Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0598260 | XP_013442451.1 | 93.532 | 402 | 18 | 5 | 5 | 401 | 6 | 404 | 0.0 | 722 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0598260 | sp|Q9LF50|MEX1_ARATH | 68.155 | 336 | 101 | 1 | 69 | 398 | 79 | 414 | 2.04e-164 | 470 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033050 | Msa0598260 | 0.816023 | 6.847570e-52 | -8.615850e-47 |
| Msa0045660 | Msa0598260 | 0.825364 | 4.881209e-54 | -8.615850e-47 |
| Msa0046360 | Msa0598260 | 0.809336 | 1.990106e-50 | -8.615850e-47 |
| Msa0072910 | Msa0598260 | 0.800282 | 1.550569e-48 | -8.615850e-47 |
| Msa0105600 | Msa0598260 | 0.809312 | 2.013765e-50 | -8.615850e-47 |
| Msa0208400 | Msa0598260 | 0.807114 | 5.919340e-50 | -8.615850e-47 |
| Msa0208560 | Msa0598260 | 0.803344 | 3.646523e-49 | -8.615850e-47 |
| Msa0467710 | Msa0598260 | 0.817357 | 3.438423e-52 | -8.615850e-47 |
| Msa0258380 | Msa0598260 | 0.802565 | 5.281894e-49 | -8.615850e-47 |
| Msa0266010 | Msa0598260 | 0.807803 | 4.228279e-50 | -8.615850e-47 |
| Msa0507190 | Msa0598260 | 0.802911 | 4.481835e-49 | -8.615850e-47 |
| Msa0558850 | Msa0598260 | 0.809487 | 1.847070e-50 | -8.615850e-47 |
| Msa0573300 | Msa0598260 | 0.812894 | 3.369672e-51 | -8.615850e-47 |
| Msa0573330 | Msa0598260 | 0.810277 | 1.248840e-50 | -8.615850e-47 |
| Msa0573970 | Msa0598260 | 0.803115 | 4.065556e-49 | -8.615850e-47 |
| Msa0598260 | Msa0622690 | 0.825073 | 5.718936e-54 | -8.615850e-47 |
| Msa0598260 | Msa0623270 | 0.801867 | 7.351529e-49 | -8.615850e-47 |
| Msa0598260 | Msa0637910 | 0.991999 | 1.002647e-190 | -8.615850e-47 |
| Msa0598260 | Msa0668160 | 0.835633 | 1.497577e-56 | -8.615850e-47 |
| Msa0598260 | Msa0685880 | 0.811018 | 8.632868e-51 | -8.615850e-47 |
| Msa0598260 | Msa0764020 | 0.806954 | 6.399675e-50 | -8.615850e-47 |
| Msa0598260 | Msa0789800 | 0.800418 | 1.455038e-48 | -8.615850e-47 |
| Msa0598260 | Msa1070780 | 0.827093 | 1.892671e-54 | -8.615850e-47 |
| Msa0598260 | Msa1147200 | 0.807055 | 6.093794e-50 | -8.615850e-47 |
| Msa0598260 | Msa1151970 | 0.811706 | 6.121550e-51 | -8.615850e-47 |
| Msa0598260 | Msa1165290 | 0.808910 | 2.455112e-50 | -8.615850e-47 |
| Msa0598260 | Msa1204390 | 0.807607 | 4.654829e-50 | -8.615850e-47 |
| Msa0598260 | Msa1206560 | 0.801302 | 9.601333e-49 | -8.615850e-47 |
| Msa0598260 | Msa1267330 | 0.806642 | 7.450107e-50 | -8.615850e-47 |
| Msa0598260 | Msa1319720 | 0.835841 | 1.326539e-56 | -8.615850e-47 |
| Msa0598260 | Msa1346920 | 0.804498 | 2.098554e-49 | -8.615850e-47 |
| Msa0598260 | Msa1348240 | 0.800573 | 1.353027e-48 | -8.615850e-47 |
| Msa0598260 | Msa1356460 | 0.800702 | 1.273064e-48 | -8.615850e-47 |
| Msa0598260 | Msa1371840 | 0.829225 | 5.797855e-55 | -8.615850e-47 |
| Msa0598260 | Msa1440980 | 0.803699 | 3.078180e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0598260 | MtrunA17_Chr4g0021041 | 93.532 | 402 | 18 | 5 | 5 | 401 | 6 | 404 | 0.0 | 722 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0598260 | AT5G17520.1 | 68.155 | 336 | 101 | 1 | 69 | 398 | 79 | 414 | 2.08e-165 | 470 |
| Msa0598260 | AT5G17520.2 | 70.978 | 317 | 92 | 0 | 82 | 398 | 36 | 352 | 1.20e-163 | 463 |
| Msa0598260 | AT5G17523.1 | 60.390 | 154 | 55 | 1 | 69 | 216 | 79 | 232 | 3.61e-50 | 170 |
Find 111 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCGACAGGAATGGCTTTC+TGG | 0.160629 | 4_2:+32829189 | Msa0598260:intron |
| GTTTCCAGCAATGAGATTTC+TGG | 0.183789 | 4_2:-32825232 | None:intergenic |
| AAGAGCATTGAGAGTAAAAT+TGG | 0.190905 | 4_2:-32824996 | None:intergenic |
| ATGCTGGAATCTGGCGCTTT+TGG | 0.199585 | 4_2:+32827021 | Msa0598260:CDS |
| AAATTTGTTGGTGGAATATC+TGG | 0.287335 | 4_2:+32827772 | Msa0598260:CDS |
| CTTGGCAGCAACTGTTGGTT+TGG | 0.306600 | 4_2:+32828783 | Msa0598260:CDS |
| TGGGAAGATTTCATTACAAT+TGG | 0.310319 | 4_2:+32827041 | Msa0598260:CDS |
| CAAGATGCTGTTAGGTAGAT+AGG | 0.317684 | 4_2:-32827205 | None:intergenic |
| TGCGTGTATGTTGTTGTTGT+TGG | 0.322985 | 4_2:-32824706 | None:intergenic |
| TTTCAATTATGTGTATAGTA+TGG | 0.327121 | 4_2:+32829387 | Msa0598260:three_prime_UTR |
| TGGGGACAGAAATATGATTT+TGG | 0.328614 | 4_2:-32824949 | None:intergenic |
| GCTACCATATTCTATGGATA+TGG | 0.332128 | 4_2:+32828612 | Msa0598260:CDS |
| GCTTACTAAATGCTGGAATC+TGG | 0.333611 | 4_2:+32827012 | Msa0598260:CDS |
| TATCAACAAGGAATTCTTCT+TGG | 0.335994 | 4_2:+32828765 | Msa0598260:CDS |
| TCGTGGGCTACCATATTCTA+TGG | 0.338875 | 4_2:+32828606 | Msa0598260:CDS |
| GCGTGTATGTTGTTGTTGTT+GGG | 0.346180 | 4_2:-32824705 | None:intergenic |
| GGGAAGATTTCATTACAATT+GGG | 0.361219 | 4_2:+32827042 | Msa0598260:CDS |
| AATACTTACAATAAATATAA+TGG | 0.361946 | 4_2:-32829605 | None:intergenic |
| TCTGTGGCATTTGCAGTAAC+AGG | 0.364710 | 4_2:-32825197 | None:intergenic |
| CTGAATTTCATGAATTACTT+TGG | 0.367581 | 4_2:+32826990 | Msa0598260:CDS |
| ATTCCCATATCCATAGAATA+TGG | 0.373480 | 4_2:-32828616 | None:intergenic |
| CAACTGTTGGTTTGGTCTCA+TGG | 0.377532 | 4_2:+32828791 | Msa0598260:CDS |
| ATGAGGAAAAGGAGCATAAC+AGG | 0.377636 | 4_2:-32824828 | None:intergenic |
| TTGTGTTCACTTACAGGAAT+AGG | 0.378103 | 4_2:-32828647 | None:intergenic |
| GACAAGCCTTTCATGTTCTC+AGG | 0.395948 | 4_2:-32827963 | None:intergenic |
| GCATGGTTACAGTTCACCTT+TGG | 0.396273 | 4_2:+32829226 | Msa0598260:CDS |
| CTGAATCCACGTGTATTGTT+GGG | 0.397302 | 4_2:+32824638 | Msa0598260:five_prime_UTR |
| ATTTACTTACAGGCAAGAAC+TGG | 0.402272 | 4_2:+32827727 | Msa0598260:intron |
| TTGCTTGCAATGCTTGGAAA+TGG | 0.408232 | 4_2:+32827999 | Msa0598260:CDS |
| AATGCCAGAAATCTCATTGC+TGG | 0.409511 | 4_2:+32825228 | Msa0598260:CDS |
| TACTTTGGCTTACTAAATGC+TGG | 0.410058 | 4_2:+32827005 | Msa0598260:CDS |
| TCACTTACATCTAAATTCTC+TGG | 0.411129 | 4_2:+32825156 | Msa0598260:CDS |
| ATGTTGTTGTTGTTGGGGTC+GGG | 0.413245 | 4_2:-32824699 | None:intergenic |
| ACACCAGTCTTCTCCCATCT+TGG | 0.414554 | 4_2:+32829426 | Msa0598260:three_prime_UTR |
| ACGTTTACCATCTGAGAAAC+AGG | 0.420030 | 4_2:-32827826 | None:intergenic |
| TTCTTCTTGGCAGCAACTGT+TGG | 0.428308 | 4_2:+32828778 | Msa0598260:CDS |
| GAGAAAGGTGTTAAATTTGT+TGG | 0.432102 | 4_2:+32827760 | Msa0598260:CDS |
| AAATTTAAAGTTTGTGATGC+CGG | 0.435971 | 4_2:+32829279 | Msa0598260:exon |
| GCACCAGGCAAGATGCTGTT+AGG | 0.438842 | 4_2:-32827213 | None:intergenic |
| AACTATGATTGTAGGTTCAC+TGG | 0.442842 | 4_2:+32828579 | Msa0598260:intron |
| CACTGTATTGCATCTGCAGC+AGG | 0.445679 | 4_2:+32829355 | Msa0598260:three_prime_UTR |
| TATGTTGTTGTTGTTGGGGT+CGG | 0.447346 | 4_2:-32824700 | None:intergenic |
| CTCAATCCTGAGAACATGAA+AGG | 0.450928 | 4_2:+32827957 | Msa0598260:CDS |
| ACTGATGAAGTTTAGACATA+TGG | 0.454293 | 4_2:+32829302 | Msa0598260:three_prime_UTR |
| ATATGTTGTCATTGTTCAGT+TGG | 0.460317 | 4_2:+32826899 | Msa0598260:CDS |
| TCTATGTTGCTTGCAATGCT+TGG | 0.464120 | 4_2:+32827993 | Msa0598260:CDS |
| GTCGGGAATAGCAACGTGAT+TGG | 0.465849 | 4_2:-32824682 | None:intergenic |
| CTACCATATTCTATGGATAT+GGG | 0.466317 | 4_2:+32828613 | Msa0598260:CDS |
| TGAAATTGAAGATGAGGAAA+AGG | 0.469570 | 4_2:-32824839 | None:intergenic |
| CATTGTTCAGTTGGCATTAG+CGG | 0.471343 | 4_2:+32826908 | Msa0598260:CDS |
| CAGATATGACTATGAGCAAT+GGG | 0.471686 | 4_2:+32825131 | Msa0598260:CDS |
| GGAATGCTTACTAGTTTGCT+TGG | 0.475196 | 4_2:+32826795 | Msa0598260:CDS |
| GTTGGTTTGGTCTCATGGAT+AGG | 0.485772 | 4_2:+32828796 | Msa0598260:CDS |
| TCTGAATCCACGTGTATTGT+TGG | 0.486399 | 4_2:+32824637 | Msa0598260:five_prime_UTR |
| ACTTCAGTGGTTGTAGTGTC+AGG | 0.495916 | 4_2:+32826960 | Msa0598260:CDS |
| AAGATGCTGTTAGGTAGATA+GGG | 0.497941 | 4_2:-32827204 | None:intergenic |
| GACAGCTATGACAAAGGAAA+TGG | 0.500671 | 4_2:-32827235 | None:intergenic |
| ACTGGAAAACTTTCTGAGAA+AGG | 0.503327 | 4_2:+32827745 | Msa0598260:CDS |
| CTACCTAACAGCATCTTGCC+TGG | 0.509297 | 4_2:+32827210 | Msa0598260:CDS |
| CTTTGCCAAGAAGAGAGAAA+AGG | 0.511181 | 4_2:+32826839 | Msa0598260:CDS |
| GAAGAGAGAAAAGGAAGCAA+TGG | 0.519086 | 4_2:+32826848 | Msa0598260:CDS |
| GCATTTGCAGTAACAGGAAA+GGG | 0.520318 | 4_2:-32825191 | None:intergenic |
| CAATGACTCAATTCCAAGAT+GGG | 0.523169 | 4_2:-32829439 | None:intergenic |
| GGAAGATTTCATTACAATTG+GGG | 0.526329 | 4_2:+32827043 | Msa0598260:CDS |
| CAAAGTATGAAAGTAGTGAC+AGG | 0.529455 | 4_2:-32826821 | None:intergenic |
| ATAATAATTGATGAAACTCA+TGG | 0.534879 | 4_2:+32824805 | Msa0598260:exon |
| AGCTGTCGTGGCTGTTACCA+TGG | 0.536823 | 4_2:+32827251 | Msa0598260:CDS |
| TCAATGACTCAATTCCAAGA+TGG | 0.538239 | 4_2:-32829440 | None:intergenic |
| AAAGGTGTTAAATTTGTTGG+TGG | 0.539268 | 4_2:+32827763 | Msa0598260:CDS |
| ATGTCTAAACTTCATCAGTC+CGG | 0.541626 | 4_2:-32829298 | None:intergenic |
| AGGTGTTGAAATTGAAGATG+AGG | 0.543444 | 4_2:-32824845 | None:intergenic |
| TGCGGTGGTGTTGTTGACTT+AGG | 0.544946 | 4_2:-32824865 | None:intergenic |
| ATGACAAAGGAAATGGCACC+AGG | 0.553392 | 4_2:-32827228 | None:intergenic |
| AGCCACGACAGCTATGACAA+AGG | 0.558295 | 4_2:-32827241 | None:intergenic |
| AATTGGGTCGGCGTAAGAGA+CGG | 0.561241 | 4_2:-32824979 | None:intergenic |
| TAGGTTCACTGGTTCATCGT+GGG | 0.561359 | 4_2:+32828590 | Msa0598260:intron |
| TTCCTTTGTCATAGCTGTCG+TGG | 0.561699 | 4_2:+32827239 | Msa0598260:CDS |
| CAGTTTAAACATTATCAACA+AGG | 0.561755 | 4_2:+32828753 | Msa0598260:intron |
| ATTCCAAGATGGGAGAAGAC+TGG | 0.565918 | 4_2:-32829429 | None:intergenic |
| AGAGCATTGAGAGTAAAATT+GGG | 0.567139 | 4_2:-32824995 | None:intergenic |
| CGTAAGAGACGGTATTGTGT+GGG | 0.571118 | 4_2:-32824968 | None:intergenic |
| GCAGATATGACTATGAGCAA+TGG | 0.575223 | 4_2:+32825130 | Msa0598260:CDS |
| GGCATTTGCAGTAACAGGAA+AGG | 0.580392 | 4_2:-32825192 | None:intergenic |
| GCAATGGTAGTGCAGACACT+TGG | 0.582422 | 4_2:+32826864 | Msa0598260:CDS |
| CAATCTGGATACAGATAATG+TGG | 0.583147 | 4_2:+32827169 | Msa0598260:intron |
| TCATTCTGATCCACCTCACC+AGG | 0.590781 | 4_2:+32825018 | Msa0598260:CDS |
| GCGTAAGAGACGGTATTGTG+TGG | 0.591804 | 4_2:-32824969 | None:intergenic |
| GAAGAAGTGGGATATTTGTG+TGG | 0.594713 | 4_2:-32824896 | None:intergenic |
| CTGCTACGTTACTATTCATG+TGG | 0.604326 | 4_2:+32827800 | Msa0598260:CDS |
| TGAATCCACGTGTATTGTTG+GGG | 0.605461 | 4_2:+32824639 | Msa0598260:five_prime_UTR |
| GTGGATGCCTGTTTCTCAGA+TGG | 0.614756 | 4_2:+32827819 | Msa0598260:CDS |
| CGTGTATGTTGTTGTTGTTG+GGG | 0.617385 | 4_2:-32824704 | None:intergenic |
| CGTATCCCCAACAATACACG+TGG | 0.620044 | 4_2:-32824644 | None:intergenic |
| TGGAGAGACAGTGTAGTGCA+TGG | 0.624152 | 4_2:+32829209 | Msa0598260:CDS |
| CATTGAGAGTAAAATTGGGT+CGG | 0.625150 | 4_2:-32824991 | None:intergenic |
| TAGGTACGTACCTGGTGAGG+TGG | 0.625243 | 4_2:-32825028 | None:intergenic |
| AAGCATGATTACTTCAGTAG+AGG | 0.626595 | 4_2:-32829326 | None:intergenic |
| GAAGATTTCATTACAATTGG+GGG | 0.629398 | 4_2:+32827044 | Msa0598260:CDS |
| CTGGCATTAAGTAAAATCTG+TGG | 0.632705 | 4_2:-32825213 | None:intergenic |
| ATTTGTGTGGTAGAAAATTG+CGG | 0.636258 | 4_2:-32824883 | None:intergenic |
| AGATGCTGTTAGGTAGATAG+GGG | 0.646554 | 4_2:-32827203 | None:intergenic |
| TTGTTGGTGGAATATCTGGA+TGG | 0.651433 | 4_2:+32827776 | Msa0598260:CDS |
| GGAATAGCAACGTGATTGGA+CGG | 0.651889 | 4_2:-32824678 | None:intergenic |
| GTAGGTTCACTGGTTCATCG+TGG | 0.663007 | 4_2:+32828589 | Msa0598260:intron |
| AAGTCACGTAAAGAAGCCAA+AGG | 0.668827 | 4_2:-32829242 | None:intergenic |
| TCTCGAATGAATAAAGCACG+TGG | 0.680027 | 4_2:-32828032 | None:intergenic |
| GTAAGAGACGGTATTGTGTG+GGG | 0.684336 | 4_2:-32824967 | None:intergenic |
| GTGTAGGTACGTACCTGGTG+AGG | 0.714637 | 4_2:-32825031 | None:intergenic |
| TGTGTGGTAGAAAATTGCGG+TGG | 0.733276 | 4_2:-32824880 | None:intergenic |
| ATAGCAACGTGATTGGACGG+TGG | 0.744269 | 4_2:-32824675 | None:intergenic |
| GCTGCAGATGCAATACAGTG+TGG | 0.761311 | 4_2:-32829352 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGTTTTTTTATTTTAACT+TGG | - | chr4_2:32825969-32825988 | None:intergenic | 10.0% |
| !! | AAGTTAAAATAAAAAAACAT+AGG | + | chr4_2:32825968-32825987 | Msa0598260:intron | 10.0% |
| !! | TTTATATACATTTATTAGTT+AGG | + | chr4_2:32826397-32826416 | Msa0598260:intron | 10.0% |
| !!! | TAGATTAGTTTTTTTTTTTT+TGG | + | chr4_2:32828259-32828278 | Msa0598260:intron | 10.0% |
| !!! | GTATTTTATCTATAAAATAA+AGG | - | chr4_2:32829123-32829142 | None:intergenic | 10.0% |
| !! | AATACTTACAATAAATATAA+TGG | - | chr4_2:32829608-32829627 | None:intergenic | 10.0% |
| !!! | ATATTTTAATTTTGTTACTG+TGG | + | chr4_2:32825340-32825359 | Msa0598260:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr4_2:32825696-32825715 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr4_2:32825720-32825739 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr4_2:32825719-32825738 | Msa0598260:intron | 15.0% |
| !!! | AAAACTAAGCAATATTTTTA+GGG | - | chr4_2:32825879-32825898 | None:intergenic | 15.0% |
| !!! | AAAAACTAAGCAATATTTTT+AGG | - | chr4_2:32825880-32825899 | None:intergenic | 15.0% |
| !!! | AAATATTGCTTAGTTTTTAA+AGG | + | chr4_2:32825882-32825901 | Msa0598260:intron | 15.0% |
| !!! | AATATTGCTTAGTTTTTAAA+GGG | + | chr4_2:32825883-32825902 | Msa0598260:intron | 15.0% |
| !! | TTAAAATAAAAAAACATAGG+TGG | + | chr4_2:32825971-32825990 | Msa0598260:intron | 15.0% |
| !! | AATAATCAAATATAACCTAA+AGG | - | chr4_2:32827291-32827310 | None:intergenic | 15.0% |
| !!! | TTTGAGATTTAATGAAAATT+TGG | - | chr4_2:32828111-32828130 | None:intergenic | 15.0% |
| !! | ATAATAATTGATGAAACTCA+TGG | + | chr4_2:32824805-32824824 | Msa0598260:exon | 20.0% |
| !! | TGATTAAATTCTTCAATTAC+CGG | - | chr4_2:32825076-32825095 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTGTTTTGTTTGA+AGG | + | chr4_2:32825098-32825117 | Msa0598260:intron | 20.0% |
| !!! | TTTGTTTTGTTTTGTTTGAA+GGG | + | chr4_2:32825099-32825118 | Msa0598260:intron | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr4_2:32825633-32825652 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr4_2:32825710-32825729 | Msa0598260:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | chr4_2:32825753-32825772 | None:intergenic | 20.0% |
| !! | ACCCCTAAAAAAAAAATATT+GGG | - | chr4_2:32825848-32825867 | None:intergenic | 20.0% |
| !! | ATCTTTCTCAATACATAAAA+TGG | - | chr4_2:32826248-32826267 | None:intergenic | 20.0% |
| !! | CTAATAACATATAACAATCT+GGG | - | chr4_2:32827477-32827496 | None:intergenic | 20.0% |
| !! | TTAAGTTATGTGTTTAACAT+TGG | - | chr4_2:32827510-32827529 | None:intergenic | 20.0% |
| !!! | TTTCATTTTCATTTACTTAC+AGG | + | chr4_2:32827717-32827736 | Msa0598260:intron | 20.0% |
| !!! | ATATATGATGAATGTTTTTG+TGG | + | chr4_2:32827850-32827869 | Msa0598260:intron | 20.0% |
| !! | TCATAAGAAAAAAATGCATA+GGG | - | chr4_2:32827906-32827925 | None:intergenic | 20.0% |
| !! | AAAAAAACTAATCTACAACA+AGG | - | chr4_2:32828254-32828273 | None:intergenic | 20.0% |
| !!! | GTGGTTCAATTTAAAATTTA+TGG | + | chr4_2:32828392-32828411 | Msa0598260:intron | 20.0% |
| !!! | GTTTGATTTGTATTTTGAAT+TGG | + | chr4_2:32828879-32828898 | Msa0598260:intron | 20.0% |
| !! | TTTCAATTATGTGTATAGTA+TGG | + | chr4_2:32829387-32829406 | Msa0598260:three_prime_UTR | 20.0% |
| !!! | GCCCCAATATTTTTTTTTTA+GGG | + | chr4_2:32825843-32825862 | Msa0598260:intron | 25.0% |
| ! | CCCCTAAAAAAAAAATATTG+GGG | - | chr4_2:32825847-32825866 | None:intergenic | 25.0% |
| !!! | CCCCAATATTTTTTTTTTAG+GGG | + | chr4_2:32825844-32825863 | Msa0598260:intron | 25.0% |
| ! | GACCCCTAAAAAAAAAATAT+TGG | - | chr4_2:32825849-32825868 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTAGGGGTCTATT+AGG | + | chr4_2:32825853-32825872 | Msa0598260:intron | 25.0% |
| ! | ACCATAACAATCACAATAAA+CGG | - | chr4_2:32825939-32825958 | None:intergenic | 25.0% |
| ! | GTGAGATTAAAAAAGAACAA+AGG | + | chr4_2:32826048-32826067 | Msa0598260:intron | 25.0% |
| ! | CTGAATTTCATGAATTACTT+TGG | + | chr4_2:32826990-32827009 | Msa0598260:CDS | 25.0% |
| !! | AATTTTACTAATACTAGGCT+GGG | - | chr4_2:32827108-32827127 | None:intergenic | 25.0% |
| !! | TAATTTTACTAATACTAGGC+TGG | - | chr4_2:32827109-32827128 | None:intergenic | 25.0% |
| !! | CGTCTAATTTTACTAATACT+AGG | - | chr4_2:32827113-32827132 | None:intergenic | 25.0% |
| !! | GTAATCTTCTTATTTCCTTT+AGG | + | chr4_2:32827273-32827292 | Msa0598260:intron | 25.0% |
| !!! | GAATTCATTTTGACATTTTG+AGG | - | chr4_2:32827444-32827463 | None:intergenic | 25.0% |
| ! | GCTAATAACATATAACAATC+TGG | - | chr4_2:32827478-32827497 | None:intergenic | 25.0% |
| ! | TGTTTAACATTGGTATGATA+GGG | - | chr4_2:32827500-32827519 | None:intergenic | 25.0% |
| ! | CATAAGAAAAAAATGCATAG+GGG | - | chr4_2:32827905-32827924 | None:intergenic | 25.0% |
| ! | GTCATAAGAAAAAAATGCAT+AGG | - | chr4_2:32827907-32827926 | None:intergenic | 25.0% |
| ! | TCCACTAGAAAACAAAAAAT+GGG | - | chr4_2:32827929-32827948 | None:intergenic | 25.0% |
| !! | TATTCATTCGAGATTTTATG+TGG | + | chr4_2:32828042-32828061 | Msa0598260:CDS | 25.0% |
| ! | ACAGTAATATGTAGAAAATG+AGG | + | chr4_2:32828343-32828362 | Msa0598260:intron | 25.0% |
| ! | CACAATAAATCAATTATCAC+TGG | - | chr4_2:32828458-32828477 | None:intergenic | 25.0% |
| ! | ACCTACAATCATAGTTAAAT+CGG | - | chr4_2:32828575-32828594 | None:intergenic | 25.0% |
| !!! | CTTGTTGATAATGTTTAAAC+TGG | - | chr4_2:32828755-32828774 | None:intergenic | 25.0% |
| ! | CAGTTTAAACATTATCAACA+AGG | + | chr4_2:32828753-32828772 | Msa0598260:intron | 25.0% |
| ! | GTGTTCACAATCAATAATTA+AGG | + | chr4_2:32828913-32828932 | Msa0598260:intron | 25.0% |
| ! | TTCACAATCAATAATTAAGG+TGG | + | chr4_2:32828916-32828935 | Msa0598260:intron | 25.0% |
| !! | GGTATAACTATTTTATGTAG+TGG | + | chr4_2:32828937-32828956 | Msa0598260:intron | 25.0% |
| ! | AGAGATGTTGTCAAATTATA+AGG | + | chr4_2:32829005-32829024 | Msa0598260:intron | 25.0% |
| ! | GAGATGTTGTCAAATTATAA+GGG | + | chr4_2:32829006-32829025 | Msa0598260:intron | 25.0% |
| ! | TAGATAAAATACTGCTGAAA+TGG | + | chr4_2:32829131-32829150 | Msa0598260:intron | 25.0% |
| !! | AAATTTAAAGTTTGTGATGC+CGG | + | chr4_2:32829279-32829298 | Msa0598260:exon | 25.0% |
| !! | GTAATTAATTAGCGTTTTAC+AGG | + | chr4_2:32829475-32829494 | Msa0598260:three_prime_UTR | 25.0% |
| TGAAATTGAAGATGAGGAAA+AGG | - | chr4_2:32824842-32824861 | None:intergenic | 30.0% | |
| ATTTGTGTGGTAGAAAATTG+CGG | - | chr4_2:32824886-32824905 | None:intergenic | 30.0% | |
| !! | CAGAAATATGATTTTGGTGA+AGG | - | chr4_2:32824946-32824965 | None:intergenic | 30.0% |
| !! | AGAGCATTGAGAGTAAAATT+GGG | - | chr4_2:32824998-32825017 | None:intergenic | 30.0% |
| !! | AAGAGCATTGAGAGTAAAAT+TGG | - | chr4_2:32824999-32825018 | None:intergenic | 30.0% |
| TCACTTACATCTAAATTCTC+TGG | + | chr4_2:32825156-32825175 | Msa0598260:CDS | 30.0% | |
| GATTTAAAAATTACCAGCCA+TGG | - | chr4_2:32825279-32825298 | None:intergenic | 30.0% | |
| TAAATCATACACTTGTCTTG+TGG | + | chr4_2:32825293-32825312 | Msa0598260:intron | 30.0% | |
| AAATCATACACTTGTCTTGT+GGG | + | chr4_2:32825294-32825313 | Msa0598260:intron | 30.0% | |
| TGTGCAGAATATTAATTGGA+GGG | - | chr4_2:32825667-32825686 | None:intergenic | 30.0% | |
| GTAGTGTGCAGAATATTAAT+TGG | - | chr4_2:32825671-32825690 | None:intergenic | 30.0% | |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr4_2:32825801-32825820 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr4_2:32825802-32825821 | Msa0598260:intron | 30.0% |
| !!! | GGCCCCAATATTTTTTTTTT+AGG | + | chr4_2:32825842-32825861 | Msa0598260:intron | 30.0% |
| !! | ATTGCTTAGTTTTTAAAGGG+AGG | + | chr4_2:32825886-32825905 | Msa0598260:intron | 30.0% |
| TCCGTTTATTGTGATTGTTA+TGG | + | chr4_2:32825935-32825954 | Msa0598260:intron | 30.0% | |
| TTTGCAAGAAGAAATTGCAA+AGG | + | chr4_2:32826083-32826102 | Msa0598260:intron | 30.0% | |
| !!! | AAACAGAATTTAGCTTTTCG+TGG | + | chr4_2:32826165-32826184 | Msa0598260:intron | 30.0% |
| !!! | TTTTTTCAGAGGAACTCAAA+AGG | - | chr4_2:32826505-32826524 | None:intergenic | 30.0% |
| GTACTTTAATCAAACATGCA+CGG | + | chr4_2:32826712-32826731 | Msa0598260:intron | 30.0% | |
| ATTGACAATCATGTCACTAA+AGG | - | chr4_2:32826771-32826790 | None:intergenic | 30.0% | |
| ATATGTTGTCATTGTTCAGT+TGG | + | chr4_2:32826899-32826918 | Msa0598260:CDS | 30.0% | |
| ACTGAAGTTGCTAAAAAGTA+CGG | - | chr4_2:32826948-32826967 | None:intergenic | 30.0% | |
| TGGGAAGATTTCATTACAAT+TGG | + | chr4_2:32827041-32827060 | Msa0598260:CDS | 30.0% | |
| GGGAAGATTTCATTACAATT+GGG | + | chr4_2:32827042-32827061 | Msa0598260:CDS | 30.0% | |
| GGAAGATTTCATTACAATTG+GGG | + | chr4_2:32827043-32827062 | Msa0598260:CDS | 30.0% | |
| GAAGATTTCATTACAATTGG+GGG | + | chr4_2:32827044-32827063 | Msa0598260:CDS | 30.0% | |
| AAGGAAAACACTATTACTTG+AGG | - | chr4_2:32827083-32827102 | None:intergenic | 30.0% | |
| CTGTATCCAGATTGTAAATT+GGG | - | chr4_2:32827163-32827182 | None:intergenic | 30.0% | |
| TCTGTATCCAGATTGTAAAT+TGG | - | chr4_2:32827164-32827183 | None:intergenic | 30.0% | |
| AGGAAATAAGAAGATTACCA+TGG | - | chr4_2:32827271-32827290 | None:intergenic | 30.0% | |
| ! | TTATTTCTCAGAACTTAGTC+CGG | + | chr4_2:32827306-32827325 | Msa0598260:intron | 30.0% |
| TAACATATAACAATCTGGGT+GGG | - | chr4_2:32827473-32827492 | None:intergenic | 30.0% | |
| ATAACATATAACAATCTGGG+TGG | - | chr4_2:32827474-32827493 | None:intergenic | 30.0% | |
| GTGTTTAACATTGGTATGAT+AGG | - | chr4_2:32827501-32827520 | None:intergenic | 30.0% | |
| AAGCACTTAAATGGAAATTC+AGG | - | chr4_2:32827540-32827559 | None:intergenic | 30.0% | |
| TGGTGAATTAAGCACTTAAA+TGG | - | chr4_2:32827549-32827568 | None:intergenic | 30.0% | |
| GTTAGCTAAACCAAGAAATT+TGG | + | chr4_2:32827632-32827651 | Msa0598260:intron | 30.0% | |
| !! | GAGAAAGGTGTTAAATTTGT+TGG | + | chr4_2:32827760-32827779 | Msa0598260:CDS | 30.0% |
| !! | AAAGGTGTTAAATTTGTTGG+TGG | + | chr4_2:32827763-32827782 | Msa0598260:CDS | 30.0% |
| !! | AAATTTGTTGGTGGAATATC+TGG | + | chr4_2:32827772-32827791 | Msa0598260:CDS | 30.0% |
| !!! | ACCCATTTTTTGTTTTCTAG+TGG | + | chr4_2:32827925-32827944 | Msa0598260:intron | 30.0% |
| GTCCACTAGAAAACAAAAAA+TGG | - | chr4_2:32827930-32827949 | None:intergenic | 30.0% | |
| AACAAGGATTTAACCATAAC+GGG | - | chr4_2:32828238-32828257 | None:intergenic | 30.0% | |
| CAACAAGGATTTAACCATAA+CGG | - | chr4_2:32828239-32828258 | None:intergenic | 30.0% | |
| ! | ACCGATTTAACTATGATTGT+AGG | + | chr4_2:32828571-32828590 | Msa0598260:intron | 30.0% |
| CTACCATATTCTATGGATAT+GGG | + | chr4_2:32828613-32828632 | Msa0598260:CDS | 30.0% | |
| ATTCCCATATCCATAGAATA+TGG | - | chr4_2:32828619-32828638 | None:intergenic | 30.0% | |
| TATCAACAAGGAATTCTTCT+TGG | + | chr4_2:32828765-32828784 | Msa0598260:CDS | 30.0% | |
| AGATAATATGATTGCTCAAG+AGG | - | chr4_2:32828826-32828845 | None:intergenic | 30.0% | |
| AAATGGCTTTCTGATTAAAG+TGG | + | chr4_2:32829148-32829167 | Msa0598260:intron | 30.0% | |
| ! | CATTTTTATGAAATTGCGAC+AGG | + | chr4_2:32829176-32829195 | Msa0598260:intron | 30.0% |
| !! | TCTTTACGTGACTTAGTTTT+TGG | + | chr4_2:32829251-32829270 | Msa0598260:CDS | 30.0% |
| ACTGATGAAGTTTAGACATA+TGG | + | chr4_2:32829302-32829321 | Msa0598260:three_prime_UTR | 30.0% | |
| !! | AGGTGTTGAAATTGAAGATG+AGG | - | chr4_2:32824848-32824867 | None:intergenic | 35.0% |
| GAAGAAGAAGAAGAAGAAGT+GGG | - | chr4_2:32824911-32824930 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAAGAAGAAG+TGG | - | chr4_2:32824912-32824931 | None:intergenic | 35.0% | |
| ! | TGGGGACAGAAATATGATTT+TGG | - | chr4_2:32824952-32824971 | None:intergenic | 35.0% |
| CATTGAGAGTAAAATTGGGT+CGG | - | chr4_2:32824994-32825013 | None:intergenic | 35.0% | |
| CAGATATGACTATGAGCAAT+GGG | + | chr4_2:32825131-32825150 | Msa0598260:CDS | 35.0% | |
| CTGGCATTAAGTAAAATCTG+TGG | - | chr4_2:32825216-32825235 | None:intergenic | 35.0% | |
| !!! | TTATTTTTTGGGGCCTAAGA+CGG | - | chr4_2:32825535-32825554 | None:intergenic | 35.0% |
| !!! | GAGGGAGTACTTATTTTTTG+GGG | - | chr4_2:32825545-32825564 | None:intergenic | 35.0% |
| !!! | GGAGGGAGTACTTATTTTTT+GGG | - | chr4_2:32825546-32825565 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr4_2:32825567-32825586 | None:intergenic | 35.0% |
| GTGTGCAGAATATTAATTGG+AGG | - | chr4_2:32825668-32825687 | None:intergenic | 35.0% | |
| TTAGTTAGGACCCAAATTGT+AGG | + | chr4_2:32826411-32826430 | Msa0598260:intron | 35.0% | |
| TAAGGTCATGTAATCTCCAT+AGG | - | chr4_2:32826476-32826495 | None:intergenic | 35.0% | |
| GAACTCAAAAGGTCTTCTTA+AGG | - | chr4_2:32826494-32826513 | None:intergenic | 35.0% | |
| !!! | AGGATCAGCTATTTTTTCAG+AGG | - | chr4_2:32826516-32826535 | None:intergenic | 35.0% |
| TTAATTCAGCCAAGTGAAGT+GGG | - | chr4_2:32826618-32826637 | None:intergenic | 35.0% | |
| ATTAATTCAGCCAAGTGAAG+TGG | - | chr4_2:32826619-32826638 | None:intergenic | 35.0% | |
| TTCACTTGGCTGAATTAATG+AGG | + | chr4_2:32826620-32826639 | Msa0598260:intron | 35.0% | |
| GTTGCTCTTATATCCTAATG+TGG | + | chr4_2:32826741-32826760 | Msa0598260:intron | 35.0% | |
| CAAAGTATGAAAGTAGTGAC+AGG | - | chr4_2:32826824-32826843 | None:intergenic | 35.0% | |
| !! | GTACTTTTTAGCAACTTCAG+TGG | + | chr4_2:32826947-32826966 | Msa0598260:CDS | 35.0% |
| ! | TACTTTGGCTTACTAAATGC+TGG | + | chr4_2:32827005-32827024 | Msa0598260:CDS | 35.0% |
| CATTACAATTGGGGGTTTAT+CGG | + | chr4_2:32827052-32827071 | Msa0598260:CDS | 35.0% | |
| TAAATTGGGAAATGCGAGTT+AGG | - | chr4_2:32827149-32827168 | None:intergenic | 35.0% | |
| GCATTTCCCAATTTACAATC+TGG | + | chr4_2:32827154-32827173 | Msa0598260:intron | 35.0% | |
| CAATCTGGATACAGATAATG+TGG | + | chr4_2:32827169-32827188 | Msa0598260:intron | 35.0% | |
| AAGATGCTGTTAGGTAGATA+GGG | - | chr4_2:32827207-32827226 | None:intergenic | 35.0% | |
| TATTTCTCAGAACTTAGTCC+GGG | + | chr4_2:32827307-32827326 | Msa0598260:intron | 35.0% | |
| ! | GTACATTTTATCATGCAACC+CGG | - | chr4_2:32827328-32827347 | None:intergenic | 35.0% |
| TGGGGTACAGTATTTGTAAT+GGG | - | chr4_2:32827362-32827381 | None:intergenic | 35.0% | |
| ATGGGGTACAGTATTTGTAA+TGG | - | chr4_2:32827363-32827382 | None:intergenic | 35.0% | |
| !! | TTCTTCCACTGATTCACAAT+GGG | - | chr4_2:32827381-32827400 | None:intergenic | 35.0% |
| !! | TTTCTTCCACTGATTCACAA+TGG | - | chr4_2:32827382-32827401 | None:intergenic | 35.0% |
| TTCACCAACTTATGCAAAAG+AGG | + | chr4_2:32827562-32827581 | Msa0598260:intron | 35.0% | |
| ! | TCATCCTCTTTTGCATAAGT+TGG | - | chr4_2:32827569-32827588 | None:intergenic | 35.0% |
| ACACGGAATTCCAAATTTCT+TGG | - | chr4_2:32827645-32827664 | None:intergenic | 35.0% | |
| CCTAATCTAGAAACAAGACA+CGG | - | chr4_2:32827662-32827681 | None:intergenic | 35.0% | |
| ATTTACTTACAGGCAAGAAC+TGG | + | chr4_2:32827727-32827746 | Msa0598260:intron | 35.0% | |
| ! | ACTGGAAAACTTTCTGAGAA+AGG | + | chr4_2:32827745-32827764 | Msa0598260:CDS | 35.0% |
| GATGAATTTGCAACAGTCAA+TGG | - | chr4_2:32828151-32828170 | None:intergenic | 35.0% | |
| ! | TCAGGAAATTTTCATGCGAA+TGG | - | chr4_2:32828202-32828221 | None:intergenic | 35.0% |
| ACAAGGATTTAACCATAACG+GGG | - | chr4_2:32828237-32828256 | None:intergenic | 35.0% | |
| !! | CAAGTTTGTTGTAGAATAGC+TGG | + | chr4_2:32828318-32828337 | Msa0598260:intron | 35.0% |
| !! | AGGTGTTACTCAAATTGTCA+TGG | + | chr4_2:32828363-32828382 | Msa0598260:intron | 35.0% |
| TGTTACTCAAATTGTCATGG+TGG | + | chr4_2:32828366-32828385 | Msa0598260:intron | 35.0% | |
| GTTACTCAAATTGTCATGGT+GGG | + | chr4_2:32828367-32828386 | Msa0598260:intron | 35.0% | |
| TGCAACACAGCATTTAGAAA+TGG | - | chr4_2:32828524-32828543 | None:intergenic | 35.0% | |
| AACTATGATTGTAGGTTCAC+TGG | + | chr4_2:32828579-32828598 | Msa0598260:intron | 35.0% | |
| GCTACCATATTCTATGGATA+TGG | + | chr4_2:32828612-32828631 | Msa0598260:CDS | 35.0% | |
| TTGTGTTCACTTACAGGAAT+AGG | - | chr4_2:32828650-32828669 | None:intergenic | 35.0% | |
| ! | TCCAGTTTTCATCTGCATTT+TGG | + | chr4_2:32828671-32828690 | Msa0598260:intron | 35.0% |
| ! | CCAGTTTTCATCTGCATTTT+GGG | + | chr4_2:32828672-32828691 | Msa0598260:intron | 35.0% |
| CATCTCTACTCTAGTTGTAT+GGG | - | chr4_2:32828992-32829011 | None:intergenic | 35.0% | |
| ACATCTCTACTCTAGTTGTA+TGG | - | chr4_2:32828993-32829012 | None:intergenic | 35.0% | |
| TTATGAAATTGCGACAGGAA+TGG | + | chr4_2:32829181-32829200 | Msa0598260:intron | 35.0% | |
| ATGTCTAAACTTCATCAGTC+CGG | - | chr4_2:32829301-32829320 | None:intergenic | 35.0% | |
| AAGCATGATTACTTCAGTAG+AGG | - | chr4_2:32829329-32829348 | None:intergenic | 35.0% | |
| CAATGACTCAATTCCAAGAT+GGG | - | chr4_2:32829442-32829461 | None:intergenic | 35.0% | |
| TCAATGACTCAATTCCAAGA+TGG | - | chr4_2:32829443-32829462 | None:intergenic | 35.0% | |
| TCTGAATCCACGTGTATTGT+TGG | + | chr4_2:32824637-32824656 | Msa0598260:five_prime_UTR | 40.0% | |
| CTGAATCCACGTGTATTGTT+GGG | + | chr4_2:32824638-32824657 | Msa0598260:five_prime_UTR | 40.0% | |
| TGAATCCACGTGTATTGTTG+GGG | + | chr4_2:32824639-32824658 | Msa0598260:five_prime_UTR | 40.0% | |
| ! | TATGTTGTTGTTGTTGGGGT+CGG | - | chr4_2:32824703-32824722 | None:intergenic | 40.0% |
| ! | CGTGTATGTTGTTGTTGTTG+GGG | - | chr4_2:32824707-32824726 | None:intergenic | 40.0% |
| ! | GCGTGTATGTTGTTGTTGTT+GGG | - | chr4_2:32824708-32824727 | None:intergenic | 40.0% |
| ! | TGCGTGTATGTTGTTGTTGT+TGG | - | chr4_2:32824709-32824728 | None:intergenic | 40.0% |
| ! | ATGAGGAAAAGGAGCATAAC+AGG | - | chr4_2:32824831-32824850 | None:intergenic | 40.0% |
| GAAGAAGTGGGATATTTGTG+TGG | - | chr4_2:32824899-32824918 | None:intergenic | 40.0% | |
| GCAGATATGACTATGAGCAA+TGG | + | chr4_2:32825130-32825149 | Msa0598260:CDS | 40.0% | |
| GCATTTGCAGTAACAGGAAA+GGG | - | chr4_2:32825194-32825213 | None:intergenic | 40.0% | |
| AATGCCAGAAATCTCATTGC+TGG | + | chr4_2:32825228-32825247 | Msa0598260:CDS | 40.0% | |
| GTTTCCAGCAATGAGATTTC+TGG | - | chr4_2:32825235-32825254 | None:intergenic | 40.0% | |
| !!! | CTGCTCTTTTTGCTATTCCA+TGG | + | chr4_2:32825259-32825278 | Msa0598260:CDS | 40.0% |
| !!! | TCTTTTTGCTATTCCATGGC+TGG | + | chr4_2:32825263-32825282 | Msa0598260:CDS | 40.0% |
| TATGAGTTGTGTGTATCAGC+AGG | + | chr4_2:32825479-32825498 | Msa0598260:intron | 40.0% | |
| ATGAGTTGTGTGTATCAGCA+GGG | + | chr4_2:32825480-32825499 | Msa0598260:intron | 40.0% | |
| !!! | CGGAGGGAGTACTTATTTTT+TGG | - | chr4_2:32825547-32825566 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr4_2:32825806-32825825 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr4_2:32825806-32825825 | Msa0598260:intron | 40.0% |
| ! | AACGGAGGGAGTATGAAATT+TGG | + | chr4_2:32825820-32825839 | Msa0598260:intron | 40.0% |
| ! | ACGGAGGGAGTATGAAATTT+GGG | + | chr4_2:32825821-32825840 | Msa0598260:intron | 40.0% |
| !! | TTAGCTTTTCGTGGATCTAG+TGG | + | chr4_2:32826174-32826193 | Msa0598260:intron | 40.0% |
| ! | ATGTCACAAGACAGGTTGAA+TGG | + | chr4_2:32826217-32826236 | Msa0598260:intron | 40.0% |
| TCGCATCTAGAAAATCTCGT+AGG | + | chr4_2:32826308-32826327 | Msa0598260:intron | 40.0% | |
| CTAGGACGAACCTACAATTT+GGG | - | chr4_2:32826424-32826443 | None:intergenic | 40.0% | |
| ATGTAATCTCCATAGGCACA+AGG | - | chr4_2:32826469-32826488 | None:intergenic | 40.0% | |
| GTCACATGTTCTCAAACTAG+AGG | - | chr4_2:32826536-32826555 | None:intergenic | 40.0% | |
| CACTAAAGGTCAACCACATT+AGG | - | chr4_2:32826757-32826776 | None:intergenic | 40.0% | |
| AGTGACATGATTGTCAATGC+AGG | + | chr4_2:32826773-32826792 | Msa0598260:intron | 40.0% | |
| GTGACATGATTGTCAATGCA+GGG | + | chr4_2:32826774-32826793 | Msa0598260:intron | 40.0% | |
| !! | GGAATGCTTACTAGTTTGCT+TGG | + | chr4_2:32826795-32826814 | Msa0598260:CDS | 40.0% |
| CTTTGCCAAGAAGAGAGAAA+AGG | + | chr4_2:32826839-32826858 | Msa0598260:CDS | 40.0% | |
| ! | TGCTTCCTTTTCTCTCTTCT+TGG | - | chr4_2:32826847-32826866 | None:intergenic | 40.0% |
| GAAGAGAGAAAAGGAAGCAA+TGG | + | chr4_2:32826848-32826867 | Msa0598260:CDS | 40.0% | |
| CATTGTTCAGTTGGCATTAG+CGG | + | chr4_2:32826908-32826927 | Msa0598260:CDS | 40.0% | |
| ! | GTTGCTAAAAAGTACGGCAA+AGG | - | chr4_2:32826942-32826961 | None:intergenic | 40.0% |
| GCTTACTAAATGCTGGAATC+TGG | + | chr4_2:32827012-32827031 | Msa0598260:CDS | 40.0% | |
| GGAAATGCGAGTTAGGAAAT+CGG | - | chr4_2:32827142-32827161 | None:intergenic | 40.0% | |
| AGATGCTGTTAGGTAGATAG+GGG | - | chr4_2:32827206-32827225 | None:intergenic | 40.0% | |
| CAAGATGCTGTTAGGTAGAT+AGG | - | chr4_2:32827208-32827227 | None:intergenic | 40.0% | |
| GACAGCTATGACAAAGGAAA+TGG | - | chr4_2:32827238-32827257 | None:intergenic | 40.0% | |
| !! | TCTTCCACTGATTCACAATG+GGG | - | chr4_2:32827380-32827399 | None:intergenic | 40.0% |
| !! | CCGTGTCTTGTTTCTAGATT+AGG | + | chr4_2:32827659-32827678 | Msa0598260:intron | 40.0% |
| !! | GTCTTGTTTCTAGATTAGGC+CGG | + | chr4_2:32827663-32827682 | Msa0598260:intron | 40.0% |
| TGGAATTGAAGCTGGGAAAT+AGG | + | chr4_2:32827687-32827706 | Msa0598260:intron | 40.0% | |
| ! | TTGTTGGTGGAATATCTGGA+TGG | + | chr4_2:32827776-32827795 | Msa0598260:CDS | 40.0% |
| CTGCTACGTTACTATTCATG+TGG | + | chr4_2:32827800-32827819 | Msa0598260:CDS | 40.0% | |
| ACGTTTACCATCTGAGAAAC+AGG | - | chr4_2:32827829-32827848 | None:intergenic | 40.0% | |
| CTCAATCCTGAGAACATGAA+AGG | + | chr4_2:32827957-32827976 | Msa0598260:CDS | 40.0% | |
| ! | TCTATGTTGCTTGCAATGCT+TGG | + | chr4_2:32827993-32828012 | Msa0598260:CDS | 40.0% |
| TTGCTTGCAATGCTTGGAAA+TGG | + | chr4_2:32827999-32828018 | Msa0598260:CDS | 40.0% | |
| TCTCGAATGAATAAAGCACG+TGG | - | chr4_2:32828035-32828054 | None:intergenic | 40.0% | |
| CAAGGATTTAACCATAACGG+GGG | - | chr4_2:32828236-32828255 | None:intergenic | 40.0% | |
| CCCAAAATGCAGATGAAAAC+TGG | - | chr4_2:32828675-32828694 | None:intergenic | 40.0% | |
| !! | TTTCATCTGCATTTTGGGTC+TGG | + | chr4_2:32828677-32828696 | Msa0598260:intron | 40.0% |
| AAGTCACGTAAAGAAGCCAA+AGG | - | chr4_2:32829245-32829264 | None:intergenic | 40.0% | |
| GGAATAGCAACGTGATTGGA+CGG | - | chr4_2:32824681-32824700 | None:intergenic | 45.0% | |
| ! | ATGTTGTTGTTGTTGGGGTC+GGG | - | chr4_2:32824702-32824721 | None:intergenic | 45.0% |
| TGTGTGGTAGAAAATTGCGG+TGG | - | chr4_2:32824883-32824902 | None:intergenic | 45.0% | |
| GTAAGAGACGGTATTGTGTG+GGG | - | chr4_2:32824970-32824989 | None:intergenic | 45.0% | |
| CGTAAGAGACGGTATTGTGT+GGG | - | chr4_2:32824971-32824990 | None:intergenic | 45.0% | |
| GGCATTTGCAGTAACAGGAA+AGG | - | chr4_2:32825195-32825214 | None:intergenic | 45.0% | |
| TCTGTGGCATTTGCAGTAAC+AGG | - | chr4_2:32825200-32825219 | None:intergenic | 45.0% | |
| ACACTTGTCTTGTGGGTTTC+AGG | + | chr4_2:32825301-32825320 | Msa0598260:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr4_2:32825805-32825824 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr4_2:32825805-32825824 | Msa0598260:intron | 45.0% |
| ! | TTAAAGGGAGGTGTGCTTGT+TGG | + | chr4_2:32825898-32825917 | Msa0598260:intron | 45.0% |
| GATCGTCAATGTCACAAGAC+AGG | + | chr4_2:32826209-32826228 | Msa0598260:intron | 45.0% | |
| CCTAGGACGAACCTACAATT+TGG | - | chr4_2:32826425-32826444 | None:intergenic | 45.0% | |
| CCAAATTGTAGGTTCGTCCT+AGG | + | chr4_2:32826422-32826441 | Msa0598260:intron | 45.0% | |
| !!! | TTCTGAGATTTTGGTGGCCT+AGG | - | chr4_2:32826442-32826461 | None:intergenic | 45.0% |
| GGCCACCAAAATCTCAGAAA+CGG | + | chr4_2:32826443-32826462 | Msa0598260:intron | 45.0% | |
| !!! | CAAGGCCGTTTCTGAGATTT+TGG | - | chr4_2:32826451-32826470 | None:intergenic | 45.0% |
| TGAGAACATGTGACGTCACA+TGG | + | chr4_2:32826542-32826561 | Msa0598260:intron | 45.0% | |
| TCTTGCATACCCACTTCACT+TGG | + | chr4_2:32826606-32826625 | Msa0598260:intron | 45.0% | |
| TTAATCAAACATGCACGGCG+TGG | + | chr4_2:32826717-32826736 | Msa0598260:intron | 45.0% | |
| ACTTCAGTGGTTGTAGTGTC+AGG | + | chr4_2:32826960-32826979 | Msa0598260:CDS | 45.0% | |
| ACTAATACTAGGCTGGGAGA+AGG | - | chr4_2:32827102-32827121 | None:intergenic | 45.0% | |
| ATGACAAAGGAAATGGCACC+AGG | - | chr4_2:32827231-32827250 | None:intergenic | 45.0% | |
| TTCCTTTGTCATAGCTGTCG+TGG | + | chr4_2:32827239-32827258 | Msa0598260:CDS | 45.0% | |
| TGTACCCCATTGTGAATCAG+TGG | + | chr4_2:32827373-32827392 | Msa0598260:intron | 45.0% | |
| !! | TGTTTCTAGATTAGGCCGGA+TGG | + | chr4_2:32827667-32827686 | Msa0598260:intron | 45.0% |
| TTCCCAGCTTCAATTCCATC+CGG | - | chr4_2:32827685-32827704 | None:intergenic | 45.0% | |
| GACAAGCCTTTCATGTTCTC+AGG | - | chr4_2:32827966-32827985 | None:intergenic | 45.0% | |
| GTTACTTACAACCCCCGTTA+TGG | + | chr4_2:32828222-32828241 | Msa0598260:intron | 45.0% | |
| ! | ACTCAAATTGTCATGGTGGG+TGG | + | chr4_2:32828370-32828389 | Msa0598260:intron | 45.0% |
| !! | TAGGTTCACTGGTTCATCGT+GGG | + | chr4_2:32828590-32828609 | Msa0598260:intron | 45.0% |
| ! | TCGTGGGCTACCATATTCTA+TGG | + | chr4_2:32828606-32828625 | Msa0598260:CDS | 45.0% |
| CTGGACTTGTGTTCACTTAC+AGG | - | chr4_2:32828656-32828675 | None:intergenic | 45.0% | |
| TTCTTCTTGGCAGCAACTGT+TGG | + | chr4_2:32828778-32828797 | Msa0598260:CDS | 45.0% | |
| !! | CAACTGTTGGTTTGGTCTCA+TGG | + | chr4_2:32828791-32828810 | Msa0598260:CDS | 45.0% |
| !! | GTTGGTTTGGTCTCATGGAT+AGG | + | chr4_2:32828796-32828815 | Msa0598260:CDS | 45.0% |
| !! | AACGCAAAGGCTAGCTTAAG+AGG | - | chr4_2:32829046-32829065 | None:intergenic | 45.0% |
| CTGCACATAACTCAACGCAA+AGG | - | chr4_2:32829059-32829078 | None:intergenic | 45.0% | |
| GCATGGTTACAGTTCACCTT+TGG | + | chr4_2:32829226-32829245 | Msa0598260:CDS | 45.0% | |
| ATTCCAAGATGGGAGAAGAC+TGG | - | chr4_2:32829432-32829451 | None:intergenic | 45.0% | |
| CGTATCCCCAACAATACACG+TGG | - | chr4_2:32824647-32824666 | None:intergenic | 50.0% | |
| ATAGCAACGTGATTGGACGG+TGG | - | chr4_2:32824678-32824697 | None:intergenic | 50.0% | |
| GTCGGGAATAGCAACGTGAT+TGG | - | chr4_2:32824685-32824704 | None:intergenic | 50.0% | |
| !! | TGCGGTGGTGTTGTTGACTT+AGG | - | chr4_2:32824868-32824887 | None:intergenic | 50.0% |
| GCGTAAGAGACGGTATTGTG+TGG | - | chr4_2:32824972-32824991 | None:intergenic | 50.0% | |
| AATTGGGTCGGCGTAAGAGA+CGG | - | chr4_2:32824982-32825001 | None:intergenic | 50.0% | |
| TCATTCTGATCCACCTCACC+AGG | + | chr4_2:32825018-32825037 | Msa0598260:CDS | 50.0% | |
| AGTGAGTGTAGGTACGTACC+TGG | - | chr4_2:32825039-32825058 | None:intergenic | 50.0% | |
| GAGTGTGAGTGAGTGAGTGT+AGG | - | chr4_2:32825050-32825069 | None:intergenic | 50.0% | |
| TCACTCACTCACACTCACAC+CGG | + | chr4_2:32825054-32825073 | Msa0598260:intron | 50.0% | |
| TATCAGCAGGGCTGTATCTG+AGG | + | chr4_2:32825492-32825511 | Msa0598260:intron | 50.0% | |
| ! | GGAGGTGTGCTTGTTGGTAA+TGG | + | chr4_2:32825904-32825923 | Msa0598260:intron | 50.0% |
| !!! | GGCCGTTTCTGAGATTTTGG+TGG | - | chr4_2:32826448-32826467 | None:intergenic | 50.0% |
| ! | GCAATGGTAGTGCAGACACT+TGG | + | chr4_2:32826864-32826883 | Msa0598260:CDS | 50.0% |
| ! | ATGCTGGAATCTGGCGCTTT+TGG | + | chr4_2:32827021-32827040 | Msa0598260:CDS | 50.0% |
| ! | TGCTGGAATCTGGCGCTTTT+GGG | + | chr4_2:32827022-32827041 | Msa0598260:CDS | 50.0% |
| CTACCTAACAGCATCTTGCC+TGG | + | chr4_2:32827210-32827229 | Msa0598260:CDS | 50.0% | |
| AGCCACGACAGCTATGACAA+AGG | - | chr4_2:32827244-32827263 | None:intergenic | 50.0% | |
| ! | GTGGATGCCTGTTTCTCAGA+TGG | + | chr4_2:32827819-32827838 | Msa0598260:CDS | 50.0% |
| ACGGGGGTTGTAAGTAACTC+AGG | - | chr4_2:32828220-32828239 | None:intergenic | 50.0% | |
| !! | CAAATTGTCATGGTGGGTGG+TGG | + | chr4_2:32828373-32828392 | Msa0598260:intron | 50.0% |
| !! | GTAGGTTCACTGGTTCATCG+TGG | + | chr4_2:32828589-32828608 | Msa0598260:intron | 50.0% |
| ! | CTTGGCAGCAACTGTTGGTT+TGG | + | chr4_2:32828783-32828802 | Msa0598260:CDS | 50.0% |
| TTGCGACAGGAATGGCTTTC+TGG | + | chr4_2:32829189-32829208 | Msa0598260:intron | 50.0% | |
| TGGAGAGACAGTGTAGTGCA+TGG | + | chr4_2:32829209-32829228 | Msa0598260:CDS | 50.0% | |
| GCTGCAGATGCAATACAGTG+TGG | - | chr4_2:32829355-32829374 | None:intergenic | 50.0% | |
| CACTGTATTGCATCTGCAGC+AGG | + | chr4_2:32829355-32829374 | Msa0598260:three_prime_UTR | 50.0% | |
| ACACCAGTCTTCTCCCATCT+TGG | + | chr4_2:32829426-32829445 | Msa0598260:three_prime_UTR | 50.0% | |
| TAGGTACGTACCTGGTGAGG+TGG | - | chr4_2:32825031-32825050 | None:intergenic | 55.0% | |
| GTGTAGGTACGTACCTGGTG+AGG | - | chr4_2:32825034-32825053 | None:intergenic | 55.0% | |
| ! | CAGAAACGGCCTTGTGCCTA+TGG | + | chr4_2:32826457-32826476 | Msa0598260:intron | 55.0% |
| GCACCAGGCAAGATGCTGTT+AGG | - | chr4_2:32827216-32827235 | None:intergenic | 55.0% | |
| AGCTGTCGTGGCTGTTACCA+TGG | + | chr4_2:32827251-32827270 | Msa0598260:CDS | 55.0% | |
| AGGCCGGATGGAATTGAAGC+TGG | + | chr4_2:32827679-32827698 | Msa0598260:intron | 55.0% | |
| GGCCGGATGGAATTGAAGCT+GGG | + | chr4_2:32827680-32827699 | Msa0598260:intron | 55.0% | |
| ! | AGCAGGGCTGTATCTGAGGC+AGG | + | chr4_2:32825496-32825515 | Msa0598260:intron | 60.0% |
| ! | GCAGGGCTGTATCTGAGGCA+GGG | + | chr4_2:32825497-32825516 | Msa0598260:intron | 60.0% |
| ! | TATCTGAGGCAGGGCGAGGA+GGG | + | chr4_2:32825506-32825525 | Msa0598260:intron | 60.0% |
| ! | GCTGTATCTGAGGCAGGGCG+AGG | + | chr4_2:32825502-32825521 | Msa0598260:intron | 65.0% |
| ! | GTATCTGAGGCAGGGCGAGG+AGG | + | chr4_2:32825505-32825524 | Msa0598260:intron | 65.0% |
| GCGAGGAGGGCGACCGTCTT+AGG | + | chr4_2:32825519-32825538 | Msa0598260:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 32824619 | 32829641 | 32824619 | ID=Msa0598260;Name=Msa0598260 |
| chr4_2 | mRNA | 32824619 | 32829641 | 32824619 | ID=Msa0598260-mRNA-1;Parent=Msa0598260;Name=Msa0598260-mRNA-1;_AED=0.05;_eAED=0.05;_QI=196|1|1|1|1|1|9|355|401 |
| chr4_2 | exon | 32824619 | 32825039 | 32824619 | ID=Msa0598260-mRNA-1:exon:7925;Parent=Msa0598260-mRNA-1 |
| chr4_2 | exon | 32825120 | 32825284 | 32825120 | ID=Msa0598260-mRNA-1:exon:7926;Parent=Msa0598260-mRNA-1 |
| chr4_2 | exon | 32826795 | 32827085 | 32826795 | ID=Msa0598260-mRNA-1:exon:7927;Parent=Msa0598260-mRNA-1 |
| chr4_2 | exon | 32827183 | 32827272 | 32827183 | ID=Msa0598260-mRNA-1:exon:7928;Parent=Msa0598260-mRNA-1 |
| chr4_2 | exon | 32827739 | 32827840 | 32827739 | ID=Msa0598260-mRNA-1:exon:7929;Parent=Msa0598260-mRNA-1 |
| chr4_2 | exon | 32827945 | 32828063 | 32827945 | ID=Msa0598260-mRNA-1:exon:7930;Parent=Msa0598260-mRNA-1 |
| chr4_2 | exon | 32828593 | 32828655 | 32828593 | ID=Msa0598260-mRNA-1:exon:7931;Parent=Msa0598260-mRNA-1 |
| chr4_2 | exon | 32828756 | 32828817 | 32828756 | ID=Msa0598260-mRNA-1:exon:7932;Parent=Msa0598260-mRNA-1 |
| chr4_2 | exon | 32829198 | 32829641 | 32829198 | ID=Msa0598260-mRNA-1:exon:7933;Parent=Msa0598260-mRNA-1 |
| chr4_2 | five_prime_UTR | 32824619 | 32824814 | 32824619 | ID=Msa0598260-mRNA-1:five_prime_utr;Parent=Msa0598260-mRNA-1 |
| chr4_2 | CDS | 32824815 | 32825039 | 32824815 | ID=Msa0598260-mRNA-1:cds;Parent=Msa0598260-mRNA-1 |
| chr4_2 | CDS | 32825120 | 32825284 | 32825120 | ID=Msa0598260-mRNA-1:cds;Parent=Msa0598260-mRNA-1 |
| chr4_2 | CDS | 32826795 | 32827085 | 32826795 | ID=Msa0598260-mRNA-1:cds;Parent=Msa0598260-mRNA-1 |
| chr4_2 | CDS | 32827183 | 32827272 | 32827183 | ID=Msa0598260-mRNA-1:cds;Parent=Msa0598260-mRNA-1 |
| chr4_2 | CDS | 32827739 | 32827840 | 32827739 | ID=Msa0598260-mRNA-1:cds;Parent=Msa0598260-mRNA-1 |
| chr4_2 | CDS | 32827945 | 32828063 | 32827945 | ID=Msa0598260-mRNA-1:cds;Parent=Msa0598260-mRNA-1 |
| chr4_2 | CDS | 32828593 | 32828655 | 32828593 | ID=Msa0598260-mRNA-1:cds;Parent=Msa0598260-mRNA-1 |
| chr4_2 | CDS | 32828756 | 32828817 | 32828756 | ID=Msa0598260-mRNA-1:cds;Parent=Msa0598260-mRNA-1 |
| chr4_2 | CDS | 32829198 | 32829286 | 32829198 | ID=Msa0598260-mRNA-1:cds;Parent=Msa0598260-mRNA-1 |
| chr4_2 | three_prime_UTR | 32829287 | 32829641 | 32829287 | ID=Msa0598260-mRNA-1:three_prime_utr;Parent=Msa0598260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
