AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0288220


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0288220 MtrunA17_Chr2g0305781 96.774 527 6 3 1 517 21 546 0.0 1005
Msa0288220 MtrunA17_Chr7g0259761 28.369 423 270 14 101 499 118 531 1.49e-34 136
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0288220 AT2G18710.1 83.058 484 67 4 49 517 66 549 0.0 796
Msa0288220 AT2G31530.1 28.235 425 267 13 101 499 147 559 6.94e-33 132

Find 130 sgRNAs with CRISPR-Local

Find 239 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTGCTTACCTACCGTTTA+AGG 0.117513 2_3:+32577715 Msa0288220:CDS
TTATCAATCAATGGAAATTA+TGG 0.209023 2_3:+32578937 Msa0288220:three_prime_UTR
TGGAAATTATGGATATAATA+AGG 0.214103 2_3:+32578948 Msa0288220:three_prime_UTR
GAGGATAGTTCAATTGATTT+TGG 0.223790 2_3:+32576041 Msa0288220:CDS
CGTTGTTTATGAAAAGTTCT+TGG 0.267933 2_3:+32579068 Msa0288220:three_prime_UTR
TGCACACTTGACTGCATTCC+GGG 0.270529 2_3:+32578634 Msa0288220:CDS
AGGTTCCATTCCCAAGTTTC+AGG 0.271250 2_3:-32577392 None:intergenic
TCTTACTTGCCAGCTTCTTT+TGG 0.293036 2_3:+32577441 Msa0288220:CDS
AATCTAGACGCGTAGTTAAT+AGG 0.304266 2_3:-32577665 None:intergenic
AAACAAGACCAGACACAAAT+TGG 0.306488 2_3:-32579114 None:intergenic
TCTTAGTCGAATATCAGTTC+TGG 0.312877 2_3:+32578559 Msa0288220:CDS
ACTGCATTCCGGGGATTTGC+TGG 0.320442 2_3:+32578644 Msa0288220:CDS
GCTATCAAAAGTATGTTAAA+TGG 0.328201 2_3:-32578284 None:intergenic
ACATCTATTCTTATTCTTGT+TGG 0.328592 2_3:+32578668 Msa0288220:CDS
CTGCACACTTGACTGCATTC+CGG 0.330585 2_3:+32578633 Msa0288220:CDS
AGAATGAAGAACGTCAAAAT+AGG 0.336295 2_3:-32579014 None:intergenic
AATTGTTCGCTCACATCATC+TGG 0.339654 2_3:-32578344 None:intergenic
CTATTACACTTTCCTACAAC+TGG 0.344454 2_3:+32578319 Msa0288220:CDS
GTTCTATTCCAATTTGTGTC+TGG 0.346915 2_3:+32579106 Msa0288220:three_prime_UTR
GGAAACAACCAATCATTTAA+TGG 0.350131 2_3:-32578782 None:intergenic
TCCTTCTTTCTGTTGGTAGT+TGG 0.350967 2_3:+32577525 Msa0288220:CDS
CTTCTCCCCGGTGGTGTGTC+AGG 0.359427 2_3:+32575721 Msa0288220:CDS
ACATCATCGTTAGCTCTTCC+TGG 0.375335 2_3:+32577916 Msa0288220:CDS
GCAGTCTGCTCAACAATTGC+AGG 0.392772 2_3:-32578614 None:intergenic
AGTACTGACCATTAAATGAT+TGG 0.399337 2_3:+32578774 Msa0288220:exon
GGAAATTATGGATATAATAA+GGG 0.401392 2_3:+32578949 Msa0288220:three_prime_UTR
CAAATTACTGACCTGAAACT+TGG 0.408846 2_3:+32577381 Msa0288220:CDS
CCGTGATTACAACGTACATT+GGG 0.408942 2_3:+32577355 Msa0288220:CDS
CTTAGTCGAATATCAGTTCT+GGG 0.412406 2_3:+32578560 Msa0288220:CDS
TTCTGAAGATCTTGCAACTT+GGG 0.415468 2_3:-32576320 None:intergenic
TTCTTCAAAGGTCCTCTGCC+AGG 0.418038 2_3:+32576068 Msa0288220:CDS
CATCATCTGGATCCAGTTGT+AGG 0.418316 2_3:-32578331 None:intergenic
CATTGTGTCCTTCTTTCTGT+TGG 0.429476 2_3:+32577518 Msa0288220:CDS
TGCTCTGCAAAATTATATAC+AGG 0.433383 2_3:-32578839 None:intergenic
AGTTGGAATTGTCTATGTTC+AGG 0.434605 2_3:+32577542 Msa0288220:CDS
TTTGGCAGGTCAATAGTTCT+GGG 0.435453 2_3:+32577872 Msa0288220:intron
AGGAGTAGCAGCTGCAATAG+AGG 0.448637 2_3:+32576022 Msa0288220:CDS
ACCAATACCACCACCAGAAA+AGG 0.461774 2_3:-32576219 None:intergenic
TTTCTTGTATTGTCAAGGCT+TGG 0.462644 2_3:+32576113 Msa0288220:CDS
TGTTGGATTCGCCATTGTAC+AGG 0.467660 2_3:+32576397 Msa0288220:CDS
TACACTCGATATGCTTCTGT+TGG 0.467789 2_3:+32576380 Msa0288220:CDS
GCAAGTCGTGGCTCGTGGCC+CGG 0.468752 2_3:+32578971 Msa0288220:three_prime_UTR
TAGGGTTTCTTGTATTGTCA+AGG 0.468985 2_3:+32576108 Msa0288220:CDS
AGACTTGGTATATGCTCTCT+TGG 0.469242 2_3:+32576242 Msa0288220:CDS
CTGACACACCACCGGGGAGA+AGG 0.469346 2_3:-32575720 None:intergenic
TCTGTAATGTAAAGATCAAT+CGG 0.473409 2_3:+32578881 Msa0288220:three_prime_UTR
GATGATGTAGAAAATATGAT+AGG 0.473627 2_3:-32577901 None:intergenic
GGTACTTTAGCACGTTTCAC+TGG 0.478650 2_3:+32577937 Msa0288220:CDS
AAAGATAAGAGGACCTTAAA+CGG 0.479005 2_3:-32577728 None:intergenic
TTTCTGAAGATCTTGCAACT+TGG 0.479036 2_3:-32576321 None:intergenic
AGAGAGAGTGGCTCTGCAAA+TGG 0.479809 2_3:-32575775 None:intergenic
TATGTTAAATGGAAGATAGA+AGG 0.481243 2_3:-32578273 None:intergenic
GAACTAGGTTTATCAATCAA+TGG 0.481868 2_3:+32578928 Msa0288220:three_prime_UTR
TGACACACCACCGGGGAGAA+GGG 0.482934 2_3:-32575719 None:intergenic
TGGCTCGTGGCCCGGTGATG+TGG 0.484744 2_3:+32578979 Msa0288220:three_prime_UTR
TCAGTTGTTTGCATAGAACT+AGG 0.486363 2_3:+32578913 Msa0288220:three_prime_UTR
GTCGAGAAATTTGATAAAAG+TGG 0.486711 2_3:+32579150 Msa0288220:three_prime_UTR
TTAACTCTTCTTCTTCTACA+TGG 0.487212 2_3:+32575952 Msa0288220:CDS
TGTTGTAAAGTCATTTACAT+AGG 0.488090 2_3:-32577292 None:intergenic
GTTCTATGCAAACAACTGAA+TGG 0.491612 2_3:-32578909 None:intergenic
AAGAAGAGTTAATACCTAAC+GGG 0.496614 2_3:-32575941 None:intergenic
TCAAACATCTTCCACATCAC+CGG 0.498647 2_3:-32578990 None:intergenic
GACACACCACCGGGGAGAAG+GGG 0.501193 2_3:-32575718 None:intergenic
TCTGTTATCTTATTGACACT+TGG 0.501427 2_3:+32577330 Msa0288220:CDS
CAGAAAAGAGAAGGTGAGGC+TGG 0.502761 2_3:+32576338 Msa0288220:CDS
ATTAAGCCTGACACACCACC+GGG 0.509699 2_3:-32575727 None:intergenic
AGTGTAATAGTAGTTGAAGA+AGG 0.517143 2_3:-32578306 None:intergenic
GTGAAGTGAAGTGGTGGTTG+TGG 0.518973 2_3:+32575664 Msa0288220:five_prime_UTR
GCAGAGCCACTCTCTCTGTC+CGG 0.519848 2_3:+32575781 Msa0288220:CDS
TCCGTGATTACAACGTACAT+TGG 0.519948 2_3:+32577354 Msa0288220:CDS
TTGAGAAACTTCCCTGGCAG+AGG 0.521457 2_3:-32576080 None:intergenic
GTAGCGAATTTCGACCCGTT+AGG 0.521598 2_3:+32575927 Msa0288220:CDS
CAATTGCAGGTCCAGCAGCC+AGG 0.527328 2_3:-32578601 None:intergenic
GCTGCAGTAGCTTTGAATCC+AGG 0.527425 2_3:+32577979 Msa0288220:CDS
AATGTAGCTGTACTTCTGCC+TGG 0.528569 2_3:-32578401 None:intergenic
GTTGTAAAGTCATTTACATA+GGG 0.531063 2_3:-32577291 None:intergenic
ATGAAAAGTTCTTGGCAACA+AGG 0.531412 2_3:+32579076 Msa0288220:three_prime_UTR
AAATTACTGACCTGAAACTT+GGG 0.532762 2_3:+32577382 Msa0288220:CDS
CTCAACCTCATCTCTCTACC+AGG 0.538600 2_3:+32575820 Msa0288220:CDS
CCCAATGTACGTTGTAATCA+CGG 0.539847 2_3:-32577355 None:intergenic
TCCAACTACCAACAGAAAGA+AGG 0.539872 2_3:-32577526 None:intergenic
GAAGAAGAGTTAATACCTAA+CGG 0.545383 2_3:-32575942 None:intergenic
CTTGGTGTGTATATACCTCT+AGG 0.546349 2_3:+32576131 Msa0288220:CDS
CAGAAAGAAGGACACAATGA+TGG 0.551543 2_3:-32577514 None:intergenic
ACTGACCTGAAACTTGGGAA+TGG 0.555203 2_3:+32577387 Msa0288220:CDS
GGTGGTGGTATTGGTAGACT+TGG 0.556196 2_3:+32576227 Msa0288220:CDS
ACAATCTGTGCATTGATGAA+AGG 0.557062 2_3:-32576272 None:intergenic
ATGGAAGAAGATTGTTTGAG+AGG 0.560970 2_3:-32575756 None:intergenic
GAGTGGTAGTAGATATTCTC+CGG 0.560987 2_3:-32575800 None:intergenic
AATGTCCGACCAAAAGAAGC+TGG 0.561861 2_3:-32577450 None:intergenic
GGTAACAAGTCCGACATAGT+TGG 0.563139 2_3:-32577493 None:intergenic
TCTTCAGAAAAGAGAAGGTG+AGG 0.569860 2_3:+32576334 Msa0288220:CDS
CAAGATCTTCAGAAAAGAGA+AGG 0.570295 2_3:+32576329 Msa0288220:CDS
TATTAAGCCTGACACACCAC+CGG 0.570404 2_3:-32575728 None:intergenic
TCAATTCCACTTGTCAGACC+AGG 0.572539 2_3:+32578383 Msa0288220:CDS
CAAACATCTTCCACATCACC+GGG 0.573796 2_3:-32578989 None:intergenic
TTTAATGATGCCAACTATGT+CGG 0.578808 2_3:+32577483 Msa0288220:CDS
GCACACTTGACTGCATTCCG+GGG 0.581736 2_3:+32578635 Msa0288220:CDS
TAGATGTTCCAGCAAATCCC+CGG 0.583086 2_3:-32578652 None:intergenic
TCTTCAAAGGTCCTCTGCCA+GGG 0.584956 2_3:+32576069 Msa0288220:CDS
AAGAAGCTTCCCCTTCTCCC+CGG 0.592126 2_3:+32575709 Msa0288220:CDS
CTTCTGCCTGGTCTGACAAG+TGG 0.593403 2_3:-32578389 None:intergenic
AGCGAACAATTGAAACGTCA+AGG 0.598941 2_3:+32578356 Msa0288220:CDS
GTTTGTGAATATCAAAAGAG+AGG 0.599776 2_3:-32577412 None:intergenic
AGGGACGCAGGAAAAGAACT+TGG 0.600736 2_3:-32577272 None:intergenic
AAATGACTTTACAACAGAGT+GGG 0.605862 2_3:+32577299 Msa0288220:CDS
TAAATTTCTGACCTGTACAA+TGG 0.607947 2_3:-32576408 None:intergenic
ATAAGAGGACCTTAAACGGT+AGG 0.609391 2_3:-32577724 None:intergenic
TCTAGATTCACCAGCAAAAG+CGG 0.612020 2_3:+32577680 Msa0288220:CDS
GTGAAACGTGCTAAAGTACC+AGG 0.612842 2_3:-32577934 None:intergenic
AACTATAATTCTGTAGACAA+AGG 0.613035 2_3:-32578803 None:intergenic
AAAAGCTTGAGAAACTTCCC+TGG 0.613913 2_3:-32576086 None:intergenic
TATTCTCCGGACAGAGAGAG+TGG 0.622305 2_3:-32575787 None:intergenic
GGTAGAGAGATGAGGTTGAG+TGG 0.627551 2_3:-32575817 None:intergenic
TAAGGGCAAGTCGTGGCTCG+TGG 0.634757 2_3:+32578966 Msa0288220:three_prime_UTR
AAGCTTCCCCTTCTCCCCGG+TGG 0.643962 2_3:+32575712 Msa0288220:CDS
TTGGCAGGTCAATAGTTCTG+GGG 0.643969 2_3:+32577873 Msa0288220:intron
AGTCATTTACATAGGGACGC+AGG 0.644501 2_3:-32577284 None:intergenic
TAAATGACTTTACAACAGAG+TGG 0.657979 2_3:+32577298 Msa0288220:CDS
GCTGCTACTCCTCCTCCTCG+AGG 0.659044 2_3:-32576011 None:intergenic
AGATTCACCAGCAAAAGCGG+TGG 0.659232 2_3:+32577683 Msa0288220:CDS
TGGGAAGAAGTGAAGTGAAG+TGG 0.660930 2_3:+32575655 Msa0288220:five_prime_UTR
CGTGATTACAACGTACATTG+GGG 0.663302 2_3:+32577356 Msa0288220:CDS
GATATAATAAGGGCAAGTCG+TGG 0.693289 2_3:+32578959 Msa0288220:three_prime_UTR
GGTGTGTATATACCTCTAGG+TGG 0.698321 2_3:+32576134 Msa0288220:CDS
GAAGAAGTGAAGTGAAGTGG+TGG 0.704245 2_3:+32575658 Msa0288220:five_prime_UTR
GCAGTAGCTTTGAATCCAGG+AGG 0.714613 2_3:+32577982 Msa0288220:CDS
TCTCTGTTAACTCCACCTAG+AGG 0.718674 2_3:-32576146 None:intergenic
TCTAGGTGGAGTTAACAGAG+AGG 0.738479 2_3:+32576148 Msa0288220:CDS
TTAAGCCTGACACACCACCG+GGG 0.821315 2_3:-32575726 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATATAAAATATAATATA+TGG + chr2_3:32578529-32578548 Msa0288220:intron 0.0%
!!! GAATTTTATTATTATAAATC+CGG - chr2_3:32578026-32578045 None:intergenic 10.0%
!! TTGATTTCAAAATTAATTCA+TGG - chr2_3:32576862-32576881 None:intergenic 15.0%
!!! ATGAATTAATTTTGAAATCA+AGG + chr2_3:32576861-32576880 Msa0288220:intron 15.0%
!!! TGAATTAATTTTGAAATCAA+GGG + chr2_3:32576862-32576881 Msa0288220:intron 15.0%
!! ACAAAAACAAAATTATAAAC+TGG - chr2_3:32577225-32577244 None:intergenic 15.0%
!! AAAATGTACATTTAAGTAAA+GGG - chr2_3:32578244-32578263 None:intergenic 15.0%
!! AAAAATGTACATTTAAGTAA+AGG - chr2_3:32578245-32578264 None:intergenic 15.0%
!!! TGAAAATTTTAAAACTAGAA+AGG - chr2_3:32579263-32579282 None:intergenic 15.0%
!! TATTTGAATTCATGAAGAAA+AGG - chr2_3:32576498-32576517 None:intergenic 20.0%
!! AAACTTTGAATAAATCATGA+AGG - chr2_3:32576686-32576705 None:intergenic 20.0%
!! AGTAGAAAAAGATTTATGTT+AGG + chr2_3:32576814-32576833 Msa0288220:intron 20.0%
!! GTAGAAAAAGATTTATGTTA+GGG + chr2_3:32576815-32576834 Msa0288220:intron 20.0%
!! ATATTGTAATTACTGCATTT+AGG + chr2_3:32576941-32576960 Msa0288220:intron 20.0%
!! TATTGTAATTACTGCATTTA+GGG + chr2_3:32576942-32576961 Msa0288220:intron 20.0%
!! AGAAATGTTTGATGAAATAT+AGG + chr2_3:32578138-32578157 Msa0288220:intron 20.0%
!!! CTTAAATGTACATTTTTTGT+AGG + chr2_3:32578248-32578267 Msa0288220:intron 20.0%
!! TAAAATATAATATATGGTGC+AGG + chr2_3:32578535-32578554 Msa0288220:intron 20.0%
!! TTATCAATCAATGGAAATTA+TGG + chr2_3:32578937-32578956 Msa0288220:three_prime_UTR 20.0%
!! TGGAAATTATGGATATAATA+AGG + chr2_3:32578948-32578967 Msa0288220:three_prime_UTR 20.0%
!! GGAAATTATGGATATAATAA+GGG + chr2_3:32578949-32578968 Msa0288220:three_prime_UTR 20.0%
!!! GAAAGGTTTTTTTTAATACT+AGG - chr2_3:32579246-32579265 None:intergenic 20.0%
! ATTTGAAAATGAGGCAAAAA+TGG - chr2_3:32575887-32575906 None:intergenic 25.0%
!! ATTTTTGCCTCATTTTCAAA+TGG + chr2_3:32575886-32575905 Msa0288220:intron 25.0%
! ATACAATCCATTTGAAAATG+AGG - chr2_3:32575896-32575915 None:intergenic 25.0%
! TCTTCATGAATGATTCATAA+AGG + chr2_3:32576551-32576570 Msa0288220:intron 25.0%
!!! TCTTATTCTTTGAGATTCAT+AGG + chr2_3:32576652-32576671 Msa0288220:intron 25.0%
! CTTGTTGAGATAATGTTAAA+AGG + chr2_3:32576736-32576755 Msa0288220:intron 25.0%
!! TAACTTTAAAGAGTTACTCT+TGG + chr2_3:32576898-32576917 Msa0288220:intron 25.0%
! AGTAATTACAATATAGAGGA+GGG - chr2_3:32576935-32576954 None:intergenic 25.0%
! ATGCAGTAATTACAATATAG+AGG - chr2_3:32576939-32576958 None:intergenic 25.0%
! TATAACCAAGAGTCATTAAT+AGG - chr2_3:32576982-32577001 None:intergenic 25.0%
!! TGTTCTTCAATTTTCATTAC+AGG + chr2_3:32577242-32577261 Msa0288220:intron 25.0%
! GTTGTAAAGTCATTTACATA+GGG - chr2_3:32577294-32577313 None:intergenic 25.0%
! TGTTGTAAAGTCATTTACAT+AGG - chr2_3:32577295-32577314 None:intergenic 25.0%
! TACAGTAACATAAAAAAGGT+TGG - chr2_3:32577756-32577775 None:intergenic 25.0%
! GTACTACAGTAACATAAAAA+AGG - chr2_3:32577760-32577779 None:intergenic 25.0%
! TATCAAATACTATTCGAGTA+AGG - chr2_3:32577782-32577801 None:intergenic 25.0%
! GATGATGTAGAAAATATGAT+AGG - chr2_3:32577904-32577923 None:intergenic 25.0%
! ATGAAGAGACAAAAGTTTAA+GGG - chr2_3:32578212-32578231 None:intergenic 25.0%
! TATGAAGAGACAAAAGTTTA+AGG - chr2_3:32578213-32578232 None:intergenic 25.0%
! TATGTTAAATGGAAGATAGA+AGG - chr2_3:32578276-32578295 None:intergenic 25.0%
!! GCTATCAAAAGTATGTTAAA+TGG - chr2_3:32578287-32578306 None:intergenic 25.0%
! ATTAATCAGTAAGGAAATCA+AGG - chr2_3:32578467-32578486 None:intergenic 25.0%
! ATTAAGCGATGTAAAATGAA+TGG - chr2_3:32578514-32578533 None:intergenic 25.0%
! ACATCTATTCTTATTCTTGT+TGG + chr2_3:32578668-32578687 Msa0288220:CDS 25.0%
! AACTATAATTCTGTAGACAA+AGG - chr2_3:32578806-32578825 None:intergenic 25.0%
! TCTGTAATGTAAAGATCAAT+CGG + chr2_3:32578881-32578900 Msa0288220:three_prime_UTR 25.0%
AAGAAGAGTTAATACCTAAC+GGG - chr2_3:32575944-32575963 None:intergenic 30.0%
GAAGAAGAGTTAATACCTAA+CGG - chr2_3:32575945-32575964 None:intergenic 30.0%
TTAACTCTTCTTCTTCTACA+TGG + chr2_3:32575952-32575971 Msa0288220:CDS 30.0%
!! GAGGATAGTTCAATTGATTT+TGG + chr2_3:32576041-32576060 Msa0288220:CDS 30.0%
TAAATTTCTGACCTGTACAA+TGG - chr2_3:32576411-32576430 None:intergenic 30.0%
CAAGTGAAAAATGTCTTCAT+AGG + chr2_3:32576520-32576539 Msa0288220:intron 30.0%
ATTGAACGACTCCTATAATT+CGG - chr2_3:32576584-32576603 None:intergenic 30.0%
TGAAATCAAGGGATATGATT+TGG + chr2_3:32576873-32576892 Msa0288220:intron 30.0%
CAGTAATTACAATATAGAGG+AGG - chr2_3:32576936-32576955 None:intergenic 30.0%
ATTGTCCTATTAATGACTCT+TGG + chr2_3:32576974-32576993 Msa0288220:intron 30.0%
GCGACTAAATTACATATTGA+TGG - chr2_3:32577011-32577030 None:intergenic 30.0%
! TTTCTTGGAAAGTGTAAATG+AGG + chr2_3:32577061-32577080 Msa0288220:intron 30.0%
! TTCTTGGAAAGTGTAAATGA+GGG + chr2_3:32577062-32577081 Msa0288220:intron 30.0%
!! ATCCATGCTTTTTAATAGCT+AGG + chr2_3:32577155-32577174 Msa0288220:intron 30.0%
! CAATTTTCATTACAGGCTAT+TGG + chr2_3:32577249-32577268 Msa0288220:intron 30.0%
TAAATGACTTTACAACAGAG+TGG + chr2_3:32577298-32577317 Msa0288220:CDS 30.0%
AAATGACTTTACAACAGAGT+GGG + chr2_3:32577299-32577318 Msa0288220:CDS 30.0%
TCTGTTATCTTATTGACACT+TGG + chr2_3:32577330-32577349 Msa0288220:CDS 30.0%
AAATTACTGACCTGAAACTT+GGG + chr2_3:32577382-32577401 Msa0288220:CDS 30.0%
GTTTGTGAATATCAAAAGAG+AGG - chr2_3:32577415-32577434 None:intergenic 30.0%
TTTAATGATGCCAACTATGT+CGG + chr2_3:32577483-32577502 Msa0288220:CDS 30.0%
AAAGATAAGAGGACCTTAAA+CGG - chr2_3:32577731-32577750 None:intergenic 30.0%
!! AAAGGTTGGTAAAAGATAAG+AGG - chr2_3:32577742-32577761 None:intergenic 30.0%
ATCGACATTGTCAAATTTAG+AGG - chr2_3:32577845-32577864 None:intergenic 30.0%
! ACAATGTCGATGTTCTATTT+TGG + chr2_3:32577854-32577873 Msa0288220:intron 30.0%
AGTGTAATAGTAGTTGAAGA+AGG - chr2_3:32578309-32578328 None:intergenic 30.0%
! TTCCTTACTGATTAATATGC+TGG + chr2_3:32578471-32578490 Msa0288220:intron 30.0%
AACCAGCATATTAATCAGTA+AGG - chr2_3:32578476-32578495 None:intergenic 30.0%
! TATGCTGGTTAAAGAACTAT+TGG + chr2_3:32578486-32578505 Msa0288220:intron 30.0%
!! CTCTATGTTTTTGTACTTCT+GGG - chr2_3:32578738-32578757 None:intergenic 30.0%
!! ACTCTATGTTTTTGTACTTC+TGG - chr2_3:32578739-32578758 None:intergenic 30.0%
!! AGTACTGACCATTAAATGAT+TGG + chr2_3:32578774-32578793 Msa0288220:exon 30.0%
GGAAACAACCAATCATTTAA+TGG - chr2_3:32578785-32578804 None:intergenic 30.0%
TGCTCTGCAAAATTATATAC+AGG - chr2_3:32578842-32578861 None:intergenic 30.0%
GAACTAGGTTTATCAATCAA+TGG + chr2_3:32578928-32578947 Msa0288220:three_prime_UTR 30.0%
AGAATGAAGAACGTCAAAAT+AGG - chr2_3:32579017-32579036 None:intergenic 30.0%
CGTTGTTTATGAAAAGTTCT+TGG + chr2_3:32579068-32579087 Msa0288220:three_prime_UTR 30.0%
GTCGAGAAATTTGATAAAAG+TGG + chr2_3:32579150-32579169 Msa0288220:three_prime_UTR 30.0%
ATGGAAGAAGATTGTTTGAG+AGG - chr2_3:32575759-32575778 None:intergenic 35.0%
!! CAGACAGATTTGATTTTACC+TGG - chr2_3:32575841-32575860 None:intergenic 35.0%
!! GATTTTGGTGACTTCTTCAA+AGG + chr2_3:32576056-32576075 Msa0288220:CDS 35.0%
! GGAAGTTTCTCAAGCTTTTA+GGG + chr2_3:32576090-32576109 Msa0288220:CDS 35.0%
TAGGGTTTCTTGTATTGTCA+AGG + chr2_3:32576108-32576127 Msa0288220:CDS 35.0%
TTTCTTGTATTGTCAAGGCT+TGG + chr2_3:32576113-32576132 Msa0288220:CDS 35.0%
! AGAGGCTTTTCTTGGAAATT+TGG + chr2_3:32576166-32576185 Msa0288220:CDS 35.0%
! ACAATCTGTGCATTGATGAA+AGG - chr2_3:32576275-32576294 None:intergenic 35.0%
! TTCTGAAGATCTTGCAACTT+GGG - chr2_3:32576323-32576342 None:intergenic 35.0%
! TTTCTGAAGATCTTGCAACT+TGG - chr2_3:32576324-32576343 None:intergenic 35.0%
CAAGATCTTCAGAAAAGAGA+AGG + chr2_3:32576329-32576348 Msa0288220:CDS 35.0%
! AAGGTATCACACCGAATTAT+AGG + chr2_3:32576570-32576589 Msa0288220:intron 35.0%
TATATGCCTTCAACCTCAAA+GGG - chr2_3:32576610-32576629 None:intergenic 35.0%
ATATATGCCTTCAACCTCAA+AGG - chr2_3:32576611-32576630 None:intergenic 35.0%
!! TGCTTTCAAGTTCTCTTTCT+TGG + chr2_3:32577046-32577065 Msa0288220:intron 35.0%
TGTGCACTAGGAAAACATAT+CGG + chr2_3:32577117-32577136 Msa0288220:intron 35.0%
GACCTAGCTATTAAAAAGCA+TGG - chr2_3:32577160-32577179 None:intergenic 35.0%
CAAATTACTGACCTGAAACT+TGG + chr2_3:32577381-32577400 Msa0288220:CDS 35.0%
AGTTGGAATTGTCTATGTTC+AGG + chr2_3:32577542-32577561 Msa0288220:CDS 35.0%
AATCTAGACGCGTAGTTAAT+AGG - chr2_3:32577668-32577687 None:intergenic 35.0%
ATTCTTCTGCTTGAAATGTC+TGG + chr2_3:32578042-32578061 Msa0288220:intron 35.0%
AAGGTTTAACATCGAATGTC+AGG - chr2_3:32578069-32578088 None:intergenic 35.0%
CATAGAGCAACAAATGCAAA+AGG - chr2_3:32578088-32578107 None:intergenic 35.0%
CTATTACACTTTCCTACAAC+TGG + chr2_3:32578319-32578338 Msa0288220:CDS 35.0%
TCTTAGTCGAATATCAGTTC+TGG + chr2_3:32578559-32578578 Msa0288220:CDS 35.0%
CTTAGTCGAATATCAGTTCT+GGG + chr2_3:32578560-32578579 Msa0288220:CDS 35.0%
!!! AGTTCTGGGTTCAACATTTT+TGG + chr2_3:32578574-32578593 Msa0288220:CDS 35.0%
!!! TTCAACATTTTTGGCAATCC+TGG + chr2_3:32578583-32578602 Msa0288220:CDS 35.0%
GTTCTATGCAAACAACTGAA+TGG - chr2_3:32578912-32578931 None:intergenic 35.0%
TCAGTTGTTTGCATAGAACT+AGG + chr2_3:32578913-32578932 Msa0288220:three_prime_UTR 35.0%
ATGAAAAGTTCTTGGCAACA+AGG + chr2_3:32579076-32579095 Msa0288220:three_prime_UTR 35.0%
GTTCTATTCCAATTTGTGTC+TGG + chr2_3:32579106-32579125 Msa0288220:three_prime_UTR 35.0%
AAACAAGACCAGACACAAAT+TGG - chr2_3:32579117-32579136 None:intergenic 35.0%
! AGAAGGGGAAGCTTCTTTTA+CGG - chr2_3:32575706-32575725 None:intergenic 40.0%
GAGTGGTAGTAGATATTCTC+CGG - chr2_3:32575803-32575822 None:intergenic 40.0%
! TTTTACCTGGTAGAGAGATG+AGG - chr2_3:32575828-32575847 None:intergenic 40.0%
AAAAGCTTGAGAAACTTCCC+TGG - chr2_3:32576089-32576108 None:intergenic 40.0%
! GGGAAGTTTCTCAAGCTTTT+AGG + chr2_3:32576089-32576108 Msa0288220:CDS 40.0%
! CTTGGTGTGTATATACCTCT+AGG + chr2_3:32576131-32576150 Msa0288220:CDS 40.0%
! GTTAACAGAGAGGCTTTTCT+TGG + chr2_3:32576158-32576177 Msa0288220:CDS 40.0%
! AGACTTGGTATATGCTCTCT+TGG + chr2_3:32576242-32576261 Msa0288220:CDS 40.0%
TCTTCAGAAAAGAGAAGGTG+AGG + chr2_3:32576334-32576353 Msa0288220:CDS 40.0%
TACACTCGATATGCTTCTGT+TGG + chr2_3:32576380-32576399 Msa0288220:CDS 40.0%
!! AATTAGCCCTTTGAGGTTGA+AGG + chr2_3:32576601-32576620 Msa0288220:intron 40.0%
AGGCATATATGCAGGTTCAT+AGG + chr2_3:32576621-32576640 Msa0288220:intron 40.0%
TATATGCAGGTTCATAGGTG+TGG + chr2_3:32576626-32576645 Msa0288220:intron 40.0%
TCACCAGTGCTAGTATGTTT+AGG + chr2_3:32576787-32576806 Msa0288220:intron 40.0%
CTTCCTAAACATACTAGCAC+TGG - chr2_3:32576793-32576812 None:intergenic 40.0%
CAGTGCTAGTATGTTTAGGA+AGG + chr2_3:32576791-32576810 Msa0288220:intron 40.0%
TGTGATGTAGTGTTAAGTGC+TGG - chr2_3:32577182-32577201 None:intergenic 40.0%
TCCGTGATTACAACGTACAT+TGG + chr2_3:32577354-32577373 Msa0288220:CDS 40.0%
CCCAATGTACGTTGTAATCA+CGG - chr2_3:32577358-32577377 None:intergenic 40.0%
CCGTGATTACAACGTACATT+GGG + chr2_3:32577355-32577374 Msa0288220:CDS 40.0%
CGTGATTACAACGTACATTG+GGG + chr2_3:32577356-32577375 Msa0288220:CDS 40.0%
! TCTTACTTGCCAGCTTCTTT+TGG + chr2_3:32577441-32577460 Msa0288220:CDS 40.0%
CAGAAAGAAGGACACAATGA+TGG - chr2_3:32577517-32577536 None:intergenic 40.0%
CATTGTGTCCTTCTTTCTGT+TGG + chr2_3:32577518-32577537 Msa0288220:CDS 40.0%
!! TCCTTCTTTCTGTTGGTAGT+TGG + chr2_3:32577525-32577544 Msa0288220:CDS 40.0%
TCCAACTACCAACAGAAAGA+AGG - chr2_3:32577529-32577548 None:intergenic 40.0%
TTGCAACACTGATGATTCTC+AGG + chr2_3:32577625-32577644 Msa0288220:intron 40.0%
TCTAGATTCACCAGCAAAAG+CGG + chr2_3:32577680-32577699 Msa0288220:CDS 40.0%
ATCTGCTTACCTACCGTTTA+AGG + chr2_3:32577715-32577734 Msa0288220:CDS 40.0%
ATAAGAGGACCTTAAACGGT+AGG - chr2_3:32577727-32577746 None:intergenic 40.0%
!!! TGTCGATGTTCTATTTTGGC+AGG + chr2_3:32577858-32577877 Msa0288220:intron 40.0%
! TTTTGGCAGGTCAATAGTTC+TGG + chr2_3:32577871-32577890 Msa0288220:intron 40.0%
TTTGGCAGGTCAATAGTTCT+GGG + chr2_3:32577872-32577891 Msa0288220:intron 40.0%
!! GTATGTGGTTGGTTTATCTC+CGG + chr2_3:32578004-32578023 Msa0288220:intron 40.0%
! GCTGCAATACATTCTGGAAA+TGG + chr2_3:32578167-32578186 Msa0288220:intron 40.0%
AATTGTTCGCTCACATCATC+TGG - chr2_3:32578347-32578366 None:intergenic 40.0%
AGCGAACAATTGAAACGTCA+AGG + chr2_3:32578356-32578375 Msa0288220:CDS 40.0%
GATATAATAAGGGCAAGTCG+TGG + chr2_3:32578959-32578978 Msa0288220:three_prime_UTR 40.0%
TCAAACATCTTCCACATCAC+CGG - chr2_3:32578993-32579012 None:intergenic 40.0%
TGGGAAGAAGTGAAGTGAAG+TGG + chr2_3:32575655-32575674 Msa0288220:five_prime_UTR 45.0%
GAAGAAGTGAAGTGAAGTGG+TGG + chr2_3:32575658-32575677 Msa0288220:five_prime_UTR 45.0%
TATTAAGCCTGACACACCAC+CGG - chr2_3:32575731-32575750 None:intergenic 45.0%
GGTGTGTATATACCTCTAGG+TGG + chr2_3:32576134-32576153 Msa0288220:CDS 45.0%
TCTCTGTTAACTCCACCTAG+AGG - chr2_3:32576149-32576168 None:intergenic 45.0%
TCTAGGTGGAGTTAACAGAG+AGG + chr2_3:32576148-32576167 Msa0288220:CDS 45.0%
! AGCACTCTAGACTCCTTTTC+TGG + chr2_3:32576206-32576225 Msa0288220:CDS 45.0%
! ACTCTAGACTCCTTTTCTGG+TGG + chr2_3:32576209-32576228 Msa0288220:CDS 45.0%
!!! TCCTTTTCTGGTGGTGGTAT+TGG + chr2_3:32576218-32576237 Msa0288220:CDS 45.0%
ACCAATACCACCACCAGAAA+AGG - chr2_3:32576222-32576241 None:intergenic 45.0%
TGTTGGATTCGCCATTGTAC+AGG + chr2_3:32576397-32576416 Msa0288220:CDS 45.0%
GTCGTTCAATTAGCCCTTTG+AGG + chr2_3:32576594-32576613 Msa0288220:intron 45.0%
! GAGGTTGAAGGCATATATGC+AGG + chr2_3:32576613-32576632 Msa0288220:intron 45.0%
!! ACATACTAGCACTGGTGAGA+CGG - chr2_3:32576785-32576804 None:intergenic 45.0%
! GTTTTCCTAGTGCACAACAG+TGG - chr2_3:32577113-32577132 None:intergenic 45.0%
AGTCATTTACATAGGGACGC+AGG - chr2_3:32577287-32577306 None:intergenic 45.0%
ACTGACCTGAAACTTGGGAA+TGG + chr2_3:32577387-32577406 Msa0288220:CDS 45.0%
AGGTTCCATTCCCAAGTTTC+AGG - chr2_3:32577395-32577414 None:intergenic 45.0%
! ACTTGCCAGCTTCTTTTGGT+CGG + chr2_3:32577445-32577464 Msa0288220:CDS 45.0%
AATGTCCGACCAAAAGAAGC+TGG - chr2_3:32577453-32577472 None:intergenic 45.0%
GGTAACAAGTCCGACATAGT+TGG - chr2_3:32577496-32577515 None:intergenic 45.0%
! TTGGCAGGTCAATAGTTCTG+GGG + chr2_3:32577873-32577892 Msa0288220:intron 45.0%
! ACATCATCGTTAGCTCTTCC+TGG + chr2_3:32577916-32577935 Msa0288220:CDS 45.0%
! GTGAAACGTGCTAAAGTACC+AGG - chr2_3:32577937-32577956 None:intergenic 45.0%
GGTACTTTAGCACGTTTCAC+TGG + chr2_3:32577937-32577956 Msa0288220:CDS 45.0%
! CTTTGAATCCAGGAGGTATG+TGG + chr2_3:32577989-32578008 Msa0288220:intron 45.0%
TAAACCAACCACATACCTCC+TGG - chr2_3:32578000-32578019 None:intergenic 45.0%
CCAGAATGTATTGCAGCAGA+AGG - chr2_3:32578164-32578183 None:intergenic 45.0%
CCTTCTGCTGCAATACATTC+TGG + chr2_3:32578161-32578180 Msa0288220:intron 45.0%
CATCATCTGGATCCAGTTGT+AGG - chr2_3:32578334-32578353 None:intergenic 45.0%
TCAATTCCACTTGTCAGACC+AGG + chr2_3:32578383-32578402 Msa0288220:CDS 45.0%
AATGTAGCTGTACTTCTGCC+TGG - chr2_3:32578404-32578423 None:intergenic 45.0%
AGTAAGGAAATCAAGGAGCG+CGG - chr2_3:32578460-32578479 None:intergenic 45.0%
TAGATGTTCCAGCAAATCCC+CGG - chr2_3:32578655-32578674 None:intergenic 45.0%
CAAACATCTTCCACATCACC+GGG - chr2_3:32578992-32579011 None:intergenic 45.0%
GTGAAGTGAAGTGGTGGTTG+TGG + chr2_3:32575664-32575683 Msa0288220:five_prime_UTR 50.0%
ATTAAGCCTGACACACCACC+GGG - chr2_3:32575730-32575749 None:intergenic 50.0%
! AGAGAGAGTGGCTCTGCAAA+TGG - chr2_3:32575778-32575797 None:intergenic 50.0%
TATTCTCCGGACAGAGAGAG+TGG - chr2_3:32575790-32575809 None:intergenic 50.0%
GGTAGAGAGATGAGGTTGAG+TGG - chr2_3:32575820-32575839 None:intergenic 50.0%
CTCAACCTCATCTCTCTACC+AGG + chr2_3:32575820-32575839 Msa0288220:CDS 50.0%
GTAGCGAATTTCGACCCGTT+AGG + chr2_3:32575927-32575946 Msa0288220:CDS 50.0%
GAGAGCTCAGAAAAACCTCG+AGG + chr2_3:32575996-32576015 Msa0288220:CDS 50.0%
AGCTCAGAAAAACCTCGAGG+AGG + chr2_3:32575999-32576018 Msa0288220:CDS 50.0%
TCAGAAAAACCTCGAGGAGG+AGG + chr2_3:32576002-32576021 Msa0288220:CDS 50.0%
AGGAGTAGCAGCTGCAATAG+AGG + chr2_3:32576022-32576041 Msa0288220:CDS 50.0%
TTCTTCAAAGGTCCTCTGCC+AGG + chr2_3:32576068-32576087 Msa0288220:CDS 50.0%
TCTTCAAAGGTCCTCTGCCA+GGG + chr2_3:32576069-32576088 Msa0288220:CDS 50.0%
TTGAGAAACTTCCCTGGCAG+AGG - chr2_3:32576083-32576102 None:intergenic 50.0%
!! CTAGACTCCTTTTCTGGTGG+TGG + chr2_3:32576212-32576231 Msa0288220:CDS 50.0%
!! GGTGGTGGTATTGGTAGACT+TGG + chr2_3:32576227-32576246 Msa0288220:CDS 50.0%
CAGAAAAGAGAAGGTGAGGC+TGG + chr2_3:32576338-32576357 Msa0288220:CDS 50.0%
CTCAACCACTGTTGTGCACT+AGG + chr2_3:32577105-32577124 Msa0288220:intron 50.0%
AGGGACGCAGGAAAAGAACT+TGG - chr2_3:32577275-32577294 None:intergenic 50.0%
AGATTCACCAGCAAAAGCGG+TGG + chr2_3:32577683-32577702 Msa0288220:CDS 50.0%
!! TTCAAGTCCACCGCTTTTGC+TGG - chr2_3:32577693-32577712 None:intergenic 50.0%
!! GCTGCAGTAGCTTTGAATCC+AGG + chr2_3:32577979-32577998 Msa0288220:CDS 50.0%
!! GCAGTAGCTTTGAATCCAGG+AGG + chr2_3:32577982-32578001 Msa0288220:CDS 50.0%
! GAATCCAGGAGGTATGTGGT+TGG + chr2_3:32577993-32578012 Msa0288220:intron 50.0%
! TAAGGAAATCAAGGAGCGCG+GGG - chr2_3:32578458-32578477 None:intergenic 50.0%
! GTAAGGAAATCAAGGAGCGC+GGG - chr2_3:32578459-32578478 None:intergenic 50.0%
!! TTTTTGGCAATCCTGGCTGC+TGG + chr2_3:32578590-32578609 Msa0288220:CDS 50.0%
GCAGTCTGCTCAACAATTGC+AGG - chr2_3:32578617-32578636 None:intergenic 50.0%
CTGCACACTTGACTGCATTC+CGG + chr2_3:32578633-32578652 Msa0288220:CDS 50.0%
TGCACACTTGACTGCATTCC+GGG + chr2_3:32578634-32578653 Msa0288220:CDS 50.0%
AAGAAGCTTCCCCTTCTCCC+CGG + chr2_3:32575709-32575728 Msa0288220:CDS 55.0%
TTAAGCCTGACACACCACCG+GGG - chr2_3:32575729-32575748 None:intergenic 55.0%
CTTCTGCCTGGTCTGACAAG+TGG - chr2_3:32578392-32578411 None:intergenic 55.0%
GCACACTTGACTGCATTCCG+GGG + chr2_3:32578635-32578654 Msa0288220:CDS 55.0%
ACTGCATTCCGGGGATTTGC+TGG + chr2_3:32578644-32578663 Msa0288220:CDS 55.0%
TGACACACCACCGGGGAGAA+GGG - chr2_3:32575722-32575741 None:intergenic 60.0%
GCAGAGCCACTCTCTCTGTC+CGG + chr2_3:32575781-32575800 Msa0288220:CDS 60.0%
CAATTGCAGGTCCAGCAGCC+AGG - chr2_3:32578604-32578623 None:intergenic 60.0%
TAAGGGCAAGTCGTGGCTCG+TGG + chr2_3:32578966-32578985 Msa0288220:three_prime_UTR 60.0%
AAGCTTCCCCTTCTCCCCGG+TGG + chr2_3:32575712-32575731 Msa0288220:CDS 65.0%
GACACACCACCGGGGAGAAG+GGG - chr2_3:32575721-32575740 None:intergenic 65.0%
CTGACACACCACCGGGGAGA+AGG - chr2_3:32575723-32575742 None:intergenic 65.0%
CTTCTCCCCGGTGGTGTGTC+AGG + chr2_3:32575721-32575740 Msa0288220:CDS 65.0%
GCTGCTACTCCTCCTCCTCG+AGG - chr2_3:32576014-32576033 None:intergenic 65.0%
GCAAGTCGTGGCTCGTGGCC+CGG + chr2_3:32578971-32578990 Msa0288220:three_prime_UTR 70.0%
TGGCTCGTGGCCCGGTGATG+TGG + chr2_3:32578979-32578998 Msa0288220:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 32575653 32579328 32575653 ID=Msa0288220;Name=Msa0288220
chr2_3 mRNA 32575653 32579328 32575653 ID=Msa0288220-mRNA-1;Parent=Msa0288220;Name=Msa0288220-mRNA-1;_AED=0.07;_eAED=0.07;_QI=37|1|1|1|1|1|7|547|517
chr2_3 exon 32575653 32575841 32575653 ID=Msa0288220-mRNA-1:exon:10842;Parent=Msa0288220-mRNA-1
chr2_3 exon 32575920 32576418 32575920 ID=Msa0288220-mRNA-1:exon:10843;Parent=Msa0288220-mRNA-1
chr2_3 exon 32577264 32577563 32577264 ID=Msa0288220-mRNA-1:exon:10844;Parent=Msa0288220-mRNA-1
chr2_3 exon 32577647 32577736 32577647 ID=Msa0288220-mRNA-1:exon:10845;Parent=Msa0288220-mRNA-1
chr2_3 exon 32577880 32578003 32577880 ID=Msa0288220-mRNA-1:exon:10846;Parent=Msa0288220-mRNA-1
chr2_3 exon 32578270 32578433 32578270 ID=Msa0288220-mRNA-1:exon:10847;Parent=Msa0288220-mRNA-1
chr2_3 exon 32578557 32579328 32578557 ID=Msa0288220-mRNA-1:exon:10848;Parent=Msa0288220-mRNA-1
chr2_3 five_prime_UTR 32575653 32575689 32575653 ID=Msa0288220-mRNA-1:five_prime_utr;Parent=Msa0288220-mRNA-1
chr2_3 CDS 32575690 32575841 32575690 ID=Msa0288220-mRNA-1:cds;Parent=Msa0288220-mRNA-1
chr2_3 CDS 32575920 32576418 32575920 ID=Msa0288220-mRNA-1:cds;Parent=Msa0288220-mRNA-1
chr2_3 CDS 32577264 32577563 32577264 ID=Msa0288220-mRNA-1:cds;Parent=Msa0288220-mRNA-1
chr2_3 CDS 32577647 32577736 32577647 ID=Msa0288220-mRNA-1:cds;Parent=Msa0288220-mRNA-1
chr2_3 CDS 32577880 32578003 32577880 ID=Msa0288220-mRNA-1:cds;Parent=Msa0288220-mRNA-1
chr2_3 CDS 32578270 32578433 32578270 ID=Msa0288220-mRNA-1:cds;Parent=Msa0288220-mRNA-1
chr2_3 CDS 32578557 32578781 32578557 ID=Msa0288220-mRNA-1:cds;Parent=Msa0288220-mRNA-1
chr2_3 three_prime_UTR 32578782 32579328 32578782 ID=Msa0288220-mRNA-1:three_prime_utr;Parent=Msa0288220-mRNA-1
Gene Sequence

>Msa0288220

ATGATGTTGATAACCGTAAAAGAAGCTTCCCCTTCTCCCCGGTGGTGTGTCAGGCTTAATAATCGTCCTCTCAAACAATCTTCTTCCATTTGCAGAGCCACTCTCTCTGTCCGGAGAATATCTACTACCACTCAACCTCATCTCTCTACCAGCTATGACGTAGCGAATTTCGACCCGTTAGGTATTAACTCTTCTTCTTCTACATGGAAAAATATTGTGAGTTTGTTTGAGAGCTCAGAAAAACCTCGAGGAGGAGGAGTAGCAGCTGCAATAGAGGATAGTTCAATTGATTTTGGTGACTTCTTCAAAGGTCCTCTGCCAGGGAAGTTTCTCAAGCTTTTAGGGTTTCTTGTATTGTCAAGGCTTGGTGTGTATATACCTCTAGGTGGAGTTAACAGAGAGGCTTTTCTTGGAAATTTGGATCAGAATAGTTTGTTAAGCACTCTAGACTCCTTTTCTGGTGGTGGTATTGGTAGACTTGGTATATGCTCTCTTGGTATTGTTCCTTTCATCAATGCACAGATTGTTTTTCAGCTTCTTGCTCAAGTATATCCCAAGTTGCAAGATCTTCAGAAAAGAGAAGGTGAGGCTGGAAGAAAGAAAATTCTTCAGTACACTCGATATGCTTCTGTTGGATTCGCCATTGTACAGGCTATTGGCCAAGTTCTTTTCCTGCGTCCCTATGTAAATGACTTTACAACAGAGTGGGCTTTTACTTCTGTTATCTTATTGACACTTGGCTCCGTGATTACAACGTACATTGGGGAGCAAATTACTGACCTGAAACTTGGGAATGGAACCTCTCTTTTGATATTCACAAACATTATCTCTTACTTGCCAGCTTCTTTTGGTCGGACATTTGCACAAGCATTTAATGATGCCAACTATGTCGGACTTGTTACCATCATTGTGTCCTTCTTTCTGTTGGTAGTTGGAATTGTCTATGTTCAGGAAGCAGAGAGAAAAATTCCTATTAACTACGCGTCTAGATTCACCAGCAAAAGCGGTGGACTTGAAAAATCTGCTTACCTACCGTTTAAGGTCAATAGTTCTGGGGTAATGCCTATCATATTTTCTACATCATCGTTAGCTCTTCCTGGTACTTTAGCACGTTTCACTGGTTTAAGTGCACTAAAAAATGCTGCAGTAGCTTTGAATCCAGGAGGCTCCTTCTATCTTCCATTTAACATACTTTTGATAGCCTTCTTCAACTACTATTACACTTTCCTACAACTGGATCCAGATGATGTGAGCGAACAATTGAAACGTCAAGGTGCTTCAATTCCACTTGTCAGACCAGGCAGAAGTACAGCTACATTTATTAAAACAGTTCTTAGTCGAATATCAGTTCTGGGTTCAACATTTTTGGCAATCCTGGCTGCTGGACCTGCAATTGTTGAGCAGACTGCACACTTGACTGCATTCCGGGGATTTGCTGGAACATCTATTCTTATTCTTGTTGGTTGTGCAACAGACACTGCAAGAAAAGTTCGAGCTGAGATTATATCCCAGAAGTACAAAAACATAGAGTTATATGACTTTGATAAGTACTGA

Protein sequence

>Msa0288220

MMLITVKEASPSPRWCVRLNNRPLKQSSSICRATLSVRRISTTTQPHLSTSYDVANFDPLGINSSSSTWKNIVSLFESSEKPRGGGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLVLSRLGVYIPLGGVNREAFLGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKILQYTRYASVGFAIVQAIGQVLFLRPYVNDFTTEWAFTSVILLTLGSVITTYIGEQITDLKLGNGTSLLIFTNIISYLPASFGRTFAQAFNDANYVGLVTIIVSFFLLVVGIVYVQEAERKIPINYASRFTSKSGGLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSALKNAAVALNPGGSFYLPFNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGRSTATFIKTVLSRISVLGSTFLAILAAGPAIVEQTAHLTAFRGFAGTSILILVGCATDTARKVRAEIISQKYKNIELYDFDKY*