Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0161960 | XP_003590397.1 | 89.723 | 506 | 41 | 5 | 1 | 506 | 2 | 496 | 0.0 | 784 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0161960 | A7UQU9 | 89.723 | 506 | 41 | 5 | 1 | 506 | 2 | 496 | 0.0 | 784 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0161960 | TF | Trihelix |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010210 | Msa0161960 | 0.816906 | 4.343106e-52 | -8.615850e-47 |
| Msa0039750 | Msa0161960 | 0.827873 | 1.230291e-54 | -8.615850e-47 |
| Msa0089540 | Msa0161960 | 0.815200 | 1.044143e-51 | -8.615850e-47 |
| Msa0128340 | Msa0161960 | 0.800971 | 1.121725e-48 | -8.615850e-47 |
| Msa0128740 | Msa0161960 | 0.800265 | 1.563094e-48 | -8.615850e-47 |
| Msa0161960 | Msa0168380 | 0.801970 | 7.001966e-49 | -8.615850e-47 |
| Msa0161960 | Msa0221460 | -0.805794 | 1.123658e-49 | -8.615850e-47 |
| Msa0161960 | Msa0227790 | 0.818033 | 2.420579e-52 | -8.615850e-47 |
| Msa0161960 | Msa0261480 | 0.835066 | 2.082657e-56 | -8.615850e-47 |
| Msa0161960 | Msa0298400 | 0.816442 | 5.519632e-52 | -8.615850e-47 |
| Msa0161960 | Msa0300670 | -0.803213 | 3.880237e-49 | -8.615850e-47 |
| Msa0161960 | Msa0337760 | -0.802499 | 5.450486e-49 | -8.615850e-47 |
| Msa0161960 | Msa0372100 | 0.805897 | 1.069462e-49 | -8.615850e-47 |
| Msa0161960 | Msa0383930 | 0.806571 | 7.709798e-50 | -8.615850e-47 |
| Msa0161960 | Msa0384590 | 0.821559 | 3.785794e-53 | -8.615850e-47 |
| Msa0161960 | Msa0433630 | 0.817225 | 3.682360e-52 | -8.615850e-47 |
| Msa0161960 | Msa0434660 | 0.828227 | 1.010579e-54 | -8.615850e-47 |
| Msa0161960 | Msa0435280 | 0.802164 | 6.388850e-49 | -8.615850e-47 |
| Msa0161960 | Msa0469060 | 0.802078 | 6.654006e-49 | -8.615850e-47 |
| Msa0161960 | Msa0506750 | 0.810534 | 1.099153e-50 | -8.615850e-47 |
| Msa0161960 | Msa0521510 | 0.819359 | 1.210602e-52 | -8.615850e-47 |
| Msa0161960 | Msa0522540 | 0.819700 | 1.012178e-52 | -8.615850e-47 |
| Msa0161960 | Msa0541880 | 0.829318 | 5.503381e-55 | -8.615850e-47 |
| Msa0161960 | Msa0541940 | 0.820515 | 6.586672e-53 | -8.615850e-47 |
| Msa0161960 | Msa0575950 | 0.807059 | 6.082211e-50 | -8.615850e-47 |
| Msa0161960 | Msa0661480 | 0.819391 | 1.190624e-52 | -8.615850e-47 |
| Msa0161960 | Msa0685390 | -0.809161 | 2.169821e-50 | -8.615850e-47 |
| Msa0161960 | Msa0685610 | 0.825318 | 5.004639e-54 | -8.615850e-47 |
| Msa0161960 | Msa0857260 | 0.819433 | 1.164508e-52 | -8.615850e-47 |
| Msa0161960 | Msa0902270 | 0.828291 | 9.757374e-55 | -8.615850e-47 |
| Msa0161960 | Msa0970040 | 0.818478 | 1.920134e-52 | -8.615850e-47 |
| Msa0161960 | Msa0970100 | 0.822878 | 1.871416e-53 | -8.615850e-47 |
| Msa0161960 | Msa1025200 | 0.806479 | 8.062343e-50 | -8.615850e-47 |
| Msa0161960 | Msa1026710 | 0.811213 | 7.835082e-51 | -8.615850e-47 |
| Msa0161960 | Msa1134770 | 0.802592 | 5.214873e-49 | -8.615850e-47 |
| Msa0161960 | Msa1154630 | 0.801488 | 8.792982e-49 | -8.615850e-47 |
| Msa0161960 | Msa1379940 | 0.808136 | 3.592548e-50 | -8.615850e-47 |
| Msa0161960 | Msa1387450 | -0.801654 | 8.129548e-49 | -8.615850e-47 |
| Msa0161960 | Msa1420830 | 0.802488 | 5.478288e-49 | -8.615850e-47 |
| Msa0161960 | Msa1429810 | 0.816189 | 6.286792e-52 | -8.615850e-47 |
| Msa0161960 | Msa1431260 | 0.892692 | 1.255791e-74 | -8.615850e-47 |
| Msa0161960 | Msa1431270 | 0.882586 | 9.202807e-71 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0161960 | MtrunA17_Chr1g0179561 | 89.723 | 506 | 41 | 5 | 1 | 506 | 2 | 496 | 0.0 | 784 |
| Msa0161960 | MtrunA17_Chr7g0265561 | 55.804 | 491 | 161 | 11 | 1 | 488 | 1 | 438 | 9.94e-154 | 446 |
| Msa0161960 | MtrunA17_Chr2g0328901 | 39.563 | 412 | 181 | 9 | 85 | 490 | 64 | 413 | 4.38e-80 | 256 |
| Msa0161960 | MtrunA17_Chr1g0201951 | 35.443 | 474 | 236 | 13 | 38 | 491 | 24 | 447 | 4.21e-73 | 238 |
| Msa0161960 | MtrunA17_Chr6g0463911 | 64.085 | 142 | 49 | 2 | 118 | 258 | 106 | 246 | 1.46e-53 | 187 |
| Msa0161960 | MtrunA17_Chr6g0463911 | 52.000 | 75 | 36 | 0 | 415 | 489 | 368 | 442 | 4.89e-18 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0161960 | AT1G21200.1 | 48.611 | 216 | 85 | 5 | 65 | 257 | 30 | 242 | 3.78e-57 | 196 |
| Msa0161960 | AT1G21200.1 | 43.590 | 78 | 44 | 0 | 412 | 489 | 362 | 439 | 3.56e-15 | 78.2 |
| Msa0161960 | AT1G21200.2 | 48.611 | 216 | 85 | 5 | 65 | 257 | 30 | 242 | 3.78e-57 | 196 |
| Msa0161960 | AT1G21200.2 | 43.590 | 78 | 44 | 0 | 412 | 489 | 362 | 439 | 3.56e-15 | 78.2 |
| Msa0161960 | AT1G76870.2 | 49.206 | 189 | 86 | 3 | 70 | 257 | 28 | 207 | 1.51e-55 | 191 |
| Msa0161960 | AT1G76870.1 | 49.206 | 189 | 86 | 3 | 70 | 257 | 28 | 207 | 1.51e-55 | 191 |
| Msa0161960 | AT1G76870.3 | 49.206 | 189 | 86 | 3 | 70 | 257 | 28 | 207 | 1.51e-55 | 191 |
| Msa0161960 | AT3G10040.1 | 53.704 | 108 | 50 | 0 | 399 | 506 | 322 | 429 | 1.40e-31 | 126 |
Find 101 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCTTCAGCTTGAAAATT+TGG | 0.110218 | 1_4:+38072705 | None:intergenic |
| CTGTTGTTGATGTTTGTTCT+TGG | 0.169378 | 1_4:+38072764 | None:intergenic |
| CTAACTTCATCTTTCATCTT+AGG | 0.178877 | 1_4:+38072333 | None:intergenic |
| TCAAGGGCTATGATGGAAAA+AGG | 0.210514 | 1_4:-38072498 | Msa0161960:CDS |
| AGTTTAATGATTTGAATAAA+AGG | 0.261559 | 1_4:-38072443 | Msa0161960:CDS |
| GGTTTGAGAATGTTGAAAAT+TGG | 0.321507 | 1_4:-38072063 | Msa0161960:CDS |
| TCAAGGTTTGTTGGATTCAA+TGG | 0.337077 | 1_4:-38072364 | Msa0161960:CDS |
| ATCACTCCTTCTGGTTTGTT+AGG | 0.338445 | 1_4:-38072999 | Msa0161960:CDS |
| TTCCACTTCCACCTTCTACT+TGG | 0.350671 | 1_4:+38072214 | None:intergenic |
| TTGTTCTTGGATGAAGAAAA+TGG | 0.352317 | 1_4:+38072777 | None:intergenic |
| TTGAAAAGCAAAGGTTGAAA+TGG | 0.354388 | 1_4:-38071693 | Msa0161960:CDS |
| GAGAATGGTGTAGGGAGTTT+AGG | 0.360554 | 1_4:-38072102 | Msa0161960:CDS |
| CAGTTGGAGGAACAGAAAAT+AGG | 0.378255 | 1_4:-38071739 | Msa0161960:CDS |
| GTTGTTGTTGTTGGTGTAAA+GGG | 0.380586 | 1_4:+38072961 | None:intergenic |
| GATGAGGATGAAGGTGAATC+AGG | 0.392545 | 1_4:-38071979 | Msa0161960:CDS |
| AATGGTAAGGCTATTGATAA+TGG | 0.397789 | 1_4:-38072622 | Msa0161960:CDS |
| TGTGTCAGTGTCATGATGTT+GGG | 0.401350 | 1_4:+38072842 | None:intergenic |
| AAGATTAGAAAATGAGAGAA+TGG | 0.405714 | 1_4:-38071608 | Msa0161960:CDS |
| CTAAGATGAAAGATGAAGTT+AGG | 0.406494 | 1_4:-38072332 | Msa0161960:CDS |
| TAGCAAGAAAGAGAGGGAAA+TGG | 0.407922 | 1_4:-38071659 | Msa0161960:CDS |
| ATCTGTTTCAAGGGCTATGA+TGG | 0.408066 | 1_4:-38072505 | Msa0161960:CDS |
| AAGATGGAGGGAAGAGTCCT+TGG | 0.426883 | 1_4:-38071795 | Msa0161960:CDS |
| GTCATCTTCATCAACACAAT+TGG | 0.442088 | 1_4:-38071854 | Msa0161960:CDS |
| CACCATGGCAAAGAATGAAA+TGG | 0.442437 | 1_4:-38072653 | Msa0161960:CDS |
| GAAAGTGGAAATCTGTTTCA+AGG | 0.446222 | 1_4:-38072515 | Msa0161960:CDS |
| TGTAGAGTTGTTGAGAATCA+AGG | 0.448501 | 1_4:-38072381 | Msa0161960:CDS |
| TGTTGAGAATCAAGGTTTGT+TGG | 0.449421 | 1_4:-38072373 | Msa0161960:CDS |
| AAAAGCAATGGATAAGGAAC+AGG | 0.459093 | 1_4:-38071768 | Msa0161960:CDS |
| TGTTGTTGTTGTTGGTGTAA+AGG | 0.459607 | 1_4:+38072960 | None:intergenic |
| TCTTGAATGATGGAAGCTAA+TGG | 0.466883 | 1_4:-38073035 | None:intergenic |
| AGATGAGGAGGATGAGTCAG+AGG | 0.468825 | 1_4:-38072010 | Msa0161960:CDS |
| TAGTGGGTTGTTACAGAAGA+AGG | 0.473118 | 1_4:-38072538 | Msa0161960:CDS |
| TTAGGTGGTTCAAGAGGAGA+GGG | 0.474041 | 1_4:-38072084 | Msa0161960:CDS |
| GTCCATTTCATTCTTTGCCA+TGG | 0.478175 | 1_4:+38072651 | None:intergenic |
| TGAAAAGCAAAGGTTGAAAT+GGG | 0.482868 | 1_4:-38071692 | Msa0161960:CDS |
| CATTCATCAGAGAATGGTGT+AGG | 0.490758 | 1_4:-38072111 | Msa0161960:CDS |
| AGTGGTGTGTTTCAAGATGG+AGG | 0.493576 | 1_4:-38071808 | Msa0161960:CDS |
| TTTCAAGCTGAAGAAAGCTC+TGG | 0.499001 | 1_4:-38072699 | Msa0161960:CDS |
| TGTTGTTGATGCTGCTGTTG+AGG | 0.502837 | 1_4:+38072171 | None:intergenic |
| TCAGGAGAAGGTTGTTCAAA+GGG | 0.503478 | 1_4:-38071961 | Msa0161960:CDS |
| GAGCTAAACTTGAGAATGAA+AGG | 0.504094 | 1_4:-38071633 | Msa0161960:CDS |
| TTTAGGTGGTTCAAGAGGAG+AGG | 0.506295 | 1_4:-38072085 | Msa0161960:CDS |
| CAAGATGAAGAAGAGAATGA+TGG | 0.507615 | 1_4:-38071925 | Msa0161960:CDS |
| CACCAAGTAGAAGGTGGAAG+TGG | 0.508574 | 1_4:-38072216 | Msa0161960:CDS |
| CATCATCATTCAATGAAACA+TGG | 0.509386 | 1_4:-38072807 | Msa0161960:CDS |
| GGGAGTTTAGGTGGTTCAAG+AGG | 0.515573 | 1_4:-38072090 | Msa0161960:CDS |
| TATTACATTGGTGATGAAGC+TGG | 0.519299 | 1_4:-38072594 | Msa0161960:CDS |
| CATTTCAGCTTGAAAAGCAA+AGG | 0.520923 | 1_4:-38071702 | Msa0161960:CDS |
| GTGTGTCAGTGTCATGATGT+TGG | 0.523565 | 1_4:+38072841 | None:intergenic |
| AATGTTCAGCACCAAGTAGA+AGG | 0.528848 | 1_4:-38072225 | Msa0161960:CDS |
| GTGAATGATATACTTGGTAA+AGG | 0.529083 | 1_4:-38072411 | Msa0161960:CDS |
| TGCTGTTGAGGTTGATTCTG+AGG | 0.531228 | 1_4:+38072183 | None:intergenic |
| AATGAAATGGACTGATACAA+TGG | 0.534079 | 1_4:-38072640 | Msa0161960:CDS |
| GGTATAGTAGCAAGAAAGAG+AGG | 0.534687 | 1_4:-38071666 | Msa0161960:CDS |
| AACTTATCTTCACATTGTTG+AGG | 0.538324 | 1_4:+38072462 | None:intergenic |
| TGTTACAGAAGAAGGGAAAG+TGG | 0.544015 | 1_4:-38072530 | Msa0161960:CDS |
| ATAATGGCTGTTTATTACAT+TGG | 0.545685 | 1_4:-38072606 | Msa0161960:CDS |
| AGTTGTGGCCATGGTGGTGT+TGG | 0.546300 | 1_4:-38072255 | Msa0161960:CDS |
| AGAATGTTGAAAATTGGAAG+TGG | 0.548221 | 1_4:-38072057 | Msa0161960:CDS |
| AAGGAACAGGATAATGCAGT+TGG | 0.551721 | 1_4:-38071755 | Msa0161960:CDS |
| CAAATGAACAATGAAATAAG+TGG | 0.554110 | 1_4:-38071826 | Msa0161960:CDS |
| AGATGGAGGGAAGAGTCCTT+GGG | 0.557491 | 1_4:-38071794 | Msa0161960:CDS |
| TGAGGATGATGAAGATGAGG+AGG | 0.561727 | 1_4:-38072022 | Msa0161960:CDS |
| AATGGTGTAGGGAGTTTAGG+TGG | 0.562268 | 1_4:-38072099 | Msa0161960:CDS |
| GAACAGGATAATGCAGTTGG+AGG | 0.568779 | 1_4:-38071752 | Msa0161960:CDS |
| GAATGTTGAAAATTGGAAGT+GGG | 0.573309 | 1_4:-38072056 | Msa0161960:CDS |
| GTGGTGTGTTTCAAGATGGA+GGG | 0.573587 | 1_4:-38071807 | Msa0161960:CDS |
| GGGGAGCATAGGAAACAACT+TGG | 0.576375 | 1_4:+38072862 | None:intergenic |
| ATCAGGAGAAGGTTGTTCAA+AGG | 0.577261 | 1_4:-38071962 | Msa0161960:CDS |
| GATGAAGGTGAATCAGGAGA+AGG | 0.579225 | 1_4:-38071973 | Msa0161960:CDS |
| GTCATGATGTTGGGGAGCAT+AGG | 0.579377 | 1_4:+38072851 | None:intergenic |
| ATCATCATTCAATGAAACAT+GGG | 0.582829 | 1_4:-38072806 | Msa0161960:CDS |
| CAAGCTGAAGAAAGCTCTGG+TGG | 0.582867 | 1_4:-38072696 | Msa0161960:CDS |
| TCTTGGATGAAGAAAATGGA+GGG | 0.591048 | 1_4:+38072781 | None:intergenic |
| TCTAACAAATTTCATCTAGG+TGG | 0.592393 | 1_4:+38071513 | None:intergenic |
| AGATGAGGATGATGAAGATG+AGG | 0.592779 | 1_4:-38072025 | Msa0161960:CDS |
| AAGAGAGTGAATGATATACT+TGG | 0.593533 | 1_4:-38072417 | Msa0161960:CDS |
| AAAGTGGAAATCTGTTTCAA+GGG | 0.595878 | 1_4:-38072514 | Msa0161960:CDS |
| ATTCATCAGAGAATGGTGTA+GGG | 0.597498 | 1_4:-38072110 | Msa0161960:CDS |
| CATAGGAAACAACTTGGGAA+TGG | 0.599175 | 1_4:+38072868 | None:intergenic |
| TATCATAATAGTTGTGGCCA+TGG | 0.601280 | 1_4:-38072264 | Msa0161960:CDS |
| AATGGACTGATACAATGGTA+AGG | 0.602489 | 1_4:-38072635 | Msa0161960:CDS |
| AGTGGGTTGTTACAGAAGAA+GGG | 0.604261 | 1_4:-38072537 | Msa0161960:CDS |
| TGATATACTTGGTAAAGGAA+CGG | 0.611395 | 1_4:-38072406 | Msa0161960:CDS |
| AGCAAAGGTTGAAATGGGCA+AGG | 0.613121 | 1_4:-38071687 | Msa0161960:CDS |
| GTGTCAGTGTCATGATGTTG+GGG | 0.613275 | 1_4:+38072843 | None:intergenic |
| TGTTGAGGTTGATTCTGAGG+TGG | 0.615009 | 1_4:+38072186 | None:intergenic |
| TTCTTGGATGAAGAAAATGG+AGG | 0.615525 | 1_4:+38072780 | None:intergenic |
| TAACAAACCAGAAGGAGTGA+TGG | 0.616326 | 1_4:+38073001 | None:intergenic |
| CAAACCAGAAGGAGTGATGG+TGG | 0.618353 | 1_4:+38073004 | None:intergenic |
| GTATAGTAGCAAGAAAGAGA+GGG | 0.621792 | 1_4:-38071665 | Msa0161960:CDS |
| ATAAGTGGTGTGTTTCAAGA+TGG | 0.626979 | 1_4:-38071811 | Msa0161960:CDS |
| AAGTGGGGATGTTGAAGATG+AGG | 0.631886 | 1_4:-38072040 | Msa0161960:CDS |
| TGTGCTTATCATAATAGTTG+TGG | 0.640036 | 1_4:-38072270 | Msa0161960:CDS |
| GTTCAGCACCAAGTAGAAGG+TGG | 0.646983 | 1_4:-38072222 | Msa0161960:CDS |
| AATGTTGAAAATTGGAAGTG+GGG | 0.650508 | 1_4:-38072055 | Msa0161960:CDS |
| CATAATAGTTGTGGCCATGG+TGG | 0.659919 | 1_4:-38072261 | Msa0161960:CDS |
| ACTACTCCTAACAAACCAGA+AGG | 0.660583 | 1_4:+38072993 | None:intergenic |
| GGGAGCATAGGAAACAACTT+GGG | 0.683513 | 1_4:+38072863 | None:intergenic |
| TGGGAATGGTGCAAATGATG+AGG | 0.685441 | 1_4:+38072882 | None:intergenic |
| TAGAAGTACCAACACCACCA+TGG | 0.700740 | 1_4:+38072247 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTTAATGATTTGAATAAA+AGG | - | chr1_4:38072111-38072130 | Msa0161960:CDS | 15.0% |
| !! | AGTTTAATGATTTGAATAAA+AGG | - | chr1_4:38072111-38072130 | Msa0161960:CDS | 15.0% |
| ! | ATCATCATTCAATGAAACAT+GGG | - | chr1_4:38071748-38071767 | Msa0161960:CDS | 25.0% |
| ! | ATAATGGCTGTTTATTACAT+TGG | - | chr1_4:38071948-38071967 | Msa0161960:CDS | 25.0% |
| ! | CAAATAAGAAAAAGACTAGT+GGG | - | chr1_4:38072000-38072019 | Msa0161960:CDS | 25.0% |
| !! | ATTCTAAGCATCTTTTCTTT+AGG | - | chr1_4:38072255-38072274 | Msa0161960:CDS | 25.0% |
| !! | TTCTAAGCATCTTTTCTTTA+GGG | - | chr1_4:38072256-38072275 | Msa0161960:CDS | 25.0% |
| ! | CAAATGAACAATGAAATAAG+TGG | - | chr1_4:38072728-38072747 | Msa0161960:CDS | 25.0% |
| ! | AAGATTAGAAAATGAGAGAA+TGG | - | chr1_4:38072946-38072965 | Msa0161960:CDS | 25.0% |
| ! | ATCATCATTCAATGAAACAT+GGG | - | chr1_4:38071748-38071767 | Msa0161960:CDS | 25.0% |
| ! | ATAATGGCTGTTTATTACAT+TGG | - | chr1_4:38071948-38071967 | Msa0161960:CDS | 25.0% |
| ! | CAAATAAGAAAAAGACTAGT+GGG | - | chr1_4:38072000-38072019 | Msa0161960:CDS | 25.0% |
| !! | ATTCTAAGCATCTTTTCTTT+AGG | - | chr1_4:38072255-38072274 | Msa0161960:CDS | 25.0% |
| !! | TTCTAAGCATCTTTTCTTTA+GGG | - | chr1_4:38072256-38072275 | Msa0161960:CDS | 25.0% |
| ! | CAAATGAACAATGAAATAAG+TGG | - | chr1_4:38072728-38072747 | Msa0161960:CDS | 25.0% |
| ! | AAGATTAGAAAATGAGAGAA+TGG | - | chr1_4:38072946-38072965 | Msa0161960:CDS | 25.0% |
| ! | TGTTGTTGTTGTTGTTGATT+AGG | + | chr1_4:38071648-38071667 | None:intergenic | 30.0% |
| CATCATCATTCAATGAAACA+TGG | - | chr1_4:38071747-38071766 | Msa0161960:CDS | 30.0% | |
| TTGTTCTTGGATGAAGAAAA+TGG | + | chr1_4:38071780-38071799 | None:intergenic | 30.0% | |
| CTTTCTTCAGCTTGAAAATT+TGG | + | chr1_4:38071852-38071871 | None:intergenic | 30.0% | |
| ! | CATGGTGAAATCTTTCTTTT+TGG | + | chr1_4:38071888-38071907 | None:intergenic | 30.0% |
| CAAAAAGAAAGATTTCACCA+TGG | - | chr1_4:38071886-38071905 | Msa0161960:CDS | 30.0% | |
| !! | AATGAAATGGACTGATACAA+TGG | - | chr1_4:38071914-38071933 | Msa0161960:CDS | 30.0% |
| AATGGTAAGGCTATTGATAA+TGG | - | chr1_4:38071932-38071951 | Msa0161960:CDS | 30.0% | |
| !!! | CCACTAGTCTTTTTCTTATT+TGG | + | chr1_4:38072002-38072021 | None:intergenic | 30.0% |
| CCAAATAAGAAAAAGACTAG+TGG | - | chr1_4:38071999-38072018 | Msa0161960:CDS | 30.0% | |
| AAAGTGGAAATCTGTTTCAA+GGG | - | chr1_4:38072040-38072059 | Msa0161960:CDS | 30.0% | |
| AACTTATCTTCACATTGTTG+AGG | + | chr1_4:38072095-38072114 | None:intergenic | 30.0% | |
| AAGAGAGTGAATGATATACT+TGG | - | chr1_4:38072137-38072156 | Msa0161960:CDS | 30.0% | |
| GTGAATGATATACTTGGTAA+AGG | - | chr1_4:38072143-38072162 | Msa0161960:CDS | 30.0% | |
| TGATATACTTGGTAAAGGAA+CGG | - | chr1_4:38072148-38072167 | Msa0161960:CDS | 30.0% | |
| CTAACTTCATCTTTCATCTT+AGG | + | chr1_4:38072224-38072243 | None:intergenic | 30.0% | |
| CTAAGATGAAAGATGAAGTT+AGG | - | chr1_4:38072222-38072241 | Msa0161960:CDS | 30.0% | |
| TGTGCTTATCATAATAGTTG+TGG | - | chr1_4:38072284-38072303 | Msa0161960:CDS | 30.0% | |
| ! | TGTTTTCATTCATCAGAGAA+TGG | - | chr1_4:38072437-38072456 | Msa0161960:CDS | 30.0% |
| GGTTTGAGAATGTTGAAAAT+TGG | - | chr1_4:38072491-38072510 | Msa0161960:CDS | 30.0% | |
| AGAATGTTGAAAATTGGAAG+TGG | - | chr1_4:38072497-38072516 | Msa0161960:CDS | 30.0% | |
| GAATGTTGAAAATTGGAAGT+GGG | - | chr1_4:38072498-38072517 | Msa0161960:CDS | 30.0% | |
| AATGTTGAAAATTGGAAGTG+GGG | - | chr1_4:38072499-38072518 | Msa0161960:CDS | 30.0% | |
| TCAAGAAAAAGAGCAAGAAA+AGG | - | chr1_4:38072659-38072678 | Msa0161960:CDS | 30.0% | |
| ! | AAGGAGGATTTTCATTTTCA+AGG | - | chr1_4:38072678-38072697 | Msa0161960:CDS | 30.0% |
| TTGAAAAGCAAAGGTTGAAA+TGG | - | chr1_4:38072861-38072880 | Msa0161960:CDS | 30.0% | |
| TGAAAAGCAAAGGTTGAAAT+GGG | - | chr1_4:38072862-38072881 | Msa0161960:CDS | 30.0% | |
| !! | AGAGAATGGTTTTGCTTATT+AGG | - | chr1_4:38072960-38072979 | Msa0161960:CDS | 30.0% |
| ! | TGTTGTTGTTGTTGTTGATT+AGG | + | chr1_4:38071648-38071667 | None:intergenic | 30.0% |
| CATCATCATTCAATGAAACA+TGG | - | chr1_4:38071747-38071766 | Msa0161960:CDS | 30.0% | |
| TTGTTCTTGGATGAAGAAAA+TGG | + | chr1_4:38071780-38071799 | None:intergenic | 30.0% | |
| CTTTCTTCAGCTTGAAAATT+TGG | + | chr1_4:38071852-38071871 | None:intergenic | 30.0% | |
| ! | CATGGTGAAATCTTTCTTTT+TGG | + | chr1_4:38071888-38071907 | None:intergenic | 30.0% |
| CAAAAAGAAAGATTTCACCA+TGG | - | chr1_4:38071886-38071905 | Msa0161960:CDS | 30.0% | |
| !! | AATGAAATGGACTGATACAA+TGG | - | chr1_4:38071914-38071933 | Msa0161960:CDS | 30.0% |
| AATGGTAAGGCTATTGATAA+TGG | - | chr1_4:38071932-38071951 | Msa0161960:CDS | 30.0% | |
| !!! | CCACTAGTCTTTTTCTTATT+TGG | + | chr1_4:38072002-38072021 | None:intergenic | 30.0% |
| CCAAATAAGAAAAAGACTAG+TGG | - | chr1_4:38071999-38072018 | Msa0161960:CDS | 30.0% | |
| AAAGTGGAAATCTGTTTCAA+GGG | - | chr1_4:38072040-38072059 | Msa0161960:CDS | 30.0% | |
| AACTTATCTTCACATTGTTG+AGG | + | chr1_4:38072095-38072114 | None:intergenic | 30.0% | |
| AAGAGAGTGAATGATATACT+TGG | - | chr1_4:38072137-38072156 | Msa0161960:CDS | 30.0% | |
| GTGAATGATATACTTGGTAA+AGG | - | chr1_4:38072143-38072162 | Msa0161960:CDS | 30.0% | |
| TGATATACTTGGTAAAGGAA+CGG | - | chr1_4:38072148-38072167 | Msa0161960:CDS | 30.0% | |
| CTAACTTCATCTTTCATCTT+AGG | + | chr1_4:38072224-38072243 | None:intergenic | 30.0% | |
| CTAAGATGAAAGATGAAGTT+AGG | - | chr1_4:38072222-38072241 | Msa0161960:CDS | 30.0% | |
| TGTGCTTATCATAATAGTTG+TGG | - | chr1_4:38072284-38072303 | Msa0161960:CDS | 30.0% | |
| ! | TGTTTTCATTCATCAGAGAA+TGG | - | chr1_4:38072437-38072456 | Msa0161960:CDS | 30.0% |
| GGTTTGAGAATGTTGAAAAT+TGG | - | chr1_4:38072491-38072510 | Msa0161960:CDS | 30.0% | |
| AGAATGTTGAAAATTGGAAG+TGG | - | chr1_4:38072497-38072516 | Msa0161960:CDS | 30.0% | |
| GAATGTTGAAAATTGGAAGT+GGG | - | chr1_4:38072498-38072517 | Msa0161960:CDS | 30.0% | |
| AATGTTGAAAATTGGAAGTG+GGG | - | chr1_4:38072499-38072518 | Msa0161960:CDS | 30.0% | |
| TCAAGAAAAAGAGCAAGAAA+AGG | - | chr1_4:38072659-38072678 | Msa0161960:CDS | 30.0% | |
| ! | AAGGAGGATTTTCATTTTCA+AGG | - | chr1_4:38072678-38072697 | Msa0161960:CDS | 30.0% |
| TTGAAAAGCAAAGGTTGAAA+TGG | - | chr1_4:38072861-38072880 | Msa0161960:CDS | 30.0% | |
| TGAAAAGCAAAGGTTGAAAT+GGG | - | chr1_4:38072862-38072881 | Msa0161960:CDS | 30.0% | |
| !! | AGAGAATGGTTTTGCTTATT+AGG | - | chr1_4:38072960-38072979 | Msa0161960:CDS | 30.0% |
| ! | GTTGTTGTTGTTGGTGTAAA+GGG | + | chr1_4:38071596-38071615 | None:intergenic | 35.0% |
| ! | TGTTGTTGTTGTTGGTGTAA+AGG | + | chr1_4:38071597-38071616 | None:intergenic | 35.0% |
| ! | GTTGTTGTTGTTGTTGTTGT+TGG | + | chr1_4:38071605-38071624 | None:intergenic | 35.0% |
| TCTTGGATGAAGAAAATGGA+GGG | + | chr1_4:38071776-38071795 | None:intergenic | 35.0% | |
| TTCTTGGATGAAGAAAATGG+AGG | + | chr1_4:38071777-38071796 | None:intergenic | 35.0% | |
| CTGTTGTTGATGTTTGTTCT+TGG | + | chr1_4:38071793-38071812 | None:intergenic | 35.0% | |
| !! | AATGGACTGATACAATGGTA+AGG | - | chr1_4:38071919-38071938 | Msa0161960:CDS | 35.0% |
| !! | TATTACATTGGTGATGAAGC+TGG | - | chr1_4:38071960-38071979 | Msa0161960:CDS | 35.0% |
| GAAAGTGGAAATCTGTTTCA+AGG | - | chr1_4:38072039-38072058 | Msa0161960:CDS | 35.0% | |
| TGTAGAGTTGTTGAGAATCA+AGG | - | chr1_4:38072173-38072192 | Msa0161960:CDS | 35.0% | |
| TGTTGAGAATCAAGGTTTGT+TGG | - | chr1_4:38072181-38072200 | Msa0161960:CDS | 35.0% | |
| !! | TCAAGGTTTGTTGGATTCAA+TGG | - | chr1_4:38072190-38072209 | Msa0161960:CDS | 35.0% |
| TATCATAATAGTTGTGGCCA+TGG | - | chr1_4:38072290-38072309 | Msa0161960:CDS | 35.0% | |
| ATTCATCAGAGAATGGTGTA+GGG | - | chr1_4:38072444-38072463 | Msa0161960:CDS | 35.0% | |
| ! | GATTTTTCTGATGAGGATGA+AGG | - | chr1_4:38072566-38072585 | Msa0161960:CDS | 35.0% |
| CAAGATGAAGAAGAGAATGA+TGG | - | chr1_4:38072629-38072648 | Msa0161960:CDS | 35.0% | |
| AGAAAAAGAGCAAGAAAAGG+AGG | - | chr1_4:38072662-38072681 | Msa0161960:CDS | 35.0% | |
| GTCATCTTCATCAACACAAT+TGG | - | chr1_4:38072700-38072719 | Msa0161960:CDS | 35.0% | |
| ATAAGTGGTGTGTTTCAAGA+TGG | - | chr1_4:38072743-38072762 | Msa0161960:CDS | 35.0% | |
| !!! | ATCCATTGCTTTTTTTCCCA+AGG | + | chr1_4:38072779-38072798 | None:intergenic | 35.0% |
| GGGAAAAAAAGCAATGGATA+AGG | - | chr1_4:38072780-38072799 | Msa0161960:CDS | 35.0% | |
| AAAAGCAATGGATAAGGAAC+AGG | - | chr1_4:38072786-38072805 | Msa0161960:CDS | 35.0% | |
| CATTTCAGCTTGAAAAGCAA+AGG | - | chr1_4:38072852-38072871 | Msa0161960:CDS | 35.0% | |
| GTATAGTAGCAAGAAAGAGA+GGG | - | chr1_4:38072889-38072908 | Msa0161960:CDS | 35.0% | |
| GAGCTAAACTTGAGAATGAA+AGG | - | chr1_4:38072921-38072940 | Msa0161960:CDS | 35.0% | |
| ! | GGTTTTGCTTATTAGGAAGA+AGG | - | chr1_4:38072967-38072986 | Msa0161960:CDS | 35.0% |
| ! | GTTGTTGTTGTTGGTGTAAA+GGG | + | chr1_4:38071596-38071615 | None:intergenic | 35.0% |
| ! | TGTTGTTGTTGTTGGTGTAA+AGG | + | chr1_4:38071597-38071616 | None:intergenic | 35.0% |
| ! | GTTGTTGTTGTTGTTGTTGT+TGG | + | chr1_4:38071605-38071624 | None:intergenic | 35.0% |
| TCTTGGATGAAGAAAATGGA+GGG | + | chr1_4:38071776-38071795 | None:intergenic | 35.0% | |
| TTCTTGGATGAAGAAAATGG+AGG | + | chr1_4:38071777-38071796 | None:intergenic | 35.0% | |
| CTGTTGTTGATGTTTGTTCT+TGG | + | chr1_4:38071793-38071812 | None:intergenic | 35.0% | |
| !! | AATGGACTGATACAATGGTA+AGG | - | chr1_4:38071919-38071938 | Msa0161960:CDS | 35.0% |
| !! | TATTACATTGGTGATGAAGC+TGG | - | chr1_4:38071960-38071979 | Msa0161960:CDS | 35.0% |
| GAAAGTGGAAATCTGTTTCA+AGG | - | chr1_4:38072039-38072058 | Msa0161960:CDS | 35.0% | |
| TGTAGAGTTGTTGAGAATCA+AGG | - | chr1_4:38072173-38072192 | Msa0161960:CDS | 35.0% | |
| TGTTGAGAATCAAGGTTTGT+TGG | - | chr1_4:38072181-38072200 | Msa0161960:CDS | 35.0% | |
| !! | TCAAGGTTTGTTGGATTCAA+TGG | - | chr1_4:38072190-38072209 | Msa0161960:CDS | 35.0% |
| TATCATAATAGTTGTGGCCA+TGG | - | chr1_4:38072290-38072309 | Msa0161960:CDS | 35.0% | |
| ATTCATCAGAGAATGGTGTA+GGG | - | chr1_4:38072444-38072463 | Msa0161960:CDS | 35.0% | |
| ! | GATTTTTCTGATGAGGATGA+AGG | - | chr1_4:38072566-38072585 | Msa0161960:CDS | 35.0% |
| CAAGATGAAGAAGAGAATGA+TGG | - | chr1_4:38072629-38072648 | Msa0161960:CDS | 35.0% | |
| AGAAAAAGAGCAAGAAAAGG+AGG | - | chr1_4:38072662-38072681 | Msa0161960:CDS | 35.0% | |
| GTCATCTTCATCAACACAAT+TGG | - | chr1_4:38072700-38072719 | Msa0161960:CDS | 35.0% | |
| ATAAGTGGTGTGTTTCAAGA+TGG | - | chr1_4:38072743-38072762 | Msa0161960:CDS | 35.0% | |
| !!! | ATCCATTGCTTTTTTTCCCA+AGG | + | chr1_4:38072779-38072798 | None:intergenic | 35.0% |
| GGGAAAAAAAGCAATGGATA+AGG | - | chr1_4:38072780-38072799 | Msa0161960:CDS | 35.0% | |
| AAAAGCAATGGATAAGGAAC+AGG | - | chr1_4:38072786-38072805 | Msa0161960:CDS | 35.0% | |
| CATTTCAGCTTGAAAAGCAA+AGG | - | chr1_4:38072852-38072871 | Msa0161960:CDS | 35.0% | |
| GTATAGTAGCAAGAAAGAGA+GGG | - | chr1_4:38072889-38072908 | Msa0161960:CDS | 35.0% | |
| GAGCTAAACTTGAGAATGAA+AGG | - | chr1_4:38072921-38072940 | Msa0161960:CDS | 35.0% | |
| ! | GGTTTTGCTTATTAGGAAGA+AGG | - | chr1_4:38072967-38072986 | Msa0161960:CDS | 35.0% |
| TAACAAACCAGAAGGAGTGA+TGG | + | chr1_4:38071556-38071575 | None:intergenic | 40.0% | |
| !! | ATCACTCCTTCTGGTTTGTT+AGG | - | chr1_4:38071555-38071574 | Msa0161960:CDS | 40.0% |
| ACTACTCCTAACAAACCAGA+AGG | + | chr1_4:38071564-38071583 | None:intergenic | 40.0% | |
| CATAGGAAACAACTTGGGAA+TGG | + | chr1_4:38071689-38071708 | None:intergenic | 40.0% | |
| TGTGTCAGTGTCATGATGTT+GGG | + | chr1_4:38071715-38071734 | None:intergenic | 40.0% | |
| TTTCAAGCTGAAGAAAGCTC+TGG | - | chr1_4:38071855-38071874 | Msa0161960:CDS | 40.0% | |
| CACCATGGCAAAGAATGAAA+TGG | - | chr1_4:38071901-38071920 | Msa0161960:CDS | 40.0% | |
| GTCCATTTCATTCTTTGCCA+TGG | + | chr1_4:38071906-38071925 | None:intergenic | 40.0% | |
| !! | TAGTGGGTTGTTACAGAAGA+AGG | - | chr1_4:38072016-38072035 | Msa0161960:CDS | 40.0% |
| !! | AGTGGGTTGTTACAGAAGAA+GGG | - | chr1_4:38072017-38072036 | Msa0161960:CDS | 40.0% |
| TGTTACAGAAGAAGGGAAAG+TGG | - | chr1_4:38072024-38072043 | Msa0161960:CDS | 40.0% | |
| ATCTGTTTCAAGGGCTATGA+TGG | - | chr1_4:38072049-38072068 | Msa0161960:CDS | 40.0% | |
| ! | TCAAGGGCTATGATGGAAAA+AGG | - | chr1_4:38072056-38072075 | Msa0161960:CDS | 40.0% |
| ! | CAAGGGCTATGATGGAAAAA+GGG | - | chr1_4:38072057-38072076 | Msa0161960:CDS | 40.0% |
| AATGTTCAGCACCAAGTAGA+AGG | - | chr1_4:38072329-38072348 | Msa0161960:CDS | 40.0% | |
| CATTCATCAGAGAATGGTGT+AGG | - | chr1_4:38072443-38072462 | Msa0161960:CDS | 40.0% | |
| AGATGAGGATGATGAAGATG+AGG | - | chr1_4:38072529-38072548 | Msa0161960:CDS | 40.0% | |
| ! | GTCAGAGGATTTTTCTGATG+AGG | - | chr1_4:38072559-38072578 | Msa0161960:CDS | 40.0% |
| ATCAGGAGAAGGTTGTTCAA+AGG | - | chr1_4:38072592-38072611 | Msa0161960:CDS | 40.0% | |
| TCAGGAGAAGGTTGTTCAAA+GGG | - | chr1_4:38072593-38072612 | Msa0161960:CDS | 40.0% | |
| GTCCTTGGGAAAAAAAGCAA+TGG | - | chr1_4:38072774-38072793 | Msa0161960:CDS | 40.0% | |
| AAGGAACAGGATAATGCAGT+TGG | - | chr1_4:38072799-38072818 | Msa0161960:CDS | 40.0% | |
| CAGTTGGAGGAACAGAAAAT+AGG | - | chr1_4:38072815-38072834 | Msa0161960:CDS | 40.0% | |
| GGTATAGTAGCAAGAAAGAG+AGG | - | chr1_4:38072888-38072907 | Msa0161960:CDS | 40.0% | |
| TAGCAAGAAAGAGAGGGAAA+TGG | - | chr1_4:38072895-38072914 | Msa0161960:CDS | 40.0% | |
| TAACAAACCAGAAGGAGTGA+TGG | + | chr1_4:38071556-38071575 | None:intergenic | 40.0% | |
| !! | ATCACTCCTTCTGGTTTGTT+AGG | - | chr1_4:38071555-38071574 | Msa0161960:CDS | 40.0% |
| ACTACTCCTAACAAACCAGA+AGG | + | chr1_4:38071564-38071583 | None:intergenic | 40.0% | |
| CATAGGAAACAACTTGGGAA+TGG | + | chr1_4:38071689-38071708 | None:intergenic | 40.0% | |
| TGTGTCAGTGTCATGATGTT+GGG | + | chr1_4:38071715-38071734 | None:intergenic | 40.0% | |
| TTTCAAGCTGAAGAAAGCTC+TGG | - | chr1_4:38071855-38071874 | Msa0161960:CDS | 40.0% | |
| CACCATGGCAAAGAATGAAA+TGG | - | chr1_4:38071901-38071920 | Msa0161960:CDS | 40.0% | |
| GTCCATTTCATTCTTTGCCA+TGG | + | chr1_4:38071906-38071925 | None:intergenic | 40.0% | |
| !! | TAGTGGGTTGTTACAGAAGA+AGG | - | chr1_4:38072016-38072035 | Msa0161960:CDS | 40.0% |
| !! | AGTGGGTTGTTACAGAAGAA+GGG | - | chr1_4:38072017-38072036 | Msa0161960:CDS | 40.0% |
| TGTTACAGAAGAAGGGAAAG+TGG | - | chr1_4:38072024-38072043 | Msa0161960:CDS | 40.0% | |
| ATCTGTTTCAAGGGCTATGA+TGG | - | chr1_4:38072049-38072068 | Msa0161960:CDS | 40.0% | |
| ! | TCAAGGGCTATGATGGAAAA+AGG | - | chr1_4:38072056-38072075 | Msa0161960:CDS | 40.0% |
| ! | CAAGGGCTATGATGGAAAAA+GGG | - | chr1_4:38072057-38072076 | Msa0161960:CDS | 40.0% |
| AATGTTCAGCACCAAGTAGA+AGG | - | chr1_4:38072329-38072348 | Msa0161960:CDS | 40.0% | |
| CATTCATCAGAGAATGGTGT+AGG | - | chr1_4:38072443-38072462 | Msa0161960:CDS | 40.0% | |
| AGATGAGGATGATGAAGATG+AGG | - | chr1_4:38072529-38072548 | Msa0161960:CDS | 40.0% | |
| ! | GTCAGAGGATTTTTCTGATG+AGG | - | chr1_4:38072559-38072578 | Msa0161960:CDS | 40.0% |
| ATCAGGAGAAGGTTGTTCAA+AGG | - | chr1_4:38072592-38072611 | Msa0161960:CDS | 40.0% | |
| TCAGGAGAAGGTTGTTCAAA+GGG | - | chr1_4:38072593-38072612 | Msa0161960:CDS | 40.0% | |
| GTCCTTGGGAAAAAAAGCAA+TGG | - | chr1_4:38072774-38072793 | Msa0161960:CDS | 40.0% | |
| AAGGAACAGGATAATGCAGT+TGG | - | chr1_4:38072799-38072818 | Msa0161960:CDS | 40.0% | |
| CAGTTGGAGGAACAGAAAAT+AGG | - | chr1_4:38072815-38072834 | Msa0161960:CDS | 40.0% | |
| GGTATAGTAGCAAGAAAGAG+AGG | - | chr1_4:38072888-38072907 | Msa0161960:CDS | 40.0% | |
| TAGCAAGAAAGAGAGGGAAA+TGG | - | chr1_4:38072895-38072914 | Msa0161960:CDS | 40.0% | |
| ! | TTTTCCACCATCACTCCTTC+TGG | - | chr1_4:38071546-38071565 | Msa0161960:CDS | 45.0% |
| TGGGAATGGTGCAAATGATG+AGG | + | chr1_4:38071675-38071694 | None:intergenic | 45.0% | |
| ! | GGGAGCATAGGAAACAACTT+GGG | + | chr1_4:38071694-38071713 | None:intergenic | 45.0% |
| GTGTCAGTGTCATGATGTTG+GGG | + | chr1_4:38071714-38071733 | None:intergenic | 45.0% | |
| GTGTGTCAGTGTCATGATGT+TGG | + | chr1_4:38071716-38071735 | None:intergenic | 45.0% | |
| CATAATAGTTGTGGCCATGG+TGG | - | chr1_4:38072293-38072312 | Msa0161960:CDS | 45.0% | |
| !! | TAGAAGTACCAACACCACCA+TGG | + | chr1_4:38072310-38072329 | None:intergenic | 45.0% |
| TTCCACTTCCACCTTCTACT+TGG | + | chr1_4:38072343-38072362 | None:intergenic | 45.0% | |
| ! | TGTTGAGGTTGATTCTGAGG+TGG | + | chr1_4:38072371-38072390 | None:intergenic | 45.0% |
| ! | TGCTGTTGAGGTTGATTCTG+AGG | + | chr1_4:38072374-38072393 | None:intergenic | 45.0% |
| TGTTGTTGATGCTGCTGTTG+AGG | + | chr1_4:38072386-38072405 | None:intergenic | 45.0% | |
| GAGAATGGTGTAGGGAGTTT+AGG | - | chr1_4:38072452-38072471 | Msa0161960:CDS | 45.0% | |
| AATGGTGTAGGGAGTTTAGG+TGG | - | chr1_4:38072455-38072474 | Msa0161960:CDS | 45.0% | |
| TTTAGGTGGTTCAAGAGGAG+AGG | - | chr1_4:38072469-38072488 | Msa0161960:CDS | 45.0% | |
| TTAGGTGGTTCAAGAGGAGA+GGG | - | chr1_4:38072470-38072489 | Msa0161960:CDS | 45.0% | |
| AAGTGGGGATGTTGAAGATG+AGG | - | chr1_4:38072514-38072533 | Msa0161960:CDS | 45.0% | |
| TGAGGATGATGAAGATGAGG+AGG | - | chr1_4:38072532-38072551 | Msa0161960:CDS | 45.0% | |
| GATGAGGATGAAGGTGAATC+AGG | - | chr1_4:38072575-38072594 | Msa0161960:CDS | 45.0% | |
| GATGAAGGTGAATCAGGAGA+AGG | - | chr1_4:38072581-38072600 | Msa0161960:CDS | 45.0% | |
| AGTGGTGTGTTTCAAGATGG+AGG | - | chr1_4:38072746-38072765 | Msa0161960:CDS | 45.0% | |
| GTGGTGTGTTTCAAGATGGA+GGG | - | chr1_4:38072747-38072766 | Msa0161960:CDS | 45.0% | |
| GAACAGGATAATGCAGTTGG+AGG | - | chr1_4:38072802-38072821 | Msa0161960:CDS | 45.0% | |
| AGCAAAGGTTGAAATGGGCA+AGG | - | chr1_4:38072867-38072886 | Msa0161960:CDS | 45.0% | |
| ! | TTTTCCACCATCACTCCTTC+TGG | - | chr1_4:38071546-38071565 | Msa0161960:CDS | 45.0% |
| TGGGAATGGTGCAAATGATG+AGG | + | chr1_4:38071675-38071694 | None:intergenic | 45.0% | |
| ! | GGGAGCATAGGAAACAACTT+GGG | + | chr1_4:38071694-38071713 | None:intergenic | 45.0% |
| GTGTCAGTGTCATGATGTTG+GGG | + | chr1_4:38071714-38071733 | None:intergenic | 45.0% | |
| GTGTGTCAGTGTCATGATGT+TGG | + | chr1_4:38071716-38071735 | None:intergenic | 45.0% | |
| CATAATAGTTGTGGCCATGG+TGG | - | chr1_4:38072293-38072312 | Msa0161960:CDS | 45.0% | |
| !! | TAGAAGTACCAACACCACCA+TGG | + | chr1_4:38072310-38072329 | None:intergenic | 45.0% |
| TTCCACTTCCACCTTCTACT+TGG | + | chr1_4:38072343-38072362 | None:intergenic | 45.0% | |
| ! | TGTTGAGGTTGATTCTGAGG+TGG | + | chr1_4:38072371-38072390 | None:intergenic | 45.0% |
| ! | TGCTGTTGAGGTTGATTCTG+AGG | + | chr1_4:38072374-38072393 | None:intergenic | 45.0% |
| TGTTGTTGATGCTGCTGTTG+AGG | + | chr1_4:38072386-38072405 | None:intergenic | 45.0% | |
| GAGAATGGTGTAGGGAGTTT+AGG | - | chr1_4:38072452-38072471 | Msa0161960:CDS | 45.0% | |
| AATGGTGTAGGGAGTTTAGG+TGG | - | chr1_4:38072455-38072474 | Msa0161960:CDS | 45.0% | |
| TTTAGGTGGTTCAAGAGGAG+AGG | - | chr1_4:38072469-38072488 | Msa0161960:CDS | 45.0% | |
| TTAGGTGGTTCAAGAGGAGA+GGG | - | chr1_4:38072470-38072489 | Msa0161960:CDS | 45.0% | |
| AAGTGGGGATGTTGAAGATG+AGG | - | chr1_4:38072514-38072533 | Msa0161960:CDS | 45.0% | |
| TGAGGATGATGAAGATGAGG+AGG | - | chr1_4:38072532-38072551 | Msa0161960:CDS | 45.0% | |
| GATGAGGATGAAGGTGAATC+AGG | - | chr1_4:38072575-38072594 | Msa0161960:CDS | 45.0% | |
| GATGAAGGTGAATCAGGAGA+AGG | - | chr1_4:38072581-38072600 | Msa0161960:CDS | 45.0% | |
| AGTGGTGTGTTTCAAGATGG+AGG | - | chr1_4:38072746-38072765 | Msa0161960:CDS | 45.0% | |
| GTGGTGTGTTTCAAGATGGA+GGG | - | chr1_4:38072747-38072766 | Msa0161960:CDS | 45.0% | |
| GAACAGGATAATGCAGTTGG+AGG | - | chr1_4:38072802-38072821 | Msa0161960:CDS | 45.0% | |
| AGCAAAGGTTGAAATGGGCA+AGG | - | chr1_4:38072867-38072886 | Msa0161960:CDS | 45.0% | |
| CAAACCAGAAGGAGTGATGG+TGG | + | chr1_4:38071553-38071572 | None:intergenic | 50.0% | |
| ! | GGGGAGCATAGGAAACAACT+TGG | + | chr1_4:38071695-38071714 | None:intergenic | 50.0% |
| ! | GTCATGATGTTGGGGAGCAT+AGG | + | chr1_4:38071706-38071725 | None:intergenic | 50.0% |
| ! | CAAGCTGAAGAAAGCTCTGG+TGG | - | chr1_4:38071858-38071877 | Msa0161960:CDS | 50.0% |
| GTTCAGCACCAAGTAGAAGG+TGG | - | chr1_4:38072332-38072351 | Msa0161960:CDS | 50.0% | |
| CACCAAGTAGAAGGTGGAAG+TGG | - | chr1_4:38072338-38072357 | Msa0161960:CDS | 50.0% | |
| GGGAGTTTAGGTGGTTCAAG+AGG | - | chr1_4:38072464-38072483 | Msa0161960:CDS | 50.0% | |
| AGATGAGGAGGATGAGTCAG+AGG | - | chr1_4:38072544-38072563 | Msa0161960:CDS | 50.0% | |
| AAGATGGAGGGAAGAGTCCT+TGG | - | chr1_4:38072759-38072778 | Msa0161960:CDS | 50.0% | |
| AGATGGAGGGAAGAGTCCTT+GGG | - | chr1_4:38072760-38072779 | Msa0161960:CDS | 50.0% | |
| CAAACCAGAAGGAGTGATGG+TGG | + | chr1_4:38071553-38071572 | None:intergenic | 50.0% | |
| ! | GGGGAGCATAGGAAACAACT+TGG | + | chr1_4:38071695-38071714 | None:intergenic | 50.0% |
| ! | GTCATGATGTTGGGGAGCAT+AGG | + | chr1_4:38071706-38071725 | None:intergenic | 50.0% |
| ! | CAAGCTGAAGAAAGCTCTGG+TGG | - | chr1_4:38071858-38071877 | Msa0161960:CDS | 50.0% |
| GTTCAGCACCAAGTAGAAGG+TGG | - | chr1_4:38072332-38072351 | Msa0161960:CDS | 50.0% | |
| CACCAAGTAGAAGGTGGAAG+TGG | - | chr1_4:38072338-38072357 | Msa0161960:CDS | 50.0% | |
| GGGAGTTTAGGTGGTTCAAG+AGG | - | chr1_4:38072464-38072483 | Msa0161960:CDS | 50.0% | |
| AGATGAGGAGGATGAGTCAG+AGG | - | chr1_4:38072544-38072563 | Msa0161960:CDS | 50.0% | |
| AAGATGGAGGGAAGAGTCCT+TGG | - | chr1_4:38072759-38072778 | Msa0161960:CDS | 50.0% | |
| AGATGGAGGGAAGAGTCCTT+GGG | - | chr1_4:38072760-38072779 | Msa0161960:CDS | 50.0% | |
| ! | AGTTGTGGCCATGGTGGTGT+TGG | - | chr1_4:38072299-38072318 | Msa0161960:CDS | 55.0% |
| ! | AGTTGTGGCCATGGTGGTGT+TGG | - | chr1_4:38072299-38072318 | Msa0161960:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 38071528 | 38073048 | 38071528 | ID=Msa0161960;Name=Msa0161960 |
| chr1_4 | mRNA | 38071528 | 38073048 | 38071528 | ID=Msa0161960-mRNA-1;Parent=Msa0161960;Name=Msa0161960-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|506 |
| chr1_4 | exon | 38071528 | 38073048 | 38071528 | ID=Msa0161960-mRNA-1:exon:11146;Parent=Msa0161960-mRNA-1 |
| chr1_4 | CDS | 38071528 | 38073048 | 38071528 | ID=Msa0161960-mRNA-1:cds;Parent=Msa0161960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
