 | 1.444623e-50 | -8.615850e-47 |
| Msa0188890 | Msa0679700 | 0.806451 | 8.174852e-50 | -8.615850e-47 |
| Msa0188890 | Msa0690250 | 0.814969 | 1.174904e-51 | -8.615850e-47 |
| Msa0188890 | Msa0692080 | 0.816629 | 5.011995e-52 | -8.615850e-47 |
| Msa0188890 | Msa0699570 | 0.805364 | 1.383735e-49 | -8.615850e-47 |
| Msa0188890 | Msa0703230 | 0.819731 | 9.956010e-53 | -8.615850e-47 |
| Msa0188890 | Msa0703680 | 0.801848 | 7.418822e-49 | -8.615850e-47 |
| Msa0188890 | Msa0738040 | 0.801161 | 1.025959e-48 | -8.615850e-47 |
| Msa0188890 | Msa0765270 | 0.800672 | 1.291268e-48 | -8.615850e-47 |
| Msa0188890 | Msa0784380 | 0.817089 | 3.951320e-52 | -8.615850e-47 |
| Msa0188890 | Msa0788770 | 0.820755 | 5.801358e-53 | -8.615850e-47 |
| Msa0188890 | Msa0789650 | 0.803681 | 3.103757e-49 | -8.615850e-47 |
| Msa0188890 | Msa0790610 | 0.993607 | 6.371529e-201 | -8.615850e-47 |
| Msa0188890 | Msa0808800 | 0.800916 | 1.151175e-48 | -8.615850e-47 |
| Msa0188890 | Msa0818170 | 0.823318 | 1.477112e-53 | -8.615850e-47 |
| Msa0188890 | Msa0895790 | 0.804941 | 1.696337e-49 | -8.615850e-47 |
| Msa0188890 | Msa0927990 | 0.807215 | 5.637059e-50 | -8.615850e-47 |
| Msa0188890 | Msa0960830 | 0.837220 | 5.909868e-57 | -8.615850e-47 |
| Msa0188890 | Msa0977310 | 0.807887 | 4.058939e-50 | -8.615850e-47 |
| Msa0188890 | Msa1000930 | 0.824861 | 6.416963e-54 | -8.615850e-47 |
| Msa0188890 | Msa1004420 | 0.802275 | 6.059542e-49 | -8.615850e-47 |
| Msa0188890 | Msa1019240 | 0.813988 | 1.936465e-51 | -8.615850e-47 |
| Msa0188890 | Msa1019260 | 0.808367 | 3.206466e-50 | -8.615850e-47 |
| Msa0188890 | Msa1055010 | 0.802841 | 4.632770e-49 | -8.615850e-47 |
| Msa0188890 | Msa1066490 | 0.835725 | 1.419970e-56 | -8.615850e-47 |
| Msa0188890 | Msa1079230 | 0.824639 | 7.240013e-54 | -8.615850e-47 |
| Msa0188890 | Msa1082700 | 0.805361 | 1.385418e-49 | -8.615850e-47 |
| Msa0188890 | Msa1094420 | 0.819030 | 1.438116e-52 | -8.615850e-47 |
| Msa0188890 | Msa1104210 | 0.816541 | 5.243430e-52 | -8.615850e-47 |
| Msa0188890 | Msa1117550 | 0.804414 | 2.185166e-49 | -8.615850e-47 |
| Msa0188890 | Msa1124110 | 0.807315 | 5.366872e-50 | -8.615850e-47 |
| Msa0188890 | Msa1126510 | 0.805483 | 1.306469e-49 | -8.615850e-47 |
| Msa0188890 | Msa1126770 | 0.804088 | 2.554921e-49 | -8.615850e-47 |
| Msa0188890 | Msa1131170 | 0.823208 | 1.567928e-53 | -8.615850e-47 |
| Msa0188890 | Msa1131560 | 0.808843 | 2.537174e-50 | -8.615850e-47 |
| Msa0188890 | Msa1134110 | 0.841791 | 3.835617e-58 | -8.615850e-47 |
| Msa0188890 | Msa1155520 | 0.818555 | 1.844299e-52 | -8.615850e-47 |
| Msa0188890 | Msa1166870 | 0.819268 | 1.269960e-52 | -8.615850e-47 |
| Msa0188890 | Msa1168950 | 0.817786 | 2.753010e-52 | -8.615850e-47 |
| Msa0188890 | Msa1169040 | 0.820970 | 5.175610e-53 | -8.615850e-47 |
| Msa0188890 | Msa1173300 | 0.813704 | 2.236722e-51 | -8.615850e-47 |
| Msa0188890 | Msa1181850 | 0.816034 | 6.809652e-52 | -8.615850e-47 |
| Msa0188890 | Msa1181860 | 0.817804 | 2.726309e-52 | -8.615850e-47 |
| Msa0188890 | Msa1183660 | 0.804945 | 1.692669e-49 | -8.615850e-47 |
| Msa0188890 | Msa1184370 | 0.801349 | 9.388795e-49 | -8.615850e-47 |
| Msa0188890 | Msa1202580 | 0.814781 | 1.293748e-51 | -8.615850e-47 |
| Msa0188890 | Msa1227690 | 0.809603 | 1.744054e-50 | -8.615850e-47 |
| Msa0188890 | Msa1230580 | 0.809569 | 1.773319e-50 | -8.615850e-47 |
| Msa0188890 | Msa1253810 | 0.805252 | 1.460284e-49 | -8.615850e-47 |
| Msa0188890 | Msa1256470 | 0.801663 | 8.095753e-49 | -8.615850e-47 |
| Msa0188890 | Msa1295110 | 0.818987 | 1.471474e-52 | -8.615850e-47 |
| Msa0188890 | Msa1307600 | 0.806498 | 7.988916e-50 | -8.615850e-47 |
| Msa0188890 | Msa1359270 | 0.813648 | 2.301393e-51 | -8.615850e-47 |
| Msa0188890 | Msa1363330 | 0.844652 | 6.619913e-59 | -8.615850e-47 |
| Msa0188890 | Msa1379760 | 0.822860 | 1.889664e-53 | -8.615850e-47 |
| Msa0188890 | Msa1386600 | 0.844184 | 8.847669e-59 | -8.615850e-47 |
| Msa0188890 | Msa1386710 | 0.826423 | 2.734941e-54 | -8.615850e-47 |
| Msa0188890 | Msa1406040 | 0.812722 | 3.674322e-51 | -8.615850e-47 |
| Msa0188890 | Msa1442850 | 0.812057 | 5.133702e-51 | -8.615850e-47 |
| Msa0188890 | Msa1448690 | 0.805054 | 1.606448e-49 | -8.615850e-47 |
| Msa0188890 | Msa1450280 | 0.825968 | 3.510049e-54 | -8.615850e-47 |
| Msa0188890 | Msa1461490 | 0.823742 | 1.175745e-53 | -8.615850e-47 |
| Msa0188890 | Msa1465680 | 0.803935 | 2.748929e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188890 | MtrunA17_Chr2g0277971 | 97.959 | 147 | 3 | 0 | 1 | 147 | 1 | 147 | 3.84e-101 | 286 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0188890 | AT1G60870.1 | 59.184 | 147 | 60 | 0 | 1 | 147 | 1 | 147 | 1.64e-33 | 115 |
Find 26 sgRNAs with CRISPR-Local
Find 25 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTGAGAAAGCAAGAAATA+TGG | 0.282094 | 2_1:+4099669 | Msa0188890:CDS |
| GCTTGGAAAGGAATTTCTTC+TGG | 0.317736 | 2_1:+4099778 | Msa0188890:CDS |
| AGCAGCTGCCCATGCTTTGT+AGG | 0.349595 | 2_1:-4099485 | None:intergenic |
| AAGAAATATGGGAAACTTGA+TGG | 0.389367 | 2_1:+4099681 | Msa0188890:CDS |
| GTGCCATGGATGAATTTAGA+AGG | 0.394252 | 2_1:+4099590 | Msa0188890:CDS |
| GGAATATCTCGACTCGGCTA+TGG | 0.422650 | 2_1:+4099564 | Msa0188890:CDS |
| GAGGATTTCAAGAGATGAAG+TGG | 0.462068 | 2_1:+4099630 | Msa0188890:CDS |
| GCTGAGAAAGCAAGAAATAT+GGG | 0.463308 | 2_1:+4099670 | Msa0188890:CDS |
| ATAAGATCTTCGATCGTCGA+TGG | 0.506443 | 2_1:-4099442 | None:intergenic |
| GAAAGGAATTTCTTCTGGCA+AGG | 0.513277 | 2_1:+4099783 | Msa0188890:CDS |
| AGATAGAATCCTACAAAGCA+TGG | 0.513381 | 2_1:+4099476 | Msa0188890:CDS |
| AAAGGAAGGTGAACTGAGAA+AGG | 0.516993 | 2_1:-4099387 | None:intergenic |
| CTGCTTCTATGAAATCTGCT+TGG | 0.529588 | 2_1:+4099761 | Msa0188890:CDS |
| GGTTTGAAGAAGAACTTGAG+AGG | 0.547329 | 2_1:+4099611 | Msa0188890:CDS |
| AAACCTTCTAAATTCATCCA+TGG | 0.552800 | 2_1:-4099593 | None:intergenic |
| TAAAGATTGATCTGAAAGGA+AGG | 0.570141 | 2_1:-4099401 | None:intergenic |
| AAAGTATATATGTATCAAGA+TGG | 0.576287 | 2_1:-4099811 | None:intergenic |
| CTCGGCTATGGAAAGTGCCA+TGG | 0.577831 | 2_1:+4099576 | Msa0188890:CDS |
| TCTATGAAATCTGCTTGGAA+AGG | 0.578134 | 2_1:+4099766 | Msa0188890:CDS |
| CATGTAAAGATTGATCTGAA+AGG | 0.594535 | 2_1:-4099405 | None:intergenic |
| AGCCGAGTCGAGATATTCCT+CGG | 0.604035 | 2_1:-4099560 | None:intergenic |
| TGAACTTGAGCAAGAAAGAG+AGG | 0.624850 | 2_1:+4099507 | Msa0188890:CDS |
| AGCCGAGGAATATCTCGACT+CGG | 0.631008 | 2_1:+4099558 | Msa0188890:CDS |
| GATAGAATCCTACAAAGCAT+GGG | 0.638623 | 2_1:+4099477 | Msa0188890:CDS |
| AGATGCAATGCAAGAAGCCG+AGG | 0.640190 | 2_1:+4099543 | Msa0188890:CDS |
| ACTTGAGCAAGAAAGAGAGG+TGG | 0.641638 | 2_1:+4099510 | Msa0188890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TAAAGATTGATCTGAAAGGA+AGG | - | chr2_1:4099404-4099423 | None:intergenic | 30.0% | |
| CATGTAAAGATTGATCTGAA+AGG | - | chr2_1:4099408-4099427 | None:intergenic | 30.0% | |
| AAACCTTCTAAATTCATCCA+TGG | - | chr2_1:4099596-4099615 | None:intergenic | 30.0% | |
| AAGAAATATGGGAAACTTGA+TGG | + | chr2_1:4099681-4099700 | Msa0188890:CDS | 30.0% | |
| AGATAGAATCCTACAAAGCA+TGG | + | chr2_1:4099476-4099495 | Msa0188890:CDS | 35.0% | |
| GATAGAATCCTACAAAGCAT+GGG | + | chr2_1:4099477-4099496 | Msa0188890:CDS | 35.0% | |
| AGCTGAGAAAGCAAGAAATA+TGG | + | chr2_1:4099669-4099688 | Msa0188890:CDS | 35.0% | |
| GCTGAGAAAGCAAGAAATAT+GGG | + | chr2_1:4099670-4099689 | Msa0188890:CDS | 35.0% | |
| TCTATGAAATCTGCTTGGAA+AGG | + | chr2_1:4099766-4099785 | Msa0188890:CDS | 35.0% | |
| AAAGGAAGGTGAACTGAGAA+AGG | - | chr2_1:4099390-4099409 | None:intergenic | 40.0% | |
| ATAAGATCTTCGATCGTCGA+TGG | - | chr2_1:4099445-4099464 | None:intergenic | 40.0% | |
| TGAACTTGAGCAAGAAAGAG+AGG | + | chr2_1:4099507-4099526 | Msa0188890:CDS | 40.0% | |
| GTGCCATGGATGAATTTAGA+AGG | + | chr2_1:4099590-4099609 | Msa0188890:CDS | 40.0% | |
| GGTTTGAAGAAGAACTTGAG+AGG | + | chr2_1:4099611-4099630 | Msa0188890:CDS | 40.0% | |
| GAGGATTTCAAGAGATGAAG+TGG | + | chr2_1:4099630-4099649 | Msa0188890:CDS | 40.0% | |
| CTGCTTCTATGAAATCTGCT+TGG | + | chr2_1:4099761-4099780 | Msa0188890:CDS | 40.0% | |
| GCTTGGAAAGGAATTTCTTC+TGG | + | chr2_1:4099778-4099797 | Msa0188890:CDS | 40.0% | |
| GAAAGGAATTTCTTCTGGCA+AGG | + | chr2_1:4099783-4099802 | Msa0188890:CDS | 40.0% | |
| ACTTGAGCAAGAAAGAGAGG+TGG | + | chr2_1:4099510-4099529 | Msa0188890:CDS | 45.0% | |
| AGATGCAATGCAAGAAGCCG+AGG | + | chr2_1:4099543-4099562 | Msa0188890:CDS | 50.0% | |
| AGCCGAGGAATATCTCGACT+CGG | + | chr2_1:4099558-4099577 | Msa0188890:CDS | 50.0% | |
| AGCCGAGTCGAGATATTCCT+CGG | - | chr2_1:4099563-4099582 | None:intergenic | 50.0% | |
| !! | GGAATATCTCGACTCGGCTA+TGG | + | chr2_1:4099564-4099583 | Msa0188890:CDS | 50.0% |
| AGCAGCTGCCCATGCTTTGT+AGG | - | chr2_1:4099488-4099507 | None:intergenic | 55.0% | |
| !! | CTCGGCTATGGAAAGTGCCA+TGG | + | chr2_1:4099576-4099595 | Msa0188890:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 4099376 | 4099819 | 4099376 | ID=Msa0188890;Name=Msa0188890 |
| chr2_1 | mRNA | 4099376 | 4099819 | 4099376 | ID=Msa0188890-mRNA-1;Parent=Msa0188890;Name=Msa0188890-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|147 |
| chr2_1 | exon | 4099376 | 4099819 | 4099376 | ID=Msa0188890-mRNA-1:exon:1825;Parent=Msa0188890-mRNA-1 |
| chr2_1 | CDS | 4099376 | 4099819 | 4099376 | ID=Msa0188890-mRNA-1:cds;Parent=Msa0188890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
