AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1323690


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1323690 MtrunA17_Chr8g0356311 98.301 412 7 0 1 412 1 412 0.0 836
Msa1323690 MtrunA17_Chr2g0309701 65.947 417 118 6 1 412 4 401 0.0 539
Msa1323690 MtrunA17_Chr7g0254941 53.503 157 69 2 3 156 7 162 1.57e-49 170
Msa1323690 MtrunA17_Chr7g0254941 51.807 83 40 0 329 411 231 313 8.03e-22 95.5
Msa1323690 MtrunA17_Chr8g0356911 31.765 170 100 2 3 158 4 171 1.03e-23 99.8
Msa1323690 MtrunA17_Chr7g0233321 37.333 150 87 4 3 146 74 222 2.94e-23 100
Msa1323690 MtrunA17_Chr1g0175941 34.375 160 99 2 3 156 16 175 1.10e-21 97.8
Msa1323690 MtrunA17_Chr2g0279271 36.913 149 89 3 3 146 116 264 2.62e-20 92.0
Msa1323690 MtrunA17_Chr2g0279251 33.775 151 92 3 3 146 88 237 1.17e-17 84.0
Msa1323690 MtrunA17_Chr4g0050351 34.228 149 92 4 3 146 125 272 2.17e-17 83.6
Msa1323690 MtrunA17_Chr2g0279261 31.788 151 95 5 3 146 110 259 1.66e-14 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1323690 AT1G79340.1 66.274 424 125 6 1 412 1 418 0.0 553
Msa1323690 AT1G79330.1 65.394 419 129 5 1 412 1 410 0.0 551
Msa1323690 AT1G79310.1 55.687 422 158 9 1 412 1 403 6.54e-159 454
Msa1323690 AT1G79320.1 57.488 414 128 6 1 412 1 368 2.86e-158 451
Msa1323690 AT1G16420.1 41.801 433 178 10 1 412 1 380 4.91e-99 300
Msa1323690 AT5G04200.1 36.386 415 156 11 3 411 10 322 2.06e-72 230
Msa1323690 AT1G02170.1 37.584 149 87 4 3 146 80 227 2.87e-23 100
Msa1323690 AT4G25110.2 36.486 148 89 3 3 146 116 262 2.50e-22 98.6
Msa1323690 AT4G25110.1 36.242 149 89 4 3 146 116 263 2.01e-21 95.9
Msa1323690 AT5G64240.2 33.557 149 93 3 3 146 90 237 6.55e-18 85.1
Msa1323690 AT5G64240.1 33.557 149 93 3 3 146 90 237 7.90e-18 84.0

Find 125 sgRNAs with CRISPR-Local

Find 332 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATATACTTAAGCAGAAAAC+TGG 0.288159 8_4:+32260669 Msa1323690:CDS
ATAAGCATTAGCTGCATTTC+CGG 0.302115 8_4:-32261042 None:intergenic
TTCATAAACTTCTTCACTTT+AGG 0.312797 8_4:-32260759 None:intergenic
GGATCTGGCTTTGGATTGTC+TGG 0.324284 8_4:+32260483 Msa1323690:CDS
CTGCTGTTTGTTCATTATAG+TGG 0.327931 8_4:+32259661 Msa1323690:CDS
ATGAAGAAACAAATGAAGAT+AGG 0.350793 8_4:+32260589 Msa1323690:CDS
GAACATTCTGGATCTGGCTT+TGG 0.359410 8_4:+32260474 Msa1323690:CDS
AGGGGATTTCATGTCCCTTC+AGG 0.372762 8_4:+32260543 Msa1323690:CDS
GGAAATGCAGCTAATGCTTA+TGG 0.373990 8_4:+32261044 Msa1323690:CDS
AGGTGGACAAGGTGGGATAC+TGG 0.379608 8_4:+32260818 Msa1323690:CDS
ATAATAACATAATATTCCTT+TGG 0.397376 8_4:-32261418 None:intergenic
ATAATAACATAATATTCCTT+TGG 0.397376 8_4:-32261502 None:intergenic
TTTCTTCATCCCTGCGTGTA+TGG 0.408613 8_4:-32260575 None:intergenic
AAGGGAGAAGAGGAACATTC+TGG 0.411416 8_4:+32260462 Msa1323690:CDS
CCCACCTCTGTCTCCATGGC+AGG 0.417075 8_4:-32260912 None:intergenic
GACAAGCATCTGCTGAAGTC+TGG 0.432339 8_4:-32261016 None:intergenic
CACCTTCACCACCTCCATGC+TGG 0.437332 8_4:-32260800 None:intergenic
CAAAACAGTGATGTCATCTT+CGG 0.443836 8_4:-32259548 None:intergenic
GAAGAGGAACATTCTGGATC+TGG 0.447705 8_4:+32260468 Msa1323690:CDS
AGCTTTCAGCAATGCAATAC+AGG 0.451961 8_4:+32261067 Msa1323690:CDS
TATGATTATTAAAATGATAG+TGG 0.457923 8_4:-32261547 None:intergenic
ACTCGTCTTCCTGCTGAAAC+CGG 0.458013 8_4:+32259691 Msa1323690:CDS
TGATGATTTCAAGGAATTTG+TGG 0.462771 8_4:+32260341 Msa1323690:CDS
AACAATGAATGTTGCTCCAA+AGG 0.465866 8_4:+32261402 Msa1323690:three_prime_UTR
AACAATGAATGTTGCTCCAA+AGG 0.465866 8_4:+32261486 Msa1323690:three_prime_UTR
TCAGCAGATGCTTGTCCTGC+CGG 0.466394 8_4:+32261023 Msa1323690:CDS
CGTCTTATGTTCTTTCCTGT+CGG 0.467651 8_4:-32259598 None:intergenic
GATTGTCTGGCTTTCTGCAT+AGG 0.472012 8_4:+32260496 Msa1323690:CDS
ATGAAATCCCCTGGACTCAA+TGG 0.472573 8_4:-32260532 None:intergenic
ACCGGAGAGGATGATGATAC+TGG 0.478656 8_4:+32259709 Msa1323690:CDS
CAAACACATTAAAATGATAG+TGG 0.483257 8_4:-32261463 None:intergenic
GAACATAAGACGTGTGTTGT+CGG 0.483469 8_4:+32259609 Msa1323690:CDS
CAGATAGGAGAGAGCACAAA+GGG 0.484810 8_4:+32260444 Msa1323690:CDS
GTGAACAGATGATGATTTCA+AGG 0.489198 8_4:+32260332 Msa1323690:intron
TTGAGGATGCCATTGAGTCC+AGG 0.491586 8_4:+32260523 Msa1323690:CDS
ACTTCCCACCTCTGTCTCCA+TGG 0.494438 8_4:-32260916 None:intergenic
TGAAGAAACAAATGAAGATA+GGG 0.494506 8_4:+32260590 Msa1323690:CDS
GGTGGACAAGGTGGGATACT+GGG 0.494635 8_4:+32260819 Msa1323690:CDS
AAAACATATCAGCACAAGAA+AGG 0.502276 8_4:-32261218 None:intergenic
CTCATCAGAATCCCACCGCT+TGG 0.506927 8_4:-32260978 None:intergenic
CGGCTCCGTGTACGACGAAT+CGG 0.506979 8_4:-32259578 None:intergenic
CTGCTTAAGTATATCAATGA+GGG 0.508162 8_4:-32260661 None:intergenic
TCATCCTCTCCGGTTTCAGC+AGG 0.511272 8_4:-32259700 None:intergenic
TTTCAAGGAATTTGTGGATG+GGG 0.511520 8_4:+32260347 Msa1323690:CDS
GAAGAAGCTAAGGAGCAGAT+AGG 0.515777 8_4:+32260429 Msa1323690:CDS
GGTGGTGAAGGTGGACAAGG+TGG 0.521742 8_4:+32260810 Msa1323690:CDS
GCGAGAAAAGCCGTATTGAT+CGG 0.523585 8_4:+32259433 Msa1323690:CDS
TCCCACATGGAGTGAAGAAT+AGG 0.524773 8_4:+32260622 Msa1323690:CDS
ACCAGTATCATCATCCTCTC+CGG 0.525146 8_4:-32259710 None:intergenic
ACCGTCTGTGTGTTTCTCCA+TGG 0.526091 8_4:+32261355 Msa1323690:three_prime_UTR
CTCCAGCATGGAGGTGGTGA+AGG 0.526322 8_4:+32260798 Msa1323690:CDS
GGGAAAGAAAATATAGATGT+TGG 0.529307 8_4:+32260690 Msa1323690:CDS
ATTTCAAGGAATTTGTGGAT+GGG 0.534026 8_4:+32260346 Msa1323690:CDS
TGAAGGGACATGAAATCCCC+TGG 0.538955 8_4:-32260541 None:intergenic
GCATTAGCTGCATTTCCGGC+AGG 0.539676 8_4:-32261038 None:intergenic
GGAGGTGGTGAAGGTGGACA+AGG 0.539731 8_4:+32260807 Msa1323690:CDS
AAATGCTTGATCGAACGTTA+CGG 0.540516 8_4:+32259520 Msa1323690:CDS
AACAAGCTCCAGCATGGAGG+TGG 0.540605 8_4:+32260792 Msa1323690:CDS
AGTAAGCATGAAGTATATGC+TGG 0.543669 8_4:+32260936 Msa1323690:CDS
TGCAATACAGGCTATAATTG+AGG 0.544373 8_4:+32261079 Msa1323690:CDS
GATTTCAAGGAATTTGTGGA+TGG 0.550385 8_4:+32260345 Msa1323690:CDS
TCTGATATGAATCTCATCAC+TGG 0.553185 8_4:+32259754 Msa1323690:CDS
TTTGTTCATTATAGTGGACA+TGG 0.555229 8_4:+32259667 Msa1323690:CDS
AGAGCGAAGCTACAGAAAGA+TGG 0.556470 8_4:+32261146 Msa1323690:CDS
TGAGGATGCCATTGAGTCCA+GGG 0.557608 8_4:+32260524 Msa1323690:CDS
AGGTGGGATACTGGGAATGG+TGG 0.558174 8_4:+32260827 Msa1323690:CDS
GTCGGAGCTGGTGAGATCAT+CGG 0.559141 8_4:+32259627 Msa1323690:CDS
TCGTCGTACACGGAGCCGAC+AGG 0.559875 8_4:+32259583 Msa1323690:CDS
AGAGAGCACAAAGGGAGAAG+AGG 0.560245 8_4:+32260452 Msa1323690:CDS
TGATCACTGCAATAGAGTCC+TGG 0.562515 8_4:-32261182 None:intergenic
GTAGTTGATTCCGATCAATA+CGG 0.563226 8_4:-32259443 None:intergenic
CAGCATGGAGGTGGTGAAGG+TGG 0.564016 8_4:+32260801 Msa1323690:CDS
GCCTGCCATGGAGACAGAGG+TGG 0.572337 8_4:+32260911 Msa1323690:CDS
GGTGGGATACTGGGAATGGT+GGG 0.573761 8_4:+32260828 Msa1323690:CDS
AAGACGTGTGTTGTCGGAGC+TGG 0.574291 8_4:+32259615 Msa1323690:CDS
GATGGATTCACTCAAAAGCC+AGG 0.574901 8_4:+32261164 Msa1323690:CDS
CTTTCTGCATAGGAAAGTTG+AGG 0.574996 8_4:+32260506 Msa1323690:CDS
GGGATATGCAAAGCCTGCCA+TGG 0.575780 8_4:+32260899 Msa1323690:CDS
ATGGGGTTCCTAGAGGATGT+AGG 0.576033 8_4:+32260364 Msa1323690:CDS
TGGCTTGATTGAAGAAGCTA+AGG 0.577289 8_4:+32260419 Msa1323690:CDS
ATACTCGGAGCTTATTCTCA+AGG 0.577748 8_4:+32261121 Msa1323690:CDS
GTGGTGAAGGTGGACAAGGT+GGG 0.577935 8_4:+32260811 Msa1323690:CDS
GTGATGAGATTCATATCAGA+AGG 0.580568 8_4:-32259751 None:intergenic
TCTGCTTAAGTATATCAATG+AGG 0.583793 8_4:-32260662 None:intergenic
TGATGGTGCAATTACATACT+CGG 0.584306 8_4:+32261106 Msa1323690:CDS
ATGGTCAGCCTACATCCTCT+AGG 0.591604 8_4:-32260372 None:intergenic
ATCTTGAACAAGCTCCAGCA+TGG 0.591703 8_4:+32260786 Msa1323690:CDS
CTGGTGAGATCATCGGAGGA+TGG 0.601085 8_4:+32259634 Msa1323690:CDS
ATATACTTAAGCAGAAAACT+GGG 0.608702 8_4:+32260670 Msa1323690:CDS
GACCTATTCTTCACTCCATG+TGG 0.610109 8_4:-32260624 None:intergenic
CGACACCGATTCGTCGTACA+CGG 0.610310 8_4:+32259573 Msa1323690:CDS
TTGTTCATTATAGTGGACAT+GGG 0.616864 8_4:+32259668 Msa1323690:CDS
GATGCGTAAACGACGTGTGG+AGG 0.622173 8_4:+32259491 Msa1323690:CDS
AGCGGTGGGATTCTGATGAG+CGG 0.625209 8_4:+32260981 Msa1323690:CDS
ATATCAATGAGGGTTGAAAG+TGG 0.625536 8_4:-32260651 None:intergenic
TCTGATTCATGCCACAGTGG+TGG 0.633718 8_4:+32260399 Msa1323690:CDS
AAGCTGAATGATAATGACGA+GGG 0.637692 8_4:+32260879 Msa1323690:CDS
TATGGCGACGCAATCCTGAA+GGG 0.639983 8_4:-32260557 None:intergenic
GCAGATAGGAGAGAGCACAA+AGG 0.640959 8_4:+32260443 Msa1323690:CDS
GAGGATGCGTAAACGACGTG+TGG 0.642474 8_4:+32259488 Msa1323690:CDS
ACCTATTCTTCACTCCATGT+GGG 0.644192 8_4:-32260623 None:intergenic
GTGGCATGAATCAGATACAA+TGG 0.644776 8_4:-32260391 None:intergenic
ATATAGATGTTGGTCAACTG+AGG 0.645754 8_4:+32260700 Msa1323690:CDS
CCTGCCATGGAGACAGAGGT+GGG 0.647082 8_4:+32260912 Msa1323690:CDS
GCTATAATTGAGGAGACTGA+TGG 0.648617 8_4:+32261089 Msa1323690:CDS
TTTGTGGATGGGGTTCCTAG+AGG 0.655242 8_4:+32260357 Msa1323690:CDS
ATTAACATACGACTATACCA+TGG 0.661282 8_4:-32261372 None:intergenic
ATTGATCGGAATCAACTACC+CGG 0.662029 8_4:+32259447 Msa1323690:CDS
AGGGATATCGAACTCCCACA+TGG 0.666782 8_4:+32260609 Msa1323690:CDS
AAAGCCTGCCATGGAGACAG+AGG 0.668348 8_4:+32260908 Msa1323690:CDS
ACAAGGTGGGATACTGGGAA+TGG 0.670102 8_4:+32260824 Msa1323690:CDS
TTGATCGGAATCAACTACCC+GGG 0.674290 8_4:+32259448 Msa1323690:CDS
CTTCTTCTAAGATCCAACAA+TGG 0.675766 8_4:+32259411 Msa1323690:exon
GAGGATGCCATTGAGTCCAG+GGG 0.680842 8_4:+32260525 Msa1323690:CDS
ACCATGGAGAAACACACAGA+CGG 0.685693 8_4:-32261356 None:intergenic
GGAGCTGGTGAGATCATCGG+AGG 0.686408 8_4:+32259630 Msa1323690:CDS
TCTTCCTGCTGAAACCGGAG+AGG 0.694590 8_4:+32259696 Msa1323690:CDS
AAAGCTGAATGATAATGACG+AGG 0.698351 8_4:+32260878 Msa1323690:CDS
TCAAAGCGCGGTCTTCCAAG+CGG 0.707343 8_4:+32260963 Msa1323690:CDS
ACAAGAAAGGATCATCAACA+TGG 0.709272 8_4:-32261205 None:intergenic
TTGAACAAGCTCCAGCATGG+AGG 0.724624 8_4:+32260789 Msa1323690:CDS
TATGCTGGATCGTCAAAGCG+CGG 0.728471 8_4:+32260951 Msa1323690:CDS
GGAACAAAAGCAGAATTACG+AGG 0.740123 8_4:+32259469 Msa1323690:CDS
CTTCAATCAAGCCACCACTG+TGG 0.744555 8_4:-32260410 None:intergenic
GTATCTGATTCATGCCACAG+TGG 0.772525 8_4:+32260396 Msa1323690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTTTGTAATCTTTATATA+GGG + chr8_4:32260243-32260262 Msa1323690:intron 15.0%
!! ATAATAACATAATATTCCTT+TGG - chr8_4:32261421-32261440 None:intergenic 15.0%
!! ATAATAACATAATATTCCTT+TGG - chr8_4:32261421-32261440 None:intergenic 15.0%
!! ATGTTTGTAATCTTTATATA+GGG + chr8_4:32260243-32260262 Msa1323690:intron 15.0%
!! ATAATAACATAATATTCCTT+TGG - chr8_4:32261421-32261440 None:intergenic 15.0%
!! ATAATAACATAATATTCCTT+TGG - chr8_4:32261421-32261440 None:intergenic 15.0%
!! GAAGATGAAGAAAAAAAAAA+AGG - chr8_4:32259395-32259414 None:intergenic 20.0%
!! AAAAATGAGAGTAGTTTATT+TGG - chr8_4:32259786-32259805 None:intergenic 20.0%
!!! CTTGATTTTATTTGTTGATA+AGG + chr8_4:32259937-32259956 Msa1323690:intron 20.0%
!! TTTAAAAAGTTTCTTGTAGT+TGG - chr8_4:32259982-32260001 None:intergenic 20.0%
!! TTTAGTATACATGAATTGAA+AGG + chr8_4:32260161-32260180 Msa1323690:intron 20.0%
!! CATGTTTGTAATCTTTATAT+AGG + chr8_4:32260242-32260261 Msa1323690:intron 20.0%
!! GAAGATGAAGAAAAAAAAAA+AGG - chr8_4:32259395-32259414 None:intergenic 20.0%
!! AAAAATGAGAGTAGTTTATT+TGG - chr8_4:32259786-32259805 None:intergenic 20.0%
!!! CTTGATTTTATTTGTTGATA+AGG + chr8_4:32259937-32259956 Msa1323690:intron 20.0%
!! TTTAAAAAGTTTCTTGTAGT+TGG - chr8_4:32259982-32260001 None:intergenic 20.0%
!! TTTAGTATACATGAATTGAA+AGG + chr8_4:32260161-32260180 Msa1323690:intron 20.0%
!! CATGTTTGTAATCTTTATAT+AGG + chr8_4:32260242-32260261 Msa1323690:intron 20.0%
!!! AAGGTTGTTTCAATGATTTT+TGG - chr8_4:32259376-32259395 None:intergenic 25.0%
!!! TCTGTTTTTGTTTTGATCAA+GGG + chr8_4:32259821-32259840 Msa1323690:intron 25.0%
! ATGAAGAAACAAATGAAGAT+AGG + chr8_4:32260589-32260608 Msa1323690:CDS 25.0%
! TGAAGAAACAAATGAAGATA+GGG + chr8_4:32260590-32260609 Msa1323690:CDS 25.0%
! ATATACTTAAGCAGAAAACT+GGG + chr8_4:32260670-32260689 Msa1323690:CDS 25.0%
!!! CTACACTTTTTGACATTTTT+GGG + chr8_4:32260724-32260743 Msa1323690:CDS 25.0%
!!! TACACTTTTTGACATTTTTG+GGG + chr8_4:32260725-32260744 Msa1323690:CDS 25.0%
! TTCATAAACTTCTTCACTTT+AGG - chr8_4:32260762-32260781 None:intergenic 25.0%
! TCATGCAAAAAGAGAATAAT+GGG + chr8_4:32261245-32261264 Msa1323690:three_prime_UTR 25.0%
! CAAACACATTAAAATGATAG+TGG - chr8_4:32261466-32261485 None:intergenic 25.0%
!!! AAGGTTGTTTCAATGATTTT+TGG - chr8_4:32259376-32259395 None:intergenic 25.0%
!!! TCTGTTTTTGTTTTGATCAA+GGG + chr8_4:32259821-32259840 Msa1323690:intron 25.0%
! ATGAAGAAACAAATGAAGAT+AGG + chr8_4:32260589-32260608 Msa1323690:CDS 25.0%
! TGAAGAAACAAATGAAGATA+GGG + chr8_4:32260590-32260609 Msa1323690:CDS 25.0%
! ATATACTTAAGCAGAAAACT+GGG + chr8_4:32260670-32260689 Msa1323690:CDS 25.0%
!!! CTACACTTTTTGACATTTTT+GGG + chr8_4:32260724-32260743 Msa1323690:CDS 25.0%
!!! TACACTTTTTGACATTTTTG+GGG + chr8_4:32260725-32260744 Msa1323690:CDS 25.0%
! TTCATAAACTTCTTCACTTT+AGG - chr8_4:32260762-32260781 None:intergenic 25.0%
! TCATGCAAAAAGAGAATAAT+GGG + chr8_4:32261245-32261264 Msa1323690:three_prime_UTR 25.0%
! CAAACACATTAAAATGATAG+TGG - chr8_4:32261466-32261485 None:intergenic 25.0%
!! TTTGTTCATTATAGTGGACA+TGG + chr8_4:32259667-32259686 Msa1323690:CDS 30.0%
!! TTGTTCATTATAGTGGACAT+GGG + chr8_4:32259668-32259687 Msa1323690:CDS 30.0%
!!! CTCTGTTTTTGTTTTGATCA+AGG + chr8_4:32259820-32259839 Msa1323690:intron 30.0%
TGATAAGGAATATCCAGATA+CGG + chr8_4:32259952-32259971 Msa1323690:intron 30.0%
ATTTCGTGTAGAGATAGAAA+TGG + chr8_4:32260034-32260053 Msa1323690:intron 30.0%
ATGGAGAAAATTCATAGATC+AGG + chr8_4:32260053-32260072 Msa1323690:intron 30.0%
!! TAAAATTCGAACATTGGTTC+CGG - chr8_4:32260122-32260141 None:intergenic 30.0%
CTCGATTAAAATTCGAACAT+TGG - chr8_4:32260128-32260147 None:intergenic 30.0%
ATGAATTGAAAGGAACAGAA+GGG + chr8_4:32260171-32260190 Msa1323690:intron 30.0%
ATGTCATTAGTGAGTAGTAA+TGG + chr8_4:32260274-32260293 Msa1323690:intron 30.0%
TGATGATTTCAAGGAATTTG+TGG + chr8_4:32260341-32260360 Msa1323690:CDS 30.0%
ATTTCAAGGAATTTGTGGAT+GGG + chr8_4:32260346-32260365 Msa1323690:CDS 30.0%
CTGCTTAAGTATATCAATGA+GGG - chr8_4:32260664-32260683 None:intergenic 30.0%
TCTGCTTAAGTATATCAATG+AGG - chr8_4:32260665-32260684 None:intergenic 30.0%
GATATACTTAAGCAGAAAAC+TGG + chr8_4:32260669-32260688 Msa1323690:CDS 30.0%
GGGAAAGAAAATATAGATGT+TGG + chr8_4:32260690-32260709 Msa1323690:CDS 30.0%
! CCAAAAATGTCAAAAAGTGT+AGG - chr8_4:32260726-32260745 None:intergenic 30.0%
!! CCTACACTTTTTGACATTTT+TGG + chr8_4:32260723-32260742 Msa1323690:CDS 30.0%
! CTTTTGCTTAAGAAACTCTT+GGG - chr8_4:32260862-32260881 None:intergenic 30.0%
AAAACATATCAGCACAAGAA+AGG - chr8_4:32261221-32261240 None:intergenic 30.0%
CTCATGCAAAAAGAGAATAA+TGG + chr8_4:32261244-32261263 Msa1323690:three_prime_UTR 30.0%
! TTTTGTAACAAACTTGACGA+TGG + chr8_4:32261314-32261333 Msa1323690:three_prime_UTR 30.0%
ATTAACATACGACTATACCA+TGG - chr8_4:32261375-32261394 None:intergenic 30.0%
!! TTTGTTCATTATAGTGGACA+TGG + chr8_4:32259667-32259686 Msa1323690:CDS 30.0%
!! TTGTTCATTATAGTGGACAT+GGG + chr8_4:32259668-32259687 Msa1323690:CDS 30.0%
!!! CTCTGTTTTTGTTTTGATCA+AGG + chr8_4:32259820-32259839 Msa1323690:intron 30.0%
TGATAAGGAATATCCAGATA+CGG + chr8_4:32259952-32259971 Msa1323690:intron 30.0%
ATTTCGTGTAGAGATAGAAA+TGG + chr8_4:32260034-32260053 Msa1323690:intron 30.0%
ATGGAGAAAATTCATAGATC+AGG + chr8_4:32260053-32260072 Msa1323690:intron 30.0%
!! TAAAATTCGAACATTGGTTC+CGG - chr8_4:32260122-32260141 None:intergenic 30.0%
CTCGATTAAAATTCGAACAT+TGG - chr8_4:32260128-32260147 None:intergenic 30.0%
ATGAATTGAAAGGAACAGAA+GGG + chr8_4:32260171-32260190 Msa1323690:intron 30.0%
ATGTCATTAGTGAGTAGTAA+TGG + chr8_4:32260274-32260293 Msa1323690:intron 30.0%
TGATGATTTCAAGGAATTTG+TGG + chr8_4:32260341-32260360 Msa1323690:CDS 30.0%
ATTTCAAGGAATTTGTGGAT+GGG + chr8_4:32260346-32260365 Msa1323690:CDS 30.0%
CTGCTTAAGTATATCAATGA+GGG - chr8_4:32260664-32260683 None:intergenic 30.0%
TCTGCTTAAGTATATCAATG+AGG - chr8_4:32260665-32260684 None:intergenic 30.0%
GATATACTTAAGCAGAAAAC+TGG + chr8_4:32260669-32260688 Msa1323690:CDS 30.0%
GGGAAAGAAAATATAGATGT+TGG + chr8_4:32260690-32260709 Msa1323690:CDS 30.0%
! CCAAAAATGTCAAAAAGTGT+AGG - chr8_4:32260726-32260745 None:intergenic 30.0%
!! CCTACACTTTTTGACATTTT+TGG + chr8_4:32260723-32260742 Msa1323690:CDS 30.0%
! CTTTTGCTTAAGAAACTCTT+GGG - chr8_4:32260862-32260881 None:intergenic 30.0%
AAAACATATCAGCACAAGAA+AGG - chr8_4:32261221-32261240 None:intergenic 30.0%
CTCATGCAAAAAGAGAATAA+TGG + chr8_4:32261244-32261263 Msa1323690:three_prime_UTR 30.0%
! TTTTGTAACAAACTTGACGA+TGG + chr8_4:32261314-32261333 Msa1323690:three_prime_UTR 30.0%
ATTAACATACGACTATACCA+TGG - chr8_4:32261375-32261394 None:intergenic 30.0%
!! CTTCTTCTAAGATCCAACAA+TGG + chr8_4:32259411-32259430 Msa1323690:exon 35.0%
! GTAGTTGATTCCGATCAATA+CGG - chr8_4:32259446-32259465 None:intergenic 35.0%
AAATGCTTGATCGAACGTTA+CGG + chr8_4:32259520-32259539 Msa1323690:CDS 35.0%
CAAAACAGTGATGTCATCTT+CGG - chr8_4:32259551-32259570 None:intergenic 35.0%
! CTGCTGTTTGTTCATTATAG+TGG + chr8_4:32259661-32259680 Msa1323690:CDS 35.0%
GTGATGAGATTCATATCAGA+AGG - chr8_4:32259754-32259773 None:intergenic 35.0%
TCTGATATGAATCTCATCAC+TGG + chr8_4:32259754-32259773 Msa1323690:CDS 35.0%
CATGAATTGAAAGGAACAGA+AGG + chr8_4:32260170-32260189 Msa1323690:intron 35.0%
GTGAACAGATGATGATTTCA+AGG + chr8_4:32260332-32260351 Msa1323690:intron 35.0%
GATTTCAAGGAATTTGTGGA+TGG + chr8_4:32260345-32260364 Msa1323690:CDS 35.0%
TTTCAAGGAATTTGTGGATG+GGG + chr8_4:32260347-32260366 Msa1323690:CDS 35.0%
ATATCAATGAGGGTTGAAAG+TGG - chr8_4:32260654-32260673 None:intergenic 35.0%
ATATAGATGTTGGTCAACTG+AGG + chr8_4:32260700-32260719 Msa1323690:CDS 35.0%
! GCTTTTGCTTAAGAAACTCT+TGG - chr8_4:32260863-32260882 None:intergenic 35.0%
! AAAGCTGAATGATAATGACG+AGG + chr8_4:32260878-32260897 Msa1323690:CDS 35.0%
! AAGCTGAATGATAATGACGA+GGG + chr8_4:32260879-32260898 Msa1323690:CDS 35.0%
AGTAAGCATGAAGTATATGC+TGG + chr8_4:32260936-32260955 Msa1323690:CDS 35.0%
ATAAGCATTAGCTGCATTTC+CGG - chr8_4:32261045-32261064 None:intergenic 35.0%
TGCAATACAGGCTATAATTG+AGG + chr8_4:32261079-32261098 Msa1323690:CDS 35.0%
! TGATGGTGCAATTACATACT+CGG + chr8_4:32261106-32261125 Msa1323690:CDS 35.0%
ACAAGAAAGGATCATCAACA+TGG - chr8_4:32261208-32261227 None:intergenic 35.0%
AACAATGAATGTTGCTCCAA+AGG + chr8_4:32261402-32261421 Msa1323690:three_prime_UTR 35.0%
AACAATGAATGTTGCTCCAA+AGG + chr8_4:32261402-32261421 Msa1323690:three_prime_UTR 35.0%
!! CTTCTTCTAAGATCCAACAA+TGG + chr8_4:32259411-32259430 Msa1323690:exon 35.0%
! GTAGTTGATTCCGATCAATA+CGG - chr8_4:32259446-32259465 None:intergenic 35.0%
AAATGCTTGATCGAACGTTA+CGG + chr8_4:32259520-32259539 Msa1323690:CDS 35.0%
CAAAACAGTGATGTCATCTT+CGG - chr8_4:32259551-32259570 None:intergenic 35.0%
! CTGCTGTTTGTTCATTATAG+TGG + chr8_4:32259661-32259680 Msa1323690:CDS 35.0%
GTGATGAGATTCATATCAGA+AGG - chr8_4:32259754-32259773 None:intergenic 35.0%
TCTGATATGAATCTCATCAC+TGG + chr8_4:32259754-32259773 Msa1323690:CDS 35.0%
CATGAATTGAAAGGAACAGA+AGG + chr8_4:32260170-32260189 Msa1323690:intron 35.0%
GTGAACAGATGATGATTTCA+AGG + chr8_4:32260332-32260351 Msa1323690:intron 35.0%
GATTTCAAGGAATTTGTGGA+TGG + chr8_4:32260345-32260364 Msa1323690:CDS 35.0%
TTTCAAGGAATTTGTGGATG+GGG + chr8_4:32260347-32260366 Msa1323690:CDS 35.0%
ATATCAATGAGGGTTGAAAG+TGG - chr8_4:32260654-32260673 None:intergenic 35.0%
ATATAGATGTTGGTCAACTG+AGG + chr8_4:32260700-32260719 Msa1323690:CDS 35.0%
! GCTTTTGCTTAAGAAACTCT+TGG - chr8_4:32260863-32260882 None:intergenic 35.0%
! AAAGCTGAATGATAATGACG+AGG + chr8_4:32260878-32260897 Msa1323690:CDS 35.0%
! AAGCTGAATGATAATGACGA+GGG + chr8_4:32260879-32260898 Msa1323690:CDS 35.0%
AGTAAGCATGAAGTATATGC+TGG + chr8_4:32260936-32260955 Msa1323690:CDS 35.0%
ATAAGCATTAGCTGCATTTC+CGG - chr8_4:32261045-32261064 None:intergenic 35.0%
TGCAATACAGGCTATAATTG+AGG + chr8_4:32261079-32261098 Msa1323690:CDS 35.0%
! TGATGGTGCAATTACATACT+CGG + chr8_4:32261106-32261125 Msa1323690:CDS 35.0%
ACAAGAAAGGATCATCAACA+TGG - chr8_4:32261208-32261227 None:intergenic 35.0%
AACAATGAATGTTGCTCCAA+AGG + chr8_4:32261402-32261421 Msa1323690:three_prime_UTR 35.0%
AACAATGAATGTTGCTCCAA+AGG + chr8_4:32261402-32261421 Msa1323690:three_prime_UTR 35.0%
ATTGATCGGAATCAACTACC+CGG + chr8_4:32259447-32259466 Msa1323690:CDS 40.0%
!! GTAATTCTGCTTTTGTTCCC+GGG - chr8_4:32259468-32259487 None:intergenic 40.0%
!! CGTAATTCTGCTTTTGTTCC+CGG - chr8_4:32259469-32259488 None:intergenic 40.0%
GGAACAAAAGCAGAATTACG+AGG + chr8_4:32259469-32259488 Msa1323690:CDS 40.0%
CGTCTTATGTTCTTTCCTGT+CGG - chr8_4:32259601-32259620 None:intergenic 40.0%
GAACATAAGACGTGTGTTGT+CGG + chr8_4:32259609-32259628 Msa1323690:CDS 40.0%
TGTAGTTGGAATTCCGTATC+TGG - chr8_4:32259968-32259987 None:intergenic 40.0%
AGGTAAGATTGTCTCCATAG+TGG + chr8_4:32260073-32260092 Msa1323690:intron 40.0%
GATTCTGGTCAATTCCACTA+TGG - chr8_4:32260090-32260109 None:intergenic 40.0%
GTGGCATGAATCAGATACAA+TGG - chr8_4:32260394-32260413 None:intergenic 40.0%
TGGCTTGATTGAAGAAGCTA+AGG + chr8_4:32260419-32260438 Msa1323690:CDS 40.0%
CTTTCTGCATAGGAAAGTTG+AGG + chr8_4:32260506-32260525 Msa1323690:CDS 40.0%
ACCTATTCTTCACTCCATGT+GGG - chr8_4:32260626-32260645 None:intergenic 40.0%
GGAAATGCAGCTAATGCTTA+TGG + chr8_4:32261044-32261063 Msa1323690:CDS 40.0%
AGCTTTCAGCAATGCAATAC+AGG + chr8_4:32261067-32261086 Msa1323690:CDS 40.0%
GCTATAATTGAGGAGACTGA+TGG + chr8_4:32261089-32261108 Msa1323690:CDS 40.0%
ATACTCGGAGCTTATTCTCA+AGG + chr8_4:32261121-32261140 Msa1323690:CDS 40.0%
ATTGATCGGAATCAACTACC+CGG + chr8_4:32259447-32259466 Msa1323690:CDS 40.0%
!! GTAATTCTGCTTTTGTTCCC+GGG - chr8_4:32259468-32259487 None:intergenic 40.0%
!! CGTAATTCTGCTTTTGTTCC+CGG - chr8_4:32259469-32259488 None:intergenic 40.0%
GGAACAAAAGCAGAATTACG+AGG + chr8_4:32259469-32259488 Msa1323690:CDS 40.0%
CGTCTTATGTTCTTTCCTGT+CGG - chr8_4:32259601-32259620 None:intergenic 40.0%
GAACATAAGACGTGTGTTGT+CGG + chr8_4:32259609-32259628 Msa1323690:CDS 40.0%
TGTAGTTGGAATTCCGTATC+TGG - chr8_4:32259968-32259987 None:intergenic 40.0%
AGGTAAGATTGTCTCCATAG+TGG + chr8_4:32260073-32260092 Msa1323690:intron 40.0%
GATTCTGGTCAATTCCACTA+TGG - chr8_4:32260090-32260109 None:intergenic 40.0%
GTGGCATGAATCAGATACAA+TGG - chr8_4:32260394-32260413 None:intergenic 40.0%
TGGCTTGATTGAAGAAGCTA+AGG + chr8_4:32260419-32260438 Msa1323690:CDS 40.0%
CTTTCTGCATAGGAAAGTTG+AGG + chr8_4:32260506-32260525 Msa1323690:CDS 40.0%
ACCTATTCTTCACTCCATGT+GGG - chr8_4:32260626-32260645 None:intergenic 40.0%
GGAAATGCAGCTAATGCTTA+TGG + chr8_4:32261044-32261063 Msa1323690:CDS 40.0%
AGCTTTCAGCAATGCAATAC+AGG + chr8_4:32261067-32261086 Msa1323690:CDS 40.0%
GCTATAATTGAGGAGACTGA+TGG + chr8_4:32261089-32261108 Msa1323690:CDS 40.0%
ATACTCGGAGCTTATTCTCA+AGG + chr8_4:32261121-32261140 Msa1323690:CDS 40.0%
! GCGAGAAAAGCCGTATTGAT+CGG + chr8_4:32259433-32259452 Msa1323690:CDS 45.0%
TTGATCGGAATCAACTACCC+GGG + chr8_4:32259448-32259467 Msa1323690:CDS 45.0%
ACCAGTATCATCATCCTCTC+CGG - chr8_4:32259713-32259732 None:intergenic 45.0%
GACCAGAATCTCACAATCTC+CGG + chr8_4:32260100-32260119 Msa1323690:intron 45.0%
TTCCGGAGATTGTGAGATTC+TGG - chr8_4:32260105-32260124 None:intergenic 45.0%
GTATCTGATTCATGCCACAG+TGG + chr8_4:32260396-32260415 Msa1323690:CDS 45.0%
GAAGAAGCTAAGGAGCAGAT+AGG + chr8_4:32260429-32260448 Msa1323690:CDS 45.0%
! CAGATAGGAGAGAGCACAAA+GGG + chr8_4:32260444-32260463 Msa1323690:CDS 45.0%
AAGGGAGAAGAGGAACATTC+TGG + chr8_4:32260462-32260481 Msa1323690:CDS 45.0%
GAAGAGGAACATTCTGGATC+TGG + chr8_4:32260468-32260487 Msa1323690:CDS 45.0%
! GAACATTCTGGATCTGGCTT+TGG + chr8_4:32260474-32260493 Msa1323690:CDS 45.0%
!! GATTGTCTGGCTTTCTGCAT+AGG + chr8_4:32260496-32260515 Msa1323690:CDS 45.0%
ATGAAATCCCCTGGACTCAA+TGG - chr8_4:32260535-32260554 None:intergenic 45.0%
TTTCTTCATCCCTGCGTGTA+TGG - chr8_4:32260578-32260597 None:intergenic 45.0%
TCCCACATGGAGTGAAGAAT+AGG + chr8_4:32260622-32260641 Msa1323690:CDS 45.0%
GACCTATTCTTCACTCCATG+TGG - chr8_4:32260627-32260646 None:intergenic 45.0%
ATCTTGAACAAGCTCCAGCA+TGG + chr8_4:32260786-32260805 Msa1323690:CDS 45.0%
AGAGCGAAGCTACAGAAAGA+TGG + chr8_4:32261146-32261165 Msa1323690:CDS 45.0%
! GATGGATTCACTCAAAAGCC+AGG + chr8_4:32261164-32261183 Msa1323690:CDS 45.0%
TGATCACTGCAATAGAGTCC+TGG - chr8_4:32261185-32261204 None:intergenic 45.0%
ACCATGGAGAAACACACAGA+CGG - chr8_4:32261359-32261378 None:intergenic 45.0%
! GCGAGAAAAGCCGTATTGAT+CGG + chr8_4:32259433-32259452 Msa1323690:CDS 45.0%
TTGATCGGAATCAACTACCC+GGG + chr8_4:32259448-32259467 Msa1323690:CDS 45.0%
ACCAGTATCATCATCCTCTC+CGG - chr8_4:32259713-32259732 None:intergenic 45.0%
GACCAGAATCTCACAATCTC+CGG + chr8_4:32260100-32260119 Msa1323690:intron 45.0%
TTCCGGAGATTGTGAGATTC+TGG - chr8_4:32260105-32260124 None:intergenic 45.0%
GTATCTGATTCATGCCACAG+TGG + chr8_4:32260396-32260415 Msa1323690:CDS 45.0%
GAAGAAGCTAAGGAGCAGAT+AGG + chr8_4:32260429-32260448 Msa1323690:CDS 45.0%
! CAGATAGGAGAGAGCACAAA+GGG + chr8_4:32260444-32260463 Msa1323690:CDS 45.0%
AAGGGAGAAGAGGAACATTC+TGG + chr8_4:32260462-32260481 Msa1323690:CDS 45.0%
GAAGAGGAACATTCTGGATC+TGG + chr8_4:32260468-32260487 Msa1323690:CDS 45.0%
! GAACATTCTGGATCTGGCTT+TGG + chr8_4:32260474-32260493 Msa1323690:CDS 45.0%
!! GATTGTCTGGCTTTCTGCAT+AGG + chr8_4:32260496-32260515 Msa1323690:CDS 45.0%
ATGAAATCCCCTGGACTCAA+TGG - chr8_4:32260535-32260554 None:intergenic 45.0%
TTTCTTCATCCCTGCGTGTA+TGG - chr8_4:32260578-32260597 None:intergenic 45.0%
TCCCACATGGAGTGAAGAAT+AGG + chr8_4:32260622-32260641 Msa1323690:CDS 45.0%
GACCTATTCTTCACTCCATG+TGG - chr8_4:32260627-32260646 None:intergenic 45.0%
ATCTTGAACAAGCTCCAGCA+TGG + chr8_4:32260786-32260805 Msa1323690:CDS 45.0%
AGAGCGAAGCTACAGAAAGA+TGG + chr8_4:32261146-32261165 Msa1323690:CDS 45.0%
! GATGGATTCACTCAAAAGCC+AGG + chr8_4:32261164-32261183 Msa1323690:CDS 45.0%
TGATCACTGCAATAGAGTCC+TGG - chr8_4:32261185-32261204 None:intergenic 45.0%
ACCATGGAGAAACACACAGA+CGG - chr8_4:32261359-32261378 None:intergenic 45.0%
! ACGGCTTTTCTCGCCATTGT+TGG - chr8_4:32259427-32259446 None:intergenic 50.0%
ACTCGTCTTCCTGCTGAAAC+CGG + chr8_4:32259691-32259710 Msa1323690:CDS 50.0%
ACCGGAGAGGATGATGATAC+TGG + chr8_4:32259709-32259728 Msa1323690:CDS 50.0%
! GGGTTAGTAGAGCTTTCGTC+TGG + chr8_4:32259841-32259860 Msa1323690:intron 50.0%
AAGGAACAGAAGGGAACGTG+TGG + chr8_4:32260180-32260199 Msa1323690:intron 50.0%
TTTGTGGATGGGGTTCCTAG+AGG + chr8_4:32260357-32260376 Msa1323690:CDS 50.0%
ATGGGGTTCCTAGAGGATGT+AGG + chr8_4:32260364-32260383 Msa1323690:CDS 50.0%
ATGGTCAGCCTACATCCTCT+AGG - chr8_4:32260375-32260394 None:intergenic 50.0%
TCTGATTCATGCCACAGTGG+TGG + chr8_4:32260399-32260418 Msa1323690:CDS 50.0%
CTTCAATCAAGCCACCACTG+TGG - chr8_4:32260413-32260432 None:intergenic 50.0%
! GCAGATAGGAGAGAGCACAA+AGG + chr8_4:32260443-32260462 Msa1323690:CDS 50.0%
! AGAGAGCACAAAGGGAGAAG+AGG + chr8_4:32260452-32260471 Msa1323690:CDS 50.0%
!! GGATCTGGCTTTGGATTGTC+TGG + chr8_4:32260483-32260502 Msa1323690:CDS 50.0%
TTGAGGATGCCATTGAGTCC+AGG + chr8_4:32260523-32260542 Msa1323690:CDS 50.0%
TGAGGATGCCATTGAGTCCA+GGG + chr8_4:32260524-32260543 Msa1323690:CDS 50.0%
TGAAGGGACATGAAATCCCC+TGG - chr8_4:32260544-32260563 None:intergenic 50.0%
AGGGGATTTCATGTCCCTTC+AGG + chr8_4:32260543-32260562 Msa1323690:CDS 50.0%
TATGGCGACGCAATCCTGAA+GGG - chr8_4:32260560-32260579 None:intergenic 50.0%
AGGGATATCGAACTCCCACA+TGG + chr8_4:32260609-32260628 Msa1323690:CDS 50.0%
TTGAACAAGCTCCAGCATGG+AGG + chr8_4:32260789-32260808 Msa1323690:CDS 50.0%
ACAAGGTGGGATACTGGGAA+TGG + chr8_4:32260824-32260843 Msa1323690:CDS 50.0%
TATGCTGGATCGTCAAAGCG+CGG + chr8_4:32260951-32260970 Msa1323690:CDS 50.0%
GACAAGCATCTGCTGAAGTC+TGG - chr8_4:32261019-32261038 None:intergenic 50.0%
ACCGTCTGTGTGTTTCTCCA+TGG + chr8_4:32261355-32261374 Msa1323690:three_prime_UTR 50.0%
! ACGGCTTTTCTCGCCATTGT+TGG - chr8_4:32259427-32259446 None:intergenic 50.0%
ACTCGTCTTCCTGCTGAAAC+CGG + chr8_4:32259691-32259710 Msa1323690:CDS 50.0%
ACCGGAGAGGATGATGATAC+TGG + chr8_4:32259709-32259728 Msa1323690:CDS 50.0%
! GGGTTAGTAGAGCTTTCGTC+TGG + chr8_4:32259841-32259860 Msa1323690:intron 50.0%
AAGGAACAGAAGGGAACGTG+TGG + chr8_4:32260180-32260199 Msa1323690:intron 50.0%
TTTGTGGATGGGGTTCCTAG+AGG + chr8_4:32260357-32260376 Msa1323690:CDS 50.0%
ATGGGGTTCCTAGAGGATGT+AGG + chr8_4:32260364-32260383 Msa1323690:CDS 50.0%
ATGGTCAGCCTACATCCTCT+AGG - chr8_4:32260375-32260394 None:intergenic 50.0%
TCTGATTCATGCCACAGTGG+TGG + chr8_4:32260399-32260418 Msa1323690:CDS 50.0%
CTTCAATCAAGCCACCACTG+TGG - chr8_4:32260413-32260432 None:intergenic 50.0%
! GCAGATAGGAGAGAGCACAA+AGG + chr8_4:32260443-32260462 Msa1323690:CDS 50.0%
! AGAGAGCACAAAGGGAGAAG+AGG + chr8_4:32260452-32260471 Msa1323690:CDS 50.0%
!! GGATCTGGCTTTGGATTGTC+TGG + chr8_4:32260483-32260502 Msa1323690:CDS 50.0%
TTGAGGATGCCATTGAGTCC+AGG + chr8_4:32260523-32260542 Msa1323690:CDS 50.0%
TGAGGATGCCATTGAGTCCA+GGG + chr8_4:32260524-32260543 Msa1323690:CDS 50.0%
TGAAGGGACATGAAATCCCC+TGG - chr8_4:32260544-32260563 None:intergenic 50.0%
AGGGGATTTCATGTCCCTTC+AGG + chr8_4:32260543-32260562 Msa1323690:CDS 50.0%
TATGGCGACGCAATCCTGAA+GGG - chr8_4:32260560-32260579 None:intergenic 50.0%
AGGGATATCGAACTCCCACA+TGG + chr8_4:32260609-32260628 Msa1323690:CDS 50.0%
TTGAACAAGCTCCAGCATGG+AGG + chr8_4:32260789-32260808 Msa1323690:CDS 50.0%
ACAAGGTGGGATACTGGGAA+TGG + chr8_4:32260824-32260843 Msa1323690:CDS 50.0%
TATGCTGGATCGTCAAAGCG+CGG + chr8_4:32260951-32260970 Msa1323690:CDS 50.0%
GACAAGCATCTGCTGAAGTC+TGG - chr8_4:32261019-32261038 None:intergenic 50.0%
ACCGTCTGTGTGTTTCTCCA+TGG + chr8_4:32261355-32261374 Msa1323690:three_prime_UTR 50.0%
GAGGATGCGTAAACGACGTG+TGG + chr8_4:32259488-32259507 Msa1323690:CDS 55.0%
GATGCGTAAACGACGTGTGG+AGG + chr8_4:32259491-32259510 Msa1323690:CDS 55.0%
!! CGACACCGATTCGTCGTACA+CGG + chr8_4:32259573-32259592 Msa1323690:CDS 55.0%
AAGACGTGTGTTGTCGGAGC+TGG + chr8_4:32259615-32259634 Msa1323690:CDS 55.0%
GTCGGAGCTGGTGAGATCAT+CGG + chr8_4:32259627-32259646 Msa1323690:CDS 55.0%
CTGGTGAGATCATCGGAGGA+TGG + chr8_4:32259634-32259653 Msa1323690:CDS 55.0%
TCTTCCTGCTGAAACCGGAG+AGG + chr8_4:32259696-32259715 Msa1323690:CDS 55.0%
TCATCCTCTCCGGTTTCAGC+AGG - chr8_4:32259703-32259722 None:intergenic 55.0%
GAGGATGCCATTGAGTCCAG+GGG + chr8_4:32260525-32260544 Msa1323690:CDS 55.0%
GTATGGCGACGCAATCCTGA+AGG - chr8_4:32260561-32260580 None:intergenic 55.0%
ATTGCGTCGCCATACACGCA+GGG + chr8_4:32260566-32260585 Msa1323690:CDS 55.0%
AACAAGCTCCAGCATGGAGG+TGG + chr8_4:32260792-32260811 Msa1323690:CDS 55.0%
GTGGTGAAGGTGGACAAGGT+GGG + chr8_4:32260811-32260830 Msa1323690:CDS 55.0%
AGGTGGACAAGGTGGGATAC+TGG + chr8_4:32260818-32260837 Msa1323690:CDS 55.0%
GGTGGACAAGGTGGGATACT+GGG + chr8_4:32260819-32260838 Msa1323690:CDS 55.0%
AGGTGGGATACTGGGAATGG+TGG + chr8_4:32260827-32260846 Msa1323690:CDS 55.0%
GGTGGGATACTGGGAATGGT+GGG + chr8_4:32260828-32260847 Msa1323690:CDS 55.0%
GGGATATGCAAAGCCTGCCA+TGG + chr8_4:32260899-32260918 Msa1323690:CDS 55.0%
AAAGCCTGCCATGGAGACAG+AGG + chr8_4:32260908-32260927 Msa1323690:CDS 55.0%
ACTTCCCACCTCTGTCTCCA+TGG - chr8_4:32260919-32260938 None:intergenic 55.0%
TCAAAGCGCGGTCTTCCAAG+CGG + chr8_4:32260963-32260982 Msa1323690:CDS 55.0%
CTCATCAGAATCCCACCGCT+TGG - chr8_4:32260981-32261000 None:intergenic 55.0%
AGCGGTGGGATTCTGATGAG+CGG + chr8_4:32260981-32261000 Msa1323690:CDS 55.0%
TCAGCAGATGCTTGTCCTGC+CGG + chr8_4:32261023-32261042 Msa1323690:CDS 55.0%
GCATTAGCTGCATTTCCGGC+AGG - chr8_4:32261041-32261060 None:intergenic 55.0%
GAGGATGCGTAAACGACGTG+TGG + chr8_4:32259488-32259507 Msa1323690:CDS 55.0%
GATGCGTAAACGACGTGTGG+AGG + chr8_4:32259491-32259510 Msa1323690:CDS 55.0%
!! CGACACCGATTCGTCGTACA+CGG + chr8_4:32259573-32259592 Msa1323690:CDS 55.0%
AAGACGTGTGTTGTCGGAGC+TGG + chr8_4:32259615-32259634 Msa1323690:CDS 55.0%
GTCGGAGCTGGTGAGATCAT+CGG + chr8_4:32259627-32259646 Msa1323690:CDS 55.0%
CTGGTGAGATCATCGGAGGA+TGG + chr8_4:32259634-32259653 Msa1323690:CDS 55.0%
TCTTCCTGCTGAAACCGGAG+AGG + chr8_4:32259696-32259715 Msa1323690:CDS 55.0%
TCATCCTCTCCGGTTTCAGC+AGG - chr8_4:32259703-32259722 None:intergenic 55.0%
GAGGATGCCATTGAGTCCAG+GGG + chr8_4:32260525-32260544 Msa1323690:CDS 55.0%
GTATGGCGACGCAATCCTGA+AGG - chr8_4:32260561-32260580 None:intergenic 55.0%
ATTGCGTCGCCATACACGCA+GGG + chr8_4:32260566-32260585 Msa1323690:CDS 55.0%
AACAAGCTCCAGCATGGAGG+TGG + chr8_4:32260792-32260811 Msa1323690:CDS 55.0%
GTGGTGAAGGTGGACAAGGT+GGG + chr8_4:32260811-32260830 Msa1323690:CDS 55.0%
AGGTGGACAAGGTGGGATAC+TGG + chr8_4:32260818-32260837 Msa1323690:CDS 55.0%
GGTGGACAAGGTGGGATACT+GGG + chr8_4:32260819-32260838 Msa1323690:CDS 55.0%
AGGTGGGATACTGGGAATGG+TGG + chr8_4:32260827-32260846 Msa1323690:CDS 55.0%
GGTGGGATACTGGGAATGGT+GGG + chr8_4:32260828-32260847 Msa1323690:CDS 55.0%
GGGATATGCAAAGCCTGCCA+TGG + chr8_4:32260899-32260918 Msa1323690:CDS 55.0%
AAAGCCTGCCATGGAGACAG+AGG + chr8_4:32260908-32260927 Msa1323690:CDS 55.0%
ACTTCCCACCTCTGTCTCCA+TGG - chr8_4:32260919-32260938 None:intergenic 55.0%
TCAAAGCGCGGTCTTCCAAG+CGG + chr8_4:32260963-32260982 Msa1323690:CDS 55.0%
CTCATCAGAATCCCACCGCT+TGG - chr8_4:32260981-32261000 None:intergenic 55.0%
AGCGGTGGGATTCTGATGAG+CGG + chr8_4:32260981-32261000 Msa1323690:CDS 55.0%
TCAGCAGATGCTTGTCCTGC+CGG + chr8_4:32261023-32261042 Msa1323690:CDS 55.0%
GCATTAGCTGCATTTCCGGC+AGG - chr8_4:32261041-32261060 None:intergenic 55.0%
CGGCTCCGTGTACGACGAAT+CGG - chr8_4:32259581-32259600 None:intergenic 60.0%
GGAGCTGGTGAGATCATCGG+AGG + chr8_4:32259630-32259649 Msa1323690:CDS 60.0%
GATTGCGTCGCCATACACGC+AGG + chr8_4:32260565-32260584 Msa1323690:CDS 60.0%
CTCCAGCATGGAGGTGGTGA+AGG + chr8_4:32260798-32260817 Msa1323690:CDS 60.0%
CACCTTCACCACCTCCATGC+TGG - chr8_4:32260803-32260822 None:intergenic 60.0%
CAGCATGGAGGTGGTGAAGG+TGG + chr8_4:32260801-32260820 Msa1323690:CDS 60.0%
GGAGGTGGTGAAGGTGGACA+AGG + chr8_4:32260807-32260826 Msa1323690:CDS 60.0%
GGTGGTGAAGGTGGACAAGG+TGG + chr8_4:32260810-32260829 Msa1323690:CDS 60.0%
CCTGCCATGGAGACAGAGGT+GGG + chr8_4:32260912-32260931 Msa1323690:CDS 60.0%
CGGCTCCGTGTACGACGAAT+CGG - chr8_4:32259581-32259600 None:intergenic 60.0%
GGAGCTGGTGAGATCATCGG+AGG + chr8_4:32259630-32259649 Msa1323690:CDS 60.0%
GATTGCGTCGCCATACACGC+AGG + chr8_4:32260565-32260584 Msa1323690:CDS 60.0%
CTCCAGCATGGAGGTGGTGA+AGG + chr8_4:32260798-32260817 Msa1323690:CDS 60.0%
CACCTTCACCACCTCCATGC+TGG - chr8_4:32260803-32260822 None:intergenic 60.0%
CAGCATGGAGGTGGTGAAGG+TGG + chr8_4:32260801-32260820 Msa1323690:CDS 60.0%
GGAGGTGGTGAAGGTGGACA+AGG + chr8_4:32260807-32260826 Msa1323690:CDS 60.0%
GGTGGTGAAGGTGGACAAGG+TGG + chr8_4:32260810-32260829 Msa1323690:CDS 60.0%
CCTGCCATGGAGACAGAGGT+GGG + chr8_4:32260912-32260931 Msa1323690:CDS 60.0%
TCGTCGTACACGGAGCCGAC+AGG + chr8_4:32259583-32259602 Msa1323690:CDS 65.0%
GCCTGCCATGGAGACAGAGG+TGG + chr8_4:32260911-32260930 Msa1323690:CDS 65.0%
CCCACCTCTGTCTCCATGGC+AGG - chr8_4:32260915-32260934 None:intergenic 65.0%
AAGCGCGGTCTTCCAAGCGG+TGG + chr8_4:32260966-32260985 Msa1323690:CDS 65.0%
AGCGCGGTCTTCCAAGCGGT+GGG + chr8_4:32260967-32260986 Msa1323690:CDS 65.0%
TCGTCGTACACGGAGCCGAC+AGG + chr8_4:32259583-32259602 Msa1323690:CDS 65.0%
GCCTGCCATGGAGACAGAGG+TGG + chr8_4:32260911-32260930 Msa1323690:CDS 65.0%
CCCACCTCTGTCTCCATGGC+AGG - chr8_4:32260915-32260934 None:intergenic 65.0%
AAGCGCGGTCTTCCAAGCGG+TGG + chr8_4:32260966-32260985 Msa1323690:CDS 65.0%
AGCGCGGTCTTCCAAGCGGT+GGG + chr8_4:32260967-32260986 Msa1323690:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 32259338 32261562 32259338 ID=Msa1323690;Name=Msa1323690
chr8_4 mRNA 32259338 32261562 32259338 ID=Msa1323690-mRNA-1;Parent=Msa1323690;Name=Msa1323690-mRNA-1;_AED=0.08;_eAED=0.08;_QI=92|1|1|1|1|1|2|330|412
chr8_4 exon 32259338 32259775 32259338 ID=Msa1323690-mRNA-1:exon:10460;Parent=Msa1323690-mRNA-1
chr8_4 exon 32260340 32261562 32260340 ID=Msa1323690-mRNA-1:exon:10461;Parent=Msa1323690-mRNA-1
chr8_4 five_prime_UTR 32259338 32259429 32259338 ID=Msa1323690-mRNA-1:five_prime_utr;Parent=Msa1323690-mRNA-1
chr8_4 CDS 32259430 32259775 32259430 ID=Msa1323690-mRNA-1:cds;Parent=Msa1323690-mRNA-1
chr8_4 CDS 32260340 32261232 32260340 ID=Msa1323690-mRNA-1:cds;Parent=Msa1323690-mRNA-1
chr8_4 three_prime_UTR 32261233 32261562 32261233 ID=Msa1323690-mRNA-1:three_prime_utr;Parent=Msa1323690-mRNA-1
Gene Sequence

>Msa1323690

ATGGCGAGAAAAGCCGTATTGATCGGAATCAACTACCCGGGAACAAAAGCAGAATTACGAGGATGCGTAAACGACGTGTGGAGGATGCACAAATGCTTGATCGAACGTTACGGTTTTTCCGAAGATGACATCACTGTTTTGATCGACACCGATTCGTCGTACACGGAGCCGACAGGAAAGAACATAAGACGTGTGTTGTCGGAGCTGGTGAGATCATCGGAGGATGGTGATCTGCTGTTTGTTCATTATAGTGGACATGGGACTCGTCTTCCTGCTGAAACCGGAGAGGATGATGATACTGGTTTTGATGAATGTATTGTTCCTTCTGATATGAATCTCATCACTGATGATGATTTCAAGGAATTTGTGGATGGGGTTCCTAGAGGATGTAGGCTGACCATTGTATCTGATTCATGCCACAGTGGTGGCTTGATTGAAGAAGCTAAGGAGCAGATAGGAGAGAGCACAAAGGGAGAAGAGGAACATTCTGGATCTGGCTTTGGATTGTCTGGCTTTCTGCATAGGAAAGTTGAGGATGCCATTGAGTCCAGGGGATTTCATGTCCCTTCAGGATTGCGTCGCCATACACGCAGGGATGAAGAAACAAATGAAGATAGGGATATCGAACTCCCACATGGAGTGAAGAATAGGTCTCTGCCACTTTCAACCCTCATTGATATACTTAAGCAGAAAACTGGGAAAGAAAATATAGATGTTGGTCAACTGAGGCCTACACTTTTTGACATTTTTGGGGAAGATGCTAGTCCTAAAGTGAAGAAGTTTATGAAAGTCATCTTGAACAAGCTCCAGCATGGAGGTGGTGAAGGTGGACAAGGTGGGATACTGGGAATGGTGGGTAGTCTTGCCCAAGAGTTTCTTAAGCAAAAGCTGAATGATAATGACGAGGGATATGCAAAGCCTGCCATGGAGACAGAGGTGGGAAGTAAGCATGAAGTATATGCTGGATCGTCAAAGCGCGGTCTTCCAAGCGGTGGGATTCTGATGAGCGGCTGTCAGACAGACCAGACTTCAGCAGATGCTTGTCCTGCCGGAAATGCAGCTAATGCTTATGGAGCTTTCAGCAATGCAATACAGGCTATAATTGAGGAGACTGATGGTGCAATTACATACTCGGAGCTTATTCTCAAGGCTAGAGCGAAGCTACAGAAAGATGGATTCACTCAAAAGCCAGGACTCTATTGCAGTGATCACCATGTTGATGATCCTTTCTTGTGCTGA

Protein sequence

>Msa1323690

MARKAVLIGINYPGTKAELRGCVNDVWRMHKCLIERYGFSEDDITVLIDTDSSYTEPTGKNIRRVLSELVRSSEDGDLLFVHYSGHGTRLPAETGEDDDTGFDECIVPSDMNLITDDDFKEFVDGVPRGCRLTIVSDSCHSGGLIEEAKEQIGESTKGEEEHSGSGFGLSGFLHRKVEDAIESRGFHVPSGLRRHTRRDEETNEDRDIELPHGVKNRSLPLSTLIDILKQKTGKENIDVGQLRPTLFDIFGEDASPKVKKFMKVILNKLQHGGGEGGQGGILGMVGSLAQEFLKQKLNDNDEGYAKPAMETEVGSKHEVYAGSSKRGLPSGGILMSGCQTDQTSADACPAGNAANAYGAFSNAIQAIIEETDGAITYSELILKARAKLQKDGFTQKPGLYCSDHHVDDPFLC*