Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0637910 | XP_013442451.1 | 93.532 | 402 | 18 | 5 | 5 | 401 | 6 | 404 | 0.0 | 722 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0637910 | sp|Q9LF50|MEX1_ARATH | 68.155 | 336 | 101 | 1 | 69 | 398 | 79 | 414 | 2.04e-164 | 470 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0637910 | A0A072TH01 | 93.532 | 402 | 18 | 5 | 5 | 401 | 6 | 404 | 0.0 | 722 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033050 | Msa0637910 | 0.826902 | 2.101988e-54 | -8.615850e-47 |
| Msa0045660 | Msa0637910 | 0.826929 | 2.071005e-54 | -8.615850e-47 |
| Msa0046360 | Msa0637910 | 0.811104 | 8.271725e-51 | -8.615850e-47 |
| Msa0046670 | Msa0637910 | 0.801550 | 8.540880e-49 | -8.615850e-47 |
| Msa0050880 | Msa0637910 | 0.806694 | 7.265388e-50 | -8.615850e-47 |
| Msa0105600 | Msa0637910 | 0.813037 | 3.134134e-51 | -8.615850e-47 |
| Msa0617560 | Msa0637910 | -0.804832 | 1.787560e-49 | -8.615850e-47 |
| Msa0622690 | Msa0637910 | 0.826273 | 2.969637e-54 | -8.615850e-47 |
| Msa0623270 | Msa0637910 | 0.802505 | 5.435672e-49 | -8.615850e-47 |
| Msa0626890 | Msa0637910 | 0.800243 | 1.579484e-48 | -8.615850e-47 |
| Msa0637910 | Msa0664110 | 0.803763 | 2.985108e-49 | -8.615850e-47 |
| Msa0637910 | Msa0664130 | 0.803520 | 3.352694e-49 | -8.615850e-47 |
| Msa0637910 | Msa0668160 | 0.828726 | 7.657249e-55 | -8.615850e-47 |
| Msa0637910 | Msa0685880 | 0.818126 | 2.306799e-52 | -8.615850e-47 |
| Msa0637910 | Msa0764020 | 0.802386 | 5.749745e-49 | -8.615850e-47 |
| Msa0637910 | Msa0789800 | 0.807586 | 4.700911e-50 | -8.615850e-47 |
| Msa0637910 | Msa0923820 | 0.808550 | 2.931281e-50 | -8.615850e-47 |
| Msa0637910 | Msa1018720 | 0.806024 | 1.005556e-49 | -8.615850e-47 |
| Msa0637910 | Msa1044450 | 0.804102 | 2.538330e-49 | -8.615850e-47 |
| Msa0637910 | Msa1050320 | 0.803536 | 3.326301e-49 | -8.615850e-47 |
| Msa0637910 | Msa1070780 | 0.828037 | 1.122934e-54 | -8.615850e-47 |
| Msa0637910 | Msa1125100 | 0.800104 | 1.685370e-48 | -8.615850e-47 |
| Msa0637910 | Msa1130650 | 0.801312 | 9.555839e-49 | -8.615850e-47 |
| Msa0637910 | Msa1147200 | 0.812399 | 4.324266e-51 | -8.615850e-47 |
| Msa0637910 | Msa1151970 | 0.818458 | 1.939630e-52 | -8.615850e-47 |
| Msa0637910 | Msa1165290 | 0.808754 | 2.651368e-50 | -8.615850e-47 |
| Msa0637910 | Msa1204390 | 0.810006 | 1.428476e-50 | -8.615850e-47 |
| Msa0637910 | Msa1227060 | 0.804667 | 1.935143e-49 | -8.615850e-47 |
| Msa0637910 | Msa1267330 | 0.813304 | 2.738558e-51 | -8.615850e-47 |
| Msa0637910 | Msa1319720 | 0.831622 | 1.503480e-55 | -8.615850e-47 |
| Msa0637910 | Msa1346920 | 0.808056 | 3.735185e-50 | -8.615850e-47 |
| Msa0637910 | Msa1348240 | 0.800984 | 1.114927e-48 | -8.615850e-47 |
| Msa0637910 | Msa1356460 | 0.806190 | 9.278901e-50 | -8.615850e-47 |
| Msa0637910 | Msa1371840 | 0.832182 | 1.093560e-55 | -8.615850e-47 |
| Msa0208400 | Msa0637910 | 0.812310 | 4.520747e-51 | -8.615850e-47 |
| Msa0208560 | Msa0637910 | 0.808789 | 2.606300e-50 | -8.615850e-47 |
| Msa0467710 | Msa0637910 | 0.808301 | 3.313295e-50 | -8.615850e-47 |
| Msa0250170 | Msa0637910 | 0.801460 | 8.912563e-49 | -8.615850e-47 |
| Msa0258380 | Msa0637910 | 0.803580 | 3.257297e-49 | -8.615850e-47 |
| Msa0266010 | Msa0637910 | 0.801375 | 9.276286e-49 | -8.615850e-47 |
| Msa0288220 | Msa0637910 | 0.801720 | 7.881864e-49 | -8.615850e-47 |
| Msa0301300 | Msa0637910 | 0.800308 | 1.531744e-48 | -8.615850e-47 |
| Msa0507190 | Msa0637910 | 0.805156 | 1.529091e-49 | -8.615850e-47 |
| Msa0558850 | Msa0637910 | 0.803067 | 4.159568e-49 | -8.615850e-47 |
| Msa0573300 | Msa0637910 | 0.804364 | 2.238766e-49 | -8.615850e-47 |
| Msa0573330 | Msa0637910 | 0.820055 | 8.397283e-53 | -8.615850e-47 |
| Msa0598260 | Msa0637910 | 0.991999 | 1.002647e-190 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0637910 | MtrunA17_Chr4g0021041 | 93.532 | 402 | 18 | 5 | 5 | 401 | 6 | 404 | 0.0 | 722 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0637910 | AT5G17520.1 | 68.155 | 336 | 101 | 1 | 69 | 398 | 79 | 414 | 2.08e-165 | 470 |
| Msa0637910 | AT5G17520.2 | 70.978 | 317 | 92 | 0 | 82 | 398 | 36 | 352 | 1.20e-163 | 463 |
| Msa0637910 | AT5G17523.1 | 60.390 | 154 | 55 | 1 | 69 | 216 | 79 | 232 | 3.61e-50 | 170 |
Find 111 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCGACAGGAATGGCTTTC+TGG | 0.160629 | 4_3:+31332321 | Msa0637910:intron |
| GTTTCCAGCAATGAGATTTC+TGG | 0.183789 | 4_3:-31328364 | None:intergenic |
| AAGAGCATTGAGAGTAAAAT+TGG | 0.190905 | 4_3:-31328128 | None:intergenic |
| ATGCTGGAATCTGGCGCTTT+TGG | 0.199585 | 4_3:+31330153 | Msa0637910:CDS |
| AAATTTGTTGGTGGAATATC+TGG | 0.287335 | 4_3:+31330904 | Msa0637910:CDS |
| CTTGGCAGCAACTGTTGGTT+TGG | 0.306600 | 4_3:+31331915 | Msa0637910:CDS |
| TGGGAAGATTTCATTACAAT+TGG | 0.310319 | 4_3:+31330173 | Msa0637910:CDS |
| CAAGATGCTGTTAGGTAGAT+AGG | 0.317684 | 4_3:-31330337 | None:intergenic |
| TGCGTGTATGTTGTTGTTGT+TGG | 0.322985 | 4_3:-31327838 | None:intergenic |
| TTTCAATTATGTGTATAGTA+TGG | 0.327121 | 4_3:+31332519 | Msa0637910:three_prime_UTR |
| TGGGGACAGAAATATGATTT+TGG | 0.328614 | 4_3:-31328081 | None:intergenic |
| GCTACCATATTCTATGGATA+TGG | 0.332128 | 4_3:+31331744 | Msa0637910:CDS |
| GCTTACTAAATGCTGGAATC+TGG | 0.333611 | 4_3:+31330144 | Msa0637910:CDS |
| TATCAACAAGGAATTCTTCT+TGG | 0.335994 | 4_3:+31331897 | Msa0637910:CDS |
| TCGTGGGCTACCATATTCTA+TGG | 0.338875 | 4_3:+31331738 | Msa0637910:CDS |
| GCGTGTATGTTGTTGTTGTT+GGG | 0.346180 | 4_3:-31327837 | None:intergenic |
| GGGAAGATTTCATTACAATT+GGG | 0.361219 | 4_3:+31330174 | Msa0637910:CDS |
| AATACTTACAATAAATATAA+TGG | 0.361946 | 4_3:-31332737 | None:intergenic |
| TCTGTGGCATTTGCAGTAAC+AGG | 0.364710 | 4_3:-31328329 | None:intergenic |
| CTGAATTTCATGAATTACTT+TGG | 0.367581 | 4_3:+31330122 | Msa0637910:CDS |
| ATTCCCATATCCATAGAATA+TGG | 0.373480 | 4_3:-31331748 | None:intergenic |
| CAACTGTTGGTTTGGTCTCA+TGG | 0.377532 | 4_3:+31331923 | Msa0637910:CDS |
| ATGAGGAAAAGGAGCATAAC+AGG | 0.377636 | 4_3:-31327960 | None:intergenic |
| TTGTGTTCACTTACAGGAAT+AGG | 0.378103 | 4_3:-31331779 | None:intergenic |
| GACAAGCCTTTCATGTTCTC+AGG | 0.395948 | 4_3:-31331095 | None:intergenic |
| GCATGGTTACAGTTCACCTT+TGG | 0.396273 | 4_3:+31332358 | Msa0637910:CDS |
| CTGAATCCACGTGTATTGTT+GGG | 0.397302 | 4_3:+31327770 | Msa0637910:five_prime_UTR |
| ATTTACTTACAGGCAAGAAC+TGG | 0.402272 | 4_3:+31330859 | Msa0637910:intron |
| TTGCTTGCAATGCTTGGAAA+TGG | 0.408232 | 4_3:+31331131 | Msa0637910:CDS |
| AATGCCAGAAATCTCATTGC+TGG | 0.409511 | 4_3:+31328360 | Msa0637910:CDS |
| TACTTTGGCTTACTAAATGC+TGG | 0.410058 | 4_3:+31330137 | Msa0637910:CDS |
| TCACTTACATCTAAATTCTC+TGG | 0.411129 | 4_3:+31328288 | Msa0637910:CDS |
| ATGTTGTTGTTGTTGGGGTC+GGG | 0.413245 | 4_3:-31327831 | None:intergenic |
| ACACCAGTCTTCTCCCATCT+TGG | 0.414554 | 4_3:+31332558 | Msa0637910:three_prime_UTR |
| ACGTTTACCATCTGAGAAAC+AGG | 0.420030 | 4_3:-31330958 | None:intergenic |
| TTCTTCTTGGCAGCAACTGT+TGG | 0.428308 | 4_3:+31331910 | Msa0637910:CDS |
| GAGAAAGGTGTTAAATTTGT+TGG | 0.432102 | 4_3:+31330892 | Msa0637910:CDS |
| AAATTTAAAGTTTGTGATGC+CGG | 0.435971 | 4_3:+31332411 | Msa0637910:exon |
| GCACCAGGCAAGATGCTGTT+AGG | 0.438842 | 4_3:-31330345 | None:intergenic |
| AACTATGATTGTAGGTTCAC+TGG | 0.442842 | 4_3:+31331711 | Msa0637910:intron |
| CACTGTATTGCATCTGCAGC+AGG | 0.445679 | 4_3:+31332487 | Msa0637910:three_prime_UTR |
| TATGTTGTTGTTGTTGGGGT+CGG | 0.447346 | 4_3:-31327832 | None:intergenic |
| CTCAATCCTGAGAACATGAA+AGG | 0.450928 | 4_3:+31331089 | Msa0637910:CDS |
| ACTGATGAAGTTTAGACATA+TGG | 0.454293 | 4_3:+31332434 | Msa0637910:three_prime_UTR |
| ATATGTTGTCATTGTTCAGT+TGG | 0.460317 | 4_3:+31330031 | Msa0637910:CDS |
| TCTATGTTGCTTGCAATGCT+TGG | 0.464120 | 4_3:+31331125 | Msa0637910:CDS |
| GTCGGGAATAGCAACGTGAT+TGG | 0.465849 | 4_3:-31327814 | None:intergenic |
| CTACCATATTCTATGGATAT+GGG | 0.466317 | 4_3:+31331745 | Msa0637910:CDS |
| TGAAATTGAAGATGAGGAAA+AGG | 0.469570 | 4_3:-31327971 | None:intergenic |
| CATTGTTCAGTTGGCATTAG+CGG | 0.471343 | 4_3:+31330040 | Msa0637910:CDS |
| CAGATATGACTATGAGCAAT+GGG | 0.471686 | 4_3:+31328263 | Msa0637910:CDS |
| GGAATGCTTACTAGTTTGCT+TGG | 0.475196 | 4_3:+31329927 | Msa0637910:CDS |
| GTTGGTTTGGTCTCATGGAT+AGG | 0.485772 | 4_3:+31331928 | Msa0637910:CDS |
| TCTGAATCCACGTGTATTGT+TGG | 0.486399 | 4_3:+31327769 | Msa0637910:five_prime_UTR |
| ACTTCAGTGGTTGTAGTGTC+AGG | 0.495916 | 4_3:+31330092 | Msa0637910:CDS |
| AAGATGCTGTTAGGTAGATA+GGG | 0.497941 | 4_3:-31330336 | None:intergenic |
| GACAGCTATGACAAAGGAAA+TGG | 0.500671 | 4_3:-31330367 | None:intergenic |
| ACTGGAAAACTTTCTGAGAA+AGG | 0.503327 | 4_3:+31330877 | Msa0637910:CDS |
| CTACCTAACAGCATCTTGCC+TGG | 0.509297 | 4_3:+31330342 | Msa0637910:CDS |
| CTTTGCCAAGAAGAGAGAAA+AGG | 0.511181 | 4_3:+31329971 | Msa0637910:CDS |
| GAAGAGAGAAAAGGAAGCAA+TGG | 0.519086 | 4_3:+31329980 | Msa0637910:CDS |
| GCATTTGCAGTAACAGGAAA+GGG | 0.520318 | 4_3:-31328323 | None:intergenic |
| CAATGACTCAATTCCAAGAT+GGG | 0.523169 | 4_3:-31332571 | None:intergenic |
| GGAAGATTTCATTACAATTG+GGG | 0.526329 | 4_3:+31330175 | Msa0637910:CDS |
| CAAAGTATGAAAGTAGTGAC+AGG | 0.529455 | 4_3:-31329953 | None:intergenic |
| ATAATAATTGATGAAACTCA+TGG | 0.534879 | 4_3:+31327937 | Msa0637910:exon |
| AGCTGTCGTGGCTGTTACCA+TGG | 0.536823 | 4_3:+31330383 | Msa0637910:CDS |
| TCAATGACTCAATTCCAAGA+TGG | 0.538239 | 4_3:-31332572 | None:intergenic |
| AAAGGTGTTAAATTTGTTGG+TGG | 0.539268 | 4_3:+31330895 | Msa0637910:CDS |
| ATGTCTAAACTTCATCAGTC+CGG | 0.541626 | 4_3:-31332430 | None:intergenic |
| AGGTGTTGAAATTGAAGATG+AGG | 0.543444 | 4_3:-31327977 | None:intergenic |
| TGCGGTGGTGTTGTTGACTT+AGG | 0.544946 | 4_3:-31327997 | None:intergenic |
| ATGACAAAGGAAATGGCACC+AGG | 0.553392 | 4_3:-31330360 | None:intergenic |
| AGCCACGACAGCTATGACAA+AGG | 0.558295 | 4_3:-31330373 | None:intergenic |
| AATTGGGTCGGCGTAAGAGA+CGG | 0.561241 | 4_3:-31328111 | None:intergenic |
| TAGGTTCACTGGTTCATCGT+GGG | 0.561359 | 4_3:+31331722 | Msa0637910:intron |
| TTCCTTTGTCATAGCTGTCG+TGG | 0.561699 | 4_3:+31330371 | Msa0637910:CDS |
| CAGTTTAAACATTATCAACA+AGG | 0.561755 | 4_3:+31331885 | Msa0637910:intron |
| ATTCCAAGATGGGAGAAGAC+TGG | 0.565918 | 4_3:-31332561 | None:intergenic |
| AGAGCATTGAGAGTAAAATT+GGG | 0.567139 | 4_3:-31328127 | None:intergenic |
| CGTAAGAGACGGTATTGTGT+GGG | 0.571118 | 4_3:-31328100 | None:intergenic |
| GCAGATATGACTATGAGCAA+TGG | 0.575223 | 4_3:+31328262 | Msa0637910:CDS |
| GGCATTTGCAGTAACAGGAA+AGG | 0.580392 | 4_3:-31328324 | None:intergenic |
| GCAATGGTAGTGCAGACACT+TGG | 0.582422 | 4_3:+31329996 | Msa0637910:CDS |
| CAATCTGGATACAGATAATG+TGG | 0.583147 | 4_3:+31330301 | Msa0637910:intron |
| TCATTCTGATCCACCTCACC+AGG | 0.590781 | 4_3:+31328150 | Msa0637910:CDS |
| GCGTAAGAGACGGTATTGTG+TGG | 0.591804 | 4_3:-31328101 | None:intergenic |
| GAAGAAGTGGGATATTTGTG+TGG | 0.594713 | 4_3:-31328028 | None:intergenic |
| CTGCTACGTTACTATTCATG+TGG | 0.604326 | 4_3:+31330932 | Msa0637910:CDS |
| TGAATCCACGTGTATTGTTG+GGG | 0.605461 | 4_3:+31327771 | Msa0637910:five_prime_UTR |
| GTGGATGCCTGTTTCTCAGA+TGG | 0.614756 | 4_3:+31330951 | Msa0637910:CDS |
| CGTGTATGTTGTTGTTGTTG+GGG | 0.617385 | 4_3:-31327836 | None:intergenic |
| CGTATCCCCAACAATACACG+TGG | 0.620044 | 4_3:-31327776 | None:intergenic |
| TGGAGAGACAGTGTAGTGCA+TGG | 0.624152 | 4_3:+31332341 | Msa0637910:CDS |
| CATTGAGAGTAAAATTGGGT+CGG | 0.625150 | 4_3:-31328123 | None:intergenic |
| TAGGTACGTACCTGGTGAGG+TGG | 0.625243 | 4_3:-31328160 | None:intergenic |
| AAGCATGATTACTTCAGTAG+AGG | 0.626595 | 4_3:-31332458 | None:intergenic |
| GAAGATTTCATTACAATTGG+GGG | 0.629398 | 4_3:+31330176 | Msa0637910:CDS |
| CTGGCATTAAGTAAAATCTG+TGG | 0.632705 | 4_3:-31328345 | None:intergenic |
| ATTTGTGTGGTAGAAAATTG+CGG | 0.636258 | 4_3:-31328015 | None:intergenic |
| AGATGCTGTTAGGTAGATAG+GGG | 0.646554 | 4_3:-31330335 | None:intergenic |
| TTGTTGGTGGAATATCTGGA+TGG | 0.651433 | 4_3:+31330908 | Msa0637910:CDS |
| GGAATAGCAACGTGATTGGA+CGG | 0.651889 | 4_3:-31327810 | None:intergenic |
| GTAGGTTCACTGGTTCATCG+TGG | 0.663007 | 4_3:+31331721 | Msa0637910:intron |
| AAGTCACGTAAAGAAGCCAA+AGG | 0.668827 | 4_3:-31332374 | None:intergenic |
| TCTCGAATGAATAAAGCACG+TGG | 0.680027 | 4_3:-31331164 | None:intergenic |
| GTAAGAGACGGTATTGTGTG+GGG | 0.684336 | 4_3:-31328099 | None:intergenic |
| GTGTAGGTACGTACCTGGTG+AGG | 0.714637 | 4_3:-31328163 | None:intergenic |
| TGTGTGGTAGAAAATTGCGG+TGG | 0.733276 | 4_3:-31328012 | None:intergenic |
| ATAGCAACGTGATTGGACGG+TGG | 0.744269 | 4_3:-31327807 | None:intergenic |
| GCTGCAGATGCAATACAGTG+TGG | 0.761311 | 4_3:-31332484 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATGTTTTTTTATTTTAACT+TGG | - | chr4_3:31329101-31329120 | None:intergenic | 10.0% |
| !! | AAGTTAAAATAAAAAAACAT+AGG | + | chr4_3:31329100-31329119 | Msa0637910:intron | 10.0% |
| !! | TTTATATACATTTATTAGTT+AGG | + | chr4_3:31329529-31329548 | Msa0637910:intron | 10.0% |
| !!! | TAGATTAGTTTTTTTTTTTT+TGG | + | chr4_3:31331391-31331410 | Msa0637910:intron | 10.0% |
| !!! | GTATTTTATCTATAAAATAA+AGG | - | chr4_3:31332255-31332274 | None:intergenic | 10.0% |
| !! | AATACTTACAATAAATATAA+TGG | - | chr4_3:31332740-31332759 | None:intergenic | 10.0% |
| !!! | ATATTTTAATTTTGTTACTG+TGG | + | chr4_3:31328472-31328491 | Msa0637910:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr4_3:31328828-31328847 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr4_3:31328852-31328871 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr4_3:31328851-31328870 | Msa0637910:intron | 15.0% |
| !!! | AAAACTAAGCAATATTTTTA+GGG | - | chr4_3:31329011-31329030 | None:intergenic | 15.0% |
| !!! | AAAAACTAAGCAATATTTTT+AGG | - | chr4_3:31329012-31329031 | None:intergenic | 15.0% |
| !!! | AAATATTGCTTAGTTTTTAA+AGG | + | chr4_3:31329014-31329033 | Msa0637910:intron | 15.0% |
| !!! | AATATTGCTTAGTTTTTAAA+GGG | + | chr4_3:31329015-31329034 | Msa0637910:intron | 15.0% |
| !! | TTAAAATAAAAAAACATAGG+TGG | + | chr4_3:31329103-31329122 | Msa0637910:intron | 15.0% |
| !! | AATAATCAAATATAACCTAA+AGG | - | chr4_3:31330423-31330442 | None:intergenic | 15.0% |
| !!! | TTTGAGATTTAATGAAAATT+TGG | - | chr4_3:31331243-31331262 | None:intergenic | 15.0% |
| !! | ATAATAATTGATGAAACTCA+TGG | + | chr4_3:31327937-31327956 | Msa0637910:exon | 20.0% |
| !! | TGATTAAATTCTTCAATTAC+CGG | - | chr4_3:31328208-31328227 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTGTTTTGTTTGA+AGG | + | chr4_3:31328230-31328249 | Msa0637910:intron | 20.0% |
| !!! | TTTGTTTTGTTTTGTTTGAA+GGG | + | chr4_3:31328231-31328250 | Msa0637910:intron | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr4_3:31328765-31328784 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr4_3:31328842-31328861 | Msa0637910:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | chr4_3:31328885-31328904 | None:intergenic | 20.0% |
| !! | ACCCCTAAAAAAAAAATATT+GGG | - | chr4_3:31328980-31328999 | None:intergenic | 20.0% |
| !! | ATCTTTCTCAATACATAAAA+TGG | - | chr4_3:31329380-31329399 | None:intergenic | 20.0% |
| !! | CTAATAACATATAACAATCT+GGG | - | chr4_3:31330609-31330628 | None:intergenic | 20.0% |
| !! | TTAAGTTATGTGTTTAACAT+TGG | - | chr4_3:31330642-31330661 | None:intergenic | 20.0% |
| !!! | TTTCATTTTCATTTACTTAC+AGG | + | chr4_3:31330849-31330868 | Msa0637910:intron | 20.0% |
| !!! | ATATATGATGAATGTTTTTG+TGG | + | chr4_3:31330982-31331001 | Msa0637910:intron | 20.0% |
| !! | TCATAAGAAAAAAATGCATA+GGG | - | chr4_3:31331038-31331057 | None:intergenic | 20.0% |
| !! | AAAAAAACTAATCTACAACA+AGG | - | chr4_3:31331386-31331405 | None:intergenic | 20.0% |
| !!! | GTGGTTCAATTTAAAATTTA+TGG | + | chr4_3:31331524-31331543 | Msa0637910:intron | 20.0% |
| !!! | GTTTGATTTGTATTTTGAAT+TGG | + | chr4_3:31332011-31332030 | Msa0637910:intron | 20.0% |
| !! | TTTCAATTATGTGTATAGTA+TGG | + | chr4_3:31332519-31332538 | Msa0637910:three_prime_UTR | 20.0% |
| !!! | GCCCCAATATTTTTTTTTTA+GGG | + | chr4_3:31328975-31328994 | Msa0637910:intron | 25.0% |
| ! | CCCCTAAAAAAAAAATATTG+GGG | - | chr4_3:31328979-31328998 | None:intergenic | 25.0% |
| !!! | CCCCAATATTTTTTTTTTAG+GGG | + | chr4_3:31328976-31328995 | Msa0637910:intron | 25.0% |
| ! | GACCCCTAAAAAAAAAATAT+TGG | - | chr4_3:31328981-31329000 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTAGGGGTCTATT+AGG | + | chr4_3:31328985-31329004 | Msa0637910:intron | 25.0% |
| ! | ACCATAACAATCACAATAAA+CGG | - | chr4_3:31329071-31329090 | None:intergenic | 25.0% |
| ! | GTGAGATTAAAAAAGAACAA+AGG | + | chr4_3:31329180-31329199 | Msa0637910:intron | 25.0% |
| ! | CTGAATTTCATGAATTACTT+TGG | + | chr4_3:31330122-31330141 | Msa0637910:CDS | 25.0% |
| !! | AATTTTACTAATACTAGGCT+GGG | - | chr4_3:31330240-31330259 | None:intergenic | 25.0% |
| !! | TAATTTTACTAATACTAGGC+TGG | - | chr4_3:31330241-31330260 | None:intergenic | 25.0% |
| !! | CGTCTAATTTTACTAATACT+AGG | - | chr4_3:31330245-31330264 | None:intergenic | 25.0% |
| !! | GTAATCTTCTTATTTCCTTT+AGG | + | chr4_3:31330405-31330424 | Msa0637910:intron | 25.0% |
| !!! | GAATTCATTTTGACATTTTG+AGG | - | chr4_3:31330576-31330595 | None:intergenic | 25.0% |
| ! | GCTAATAACATATAACAATC+TGG | - | chr4_3:31330610-31330629 | None:intergenic | 25.0% |
| ! | TGTTTAACATTGGTATGATA+GGG | - | chr4_3:31330632-31330651 | None:intergenic | 25.0% |
| ! | CATAAGAAAAAAATGCATAG+GGG | - | chr4_3:31331037-31331056 | None:intergenic | 25.0% |
| ! | GTCATAAGAAAAAAATGCAT+AGG | - | chr4_3:31331039-31331058 | None:intergenic | 25.0% |
| ! | TCCACTAGAAAACAAAAAAT+GGG | - | chr4_3:31331061-31331080 | None:intergenic | 25.0% |
| !! | TATTCATTCGAGATTTTATG+TGG | + | chr4_3:31331174-31331193 | Msa0637910:CDS | 25.0% |
| ! | ACAGTAATATGTAGAAAATG+AGG | + | chr4_3:31331475-31331494 | Msa0637910:intron | 25.0% |
| ! | CACAATAAATCAATTATCAC+TGG | - | chr4_3:31331590-31331609 | None:intergenic | 25.0% |
| ! | ACCTACAATCATAGTTAAAT+CGG | - | chr4_3:31331707-31331726 | None:intergenic | 25.0% |
| !!! | CTTGTTGATAATGTTTAAAC+TGG | - | chr4_3:31331887-31331906 | None:intergenic | 25.0% |
| ! | CAGTTTAAACATTATCAACA+AGG | + | chr4_3:31331885-31331904 | Msa0637910:intron | 25.0% |
| ! | GTGTTCACAATCAATAATTA+AGG | + | chr4_3:31332045-31332064 | Msa0637910:intron | 25.0% |
| ! | TTCACAATCAATAATTAAGG+TGG | + | chr4_3:31332048-31332067 | Msa0637910:intron | 25.0% |
| !! | GGTATAACTATTTTATGTAG+TGG | + | chr4_3:31332069-31332088 | Msa0637910:intron | 25.0% |
| ! | AGAGATGTTGTCAAATTATA+AGG | + | chr4_3:31332137-31332156 | Msa0637910:intron | 25.0% |
| ! | GAGATGTTGTCAAATTATAA+GGG | + | chr4_3:31332138-31332157 | Msa0637910:intron | 25.0% |
| ! | TAGATAAAATACTGCTGAAA+TGG | + | chr4_3:31332263-31332282 | Msa0637910:intron | 25.0% |
| !! | AAATTTAAAGTTTGTGATGC+CGG | + | chr4_3:31332411-31332430 | Msa0637910:exon | 25.0% |
| !! | GTAATTAATTAGCGTTTTAC+AGG | + | chr4_3:31332607-31332626 | Msa0637910:three_prime_UTR | 25.0% |
| TGAAATTGAAGATGAGGAAA+AGG | - | chr4_3:31327974-31327993 | None:intergenic | 30.0% | |
| ATTTGTGTGGTAGAAAATTG+CGG | - | chr4_3:31328018-31328037 | None:intergenic | 30.0% | |
| !! | CAGAAATATGATTTTGGTGA+AGG | - | chr4_3:31328078-31328097 | None:intergenic | 30.0% |
| !! | AGAGCATTGAGAGTAAAATT+GGG | - | chr4_3:31328130-31328149 | None:intergenic | 30.0% |
| !! | AAGAGCATTGAGAGTAAAAT+TGG | - | chr4_3:31328131-31328150 | None:intergenic | 30.0% |
| TCACTTACATCTAAATTCTC+TGG | + | chr4_3:31328288-31328307 | Msa0637910:CDS | 30.0% | |
| GATTTAAAAATTACCAGCCA+TGG | - | chr4_3:31328411-31328430 | None:intergenic | 30.0% | |
| TAAATCATACACTTGTCTTG+TGG | + | chr4_3:31328425-31328444 | Msa0637910:intron | 30.0% | |
| AAATCATACACTTGTCTTGT+GGG | + | chr4_3:31328426-31328445 | Msa0637910:intron | 30.0% | |
| TGTGCAGAATATTAATTGGA+GGG | - | chr4_3:31328799-31328818 | None:intergenic | 30.0% | |
| GTAGTGTGCAGAATATTAAT+TGG | - | chr4_3:31328803-31328822 | None:intergenic | 30.0% | |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr4_3:31328933-31328952 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr4_3:31328934-31328953 | Msa0637910:intron | 30.0% |
| !!! | GGCCCCAATATTTTTTTTTT+AGG | + | chr4_3:31328974-31328993 | Msa0637910:intron | 30.0% |
| !! | ATTGCTTAGTTTTTAAAGGG+AGG | + | chr4_3:31329018-31329037 | Msa0637910:intron | 30.0% |
| TCCGTTTATTGTGATTGTTA+TGG | + | chr4_3:31329067-31329086 | Msa0637910:intron | 30.0% | |
| TTTGCAAGAAGAAATTGCAA+AGG | + | chr4_3:31329215-31329234 | Msa0637910:intron | 30.0% | |
| !!! | AAACAGAATTTAGCTTTTCG+TGG | + | chr4_3:31329297-31329316 | Msa0637910:intron | 30.0% |
| !!! | TTTTTTCAGAGGAACTCAAA+AGG | - | chr4_3:31329637-31329656 | None:intergenic | 30.0% |
| GTACTTTAATCAAACATGCA+CGG | + | chr4_3:31329844-31329863 | Msa0637910:intron | 30.0% | |
| ATTGACAATCATGTCACTAA+AGG | - | chr4_3:31329903-31329922 | None:intergenic | 30.0% | |
| ATATGTTGTCATTGTTCAGT+TGG | + | chr4_3:31330031-31330050 | Msa0637910:CDS | 30.0% | |
| ACTGAAGTTGCTAAAAAGTA+CGG | - | chr4_3:31330080-31330099 | None:intergenic | 30.0% | |
| TGGGAAGATTTCATTACAAT+TGG | + | chr4_3:31330173-31330192 | Msa0637910:CDS | 30.0% | |
| GGGAAGATTTCATTACAATT+GGG | + | chr4_3:31330174-31330193 | Msa0637910:CDS | 30.0% | |
| GGAAGATTTCATTACAATTG+GGG | + | chr4_3:31330175-31330194 | Msa0637910:CDS | 30.0% | |
| GAAGATTTCATTACAATTGG+GGG | + | chr4_3:31330176-31330195 | Msa0637910:CDS | 30.0% | |
| AAGGAAAACACTATTACTTG+AGG | - | chr4_3:31330215-31330234 | None:intergenic | 30.0% | |
| CTGTATCCAGATTGTAAATT+GGG | - | chr4_3:31330295-31330314 | None:intergenic | 30.0% | |
| TCTGTATCCAGATTGTAAAT+TGG | - | chr4_3:31330296-31330315 | None:intergenic | 30.0% | |
| AGGAAATAAGAAGATTACCA+TGG | - | chr4_3:31330403-31330422 | None:intergenic | 30.0% | |
| ! | TTATTTCTCAGAACTTAGTC+CGG | + | chr4_3:31330438-31330457 | Msa0637910:intron | 30.0% |
| TAACATATAACAATCTGGGT+GGG | - | chr4_3:31330605-31330624 | None:intergenic | 30.0% | |
| ATAACATATAACAATCTGGG+TGG | - | chr4_3:31330606-31330625 | None:intergenic | 30.0% | |
| GTGTTTAACATTGGTATGAT+AGG | - | chr4_3:31330633-31330652 | None:intergenic | 30.0% | |
| AAGCACTTAAATGGAAATTC+AGG | - | chr4_3:31330672-31330691 | None:intergenic | 30.0% | |
| TGGTGAATTAAGCACTTAAA+TGG | - | chr4_3:31330681-31330700 | None:intergenic | 30.0% | |
| GTTAGCTAAACCAAGAAATT+TGG | + | chr4_3:31330764-31330783 | Msa0637910:intron | 30.0% | |
| !! | GAGAAAGGTGTTAAATTTGT+TGG | + | chr4_3:31330892-31330911 | Msa0637910:CDS | 30.0% |
| !! | AAAGGTGTTAAATTTGTTGG+TGG | + | chr4_3:31330895-31330914 | Msa0637910:CDS | 30.0% |
| !! | AAATTTGTTGGTGGAATATC+TGG | + | chr4_3:31330904-31330923 | Msa0637910:CDS | 30.0% |
| !!! | ACCCATTTTTTGTTTTCTAG+TGG | + | chr4_3:31331057-31331076 | Msa0637910:intron | 30.0% |
| GTCCACTAGAAAACAAAAAA+TGG | - | chr4_3:31331062-31331081 | None:intergenic | 30.0% | |
| AACAAGGATTTAACCATAAC+GGG | - | chr4_3:31331370-31331389 | None:intergenic | 30.0% | |
| CAACAAGGATTTAACCATAA+CGG | - | chr4_3:31331371-31331390 | None:intergenic | 30.0% | |
| ! | ACCGATTTAACTATGATTGT+AGG | + | chr4_3:31331703-31331722 | Msa0637910:intron | 30.0% |
| CTACCATATTCTATGGATAT+GGG | + | chr4_3:31331745-31331764 | Msa0637910:CDS | 30.0% | |
| ATTCCCATATCCATAGAATA+TGG | - | chr4_3:31331751-31331770 | None:intergenic | 30.0% | |
| TATCAACAAGGAATTCTTCT+TGG | + | chr4_3:31331897-31331916 | Msa0637910:CDS | 30.0% | |
| AGATAATATGATTGCTCAAG+AGG | - | chr4_3:31331958-31331977 | None:intergenic | 30.0% | |
| AAATGGCTTTCTGATTAAAG+TGG | + | chr4_3:31332280-31332299 | Msa0637910:intron | 30.0% | |
| ! | CATTTTTATGAAATTGCGAC+AGG | + | chr4_3:31332308-31332327 | Msa0637910:intron | 30.0% |
| !! | TCTTTACGTGACTTAGTTTT+TGG | + | chr4_3:31332383-31332402 | Msa0637910:CDS | 30.0% |
| ACTGATGAAGTTTAGACATA+TGG | + | chr4_3:31332434-31332453 | Msa0637910:three_prime_UTR | 30.0% | |
| !! | AGGTGTTGAAATTGAAGATG+AGG | - | chr4_3:31327980-31327999 | None:intergenic | 35.0% |
| GAAGAAGAAGAAGAAGAAGT+GGG | - | chr4_3:31328043-31328062 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAAGAAGAAG+TGG | - | chr4_3:31328044-31328063 | None:intergenic | 35.0% | |
| ! | TGGGGACAGAAATATGATTT+TGG | - | chr4_3:31328084-31328103 | None:intergenic | 35.0% |
| CATTGAGAGTAAAATTGGGT+CGG | - | chr4_3:31328126-31328145 | None:intergenic | 35.0% | |
| CAGATATGACTATGAGCAAT+GGG | + | chr4_3:31328263-31328282 | Msa0637910:CDS | 35.0% | |
| CTGGCATTAAGTAAAATCTG+TGG | - | chr4_3:31328348-31328367 | None:intergenic | 35.0% | |
| !!! | TTATTTTTTGGGGCCTAAGA+CGG | - | chr4_3:31328667-31328686 | None:intergenic | 35.0% |
| !!! | GAGGGAGTACTTATTTTTTG+GGG | - | chr4_3:31328677-31328696 | None:intergenic | 35.0% |
| !!! | GGAGGGAGTACTTATTTTTT+GGG | - | chr4_3:31328678-31328697 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr4_3:31328699-31328718 | None:intergenic | 35.0% |
| GTGTGCAGAATATTAATTGG+AGG | - | chr4_3:31328800-31328819 | None:intergenic | 35.0% | |
| TTAGTTAGGACCCAAATTGT+AGG | + | chr4_3:31329543-31329562 | Msa0637910:intron | 35.0% | |
| TAAGGTCATGTAATCTCCAT+AGG | - | chr4_3:31329608-31329627 | None:intergenic | 35.0% | |
| GAACTCAAAAGGTCTTCTTA+AGG | - | chr4_3:31329626-31329645 | None:intergenic | 35.0% | |
| !!! | AGGATCAGCTATTTTTTCAG+AGG | - | chr4_3:31329648-31329667 | None:intergenic | 35.0% |
| TTAATTCAGCCAAGTGAAGT+GGG | - | chr4_3:31329750-31329769 | None:intergenic | 35.0% | |
| ATTAATTCAGCCAAGTGAAG+TGG | - | chr4_3:31329751-31329770 | None:intergenic | 35.0% | |
| TTCACTTGGCTGAATTAATG+AGG | + | chr4_3:31329752-31329771 | Msa0637910:intron | 35.0% | |
| GTTGCTCTTATATCCTAATG+TGG | + | chr4_3:31329873-31329892 | Msa0637910:intron | 35.0% | |
| CAAAGTATGAAAGTAGTGAC+AGG | - | chr4_3:31329956-31329975 | None:intergenic | 35.0% | |
| !! | GTACTTTTTAGCAACTTCAG+TGG | + | chr4_3:31330079-31330098 | Msa0637910:CDS | 35.0% |
| ! | TACTTTGGCTTACTAAATGC+TGG | + | chr4_3:31330137-31330156 | Msa0637910:CDS | 35.0% |
| CATTACAATTGGGGGTTTAT+CGG | + | chr4_3:31330184-31330203 | Msa0637910:CDS | 35.0% | |
| TAAATTGGGAAATGCGAGTT+AGG | - | chr4_3:31330281-31330300 | None:intergenic | 35.0% | |
| GCATTTCCCAATTTACAATC+TGG | + | chr4_3:31330286-31330305 | Msa0637910:intron | 35.0% | |
| CAATCTGGATACAGATAATG+TGG | + | chr4_3:31330301-31330320 | Msa0637910:intron | 35.0% | |
| AAGATGCTGTTAGGTAGATA+GGG | - | chr4_3:31330339-31330358 | None:intergenic | 35.0% | |
| TATTTCTCAGAACTTAGTCC+GGG | + | chr4_3:31330439-31330458 | Msa0637910:intron | 35.0% | |
| ! | GTACATTTTATCATGCAACC+CGG | - | chr4_3:31330460-31330479 | None:intergenic | 35.0% |
| TGGGGTACAGTATTTGTAAT+GGG | - | chr4_3:31330494-31330513 | None:intergenic | 35.0% | |
| ATGGGGTACAGTATTTGTAA+TGG | - | chr4_3:31330495-31330514 | None:intergenic | 35.0% | |
| !! | TTCTTCCACTGATTCACAAT+GGG | - | chr4_3:31330513-31330532 | None:intergenic | 35.0% |
| !! | TTTCTTCCACTGATTCACAA+TGG | - | chr4_3:31330514-31330533 | None:intergenic | 35.0% |
| TTCACCAACTTATGCAAAAG+AGG | + | chr4_3:31330694-31330713 | Msa0637910:intron | 35.0% | |
| ! | TCATCCTCTTTTGCATAAGT+TGG | - | chr4_3:31330701-31330720 | None:intergenic | 35.0% |
| ACACGGAATTCCAAATTTCT+TGG | - | chr4_3:31330777-31330796 | None:intergenic | 35.0% | |
| CCTAATCTAGAAACAAGACA+CGG | - | chr4_3:31330794-31330813 | None:intergenic | 35.0% | |
| ATTTACTTACAGGCAAGAAC+TGG | + | chr4_3:31330859-31330878 | Msa0637910:intron | 35.0% | |
| ! | ACTGGAAAACTTTCTGAGAA+AGG | + | chr4_3:31330877-31330896 | Msa0637910:CDS | 35.0% |
| GATGAATTTGCAACAGTCAA+TGG | - | chr4_3:31331283-31331302 | None:intergenic | 35.0% | |
| ! | TCAGGAAATTTTCATGCGAA+TGG | - | chr4_3:31331334-31331353 | None:intergenic | 35.0% |
| ACAAGGATTTAACCATAACG+GGG | - | chr4_3:31331369-31331388 | None:intergenic | 35.0% | |
| !! | CAAGTTTGTTGTAGAATAGC+TGG | + | chr4_3:31331450-31331469 | Msa0637910:intron | 35.0% |
| !! | AGGTGTTACTCAAATTGTCA+TGG | + | chr4_3:31331495-31331514 | Msa0637910:intron | 35.0% |
| TGTTACTCAAATTGTCATGG+TGG | + | chr4_3:31331498-31331517 | Msa0637910:intron | 35.0% | |
| GTTACTCAAATTGTCATGGT+GGG | + | chr4_3:31331499-31331518 | Msa0637910:intron | 35.0% | |
| TGCAACACAGCATTTAGAAA+TGG | - | chr4_3:31331656-31331675 | None:intergenic | 35.0% | |
| AACTATGATTGTAGGTTCAC+TGG | + | chr4_3:31331711-31331730 | Msa0637910:intron | 35.0% | |
| GCTACCATATTCTATGGATA+TGG | + | chr4_3:31331744-31331763 | Msa0637910:CDS | 35.0% | |
| TTGTGTTCACTTACAGGAAT+AGG | - | chr4_3:31331782-31331801 | None:intergenic | 35.0% | |
| ! | TCCAGTTTTCATCTGCATTT+TGG | + | chr4_3:31331803-31331822 | Msa0637910:intron | 35.0% |
| ! | CCAGTTTTCATCTGCATTTT+GGG | + | chr4_3:31331804-31331823 | Msa0637910:intron | 35.0% |
| CATCTCTACTCTAGTTGTAT+GGG | - | chr4_3:31332124-31332143 | None:intergenic | 35.0% | |
| ACATCTCTACTCTAGTTGTA+TGG | - | chr4_3:31332125-31332144 | None:intergenic | 35.0% | |
| TTATGAAATTGCGACAGGAA+TGG | + | chr4_3:31332313-31332332 | Msa0637910:intron | 35.0% | |
| ATGTCTAAACTTCATCAGTC+CGG | - | chr4_3:31332433-31332452 | None:intergenic | 35.0% | |
| AAGCATGATTACTTCAGTAG+AGG | - | chr4_3:31332461-31332480 | None:intergenic | 35.0% | |
| CAATGACTCAATTCCAAGAT+GGG | - | chr4_3:31332574-31332593 | None:intergenic | 35.0% | |
| TCAATGACTCAATTCCAAGA+TGG | - | chr4_3:31332575-31332594 | None:intergenic | 35.0% | |
| TCTGAATCCACGTGTATTGT+TGG | + | chr4_3:31327769-31327788 | Msa0637910:five_prime_UTR | 40.0% | |
| CTGAATCCACGTGTATTGTT+GGG | + | chr4_3:31327770-31327789 | Msa0637910:five_prime_UTR | 40.0% | |
| TGAATCCACGTGTATTGTTG+GGG | + | chr4_3:31327771-31327790 | Msa0637910:five_prime_UTR | 40.0% | |
| ! | TATGTTGTTGTTGTTGGGGT+CGG | - | chr4_3:31327835-31327854 | None:intergenic | 40.0% |
| ! | CGTGTATGTTGTTGTTGTTG+GGG | - | chr4_3:31327839-31327858 | None:intergenic | 40.0% |
| ! | GCGTGTATGTTGTTGTTGTT+GGG | - | chr4_3:31327840-31327859 | None:intergenic | 40.0% |
| ! | TGCGTGTATGTTGTTGTTGT+TGG | - | chr4_3:31327841-31327860 | None:intergenic | 40.0% |
| ! | ATGAGGAAAAGGAGCATAAC+AGG | - | chr4_3:31327963-31327982 | None:intergenic | 40.0% |
| GAAGAAGTGGGATATTTGTG+TGG | - | chr4_3:31328031-31328050 | None:intergenic | 40.0% | |
| GCAGATATGACTATGAGCAA+TGG | + | chr4_3:31328262-31328281 | Msa0637910:CDS | 40.0% | |
| GCATTTGCAGTAACAGGAAA+GGG | - | chr4_3:31328326-31328345 | None:intergenic | 40.0% | |
| AATGCCAGAAATCTCATTGC+TGG | + | chr4_3:31328360-31328379 | Msa0637910:CDS | 40.0% | |
| GTTTCCAGCAATGAGATTTC+TGG | - | chr4_3:31328367-31328386 | None:intergenic | 40.0% | |
| !!! | CTGCTCTTTTTGCTATTCCA+TGG | + | chr4_3:31328391-31328410 | Msa0637910:CDS | 40.0% |
| !!! | TCTTTTTGCTATTCCATGGC+TGG | + | chr4_3:31328395-31328414 | Msa0637910:CDS | 40.0% |
| TATGAGTTGTGTGTATCAGC+AGG | + | chr4_3:31328611-31328630 | Msa0637910:intron | 40.0% | |
| ATGAGTTGTGTGTATCAGCA+GGG | + | chr4_3:31328612-31328631 | Msa0637910:intron | 40.0% | |
| !!! | CGGAGGGAGTACTTATTTTT+TGG | - | chr4_3:31328679-31328698 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr4_3:31328938-31328957 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr4_3:31328938-31328957 | Msa0637910:intron | 40.0% |
| ! | AACGGAGGGAGTATGAAATT+TGG | + | chr4_3:31328952-31328971 | Msa0637910:intron | 40.0% |
| ! | ACGGAGGGAGTATGAAATTT+GGG | + | chr4_3:31328953-31328972 | Msa0637910:intron | 40.0% |
| !! | TTAGCTTTTCGTGGATCTAG+TGG | + | chr4_3:31329306-31329325 | Msa0637910:intron | 40.0% |
| ! | ATGTCACAAGACAGGTTGAA+TGG | + | chr4_3:31329349-31329368 | Msa0637910:intron | 40.0% |
| TCGCATCTAGAAAATCTCGT+AGG | + | chr4_3:31329440-31329459 | Msa0637910:intron | 40.0% | |
| CTAGGACGAACCTACAATTT+GGG | - | chr4_3:31329556-31329575 | None:intergenic | 40.0% | |
| ATGTAATCTCCATAGGCACA+AGG | - | chr4_3:31329601-31329620 | None:intergenic | 40.0% | |
| GTCACATGTTCTCAAACTAG+AGG | - | chr4_3:31329668-31329687 | None:intergenic | 40.0% | |
| CACTAAAGGTCAACCACATT+AGG | - | chr4_3:31329889-31329908 | None:intergenic | 40.0% | |
| AGTGACATGATTGTCAATGC+AGG | + | chr4_3:31329905-31329924 | Msa0637910:intron | 40.0% | |
| GTGACATGATTGTCAATGCA+GGG | + | chr4_3:31329906-31329925 | Msa0637910:intron | 40.0% | |
| !! | GGAATGCTTACTAGTTTGCT+TGG | + | chr4_3:31329927-31329946 | Msa0637910:CDS | 40.0% |
| CTTTGCCAAGAAGAGAGAAA+AGG | + | chr4_3:31329971-31329990 | Msa0637910:CDS | 40.0% | |
| ! | TGCTTCCTTTTCTCTCTTCT+TGG | - | chr4_3:31329979-31329998 | None:intergenic | 40.0% |
| GAAGAGAGAAAAGGAAGCAA+TGG | + | chr4_3:31329980-31329999 | Msa0637910:CDS | 40.0% | |
| CATTGTTCAGTTGGCATTAG+CGG | + | chr4_3:31330040-31330059 | Msa0637910:CDS | 40.0% | |
| ! | GTTGCTAAAAAGTACGGCAA+AGG | - | chr4_3:31330074-31330093 | None:intergenic | 40.0% |
| GCTTACTAAATGCTGGAATC+TGG | + | chr4_3:31330144-31330163 | Msa0637910:CDS | 40.0% | |
| GGAAATGCGAGTTAGGAAAT+CGG | - | chr4_3:31330274-31330293 | None:intergenic | 40.0% | |
| AGATGCTGTTAGGTAGATAG+GGG | - | chr4_3:31330338-31330357 | None:intergenic | 40.0% | |
| CAAGATGCTGTTAGGTAGAT+AGG | - | chr4_3:31330340-31330359 | None:intergenic | 40.0% | |
| GACAGCTATGACAAAGGAAA+TGG | - | chr4_3:31330370-31330389 | None:intergenic | 40.0% | |
| !! | TCTTCCACTGATTCACAATG+GGG | - | chr4_3:31330512-31330531 | None:intergenic | 40.0% |
| !! | CCGTGTCTTGTTTCTAGATT+AGG | + | chr4_3:31330791-31330810 | Msa0637910:intron | 40.0% |
| !! | GTCTTGTTTCTAGATTAGGC+CGG | + | chr4_3:31330795-31330814 | Msa0637910:intron | 40.0% |
| TGGAATTGAAGCTGGGAAAT+AGG | + | chr4_3:31330819-31330838 | Msa0637910:intron | 40.0% | |
| ! | TTGTTGGTGGAATATCTGGA+TGG | + | chr4_3:31330908-31330927 | Msa0637910:CDS | 40.0% |
| CTGCTACGTTACTATTCATG+TGG | + | chr4_3:31330932-31330951 | Msa0637910:CDS | 40.0% | |
| ACGTTTACCATCTGAGAAAC+AGG | - | chr4_3:31330961-31330980 | None:intergenic | 40.0% | |
| CTCAATCCTGAGAACATGAA+AGG | + | chr4_3:31331089-31331108 | Msa0637910:CDS | 40.0% | |
| ! | TCTATGTTGCTTGCAATGCT+TGG | + | chr4_3:31331125-31331144 | Msa0637910:CDS | 40.0% |
| TTGCTTGCAATGCTTGGAAA+TGG | + | chr4_3:31331131-31331150 | Msa0637910:CDS | 40.0% | |
| TCTCGAATGAATAAAGCACG+TGG | - | chr4_3:31331167-31331186 | None:intergenic | 40.0% | |
| CAAGGATTTAACCATAACGG+GGG | - | chr4_3:31331368-31331387 | None:intergenic | 40.0% | |
| CCCAAAATGCAGATGAAAAC+TGG | - | chr4_3:31331807-31331826 | None:intergenic | 40.0% | |
| !! | TTTCATCTGCATTTTGGGTC+TGG | + | chr4_3:31331809-31331828 | Msa0637910:intron | 40.0% |
| AAGTCACGTAAAGAAGCCAA+AGG | - | chr4_3:31332377-31332396 | None:intergenic | 40.0% | |
| GGAATAGCAACGTGATTGGA+CGG | - | chr4_3:31327813-31327832 | None:intergenic | 45.0% | |
| ! | ATGTTGTTGTTGTTGGGGTC+GGG | - | chr4_3:31327834-31327853 | None:intergenic | 45.0% |
| TGTGTGGTAGAAAATTGCGG+TGG | - | chr4_3:31328015-31328034 | None:intergenic | 45.0% | |
| GTAAGAGACGGTATTGTGTG+GGG | - | chr4_3:31328102-31328121 | None:intergenic | 45.0% | |
| CGTAAGAGACGGTATTGTGT+GGG | - | chr4_3:31328103-31328122 | None:intergenic | 45.0% | |
| GGCATTTGCAGTAACAGGAA+AGG | - | chr4_3:31328327-31328346 | None:intergenic | 45.0% | |
| TCTGTGGCATTTGCAGTAAC+AGG | - | chr4_3:31328332-31328351 | None:intergenic | 45.0% | |
| ACACTTGTCTTGTGGGTTTC+AGG | + | chr4_3:31328433-31328452 | Msa0637910:intron | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr4_3:31328937-31328956 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr4_3:31328937-31328956 | Msa0637910:intron | 45.0% |
| ! | TTAAAGGGAGGTGTGCTTGT+TGG | + | chr4_3:31329030-31329049 | Msa0637910:intron | 45.0% |
| GATCGTCAATGTCACAAGAC+AGG | + | chr4_3:31329341-31329360 | Msa0637910:intron | 45.0% | |
| CCTAGGACGAACCTACAATT+TGG | - | chr4_3:31329557-31329576 | None:intergenic | 45.0% | |
| CCAAATTGTAGGTTCGTCCT+AGG | + | chr4_3:31329554-31329573 | Msa0637910:intron | 45.0% | |
| !!! | TTCTGAGATTTTGGTGGCCT+AGG | - | chr4_3:31329574-31329593 | None:intergenic | 45.0% |
| GGCCACCAAAATCTCAGAAA+CGG | + | chr4_3:31329575-31329594 | Msa0637910:intron | 45.0% | |
| !!! | CAAGGCCGTTTCTGAGATTT+TGG | - | chr4_3:31329583-31329602 | None:intergenic | 45.0% |
| TGAGAACATGTGACGTCACA+TGG | + | chr4_3:31329674-31329693 | Msa0637910:intron | 45.0% | |
| TCTTGCATACCCACTTCACT+TGG | + | chr4_3:31329738-31329757 | Msa0637910:intron | 45.0% | |
| TTAATCAAACATGCACGGCG+TGG | + | chr4_3:31329849-31329868 | Msa0637910:intron | 45.0% | |
| ACTTCAGTGGTTGTAGTGTC+AGG | + | chr4_3:31330092-31330111 | Msa0637910:CDS | 45.0% | |
| ACTAATACTAGGCTGGGAGA+AGG | - | chr4_3:31330234-31330253 | None:intergenic | 45.0% | |
| ATGACAAAGGAAATGGCACC+AGG | - | chr4_3:31330363-31330382 | None:intergenic | 45.0% | |
| TTCCTTTGTCATAGCTGTCG+TGG | + | chr4_3:31330371-31330390 | Msa0637910:CDS | 45.0% | |
| TGTACCCCATTGTGAATCAG+TGG | + | chr4_3:31330505-31330524 | Msa0637910:intron | 45.0% | |
| !! | TGTTTCTAGATTAGGCCGGA+TGG | + | chr4_3:31330799-31330818 | Msa0637910:intron | 45.0% |
| TTCCCAGCTTCAATTCCATC+CGG | - | chr4_3:31330817-31330836 | None:intergenic | 45.0% | |
| GACAAGCCTTTCATGTTCTC+AGG | - | chr4_3:31331098-31331117 | None:intergenic | 45.0% | |
| GTTACTTACAACCCCCGTTA+TGG | + | chr4_3:31331354-31331373 | Msa0637910:intron | 45.0% | |
| ! | ACTCAAATTGTCATGGTGGG+TGG | + | chr4_3:31331502-31331521 | Msa0637910:intron | 45.0% |
| !! | TAGGTTCACTGGTTCATCGT+GGG | + | chr4_3:31331722-31331741 | Msa0637910:intron | 45.0% |
| ! | TCGTGGGCTACCATATTCTA+TGG | + | chr4_3:31331738-31331757 | Msa0637910:CDS | 45.0% |
| CTGGACTTGTGTTCACTTAC+AGG | - | chr4_3:31331788-31331807 | None:intergenic | 45.0% | |
| TTCTTCTTGGCAGCAACTGT+TGG | + | chr4_3:31331910-31331929 | Msa0637910:CDS | 45.0% | |
| !! | CAACTGTTGGTTTGGTCTCA+TGG | + | chr4_3:31331923-31331942 | Msa0637910:CDS | 45.0% |
| !! | GTTGGTTTGGTCTCATGGAT+AGG | + | chr4_3:31331928-31331947 | Msa0637910:CDS | 45.0% |
| !! | AACGCAAAGGCTAGCTTAAG+AGG | - | chr4_3:31332178-31332197 | None:intergenic | 45.0% |
| CTGCACATAACTCAACGCAA+AGG | - | chr4_3:31332191-31332210 | None:intergenic | 45.0% | |
| GCATGGTTACAGTTCACCTT+TGG | + | chr4_3:31332358-31332377 | Msa0637910:CDS | 45.0% | |
| ATTCCAAGATGGGAGAAGAC+TGG | - | chr4_3:31332564-31332583 | None:intergenic | 45.0% | |
| CGTATCCCCAACAATACACG+TGG | - | chr4_3:31327779-31327798 | None:intergenic | 50.0% | |
| ATAGCAACGTGATTGGACGG+TGG | - | chr4_3:31327810-31327829 | None:intergenic | 50.0% | |
| GTCGGGAATAGCAACGTGAT+TGG | - | chr4_3:31327817-31327836 | None:intergenic | 50.0% | |
| !! | TGCGGTGGTGTTGTTGACTT+AGG | - | chr4_3:31328000-31328019 | None:intergenic | 50.0% |
| GCGTAAGAGACGGTATTGTG+TGG | - | chr4_3:31328104-31328123 | None:intergenic | 50.0% | |
| AATTGGGTCGGCGTAAGAGA+CGG | - | chr4_3:31328114-31328133 | None:intergenic | 50.0% | |
| TCATTCTGATCCACCTCACC+AGG | + | chr4_3:31328150-31328169 | Msa0637910:CDS | 50.0% | |
| AGTGAGTGTAGGTACGTACC+TGG | - | chr4_3:31328171-31328190 | None:intergenic | 50.0% | |
| GAGTGTGAGTGAGTGAGTGT+AGG | - | chr4_3:31328182-31328201 | None:intergenic | 50.0% | |
| TCACTCACTCACACTCACAC+CGG | + | chr4_3:31328186-31328205 | Msa0637910:intron | 50.0% | |
| TATCAGCAGGGCTGTATCTG+AGG | + | chr4_3:31328624-31328643 | Msa0637910:intron | 50.0% | |
| ! | GGAGGTGTGCTTGTTGGTAA+TGG | + | chr4_3:31329036-31329055 | Msa0637910:intron | 50.0% |
| !!! | GGCCGTTTCTGAGATTTTGG+TGG | - | chr4_3:31329580-31329599 | None:intergenic | 50.0% |
| ! | GCAATGGTAGTGCAGACACT+TGG | + | chr4_3:31329996-31330015 | Msa0637910:CDS | 50.0% |
| ! | ATGCTGGAATCTGGCGCTTT+TGG | + | chr4_3:31330153-31330172 | Msa0637910:CDS | 50.0% |
| ! | TGCTGGAATCTGGCGCTTTT+GGG | + | chr4_3:31330154-31330173 | Msa0637910:CDS | 50.0% |
| CTACCTAACAGCATCTTGCC+TGG | + | chr4_3:31330342-31330361 | Msa0637910:CDS | 50.0% | |
| AGCCACGACAGCTATGACAA+AGG | - | chr4_3:31330376-31330395 | None:intergenic | 50.0% | |
| ! | GTGGATGCCTGTTTCTCAGA+TGG | + | chr4_3:31330951-31330970 | Msa0637910:CDS | 50.0% |
| ACGGGGGTTGTAAGTAACTC+AGG | - | chr4_3:31331352-31331371 | None:intergenic | 50.0% | |
| !! | CAAATTGTCATGGTGGGTGG+TGG | + | chr4_3:31331505-31331524 | Msa0637910:intron | 50.0% |
| !! | GTAGGTTCACTGGTTCATCG+TGG | + | chr4_3:31331721-31331740 | Msa0637910:intron | 50.0% |
| ! | CTTGGCAGCAACTGTTGGTT+TGG | + | chr4_3:31331915-31331934 | Msa0637910:CDS | 50.0% |
| TTGCGACAGGAATGGCTTTC+TGG | + | chr4_3:31332321-31332340 | Msa0637910:intron | 50.0% | |
| TGGAGAGACAGTGTAGTGCA+TGG | + | chr4_3:31332341-31332360 | Msa0637910:CDS | 50.0% | |
| GCTGCAGATGCAATACAGTG+TGG | - | chr4_3:31332487-31332506 | None:intergenic | 50.0% | |
| CACTGTATTGCATCTGCAGC+AGG | + | chr4_3:31332487-31332506 | Msa0637910:three_prime_UTR | 50.0% | |
| ACACCAGTCTTCTCCCATCT+TGG | + | chr4_3:31332558-31332577 | Msa0637910:three_prime_UTR | 50.0% | |
| TAGGTACGTACCTGGTGAGG+TGG | - | chr4_3:31328163-31328182 | None:intergenic | 55.0% | |
| GTGTAGGTACGTACCTGGTG+AGG | - | chr4_3:31328166-31328185 | None:intergenic | 55.0% | |
| ! | CAGAAACGGCCTTGTGCCTA+TGG | + | chr4_3:31329589-31329608 | Msa0637910:intron | 55.0% |
| GCACCAGGCAAGATGCTGTT+AGG | - | chr4_3:31330348-31330367 | None:intergenic | 55.0% | |
| AGCTGTCGTGGCTGTTACCA+TGG | + | chr4_3:31330383-31330402 | Msa0637910:CDS | 55.0% | |
| AGGCCGGATGGAATTGAAGC+TGG | + | chr4_3:31330811-31330830 | Msa0637910:intron | 55.0% | |
| GGCCGGATGGAATTGAAGCT+GGG | + | chr4_3:31330812-31330831 | Msa0637910:intron | 55.0% | |
| ! | AGCAGGGCTGTATCTGAGGC+AGG | + | chr4_3:31328628-31328647 | Msa0637910:intron | 60.0% |
| ! | GCAGGGCTGTATCTGAGGCA+GGG | + | chr4_3:31328629-31328648 | Msa0637910:intron | 60.0% |
| ! | TATCTGAGGCAGGGCGAGGA+GGG | + | chr4_3:31328638-31328657 | Msa0637910:intron | 60.0% |
| ! | GCTGTATCTGAGGCAGGGCG+AGG | + | chr4_3:31328634-31328653 | Msa0637910:intron | 65.0% |
| ! | GTATCTGAGGCAGGGCGAGG+AGG | + | chr4_3:31328637-31328656 | Msa0637910:intron | 65.0% |
| GCGAGGAGGGCGACCGTCTT+AGG | + | chr4_3:31328651-31328670 | Msa0637910:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 31327751 | 31332773 | 31327751 | ID=Msa0637910;Name=Msa0637910 |
| chr4_3 | mRNA | 31327751 | 31332773 | 31327751 | ID=Msa0637910-mRNA-1;Parent=Msa0637910;Name=Msa0637910-mRNA-1;_AED=0.05;_eAED=0.05;_QI=196|1|1|1|1|1|9|355|401 |
| chr4_3 | exon | 31327751 | 31328171 | 31327751 | ID=Msa0637910-mRNA-1:exon:7325;Parent=Msa0637910-mRNA-1 |
| chr4_3 | exon | 31328252 | 31328416 | 31328252 | ID=Msa0637910-mRNA-1:exon:7326;Parent=Msa0637910-mRNA-1 |
| chr4_3 | exon | 31329927 | 31330217 | 31329927 | ID=Msa0637910-mRNA-1:exon:7327;Parent=Msa0637910-mRNA-1 |
| chr4_3 | exon | 31330315 | 31330404 | 31330315 | ID=Msa0637910-mRNA-1:exon:7328;Parent=Msa0637910-mRNA-1 |
| chr4_3 | exon | 31330871 | 31330972 | 31330871 | ID=Msa0637910-mRNA-1:exon:7329;Parent=Msa0637910-mRNA-1 |
| chr4_3 | exon | 31331077 | 31331195 | 31331077 | ID=Msa0637910-mRNA-1:exon:7330;Parent=Msa0637910-mRNA-1 |
| chr4_3 | exon | 31331725 | 31331787 | 31331725 | ID=Msa0637910-mRNA-1:exon:7331;Parent=Msa0637910-mRNA-1 |
| chr4_3 | exon | 31331888 | 31331949 | 31331888 | ID=Msa0637910-mRNA-1:exon:7332;Parent=Msa0637910-mRNA-1 |
| chr4_3 | exon | 31332330 | 31332773 | 31332330 | ID=Msa0637910-mRNA-1:exon:7333;Parent=Msa0637910-mRNA-1 |
| chr4_3 | five_prime_UTR | 31327751 | 31327946 | 31327751 | ID=Msa0637910-mRNA-1:five_prime_utr;Parent=Msa0637910-mRNA-1 |
| chr4_3 | CDS | 31327947 | 31328171 | 31327947 | ID=Msa0637910-mRNA-1:cds;Parent=Msa0637910-mRNA-1 |
| chr4_3 | CDS | 31328252 | 31328416 | 31328252 | ID=Msa0637910-mRNA-1:cds;Parent=Msa0637910-mRNA-1 |
| chr4_3 | CDS | 31329927 | 31330217 | 31329927 | ID=Msa0637910-mRNA-1:cds;Parent=Msa0637910-mRNA-1 |
| chr4_3 | CDS | 31330315 | 31330404 | 31330315 | ID=Msa0637910-mRNA-1:cds;Parent=Msa0637910-mRNA-1 |
| chr4_3 | CDS | 31330871 | 31330972 | 31330871 | ID=Msa0637910-mRNA-1:cds;Parent=Msa0637910-mRNA-1 |
| chr4_3 | CDS | 31331077 | 31331195 | 31331077 | ID=Msa0637910-mRNA-1:cds;Parent=Msa0637910-mRNA-1 |
| chr4_3 | CDS | 31331725 | 31331787 | 31331725 | ID=Msa0637910-mRNA-1:cds;Parent=Msa0637910-mRNA-1 |
| chr4_3 | CDS | 31331888 | 31331949 | 31331888 | ID=Msa0637910-mRNA-1:cds;Parent=Msa0637910-mRNA-1 |
| chr4_3 | CDS | 31332330 | 31332418 | 31332330 | ID=Msa0637910-mRNA-1:cds;Parent=Msa0637910-mRNA-1 |
| chr4_3 | three_prime_UTR | 31332419 | 31332773 | 31332419 | ID=Msa0637910-mRNA-1:three_prime_utr;Parent=Msa0637910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
