Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033970 | XP_003625072.1 | 86.087 | 115 | 2 | 1 | 1 | 101 | 1 | 115 | 8.39e-61 | 191 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033970 | sp|Q39096|ERD15_ARATH | 52.500 | 80 | 20 | 2 | 1 | 62 | 1 | 80 | 3.55e-18 | 77.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033970 | Q2HRG8 | 86.087 | 115 | 2 | 1 | 1 | 101 | 1 | 115 | 4.01e-61 | 191 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005000 | Msa1033970 | -0.803207 | 3.892236e-49 | -8.615850e-47 |
| Msa0008840 | Msa1033970 | 0.800862 | 1.181228e-48 | -8.615850e-47 |
| Msa0010770 | Msa1033970 | 0.807195 | 5.689691e-50 | -8.615850e-47 |
| Msa0022750 | Msa1033970 | -0.809007 | 2.341250e-50 | -8.615850e-47 |
| Msa0023440 | Msa1033970 | 0.803197 | 3.909801e-49 | -8.615850e-47 |
| Msa0026910 | Msa1033970 | 0.809286 | 2.040136e-50 | -8.615850e-47 |
| Msa0027390 | Msa1033970 | 0.836835 | 7.415212e-57 | -8.615850e-47 |
| Msa0039250 | Msa1033970 | 0.824235 | 9.009167e-54 | -8.615850e-47 |
| Msa0055070 | Msa1033970 | 0.804855 | 1.767629e-49 | -8.615850e-47 |
| Msa0057750 | Msa1033970 | 0.801638 | 8.194222e-49 | -8.615850e-47 |
| Msa0065650 | Msa1033970 | 0.814280 | 1.669310e-51 | -8.615850e-47 |
| Msa0068430 | Msa1033970 | 0.804818 | 1.799516e-49 | -8.615850e-47 |
| Msa0074750 | Msa1033970 | 0.842892 | 1.959125e-58 | -8.615850e-47 |
| Msa0081650 | Msa1033970 | 0.826787 | 2.239181e-54 | -8.615850e-47 |
| Msa0084430 | Msa1033970 | 0.812150 | 4.898788e-51 | -8.615850e-47 |
| Msa0085370 | Msa1033970 | 0.800309 | 1.531378e-48 | -8.615850e-47 |
| Msa0090030 | Msa1033970 | 0.811383 | 7.195371e-51 | -8.615850e-47 |
| Msa0090550 | Msa1033970 | 0.805799 | 1.121209e-49 | -8.615850e-47 |
| Msa0092440 | Msa1033970 | 0.816788 | 4.616488e-52 | -8.615850e-47 |
| Msa0096580 | Msa1033970 | 0.806013 | 1.011102e-49 | -8.615850e-47 |
| Msa0097590 | Msa1033970 | 0.800137 | 1.659215e-48 | -8.615850e-47 |
| Msa0097610 | Msa1033970 | 0.811489 | 6.824162e-51 | -8.615850e-47 |
| Msa0098390 | Msa1033970 | -0.803771 | 2.973012e-49 | -8.615850e-47 |
| Msa0101020 | Msa1033970 | 0.807041 | 6.136152e-50 | -8.615850e-47 |
| Msa0101180 | Msa1033970 | 0.805944 | 1.044968e-49 | -8.615850e-47 |
| Msa0103070 | Msa1033970 | 0.803153 | 3.992931e-49 | -8.615850e-47 |
| Msa0103250 | Msa1033970 | 0.803517 | 3.356626e-49 | -8.615850e-47 |
| Msa0108870 | Msa1033970 | 0.802844 | 4.626095e-49 | -8.615850e-47 |
| Msa0118000 | Msa1033970 | 0.812213 | 4.747644e-51 | -8.615850e-47 |
| Msa0614510 | Msa1033970 | 0.812462 | 4.188074e-51 | -8.615850e-47 |
| Msa0617260 | Msa1033970 | 0.819127 | 1.367031e-52 | -8.615850e-47 |
| Msa0620330 | Msa1033970 | 0.815186 | 1.051719e-51 | -8.615850e-47 |
| Msa0621650 | Msa1033970 | 0.805008 | 1.642576e-49 | -8.615850e-47 |
| Msa0626220 | Msa1033970 | 0.805707 | 1.172407e-49 | -8.615850e-47 |
| Msa0628420 | Msa1033970 | 0.801864 | 7.363444e-49 | -8.615850e-47 |
| Msa0628500 | Msa1033970 | 0.800770 | 1.233013e-48 | -8.615850e-47 |
| Msa0641340 | Msa1033970 | 0.801308 | 9.573978e-49 | -8.615850e-47 |
| Msa0641730 | Msa1033970 | 0.800337 | 1.511016e-48 | -8.615850e-47 |
| Msa0652760 | Msa1033970 | 0.805171 | 1.518459e-49 | -8.615850e-47 |
| Msa0662630 | Msa1033970 | 0.802229 | 6.195240e-49 | -8.615850e-47 |
| Msa0664760 | Msa1033970 | 0.809897 | 1.507530e-50 | -8.615850e-47 |
| Msa0679550 | Msa1033970 | 0.807013 | 6.218111e-50 | -8.615850e-47 |
| Msa0682090 | Msa1033970 | 0.805505 | 1.292520e-49 | -8.615850e-47 |
| Msa0682140 | Msa1033970 | 0.810846 | 9.408685e-51 | -8.615850e-47 |
| Msa0689420 | Msa1033970 | 0.802078 | 6.654885e-49 | -8.615850e-47 |
| Msa0689760 | Msa1033970 | 0.807061 | 6.074309e-50 | -8.615850e-47 |
| Msa0715410 | Msa1033970 | 0.802215 | 6.235736e-49 | -8.615850e-47 |
| Msa0716860 | Msa1033970 | 0.820765 | 5.769075e-53 | -8.615850e-47 |
| Msa0732600 | Msa1033970 | 0.802236 | 6.174592e-49 | -8.615850e-47 |
| Msa0742510 | Msa1033970 | 0.804453 | 2.144398e-49 | -8.615850e-47 |
| Msa0743530 | Msa1033970 | 0.806230 | 9.100216e-50 | -8.615850e-47 |
| Msa0747720 | Msa1033970 | -0.802804 | 4.715632e-49 | -8.615850e-47 |
| Msa0750250 | Msa1033970 | 0.813750 | 2.184870e-51 | -8.615850e-47 |
| Msa0756930 | Msa1033970 | 0.807602 | 4.664379e-50 | -8.615850e-47 |
| Msa0757800 | Msa1033970 | 0.826300 | 2.925477e-54 | -8.615850e-47 |
| Msa0776750 | Msa1033970 | 0.837466 | 5.111681e-57 | -8.615850e-47 |
| Msa0779550 | Msa1033970 | 0.807779 | 4.278348e-50 | -8.615850e-47 |
| Msa0787150 | Msa1033970 | 0.818346 | 2.055999e-52 | -8.615850e-47 |
| Msa0799060 | Msa1033970 | 0.813593 | 2.365899e-51 | -8.615850e-47 |
| Msa0821800 | Msa1033970 | 0.814373 | 1.592094e-51 | -8.615850e-47 |
| Msa0825280 | Msa1033970 | 0.801042 | 1.085209e-48 | -8.615850e-47 |
| Msa0133720 | Msa1033970 | 0.810653 | 1.035962e-50 | -8.615850e-47 |
| Msa0133820 | Msa1033970 | 0.807133 | 5.866051e-50 | -8.615850e-47 |
| Msa0138210 | Msa1033970 | 0.821333 | 4.269677e-53 | -8.615850e-47 |
| Msa0139700 | Msa1033970 | 0.825283 | 5.101099e-54 | -8.615850e-47 |
| Msa0142460 | Msa1033970 | 0.809947 | 1.470842e-50 | -8.615850e-47 |
| Msa0143850 | Msa1033970 | 0.803769 | 2.976596e-49 | -8.615850e-47 |
| Msa0145070 | Msa1033970 | 0.804821 | 1.797336e-49 | -8.615850e-47 |
| Msa0145150 | Msa1033970 | 0.813929 | 1.995924e-51 | -8.615850e-47 |
| Msa0146080 | Msa1033970 | 0.807960 | 3.915147e-50 | -8.615850e-47 |
| Msa0160670 | Msa1033970 | 0.803992 | 2.674420e-49 | -8.615850e-47 |
| Msa0165300 | Msa1033970 | 0.834259 | 3.323030e-56 | -8.615850e-47 |
| Msa0176330 | Msa1033970 | 0.814613 | 1.408892e-51 | -8.615850e-47 |
| Msa0178510 | Msa1033970 | 0.810913 | 9.097490e-51 | -8.615850e-47 |
| Msa0183420 | Msa1033970 | 0.816578 | 5.146088e-52 | -8.615850e-47 |
| Msa0183870 | Msa1033970 | 0.819426 | 1.168715e-52 | -8.615850e-47 |
| Msa0185510 | Msa1033970 | 0.805809 | 1.115756e-49 | -8.615850e-47 |
| Msa0196340 | Msa1033970 | 0.808337 | 3.254428e-50 | -8.615850e-47 |
| Msa0202930 | Msa1033970 | 0.834528 | 2.844578e-56 | -8.615850e-47 |
| Msa0207350 | Msa1033970 | 0.806498 | 7.990847e-50 | -8.615850e-47 |
| Msa0208810 | Msa1033970 | 0.808009 | 3.823198e-50 | -8.615850e-47 |
| Msa0218350 | Msa1033970 | 0.820898 | 5.378759e-53 | -8.615850e-47 |
| Msa0227230 | Msa1033970 | 0.800588 | 1.343484e-48 | -8.615850e-47 |
| Msa0236070 | Msa1033970 | 0.831085 | 2.038653e-55 | -8.615850e-47 |
| Msa0238230 | Msa1033970 | 0.815350 | 9.668295e-52 | -8.615850e-47 |
| Msa0387050 | Msa1033970 | 0.803678 | 3.108452e-49 | -8.615850e-47 |
| Msa0387370 | Msa1033970 | 0.804454 | 2.143821e-49 | -8.615850e-47 |
| Msa0387880 | Msa1033970 | -0.812024 | 5.220291e-51 | -8.615850e-47 |
| Msa0392200 | Msa1033970 | 0.832737 | 7.969573e-56 | -8.615850e-47 |
| Msa0410300 | Msa1033970 | 0.813393 | 2.618948e-51 | -8.615850e-47 |
| Msa0422180 | Msa1033970 | 0.825400 | 4.785062e-54 | -8.615850e-47 |
| Msa0428050 | Msa1033970 | 0.814622 | 1.403065e-51 | -8.615850e-47 |
| Msa0437400 | Msa1033970 | 0.807575 | 4.726550e-50 | -8.615850e-47 |
| Msa0439890 | Msa1033970 | 0.825960 | 3.524456e-54 | -8.615850e-47 |
| Msa0442310 | Msa1033970 | 0.802630 | 5.121782e-49 | -8.615850e-47 |
| Msa0455740 | Msa1033970 | 0.835600 | 1.527292e-56 | -8.615850e-47 |
| Msa0461590 | Msa1033970 | 0.827697 | 1.355928e-54 | -8.615850e-47 |
| Msa0465960 | Msa1033970 | 0.800185 | 1.622773e-48 | -8.615850e-47 |
| Msa0994390 | Msa1033970 | 0.804733 | 1.875200e-49 | -8.615850e-47 |
| Msa1000930 | Msa1033970 | 0.812852 | 3.442092e-51 | -8.615850e-47 |
| Msa1001080 | Msa1033970 | 0.804496 | 2.100561e-49 | -8.615850e-47 |
| Msa1004420 | Msa1033970 | 0.809331 | 1.994594e-50 | -8.615850e-47 |
| Msa1008750 | Msa1033970 | 0.811878 | 5.617362e-51 | -8.615850e-47 |
| Msa1010070 | Msa1033970 | 0.818043 | 2.407866e-52 | -8.615850e-47 |
| Msa1025260 | Msa1033970 | 0.801623 | 8.252692e-49 | -8.615850e-47 |
| Msa1028590 | Msa1033970 | 0.807774 | 4.288596e-50 | -8.615850e-47 |
| Msa1031820 | Msa1033970 | 0.818511 | 1.887017e-52 | -8.615850e-47 |
| Msa1032170 | Msa1033970 | 0.838547 | 2.695018e-57 | -8.615850e-47 |
| Msa1033970 | Msa1040520 | 0.807422 | 5.093444e-50 | -8.615850e-47 |
| Msa1033970 | Msa1040840 | 0.803607 | 3.215048e-49 | -8.615850e-47 |
| Msa1033970 | Msa1048750 | -0.808292 | 3.327997e-50 | -8.615850e-47 |
| Msa1033970 | Msa1063420 | 0.808103 | 3.649867e-50 | -8.615850e-47 |
| Msa1033970 | Msa1070690 | 0.827821 | 1.265759e-54 | -8.615850e-47 |
| Msa1033970 | Msa1071660 | 0.814567 | 1.442937e-51 | -8.615850e-47 |
| Msa1033970 | Msa1073830 | 0.917994 | 2.692197e-86 | -8.615850e-47 |
| Msa1033970 | Msa1077340 | 0.800208 | 1.605436e-48 | -8.615850e-47 |
| Msa1033970 | Msa1096550 | 0.818802 | 1.620375e-52 | -8.615850e-47 |
| Msa1033970 | Msa1098290 | 0.813488 | 2.495888e-51 | -8.615850e-47 |
| Msa1033970 | Msa1100520 | -0.801829 | 7.485066e-49 | -8.615850e-47 |
| Msa1033970 | Msa1109350 | 0.803113 | 4.070232e-49 | -8.615850e-47 |
| Msa1033970 | Msa1111700 | 0.803897 | 2.799374e-49 | -8.615850e-47 |
| Msa1033970 | Msa1113010 | 0.822265 | 2.597693e-53 | -8.615850e-47 |
| Msa1033970 | Msa1113590 | 0.831065 | 2.061189e-55 | -8.615850e-47 |
| Msa1033970 | Msa1115280 | 0.813278 | 2.774989e-51 | -8.615850e-47 |
| Msa1033970 | Msa1118710 | 0.807255 | 5.527493e-50 | -8.615850e-47 |
| Msa1033970 | Msa1118760 | 0.811469 | 6.893632e-51 | -8.615850e-47 |
| Msa1033970 | Msa1127430 | 0.811507 | 6.764520e-51 | -8.615850e-47 |
| Msa1033970 | Msa1127770 | 0.823869 | 1.098006e-53 | -8.615850e-47 |
| Msa1033970 | Msa1138320 | 0.807353 | 5.268867e-50 | -8.615850e-47 |
| Msa1033970 | Msa1143020 | 0.822663 | 2.099784e-53 | -8.615850e-47 |
| Msa1033970 | Msa1144970 | 0.811715 | 6.094043e-51 | -8.615850e-47 |
| Msa1033970 | Msa1158770 | 0.832740 | 7.957171e-56 | -8.615850e-47 |
| Msa1033970 | Msa1169720 | 0.830247 | 3.270282e-55 | -8.615850e-47 |
| Msa1033970 | Msa1177780 | 0.801526 | 8.636873e-49 | -8.615850e-47 |
| Msa1033970 | Msa1190970 | 0.808751 | 2.655562e-50 | -8.615850e-47 |
| Msa1033970 | Msa1199710 | 0.805762 | 1.141547e-49 | -8.615850e-47 |
| Msa1033970 | Msa1214320 | 0.802133 | 6.481384e-49 | -8.615850e-47 |
| Msa1033970 | Msa1218580 | 0.804641 | 1.959589e-49 | -8.615850e-47 |
| Msa1033970 | Msa1258370 | 0.810033 | 1.409634e-50 | -8.615850e-47 |
| Msa1033970 | Msa1259640 | 0.800687 | 1.282137e-48 | -8.615850e-47 |
| Msa1033970 | Msa1273120 | 0.821688 | 3.534203e-53 | -8.615850e-47 |
| Msa1033970 | Msa1276340 | 0.824864 | 6.406599e-54 | -8.615850e-47 |
| Msa1033970 | Msa1286550 | 0.829538 | 4.867018e-55 | -8.615850e-47 |
| Msa1033970 | Msa1288450 | 0.811918 | 5.504937e-51 | -8.615850e-47 |
| Msa1033970 | Msa1294960 | 0.808986 | 2.365433e-50 | -8.615850e-47 |
| Msa1033970 | Msa1296300 | 0.813786 | 2.145566e-51 | -8.615850e-47 |
| Msa1033970 | Msa1307550 | 0.843265 | 1.558779e-58 | -8.615850e-47 |
| Msa1033970 | Msa1329670 | 0.805149 | 1.534867e-49 | -8.615850e-47 |
| Msa1033970 | Msa1336040 | 0.801047 | 1.082317e-48 | -8.615850e-47 |
| Msa1033970 | Msa1338830 | 0.819018 | 1.447144e-52 | -8.615850e-47 |
| Msa1033970 | Msa1339190 | 0.806460 | 8.136851e-50 | -8.615850e-47 |
| Msa1033970 | Msa1340040 | -0.820028 | 8.517223e-53 | -8.615850e-47 |
| Msa1033970 | Msa1340830 | 0.822303 | 2.546273e-53 | -8.615850e-47 |
| Msa1033970 | Msa1346750 | 0.812258 | 4.640732e-51 | -8.615850e-47 |
| Msa1033970 | Msa1363700 | 0.809126 | 2.207074e-50 | -8.615850e-47 |
| Msa1033970 | Msa1366300 | 0.800504 | 1.396952e-48 | -8.615850e-47 |
| Msa1033970 | Msa1372150 | 0.801281 | 9.697384e-49 | -8.615850e-47 |
| Msa1033970 | Msa1373880 | 0.804056 | 2.594522e-49 | -8.615850e-47 |
| Msa1033970 | Msa1385350 | 0.815719 | 8.004919e-52 | -8.615850e-47 |
| Msa1033970 | Msa1396780 | 0.800263 | 1.564277e-48 | -8.615850e-47 |
| Msa1033970 | Msa1400120 | 0.805178 | 1.512892e-49 | -8.615850e-47 |
| Msa1033970 | Msa1418260 | 0.800997 | 1.108241e-48 | -8.615850e-47 |
| Msa1033970 | Msa1420250 | 0.807147 | 5.825871e-50 | -8.615850e-47 |
| Msa1033970 | Msa1422840 | 0.854635 | 1.079708e-61 | -8.615850e-47 |
| Msa1033970 | Msa1433220 | 0.818593 | 1.808112e-52 | -8.615850e-47 |
| Msa1033970 | Msa1436600 | 0.806812 | 6.858027e-50 | -8.615850e-47 |
| Msa1033970 | Msa1439710 | 0.812344 | 4.443990e-51 | -8.615850e-47 |
| Msa1033970 | Msa1458030 | 0.820214 | 7.719759e-53 | -8.615850e-47 |
| Msa0241740 | Msa1033970 | 0.810431 | 1.156441e-50 | -8.615850e-47 |
| Msa0259160 | Msa1033970 | 0.819040 | 1.431184e-52 | -8.615850e-47 |
| Msa0269520 | Msa1033970 | 0.821019 | 5.043114e-53 | -8.615850e-47 |
| Msa0277420 | Msa1033970 | 0.817015 | 4.104547e-52 | -8.615850e-47 |
| Msa0288730 | Msa1033970 | 0.801116 | 1.047890e-48 | -8.615850e-47 |
| Msa0313930 | Msa1033970 | 0.818449 | 1.948890e-52 | -8.615850e-47 |
| Msa0314060 | Msa1033970 | 0.800500 | 1.399845e-48 | -8.615850e-47 |
| Msa0322680 | Msa1033970 | 0.809667 | 1.689845e-50 | -8.615850e-47 |
| Msa0346990 | Msa1033970 | 0.828794 | 7.373853e-55 | -8.615850e-47 |
| Msa0347950 | Msa1033970 | 0.803710 | 3.061129e-49 | -8.615850e-47 |
| Msa0347990 | Msa1033970 | 0.818185 | 2.236414e-52 | -8.615850e-47 |
| Msa0487780 | Msa1033970 | 0.819684 | 1.020449e-52 | -8.615850e-47 |
| Msa0506790 | Msa1033970 | 0.818074 | 2.370170e-52 | -8.615850e-47 |
| Msa0506800 | Msa1033970 | 0.803758 | 2.992555e-49 | -8.615850e-47 |
| Msa0510290 | Msa1033970 | 0.832060 | 1.172666e-55 | -8.615850e-47 |
| Msa0517090 | Msa1033970 | 0.846320 | 2.339034e-59 | -8.615850e-47 |
| Msa0518440 | Msa1033970 | 0.810789 | 9.678243e-51 | -8.615850e-47 |
| Msa0524600 | Msa1033970 | 0.803413 | 3.528113e-49 | -8.615850e-47 |
| Msa0537770 | Msa1033970 | 0.802549 | 5.321690e-49 | -8.615850e-47 |
| Msa0556010 | Msa1033970 | 0.803708 | 3.063895e-49 | -8.615850e-47 |
| Msa0560500 | Msa1033970 | 0.812149 | 4.901889e-51 | -8.615850e-47 |
| Msa0573040 | Msa1033970 | 0.805536 | 1.273394e-49 | -8.615850e-47 |
| Msa0576680 | Msa1033970 | 0.805337 | 1.401402e-49 | -8.615850e-47 |
| Msa0576890 | Msa1033970 | 0.821065 | 4.921852e-53 | -8.615850e-47 |
| Msa0578090 | Msa1033970 | 0.819478 | 1.137244e-52 | -8.615850e-47 |
| Msa0583500 | Msa1033970 | 0.817866 | 2.640824e-52 | -8.615850e-47 |
| Msa0584550 | Msa1033970 | 0.809326 | 1.999486e-50 | -8.615850e-47 |
| Msa0586850 | Msa1033970 | 0.811334 | 7.375989e-51 | -8.615850e-47 |
| Msa0587190 | Msa1033970 | 0.802332 | 5.899115e-49 | -8.615850e-47 |
| Msa0588090 | Msa1033970 | 0.802781 | 4.766747e-49 | -8.615850e-47 |
| Msa0588120 | Msa1033970 | 0.800653 | 1.303171e-48 | -8.615850e-47 |
| Msa0588220 | Msa1033970 | 0.803985 | 2.683966e-49 | -8.615850e-47 |
| Msa0594200 | Msa1033970 | 0.810576 | 1.076152e-50 | -8.615850e-47 |
| Msa0595600 | Msa1033970 | 0.806429 | 8.262538e-50 | -8.615850e-47 |
| Msa0597000 | Msa1033970 | 0.811735 | 6.032994e-51 | -8.615850e-47 |
| Msa0844230 | Msa1033970 | 0.820730 | 5.877880e-53 | -8.615850e-47 |
| Msa0849810 | Msa1033970 | 0.803025 | 4.243521e-49 | -8.615850e-47 |
| Msa0857300 | Msa1033970 | 0.830035 | 3.684644e-55 | -8.615850e-47 |
| Msa0861830 | Msa1033970 | 0.822604 | 2.167442e-53 | -8.615850e-47 |
| Msa0866400 | Msa1033970 | 0.807283 | 5.451560e-50 | -8.615850e-47 |
| Msa0877710 | Msa1033970 | 0.815129 | 1.082659e-51 | -8.615850e-47 |
| Msa0879860 | Msa1033970 | 0.802678 | 5.005119e-49 | -8.615850e-47 |
| Msa0880810 | Msa1033970 | 0.804536 | 2.061157e-49 | -8.615850e-47 |
| Msa0924310 | Msa1033970 | 0.805768 | 1.138075e-49 | -8.615850e-47 |
| Msa0947530 | Msa1033970 | -0.813545 | 2.424483e-51 | -8.615850e-47 |
| Msa0957870 | Msa1033970 | 0.802956 | 4.385743e-49 | -8.615850e-47 |
| Msa0957970 | Msa1033970 | 0.811568 | 6.558521e-51 | -8.615850e-47 |
| Msa0959010 | Msa1033970 | 0.803224 | 3.859656e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033970 | MtrunA17_Chr7g0256851 | 86.087 | 115 | 2 | 1 | 1 | 101 | 1 | 115 | 7.72e-65 | 191 |
| Msa1033970 | MtrunA17_Chr3g0085831 | 44.231 | 104 | 42 | 3 | 1 | 88 | 1 | 104 | 1.47e-20 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1033970 | AT2G41430.5 | 52.500 | 80 | 20 | 2 | 1 | 62 | 1 | 80 | 3.61e-19 | 77.4 |
| Msa1033970 | AT2G41430.4 | 52.500 | 80 | 20 | 2 | 1 | 62 | 1 | 80 | 3.61e-19 | 77.4 |
| Msa1033970 | AT2G41430.2 | 52.500 | 80 | 20 | 2 | 1 | 62 | 1 | 80 | 3.61e-19 | 77.4 |
| Msa1033970 | AT2G41430.1 | 52.500 | 80 | 20 | 2 | 1 | 62 | 1 | 80 | 3.61e-19 | 77.4 |
| Msa1033970 | AT2G41430.3 | 52.500 | 80 | 20 | 2 | 1 | 62 | 1 | 80 | 4.89e-19 | 75.9 |
Find 34 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGACAGGTAAGAAAGTTTA+TGG | 0.140300 | 7_1:+69366361 | None:intergenic |
| TTTCTTACCTGTCTTCAAAA+TGG | 0.243639 | 7_1:-69366353 | Msa1033970:three_prime_UTR |
| ATTGGTCAATTGATTGCTTC+TGG | 0.249156 | 7_1:+69366254 | None:intergenic |
| TTCAAGATGGCATTAGTTTC+AGG | 0.269984 | 7_1:-69367121 | None:intergenic |
| TTCCTTCTTACCAAAATCTA+TGG | 0.308472 | 7_1:-69366513 | Msa1033970:three_prime_UTR |
| CTTTCTGTAACTTCTTGTAT+AGG | 0.333956 | 7_1:-69366557 | Msa1033970:three_prime_UTR |
| GGAATGTAAAGTGGTGCATT+AGG | 0.338731 | 7_1:+69367079 | None:intergenic |
| GACGGTCTTGCCTTAGCTTT+CGG | 0.365977 | 7_1:-69366611 | Msa1033970:three_prime_UTR |
| CAAGGAGCAAAGAAATTTAC+TGG | 0.372256 | 7_1:-69366683 | Msa1033970:CDS |
| AGTAAGTTTATTATTACAAT+TGG | 0.386330 | 7_1:+69366236 | None:intergenic |
| GTCACCAGCTGCCACCATTC+CGG | 0.393504 | 7_1:+69367025 | None:intergenic |
| ACCGTCGCATTCAGCGTCTA+TGG | 0.413218 | 7_1:+69366628 | None:intergenic |
| GAATGTAAAGTGGTGCATTA+GGG | 0.425842 | 7_1:+69367080 | None:intergenic |
| AGACAGGTAAGAAAGTTTAT+GGG | 0.447864 | 7_1:+69366362 | None:intergenic |
| TTCTCCGGAATGGTGGCAGC+TGG | 0.463269 | 7_1:-69367029 | Msa1033970:intron |
| GCTTCTGGACATGTATTGTA+TGG | 0.492883 | 7_1:+69366269 | None:intergenic |
| GCATCAAGATCAAACGCATC+AGG | 0.498917 | 7_1:+69366896 | None:intergenic |
| ATTTACTGGATGAGCTAAAG+AGG | 0.519766 | 7_1:-69366669 | Msa1033970:exon |
| TGTAACTTCTTGTATAGGCA+AGG | 0.531546 | 7_1:-69366552 | Msa1033970:three_prime_UTR |
| TGACAGAACTCAGAAGTGTA+TGG | 0.537723 | 7_1:-69366304 | Msa1033970:three_prime_UTR |
| TCGACATAACGAAATGCAGC+TGG | 0.542944 | 7_1:+69367058 | None:intergenic |
| GATGATGTAGATGAGTTTGA+CGG | 0.549584 | 7_1:-69366941 | Msa1033970:CDS |
| AGCTGCATTTCGTTATGTCG+AGG | 0.550315 | 7_1:-69367056 | Msa1033970:CDS |
| AGCCAGCAACATGATGATGA+AGG | 0.556932 | 7_1:-69366971 | Msa1033970:intron |
| AGCTAAATAACCGAAAGCTA+AGG | 0.582950 | 7_1:+69366601 | None:intergenic |
| ACCATAGACGCTGAATGCGA+CGG | 0.583100 | 7_1:-69366629 | Msa1033970:three_prime_UTR |
| AGAGTTTATCAAGTCTTCTG+AGG | 0.595138 | 7_1:-69366840 | Msa1033970:CDS |
| ATCAAGTCTTCTGAGGCACA+AGG | 0.619098 | 7_1:-69366833 | Msa1033970:intron |
| AAATCTATGGTAAAATAGAG+AGG | 0.627618 | 7_1:-69366500 | Msa1033970:three_prime_UTR |
| AAGATGGCATTAGTTTCAGG+AGG | 0.635369 | 7_1:-69367118 | Msa1033970:CDS |
| TGATGCGTTTGATCTTGATG+CGG | 0.644823 | 7_1:-69366894 | Msa1033970:CDS |
| TATAACAGCTCTTACAACAT+CGG | 0.657333 | 7_1:+69366441 | None:intergenic |
| AATGCAGCTGGAATGTAAAG+TGG | 0.671808 | 7_1:+69367070 | None:intergenic |
| ACAGAAAGTTAAAACTGACA+TGG | 0.696360 | 7_1:+69366572 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTTTCCTCTGAAAAATAA+CGG | + | chr7_1:69366642-69366661 | None:intergenic | 25.0% |
| !! | CTCTATTTTACCATAGATTT+TGG | + | chr7_1:69366853-69366872 | None:intergenic | 25.0% |
| ! | AAATCTATGGTAAAATAGAG+AGG | - | chr7_1:69366853-69366872 | Msa1033970:CDS | 25.0% |
| !! | AACTTTCCTCTGAAAAATAA+CGG | + | chr7_1:69366642-69366661 | None:intergenic | 25.0% |
| !! | CTCTATTTTACCATAGATTT+TGG | + | chr7_1:69366853-69366872 | None:intergenic | 25.0% |
| ! | AAATCTATGGTAAAATAGAG+AGG | - | chr7_1:69366853-69366872 | Msa1033970:CDS | 25.0% |
| !!! | AACATACCGTTATTTTTCAG+AGG | - | chr7_1:69366633-69366652 | Msa1033970:three_prime_UTR | 30.0% |
| !! | TTTTTCAGAGGAAAGTTTTG+TGG | - | chr7_1:69366645-69366664 | Msa1033970:three_prime_UTR | 30.0% |
| ACAGAAAGTTAAAACTGACA+TGG | + | chr7_1:69366784-69366803 | None:intergenic | 30.0% | |
| CTTTCTGTAACTTCTTGTAT+AGG | - | chr7_1:69366796-69366815 | Msa1033970:intron | 30.0% | |
| TTCCTTCTTACCAAAATCTA+TGG | - | chr7_1:69366840-69366859 | Msa1033970:CDS | 30.0% | |
| !! | TACCATAGATTTTGGTAAGA+AGG | + | chr7_1:69366845-69366864 | None:intergenic | 30.0% |
| TATAACAGCTCTTACAACAT+CGG | + | chr7_1:69366915-69366934 | None:intergenic | 30.0% | |
| AGACAGGTAAGAAAGTTTAT+GGG | + | chr7_1:69366994-69367013 | None:intergenic | 30.0% | |
| AAGACAGGTAAGAAAGTTTA+TGG | + | chr7_1:69366995-69367014 | None:intergenic | 30.0% | |
| TTTCTTACCTGTCTTCAAAA+TGG | - | chr7_1:69367000-69367019 | Msa1033970:intron | 30.0% | |
| !!! | AACATACCGTTATTTTTCAG+AGG | - | chr7_1:69366633-69366652 | Msa1033970:three_prime_UTR | 30.0% |
| !! | TTTTTCAGAGGAAAGTTTTG+TGG | - | chr7_1:69366645-69366664 | Msa1033970:three_prime_UTR | 30.0% |
| ACAGAAAGTTAAAACTGACA+TGG | + | chr7_1:69366784-69366803 | None:intergenic | 30.0% | |
| CTTTCTGTAACTTCTTGTAT+AGG | - | chr7_1:69366796-69366815 | Msa1033970:intron | 30.0% | |
| TTCCTTCTTACCAAAATCTA+TGG | - | chr7_1:69366840-69366859 | Msa1033970:CDS | 30.0% | |
| !! | TACCATAGATTTTGGTAAGA+AGG | + | chr7_1:69366845-69366864 | None:intergenic | 30.0% |
| TATAACAGCTCTTACAACAT+CGG | + | chr7_1:69366915-69366934 | None:intergenic | 30.0% | |
| AGACAGGTAAGAAAGTTTAT+GGG | + | chr7_1:69366994-69367013 | None:intergenic | 30.0% | |
| AAGACAGGTAAGAAAGTTTA+TGG | + | chr7_1:69366995-69367014 | None:intergenic | 30.0% | |
| TTTCTTACCTGTCTTCAAAA+TGG | - | chr7_1:69367000-69367019 | Msa1033970:intron | 30.0% | |
| GAATGTAAAGTGGTGCATTA+GGG | + | chr7_1:69366276-69366295 | None:intergenic | 35.0% | |
| ! | TTATGTCGAGGATTTTTCTC+CGG | - | chr7_1:69366309-69366328 | Msa1033970:three_prime_UTR | 35.0% |
| GATGATGTAGATGAGTTTGA+CGG | - | chr7_1:69366412-69366431 | Msa1033970:three_prime_UTR | 35.0% | |
| AGAGTTTATCAAGTCTTCTG+AGG | - | chr7_1:69366513-69366532 | Msa1033970:three_prime_UTR | 35.0% | |
| CAAGGAGCAAAGAAATTTAC+TGG | - | chr7_1:69366670-69366689 | Msa1033970:exon | 35.0% | |
| ATTTACTGGATGAGCTAAAG+AGG | - | chr7_1:69366684-69366703 | Msa1033970:CDS | 35.0% | |
| AGCTAAATAACCGAAAGCTA+AGG | + | chr7_1:69366755-69366774 | None:intergenic | 35.0% | |
| TGTAACTTCTTGTATAGGCA+AGG | - | chr7_1:69366801-69366820 | Msa1033970:intron | 35.0% | |
| !! | AATGCATCCATTTTGAAGAC+AGG | + | chr7_1:69367010-69367029 | None:intergenic | 35.0% |
| ATTGGTCAATTGATTGCTTC+TGG | + | chr7_1:69367102-69367121 | None:intergenic | 35.0% | |
| GAATGTAAAGTGGTGCATTA+GGG | + | chr7_1:69366276-69366295 | None:intergenic | 35.0% | |
| ! | TTATGTCGAGGATTTTTCTC+CGG | - | chr7_1:69366309-69366328 | Msa1033970:three_prime_UTR | 35.0% |
| GATGATGTAGATGAGTTTGA+CGG | - | chr7_1:69366412-69366431 | Msa1033970:three_prime_UTR | 35.0% | |
| AGAGTTTATCAAGTCTTCTG+AGG | - | chr7_1:69366513-69366532 | Msa1033970:three_prime_UTR | 35.0% | |
| CAAGGAGCAAAGAAATTTAC+TGG | - | chr7_1:69366670-69366689 | Msa1033970:exon | 35.0% | |
| ATTTACTGGATGAGCTAAAG+AGG | - | chr7_1:69366684-69366703 | Msa1033970:CDS | 35.0% | |
| AGCTAAATAACCGAAAGCTA+AGG | + | chr7_1:69366755-69366774 | None:intergenic | 35.0% | |
| TGTAACTTCTTGTATAGGCA+AGG | - | chr7_1:69366801-69366820 | Msa1033970:intron | 35.0% | |
| !! | AATGCATCCATTTTGAAGAC+AGG | + | chr7_1:69367010-69367029 | None:intergenic | 35.0% |
| ATTGGTCAATTGATTGCTTC+TGG | + | chr7_1:69367102-69367121 | None:intergenic | 35.0% | |
| GGAATGTAAAGTGGTGCATT+AGG | + | chr7_1:69366277-69366296 | None:intergenic | 40.0% | |
| AATGCAGCTGGAATGTAAAG+TGG | + | chr7_1:69366286-69366305 | None:intergenic | 40.0% | |
| TGATGCGTTTGATCTTGATG+CGG | - | chr7_1:69366459-69366478 | Msa1033970:three_prime_UTR | 40.0% | |
| ! | TGACAGAACTCAGAAGTGTA+TGG | - | chr7_1:69367049-69367068 | Msa1033970:CDS | 40.0% |
| GCTTCTGGACATGTATTGTA+TGG | + | chr7_1:69367087-69367106 | None:intergenic | 40.0% | |
| GGAATGTAAAGTGGTGCATT+AGG | + | chr7_1:69366277-69366296 | None:intergenic | 40.0% | |
| AATGCAGCTGGAATGTAAAG+TGG | + | chr7_1:69366286-69366305 | None:intergenic | 40.0% | |
| TGATGCGTTTGATCTTGATG+CGG | - | chr7_1:69366459-69366478 | Msa1033970:three_prime_UTR | 40.0% | |
| ! | TGACAGAACTCAGAAGTGTA+TGG | - | chr7_1:69367049-69367068 | Msa1033970:CDS | 40.0% |
| GCTTCTGGACATGTATTGTA+TGG | + | chr7_1:69367087-69367106 | None:intergenic | 40.0% | |
| TCGACATAACGAAATGCAGC+TGG | + | chr7_1:69366298-69366317 | None:intergenic | 45.0% | |
| AGCTGCATTTCGTTATGTCG+AGG | - | chr7_1:69366297-69366316 | Msa1033970:three_prime_UTR | 45.0% | |
| ! | TCGAGGATTTTTCTCCGGAA+TGG | - | chr7_1:69366314-69366333 | Msa1033970:three_prime_UTR | 45.0% |
| ! | AGGATTTTTCTCCGGAATGG+TGG | - | chr7_1:69366317-69366336 | Msa1033970:three_prime_UTR | 45.0% |
| AGCTGGTGACAACACTGAAA+TGG | - | chr7_1:69366341-69366360 | Msa1033970:three_prime_UTR | 45.0% | |
| GCTGGCTAAGTCAGTAATCA+TGG | + | chr7_1:69366369-69366388 | None:intergenic | 45.0% | |
| ! | AGCCAGCAACATGATGATGA+AGG | - | chr7_1:69366382-69366401 | Msa1033970:three_prime_UTR | 45.0% |
| AGCCTTCATCATCATGTTGC+TGG | + | chr7_1:69366387-69366406 | None:intergenic | 45.0% | |
| GCATCAAGATCAAACGCATC+AGG | + | chr7_1:69366460-69366479 | None:intergenic | 45.0% | |
| !! | ATCAAGTCTTCTGAGGCACA+AGG | - | chr7_1:69366520-69366539 | Msa1033970:three_prime_UTR | 45.0% |
| !! | GAGGAAAGTTTTGTGGAGCA+AGG | - | chr7_1:69366652-69366671 | Msa1033970:three_prime_UTR | 45.0% |
| TCGACATAACGAAATGCAGC+TGG | + | chr7_1:69366298-69366317 | None:intergenic | 45.0% | |
| AGCTGCATTTCGTTATGTCG+AGG | - | chr7_1:69366297-69366316 | Msa1033970:three_prime_UTR | 45.0% | |
| ! | TCGAGGATTTTTCTCCGGAA+TGG | - | chr7_1:69366314-69366333 | Msa1033970:three_prime_UTR | 45.0% |
| ! | AGGATTTTTCTCCGGAATGG+TGG | - | chr7_1:69366317-69366336 | Msa1033970:three_prime_UTR | 45.0% |
| AGCTGGTGACAACACTGAAA+TGG | - | chr7_1:69366341-69366360 | Msa1033970:three_prime_UTR | 45.0% | |
| GCTGGCTAAGTCAGTAATCA+TGG | + | chr7_1:69366369-69366388 | None:intergenic | 45.0% | |
| ! | AGCCAGCAACATGATGATGA+AGG | - | chr7_1:69366382-69366401 | Msa1033970:three_prime_UTR | 45.0% |
| AGCCTTCATCATCATGTTGC+TGG | + | chr7_1:69366387-69366406 | None:intergenic | 45.0% | |
| GCATCAAGATCAAACGCATC+AGG | + | chr7_1:69366460-69366479 | None:intergenic | 45.0% | |
| !! | ATCAAGTCTTCTGAGGCACA+AGG | - | chr7_1:69366520-69366539 | Msa1033970:three_prime_UTR | 45.0% |
| !! | GAGGAAAGTTTTGTGGAGCA+AGG | - | chr7_1:69366652-69366671 | Msa1033970:three_prime_UTR | 45.0% |
| ACCATAGACGCTGAATGCGA+CGG | - | chr7_1:69366724-69366743 | Msa1033970:intron | 50.0% | |
| ! | GACGGTCTTGCCTTAGCTTT+CGG | - | chr7_1:69366742-69366761 | Msa1033970:intron | 50.0% |
| ACCATAGACGCTGAATGCGA+CGG | - | chr7_1:69366724-69366743 | Msa1033970:intron | 50.0% | |
| ! | GACGGTCTTGCCTTAGCTTT+CGG | - | chr7_1:69366742-69366761 | Msa1033970:intron | 50.0% |
| ACCGTCGCATTCAGCGTCTA+TGG | + | chr7_1:69366728-69366747 | None:intergenic | 55.0% | |
| ACCGTCGCATTCAGCGTCTA+TGG | + | chr7_1:69366728-69366747 | None:intergenic | 55.0% | |
| TTCTCCGGAATGGTGGCAGC+TGG | - | chr7_1:69366324-69366343 | Msa1033970:three_prime_UTR | 60.0% | |
| GTCACCAGCTGCCACCATTC+CGG | + | chr7_1:69366331-69366350 | None:intergenic | 60.0% | |
| TTCTCCGGAATGGTGGCAGC+TGG | - | chr7_1:69366324-69366343 | Msa1033970:three_prime_UTR | 60.0% | |
| GTCACCAGCTGCCACCATTC+CGG | + | chr7_1:69366331-69366350 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 69366238 | 69367137 | 69366238 | ID=Msa1033970;Name=Msa1033970 |
| chr7_1 | mRNA | 69366238 | 69367137 | 69366238 | ID=Msa1033970-mRNA-1;Parent=Msa1033970;Name=Msa1033970-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.5|0.33|1|1|1|3|441|101 |
| chr7_1 | exon | 69366238 | 69366722 | 69366238 | ID=Msa1033970-mRNA-1:exon:16285;Parent=Msa1033970-mRNA-1 |
| chr7_1 | exon | 69366834 | 69366987 | 69366834 | ID=Msa1033970-mRNA-1:exon:16284;Parent=Msa1033970-mRNA-1 |
| chr7_1 | exon | 69367030 | 69367137 | 69367030 | ID=Msa1033970-mRNA-1:exon:16283;Parent=Msa1033970-mRNA-1 |
| chr7_1 | CDS | 69367030 | 69367137 | 69367030 | ID=Msa1033970-mRNA-1:cds;Parent=Msa1033970-mRNA-1 |
| chr7_1 | CDS | 69366834 | 69366987 | 69366834 | ID=Msa1033970-mRNA-1:cds;Parent=Msa1033970-mRNA-1 |
| chr7_1 | CDS | 69366679 | 69366722 | 69366679 | ID=Msa1033970-mRNA-1:cds;Parent=Msa1033970-mRNA-1 |
| chr7_1 | three_prime_UTR | 69366238 | 69366678 | 69366238 | ID=Msa1033970-mRNA-1:three_prime_utr;Parent=Msa1033970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
