AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0279260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0279260 MtrunA17_Chr2g0292921 99.775 445 1 0 1 445 1 445 0.0 938
Msa0279260 MtrunA17_Chr4g0051631 97.072 444 13 0 1 444 1 444 0.0 913
Msa0279260 MtrunA17_Chr1g0203181 95.814 430 18 0 1 430 1 430 0.0 849
Msa0279260 MtrunA17_Chr4g0008361 95.581 430 19 0 1 430 1 430 0.0 847
Msa0279260 MtrunA17_Chr4g0008401 95.349 430 20 0 1 430 1 430 0.0 846
Msa0279260 MtrunA17_Chr7g0255791 95.349 430 20 0 1 430 1 430 0.0 845
Msa0279260 MtrunA17_Chr3g0142731 95.139 432 19 1 1 430 1 432 0.0 841
Msa0279260 MtrunA17_Chr4g0007371 94.676 432 21 1 1 430 1 432 0.0 839
Msa0279260 MtrunA17_Chr8g0393021 91.011 445 37 2 1 442 1 445 0.0 828
Msa0279260 MtrunA17_Chr8g0386781 92.093 430 34 0 1 430 1 430 0.0 825
Msa0279260 MtrunA17_Chr8g0378821 41.935 434 242 2 1 424 1 434 2.00e-125 371
Msa0279260 MtrunA17_Chr3g0140821 41.705 434 243 2 1 424 1 434 1.06e-123 367
Msa0279260 MtrunA17_Chr4g0054511 41.475 434 244 2 1 424 1 434 3.82e-123 365
Msa0279260 MtrunA17_Chr1g0206881 41.060 453 244 3 1 443 1 440 2.34e-122 363
Msa0279260 MtrunA17_Chr7g0253411 40.553 434 248 2 1 424 1 434 3.89e-122 363
Msa0279260 MtrunA17_Chr6g0461281 40.315 444 254 2 1 433 1 444 1.18e-120 359
Msa0279260 MtrunA17_Chr2g0300671 37.813 439 262 4 1 431 1 436 6.68e-100 305
Msa0279260 MtrunA17_Chr2g0300491 37.251 451 270 5 1 442 1 447 7.83e-100 306
Msa0279260 MtrunA17_Chr7g0275431 35.388 438 266 7 2 423 3 439 4.09e-97 299
Msa0279260 MtrunA17_Chr3g0109241 31.111 135 85 1 269 395 4 138 1.08e-20 88.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0279260 AT5G23860.2 96.047 430 17 0 1 430 1 430 0.0 851
Msa0279260 AT5G23860.1 96.047 430 17 0 1 430 1 430 0.0 851
Msa0279260 AT2G29550.1 95.824 431 18 0 1 431 1 431 0.0 848
Msa0279260 AT5G44340.1 96.047 430 17 0 1 430 1 430 0.0 848
Msa0279260 AT5G62690.1 95.581 430 19 0 1 430 1 430 0.0 847
Msa0279260 AT1G75780.1 95.128 431 20 1 1 430 1 431 0.0 847
Msa0279260 AT5G62700.1 95.581 430 19 0 1 430 1 430 0.0 847
Msa0279260 AT5G12250.1 95.349 430 20 0 1 430 1 430 0.0 847
Msa0279260 AT1G20010.1 94.896 431 21 1 1 430 1 431 0.0 844
Msa0279260 AT4G20890.1 95.581 430 19 0 1 430 1 430 0.0 842
Msa0279260 AT1G64740.1 41.475 434 244 2 1 424 1 434 5.02e-125 370
Msa0279260 AT5G19780.1 41.475 434 244 2 1 424 1 434 1.75e-124 369
Msa0279260 AT5G19770.1 41.475 434 244 2 1 424 1 434 1.75e-124 369
Msa0279260 AT4G14960.2 41.705 434 243 2 1 424 1 434 1.22e-122 364
Msa0279260 AT1G50010.1 41.475 434 244 2 1 424 1 434 8.67e-122 362
Msa0279260 AT1G04820.1 41.475 434 244 2 1 424 1 434 8.67e-122 362
Msa0279260 AT4G14960.1 41.710 386 215 2 1 376 1 386 4.43e-103 313
Msa0279260 AT5G05620.1 35.160 438 267 7 2 423 3 439 5.58e-96 297
Msa0279260 AT3G61650.1 35.160 438 267 7 2 423 3 439 9.98e-96 296

Find 155 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGAAAATTATGGAAAATTT+AGG 0.108177 2_3:-12910754 None:intergenic
GCAAATTACTTCCCAGAATT+TGG 0.120800 2_3:-12910835 None:intergenic
ACCAAATCGGCGCCAAATTC+TGG 0.170796 2_3:+12910823 Msa0279260:CDS
GTCTTGGATGTTTGTAATAA+TGG 0.193362 2_3:+12913806 Msa0279260:three_prime_UTR
CGTTCCTCGCGCAGTTCTTA+TGG 0.197653 2_3:+12910959 Msa0279260:CDS
CCCTCGGCTCCATTTCTTCA+TGG 0.204912 2_3:+12913068 Msa0279260:CDS
AGTCTGGTGCTGGGAATAAT+TGG 0.228762 2_3:+12911063 Msa0279260:CDS
ATTGAATTTGAAGGAATAAA+TGG 0.238771 2_3:-12910674 None:intergenic
GGATCTTGAACCTGGTACTA+TGG 0.258147 2_3:+12910980 Msa0279260:CDS
ATTAATTGCATCGTCTAAAC+TGG 0.271841 2_3:+12913748 Msa0279260:three_prime_UTR
GGAAAATTATGGAAAATTTA+GGG 0.294511 2_3:-12910753 None:intergenic
CCCAGAATTTGGCGCCGATT+TGG 0.298478 2_3:-12910824 None:intergenic
GGCTCCATTTCTTCATGGTT+GGG 0.301010 2_3:+12913073 Msa0279260:CDS
CGGCTCCATTTCTTCATGGT+TGG 0.309752 2_3:+12913072 Msa0279260:CDS
TAATGGTGGGGAGGATTTAA+AGG 0.315638 2_3:-12910643 None:intergenic
ACGCTGGACTTAACATTATT+CGG 0.327915 2_3:-12913324 None:intergenic
CACATCTGCTGAGTCAATTC+TGG 0.333508 2_3:-12913147 None:intergenic
CTCTTTATGATATTTGCTTC+AGG 0.340074 2_3:+12911919 Msa0279260:CDS
ACAGAAAGCGTCGCATTATA+CGG 0.351592 2_3:-12911846 None:intergenic
ATTTCAAGTGTGTCATTCAT+TGG 0.357158 2_3:+12911698 Msa0279260:CDS
TTGGGAGGTGGCACAGGTTC+AGG 0.362037 2_3:+12911717 Msa0279260:CDS
CAGTTGCATCCTGGTATTGC+TGG 0.365353 2_3:-12913554 None:intergenic
CTTCAATCCAGGAGATGTTC+AGG 0.379033 2_3:+12913403 Msa0279260:CDS
TCCGTTAGATCCGGTCCGTT+TGG 0.380209 2_3:+12911005 Msa0279260:CDS
ATCAATAAGCTCAGCGCCTT+CGG 0.385551 2_3:-12911102 None:intergenic
CAGTCAAAGCACGATATTGC+TGG 0.398688 2_3:-12913122 None:intergenic
CGCATTGTCCGCCTTGGATG+TGG 0.401436 2_3:-12910797 None:intergenic
GCCTTCGGTATAATGACCTT+TGG 0.402288 2_3:-12911087 None:intergenic
TGTTCTTGACATTAAAGTCT+TGG 0.409273 2_3:+12913790 Msa0279260:three_prime_UTR
TTCGAATATATAAATATAGT+TGG 0.414040 2_3:+12913653 Msa0279260:three_prime_UTR
CATTCATTGGGAGGTGGCAC+AGG 0.421362 2_3:+12911711 Msa0279260:CDS
CCAAATCGGCGCCAAATTCT+GGG 0.428149 2_3:+12910824 Msa0279260:CDS
GATACGTTCAAGTTGAAGTT+CGG 0.429716 2_3:-12910901 None:intergenic
GATGCCATCTTAAGGCCCTT+TGG 0.431347 2_3:-12913360 None:intergenic
TTTCAAGTGTGTCATTCATT+GGG 0.439707 2_3:+12911699 Msa0279260:CDS
GGTTCCCGCATTGTCCGCCT+TGG 0.446623 2_3:-12910803 None:intergenic
CAAACCCAACCATGAAGAAA+TGG 0.447291 2_3:-12913077 None:intergenic
TGGCAGAAATGAGGTGGTTA+AGG 0.448615 2_3:-12912960 None:intergenic
AGATCAGAGTTCAGTTGTCC+AGG 0.449289 2_3:-12913015 None:intergenic
GGCGCAAGGCTTTCTTGCAT+TGG 0.449590 2_3:+12913457 Msa0279260:CDS
GTCTGGTGCTGGGAATAATT+GGG 0.450039 2_3:+12911064 Msa0279260:CDS
TGGTGGGGAGGATTTAAAGG+AGG 0.463167 2_3:-12910640 None:intergenic
TAACTCTCCTGAACATCTCC+TGG 0.465563 2_3:-12913410 None:intergenic
TGAAGAAGATTATGAGGAGG+AGG 0.466638 2_3:+12913581 Msa0279260:CDS
AAGAAATGGAGCCGAGGGAA+TGG 0.467627 2_3:-12913063 None:intergenic
TGAAAGTTGATGCCATCTTA+AGG 0.468989 2_3:-12913368 None:intergenic
TTATGAGGAGGAGGAAGAAG+AGG 0.470105 2_3:+12913590 Msa0279260:CDS
TTCGGTGTTTCCTTCACCCA+AGG 0.473114 2_3:+12911803 Msa0279260:CDS
TGGTGAGGGAATGGACGAAA+TGG 0.473534 2_3:+12913485 Msa0279260:CDS
TGCTGATGAAGAAGATTATG+AGG 0.473819 2_3:+12913575 Msa0279260:CDS
CTTCATCAGCAGTTGCATCC+TGG 0.482279 2_3:-12913563 None:intergenic
AGAAATGGAGCCGAGGGAAT+GGG 0.483513 2_3:-12913062 None:intergenic
AATGTATATACACATGGAAA+AGG 0.483853 2_3:-12913891 None:intergenic
CTGGGATCCTCTTGATGTCA+AGG 0.487363 2_3:-12913103 None:intergenic
CACAGCTATGTTTAGGCGCA+AGG 0.489129 2_3:+12913443 Msa0279260:CDS
GGTGGCACAGGTTCAGGCAT+GGG 0.492835 2_3:+12911723 Msa0279260:CDS
GGACAATGCGGGAACCAAAT+CGG 0.495801 2_3:+12910810 Msa0279260:CDS
TGTAAAAGGAGGGAAGGAAC+GGG 0.496181 2_3:-12910713 None:intergenic
GCTTTCTTGCATTGGTACAC+TGG 0.499379 2_3:+12913465 Msa0279260:CDS
TGAGGAGGAGGAAGAAGAGG+AGG 0.500111 2_3:+12913593 Msa0279260:CDS
CTCATTTCTGCCACCATGAG+TGG 0.501025 2_3:+12912970 Msa0279260:CDS
TATACACATGGAAAAGGAAA+AGG 0.501475 2_3:-12913885 None:intergenic
GTGGGGAGGATTTAAAGGAG+GGG 0.505927 2_3:-12910638 None:intergenic
CGGTAATTCAACTTCAATCC+AGG 0.506516 2_3:+12913392 Msa0279260:CDS
ACATCCAAGGCGGACAATGC+GGG 0.508092 2_3:+12910799 Msa0279260:CDS
GTCAAATAACGGCCATGGCG+TGG 0.509186 2_3:-12913201 None:intergenic
GAAGATTCGAGAAGAATATC+CGG 0.509806 2_3:+12911761 Msa0279260:CDS
CAGAATTGACTCAGCAGATG+TGG 0.510255 2_3:+12913148 Msa0279260:CDS
GCCATCTTAAGGCCCTTTGG+AGG 0.510700 2_3:-12913357 None:intergenic
CCCTCCAAAGGGCCTTAAGA+TGG 0.511488 2_3:+12913356 Msa0279260:CDS
TTCACCCAAGGTGTCAGATA+CGG 0.517926 2_3:+12911815 Msa0279260:CDS
AATTTCGTTTGAATGACAAA+TGG 0.519145 2_3:+12913957 Msa0279260:three_prime_UTR
AGGTGGCACAGGTTCAGGCA+TGG 0.521198 2_3:+12911722 Msa0279260:CDS
TGCCCGAAAACAAAATTATC+CGG 0.522234 2_3:-12911041 None:intergenic
CACAACCGTATCTGACACCT+TGG 0.522651 2_3:-12911820 None:intergenic
ATGTAAAAGGAGGGAAGGAA+CGG 0.524028 2_3:-12910714 None:intergenic
ATCCTGGTATTGCTGGTACT+CGG 0.525447 2_3:-12913547 None:intergenic
ACTTGTTGTCTACGTTTCCC+TGG 0.525887 2_3:+12912997 Msa0279260:CDS
TTGCATTGGTACACTGGTGA+GGG 0.526145 2_3:+12913471 Msa0279260:CDS
ACCAAACGGACCGGATCTAA+CGG 0.534715 2_3:-12911006 None:intergenic
GTATATATATATTCAATACA+TGG 0.535588 2_3:-12913932 None:intergenic
ACTCTTCATACTTTGTTGAG+TGG 0.537980 2_3:+12913298 Msa0279260:CDS
TATAGTTGGCTTTGCGCGAG+TGG 0.543351 2_3:+12913667 Msa0279260:three_prime_UTR
GGTGGGGAGGATTTAAAGGA+GGG 0.543741 2_3:-12910639 None:intergenic
AGCAGTTCACAGCTATGTTT+AGG 0.544065 2_3:+12913436 Msa0279260:CDS
TTGCTGACGCAGTCAAATAA+CGG 0.547258 2_3:-12913212 None:intergenic
CTAACGGAATCCATAGTACC+AGG 0.550782 2_3:-12910990 None:intergenic
CTTGCATTGGTACACTGGTG+AGG 0.554328 2_3:+12913470 Msa0279260:CDS
TGCAGATGAATGCATGGTGT+TGG 0.555555 2_3:+12911887 Msa0279260:CDS
TTTGAAGGAATAAATGGAAG+GGG 0.555985 2_3:-12910668 None:intergenic
GAGAATTGTGATTGCTTGCA+AGG 0.556092 2_3:+12911155 Msa0279260:CDS
CAAGTGTGTCATTCATTGGG+AGG 0.556985 2_3:+12911702 Msa0279260:CDS
GAGGAGGAGGAAGAAGAGGA+GGG 0.559856 2_3:+12913594 Msa0279260:CDS
AAGATGGCATCAACTTTCAT+CGG 0.560023 2_3:+12913372 Msa0279260:CDS
GGACGAAAGATCTGACCAAA+CGG 0.560082 2_3:-12911020 None:intergenic
AGGAACGTACCTTCCACCAC+TGG 0.560380 2_3:-12910943 None:intergenic
CACTCATGGTGGCAGAAATG+AGG 0.560878 2_3:-12912969 None:intergenic
ACTATGGATTCCGTTAGATC+CGG 0.561697 2_3:+12910996 Msa0279260:CDS
AAGATCATTCATGTTACTCT+CGG 0.562469 2_3:-12913520 None:intergenic
CCATGAAGAAATGGAGCCGA+GGG 0.563071 2_3:-12913068 None:intergenic
GTTTGGTCAGATCTTTCGTC+CGG 0.564080 2_3:+12911022 Msa0279260:CDS
AACGTCAACATCATACGATC+CGG 0.564605 2_3:-12911780 None:intergenic
TTGGTACACTGGTGAGGGAA+TGG 0.566170 2_3:+12913476 Msa0279260:CDS
TTGTGATGTAAAAGGAGGGA+AGG 0.566392 2_3:-12910719 None:intergenic
TGCCGAGTACCAGCAATACC+AGG 0.566663 2_3:+12913545 Msa0279260:CDS
TGGGATCCTCTTGATGTCAA+GGG 0.572629 2_3:-12913102 None:intergenic
GTTCTTATGGATCTTGAACC+TGG 0.573484 2_3:+12910972 Msa0279260:CDS
TTAATTGCATCGTCTAAACT+GGG 0.573565 2_3:+12913749 Msa0279260:three_prime_UTR
GAAGTAATTTGCGACGAACA+CGG 0.575225 2_3:+12910846 Msa0279260:CDS
GCCAAAGGTCATTATACCGA+AGG 0.575459 2_3:+12911086 Msa0279260:CDS
GCTGGGAATAATTGGGCCAA+AGG 0.582199 2_3:+12911071 Msa0279260:CDS
CCATCTTAAGGCCCTTTGGA+GGG 0.583809 2_3:-12913356 None:intergenic
GTGTGTCATTCATTGGGAGG+TGG 0.584446 2_3:+12911705 Msa0279260:CDS
TCAATCTTATCCCATTCCCT+CGG 0.585031 2_3:+12913052 Msa0279260:CDS
AATTTGAAGGAATAAATGGA+AGG 0.586500 2_3:-12910670 None:intergenic
ACCATGAAGAAATGGAGCCG+AGG 0.587475 2_3:-12913069 None:intergenic
AAAGATCTGACCAAACGGAC+CGG 0.588290 2_3:-12911015 None:intergenic
GTGTGTGATATCCCTCCAAA+GGG 0.589516 2_3:+12913345 Msa0279260:CDS
CGTGTGTGATATCCCTCCAA+AGG 0.592462 2_3:+12913344 Msa0279260:CDS
CACATCCAAGGCGGACAATG+CGG 0.592637 2_3:+12910798 Msa0279260:CDS
TTTGCACCCTTGACATCAAG+AGG 0.593193 2_3:+12913096 Msa0279260:CDS
AGAGAAATCCTCCACATCCA+AGG 0.593831 2_3:+12910786 Msa0279260:CDS
GTATCTGACACCTTGGGTGA+AGG 0.595746 2_3:-12911813 None:intergenic
AGTCAAAGCACGATATTGCT+GGG 0.595864 2_3:-12913121 None:intergenic
ATTTGAAGGAATAAATGGAA+GGG 0.596849 2_3:-12910669 None:intergenic
ACAACCGTATCTGACACCTT+GGG 0.598505 2_3:-12911819 None:intergenic
ACGCAGTCAAATAACGGCCA+TGG 0.600585 2_3:-12913206 None:intergenic
AAAAGGAGGGAAGGAACGGG+TGG 0.602432 2_3:-12910710 None:intergenic
ATTGTCCGCCTTGGATGTGG+AGG 0.602768 2_3:-12910794 None:intergenic
ACAACAAGTAACTCCACTCA+TGG 0.605542 2_3:-12912983 None:intergenic
CAAGGTGTCAGATACGGTTG+TGG 0.608854 2_3:+12911821 Msa0279260:CDS
GATCAGAGTTCAGTTGTCCA+GGG 0.611123 2_3:-12913014 None:intergenic
TAATTGTGGGGTTGTACTCG+AGG 0.611164 2_3:-12910607 None:intergenic
ACAATGAAGCCAGTGGTGGA+AGG 0.613831 2_3:+12910934 Msa0279260:CDS
TTTGTTGTGATGTAAAAGGA+GGG 0.618219 2_3:-12910723 None:intergenic
TTGAAGGAATAAATGGAAGG+GGG 0.623829 2_3:-12910667 None:intergenic
TATTACAATGAAGCCAGTGG+TGG 0.624350 2_3:+12910930 Msa0279260:CDS
CCTTTGTGCTCATCTTACCA+CGG 0.624983 2_3:-12913239 None:intergenic
CATGGAAAAGGAAAAGGCCA+AGG 0.626140 2_3:-12913879 None:intergenic
TGATGAAGAAGATTATGAGG+AGG 0.636972 2_3:+12913578 Msa0279260:CDS
AGAATTGACTCAGCAGATGT+GGG 0.640891 2_3:+12913149 Msa0279260:CDS
TGTGCTGCTGATCCACGCCA+TGG 0.648902 2_3:+12913189 Msa0279260:CDS
AATTGTGGGGTTGTACTCGA+GGG 0.651489 2_3:-12910606 None:intergenic
GTCTATTACAATGAAGCCAG+TGG 0.654009 2_3:+12910927 Msa0279260:CDS
TCATGGTGGCAGAAATGAGG+TGG 0.661184 2_3:-12912966 None:intergenic
ACTGCGTCAGCAATGTTCCG+TGG 0.663759 2_3:+12913222 Msa0279260:CDS
TGAGAATGCAGATGAATGCA+TGG 0.686010 2_3:+12911881 Msa0279260:CDS
ACAAGTAACTCCACTCATGG+TGG 0.692823 2_3:-12912980 None:intergenic
CCGTGGTAAGATGAGCACAA+AGG 0.695473 2_3:+12913239 Msa0279260:CDS
AGATCCATAAGAACTGCGCG+AGG 0.695898 2_3:-12910963 None:intergenic
GATCACACCGGAAAATACAA+CGG 0.700192 2_3:+12910873 Msa0279260:CDS
TGGAGGGATATCACACACGC+TGG 0.710702 2_3:-12913340 None:intergenic
GAAATCCTCCACATCCAAGG+CGG 0.734127 2_3:+12910789 Msa0279260:CDS
GGACGAAATGGAGTTCACTG+AGG 0.756207 2_3:+12913497 Msa0279260:CDS
GAACACGGAATTGATCACAC+CGG 0.763914 2_3:+12910861 Msa0279260:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATGATTATGAATTTTTA+TGG + chr2_3:12911644-12911663 Msa0279260:intron 10.0%
!!! TGTATTAACATTTTTTATAT+AGG + chr2_3:12912408-12912427 Msa0279260:intron 10.0%
!!! ATGAATTACTATTGTTATTT+AGG + chr2_3:12911612-12911631 Msa0279260:intron 15.0%
!!! AATTTTGATGTGATTAATTT+AGG + chr2_3:12911990-12912009 Msa0279260:intron 15.0%
!! TGTTATATGTTATGTAAATA+TGG + chr2_3:12912191-12912210 Msa0279260:intron 15.0%
!! TTCAATTAACAAATGAAATT+TGG + chr2_3:12912718-12912737 Msa0279260:intron 15.0%
!! TTCGAATATATAAATATAGT+TGG + chr2_3:12913653-12913672 Msa0279260:three_prime_UTR 15.0%
!!! ATGTGTATATACATTTTTTT+GGG + chr2_3:12913899-12913918 Msa0279260:three_prime_UTR 15.0%
!! GTATATATATATTCAATACA+TGG - chr2_3:12913935-12913954 None:intergenic 15.0%
!! ATTGAATTTGAAGGAATAAA+TGG - chr2_3:12910677-12910696 None:intergenic 20.0%
!! GGAAAATTATGGAAAATTTA+GGG - chr2_3:12910756-12910775 None:intergenic 20.0%
!!! TTCTATTTGATTTGAATGAA+TGG + chr2_3:12911380-12911399 Msa0279260:intron 20.0%
!! AAATTAAAAAACTTACACGT+TGG - chr2_3:12911963-12911982 None:intergenic 20.0%
!! ATCTAATCTGAATAACATTT+GGG - chr2_3:12912095-12912114 None:intergenic 20.0%
!! AATCTAATCTGAATAACATT+TGG - chr2_3:12912096-12912115 None:intergenic 20.0%
!!! AACATTTTTTATATAGGTAG+TGG + chr2_3:12912414-12912433 Msa0279260:intron 20.0%
!! TAGTAATTGATATGTTAACA+TGG + chr2_3:12912689-12912708 Msa0279260:intron 20.0%
!! ATTAAACACGATTATATTGA+TGG + chr2_3:12912741-12912760 Msa0279260:intron 20.0%
!! TTAAACACGATTATATTGAT+GGG + chr2_3:12912742-12912761 Msa0279260:intron 20.0%
!!! CTTGATTTTATTATTTCAGT+TGG + chr2_3:12912934-12912953 Msa0279260:intron 20.0%
!! CAAAAAAATGTATATACACA+TGG - chr2_3:12913900-12913919 None:intergenic 20.0%
!!! CATGTGTATATACATTTTTT+TGG + chr2_3:12913898-12913917 Msa0279260:three_prime_UTR 20.0%
!!! TGTGTATATACATTTTTTTG+GGG + chr2_3:12913900-12913919 Msa0279260:three_prime_UTR 20.0%
! ATTTGAAGGAATAAATGGAA+GGG - chr2_3:12910672-12910691 None:intergenic 25.0%
! AATTTGAAGGAATAAATGGA+AGG - chr2_3:12910673-12910692 None:intergenic 25.0%
!!! GATGTTTTGATTGAATTTGA+AGG - chr2_3:12910686-12910705 None:intergenic 25.0%
!!! TGATTTTGTTGTGATGTAAA+AGG - chr2_3:12910730-12910749 None:intergenic 25.0%
! GGGAAAATTATGGAAAATTT+AGG - chr2_3:12910757-12910776 None:intergenic 25.0%
!!! CGATGTTGAATATCATTTTT+TGG + chr2_3:12911438-12911457 Msa0279260:intron 25.0%
! AAAAAACTCACAGCATAAAA+CGG - chr2_3:12911521-12911540 None:intergenic 25.0%
! TCATATAGCTAATGTTAACA+AGG + chr2_3:12912509-12912528 Msa0279260:intron 25.0%
!!! ACTTTATTTGCACTTTTAGT+TGG + chr2_3:12912887-12912906 Msa0279260:intron 25.0%
! AATGTATATACACATGGAAA+AGG - chr2_3:12913894-12913913 None:intergenic 25.0%
!!! GTGTATATACATTTTTTTGG+GGG + chr2_3:12913901-12913920 Msa0279260:three_prime_UTR 25.0%
! AATTTCGTTTGAATGACAAA+TGG + chr2_3:12913957-12913976 Msa0279260:three_prime_UTR 25.0%
TTTGAAGGAATAAATGGAAG+GGG - chr2_3:12910671-12910690 None:intergenic 30.0%
! TTTGTTGTGATGTAAAAGGA+GGG - chr2_3:12910726-12910745 None:intergenic 30.0%
!! TTTTGTTGTGATGTAAAAGG+AGG - chr2_3:12910727-12910746 None:intergenic 30.0%
! TCATTTTCTCGGGAAAATTA+TGG - chr2_3:12910767-12910786 None:intergenic 30.0%
!!! TGAATTTGTGTTGTTTTGAG+AGG + chr2_3:12911222-12911241 Msa0279260:intron 30.0%
GAAAATTATGATTGCTTGCA+AGG + chr2_3:12911487-12911506 Msa0279260:intron 30.0%
AACATCGCTAAAAACGAAAA+AGG - chr2_3:12911555-12911574 None:intergenic 30.0%
!!! GTTCTGATTATTTTTGTGTG+TGG + chr2_3:12911671-12911690 Msa0279260:intron 30.0%
! ATTTCAAGTGTGTCATTCAT+TGG + chr2_3:12911698-12911717 Msa0279260:CDS 30.0%
! TTTCAAGTGTGTCATTCATT+GGG + chr2_3:12911699-12911718 Msa0279260:CDS 30.0%
CTCTTTATGATATTTGCTTC+AGG + chr2_3:12911919-12911938 Msa0279260:CDS 30.0%
TTATATGATGTTGTCTGAGT+TGG + chr2_3:12912027-12912046 Msa0279260:intron 30.0%
GACACATTAAGAAAAACTGT+AGG + chr2_3:12912260-12912279 Msa0279260:intron 30.0%
!! TATATAGGTAGTGGAAGATT+AGG + chr2_3:12912423-12912442 Msa0279260:intron 30.0%
TAGCTAATGTTAACAAGGAA+AGG + chr2_3:12912514-12912533 Msa0279260:intron 30.0%
TTGAATTTCTGCCATCAATT+TGG + chr2_3:12912829-12912848 Msa0279260:intron 30.0%
AAGATCATTCATGTTACTCT+CGG - chr2_3:12913523-12913542 None:intergenic 30.0%
ATTAATTGCATCGTCTAAAC+TGG + chr2_3:12913748-12913767 Msa0279260:three_prime_UTR 30.0%
TTAATTGCATCGTCTAAACT+GGG + chr2_3:12913749-12913768 Msa0279260:three_prime_UTR 30.0%
TGTTCTTGACATTAAAGTCT+TGG + chr2_3:12913790-12913809 Msa0279260:three_prime_UTR 30.0%
GTCTTGGATGTTTGTAATAA+TGG + chr2_3:12913806-12913825 Msa0279260:three_prime_UTR 30.0%
!!! CTTGTTTGCTTTTTTAACCT+TGG + chr2_3:12913862-12913881 Msa0279260:three_prime_UTR 30.0%
TATACACATGGAAAAGGAAA+AGG - chr2_3:12913888-12913907 None:intergenic 30.0%
! AGGGGTTTTTGTGTAATTGT+GGG - chr2_3:12910623-12910642 None:intergenic 35.0%
AATAAATGGAAGGGGGTTAA+TGG - chr2_3:12910663-12910682 None:intergenic 35.0%
TTGAAGGAATAAATGGAAGG+GGG - chr2_3:12910670-12910689 None:intergenic 35.0%
! AGGATTTCTCTCATTTTCTC+GGG - chr2_3:12910777-12910796 None:intergenic 35.0%
! GAGGATTTCTCTCATTTTCT+CGG - chr2_3:12910778-12910797 None:intergenic 35.0%
GCAAATTACTTCCCAGAATT+TGG - chr2_3:12910838-12910857 None:intergenic 35.0%
!! GATACGTTCAAGTTGAAGTT+CGG - chr2_3:12910904-12910923 None:intergenic 35.0%
!!! CGTCCGGATAATTTTGTTTT+CGG + chr2_3:12911038-12911057 Msa0279260:CDS 35.0%
!!! GTCCGGATAATTTTGTTTTC+GGG + chr2_3:12911039-12911058 Msa0279260:CDS 35.0%
TGCCCGAAAACAAAATTATC+CGG - chr2_3:12911044-12911063 None:intergenic 35.0%
CAACATCGCTACAAACAAAA+AGG - chr2_3:12911204-12911223 None:intergenic 35.0%
!!! TGATTATTTTTGTGTGTGGC+AGG + chr2_3:12911675-12911694 Msa0279260:intron 35.0%
GAAGATTCGAGAAGAATATC+CGG + chr2_3:12911761-12911780 Msa0279260:CDS 35.0%
! TCGTATGATGTTGACGTTTT+CGG + chr2_3:12911785-12911804 Msa0279260:CDS 35.0%
GTAAAGCTTGTCAATGAACA+TGG + chr2_3:12912282-12912301 Msa0279260:intron 35.0%
TCAATGAACATGGTTCACAA+TGG + chr2_3:12912292-12912311 Msa0279260:intron 35.0%
GGTTCACAATGGAACATTAT+AGG + chr2_3:12912303-12912322 Msa0279260:intron 35.0%
TTAACCTCACTTGTGTTAGA+AGG + chr2_3:12912344-12912363 Msa0279260:intron 35.0%
TCACTTGTGTTAGAAGGATT+CGG + chr2_3:12912350-12912369 Msa0279260:intron 35.0%
AGCAGCAACAAAACAAGAAT+GGG - chr2_3:12912585-12912604 None:intergenic 35.0%
CCACAGATAATCATGATTCA+TGG - chr2_3:12912627-12912646 None:intergenic 35.0%
CCATGAATCATGATTATCTG+TGG + chr2_3:12912624-12912643 Msa0279260:intron 35.0%
AGTTGTGTGCTACAGATAAA+CGG + chr2_3:12912659-12912678 Msa0279260:intron 35.0%
! TCTTTGTTCTTACTGATTGC+TGG + chr2_3:12912794-12912813 Msa0279260:intron 35.0%
TGACAGGATAACCAAATTGA+TGG - chr2_3:12912843-12912862 None:intergenic 35.0%
CTTCATTTAGAGAAAGTGAC+AGG - chr2_3:12912859-12912878 None:intergenic 35.0%
ACTCTTCATACTTTGTTGAG+TGG + chr2_3:12913298-12913317 Msa0279260:CDS 35.0%
ACGCTGGACTTAACATTATT+CGG - chr2_3:12913327-12913346 None:intergenic 35.0%
!! TGAAAGTTGATGCCATCTTA+AGG - chr2_3:12913371-12913390 None:intergenic 35.0%
AAGATGGCATCAACTTTCAT+CGG + chr2_3:12913372-12913391 Msa0279260:CDS 35.0%
TGCTGATGAAGAAGATTATG+AGG + chr2_3:12913575-12913594 Msa0279260:CDS 35.0%
TGATGAAGAAGATTATGAGG+AGG + chr2_3:12913578-12913597 Msa0279260:CDS 35.0%
!!! ACTCGAGGGTATTTTTGGAA+GGG - chr2_3:12910595-12910614 None:intergenic 40.0%
!!! TACTCGAGGGTATTTTTGGA+AGG - chr2_3:12910596-12910615 None:intergenic 40.0%
!!! GTTGTACTCGAGGGTATTTT+TGG - chr2_3:12910600-12910619 None:intergenic 40.0%
! GGGGTTTTTGTGTAATTGTG+GGG - chr2_3:12910622-12910641 None:intergenic 40.0%
! GAGGGGTTTTTGTGTAATTG+TGG - chr2_3:12910624-12910643 None:intergenic 40.0%
! TAATGGTGGGGAGGATTTAA+AGG - chr2_3:12910646-12910665 None:intergenic 40.0%
ATGTAAAAGGAGGGAAGGAA+CGG - chr2_3:12910717-12910736 None:intergenic 40.0%
TTGTGATGTAAAAGGAGGGA+AGG - chr2_3:12910722-12910741 None:intergenic 40.0%
! GAAGTAATTTGCGACGAACA+CGG + chr2_3:12910846-12910865 Msa0279260:CDS 40.0%
GATCACACCGGAAAATACAA+CGG + chr2_3:12910873-12910892 Msa0279260:CDS 40.0%
GTCTATTACAATGAAGCCAG+TGG + chr2_3:12910927-12910946 Msa0279260:CDS 40.0%
TATTACAATGAAGCCAGTGG+TGG + chr2_3:12910930-12910949 Msa0279260:CDS 40.0%
GTTCTTATGGATCTTGAACC+TGG + chr2_3:12910972-12910991 Msa0279260:CDS 40.0%
ACTATGGATTCCGTTAGATC+CGG + chr2_3:12910996-12911015 Msa0279260:CDS 40.0%
!!! AATTTTGTTTTCGGGCAGTC+TGG + chr2_3:12911047-12911066 Msa0279260:CDS 40.0%
GAGAATTGTGATTGCTTGCA+AGG + chr2_3:12911155-12911174 Msa0279260:CDS 40.0%
AACGTCAACATCATACGATC+CGG - chr2_3:12911783-12911802 None:intergenic 40.0%
!! ACAGAAAGCGTCGCATTATA+CGG - chr2_3:12911849-12911868 None:intergenic 40.0%
TGAGAATGCAGATGAATGCA+TGG + chr2_3:12911881-12911900 Msa0279260:CDS 40.0%
!! ATAGTTGATAGACGCAAAGC+TGG + chr2_3:12912122-12912141 Msa0279260:intron 40.0%
!! TAGTTGATAGACGCAAAGCT+GGG + chr2_3:12912123-12912142 Msa0279260:intron 40.0%
AAGCTGGGTAGGATTAAGAA+TGG + chr2_3:12912138-12912157 Msa0279260:intron 40.0%
GAATCCTTCTAACACAAGTG+AGG - chr2_3:12912351-12912370 None:intergenic 40.0%
CAGCAGCAACAAAACAAGAA+TGG - chr2_3:12912586-12912605 None:intergenic 40.0%
GATTATATTGATGGGACCGT+GGG + chr2_3:12912750-12912769 Msa0279260:intron 40.0%
! TTGTTCTTACTGATTGCTGG+TGG + chr2_3:12912797-12912816 Msa0279260:intron 40.0%
ACAACAAGTAACTCCACTCA+TGG - chr2_3:12912986-12913005 None:intergenic 40.0%
TCAATCTTATCCCATTCCCT+CGG + chr2_3:12913052-12913071 Msa0279260:CDS 40.0%
CAAACCCAACCATGAAGAAA+TGG - chr2_3:12913080-12913099 None:intergenic 40.0%
AGTCAAAGCACGATATTGCT+GGG - chr2_3:12913124-12913143 None:intergenic 40.0%
! AGAATTGACTCAGCAGATGT+GGG + chr2_3:12913149-12913168 Msa0279260:CDS 40.0%
TTGCTGACGCAGTCAAATAA+CGG - chr2_3:12913215-12913234 None:intergenic 40.0%
CGGTAATTCAACTTCAATCC+AGG + chr2_3:12913392-12913411 Msa0279260:CDS 40.0%
AGCAGTTCACAGCTATGTTT+AGG + chr2_3:12913436-12913455 Msa0279260:CDS 40.0%
TGAAGAAGATTATGAGGAGG+AGG + chr2_3:12913581-12913600 Msa0279260:CDS 40.0%
AATTGTGGGGTTGTACTCGA+GGG - chr2_3:12910609-12910628 None:intergenic 45.0%
TAATTGTGGGGTTGTACTCG+AGG - chr2_3:12910610-12910629 None:intergenic 45.0%
AATGGAAGGGGGTTAATGGT+GGG - chr2_3:12910659-12910678 None:intergenic 45.0%
AAATGGAAGGGGGTTAATGG+TGG - chr2_3:12910660-12910679 None:intergenic 45.0%
TGTAAAAGGAGGGAAGGAAC+GGG - chr2_3:12910716-12910735 None:intergenic 45.0%
AGAGAAATCCTCCACATCCA+AGG + chr2_3:12910786-12910805 Msa0279260:CDS 45.0%
GAACACGGAATTGATCACAC+CGG + chr2_3:12910861-12910880 Msa0279260:CDS 45.0%
! GGAATCGCCGTTGTATTTTC+CGG - chr2_3:12910883-12910902 None:intergenic 45.0%
GGATCTTGAACCTGGTACTA+TGG + chr2_3:12910980-12910999 Msa0279260:CDS 45.0%
CTAACGGAATCCATAGTACC+AGG - chr2_3:12910993-12911012 None:intergenic 45.0%
AAAGATCTGACCAAACGGAC+CGG - chr2_3:12911018-12911037 None:intergenic 45.0%
GGACGAAAGATCTGACCAAA+CGG - chr2_3:12911023-12911042 None:intergenic 45.0%
GTTTGGTCAGATCTTTCGTC+CGG + chr2_3:12911022-12911041 Msa0279260:CDS 45.0%
! AGTCTGGTGCTGGGAATAAT+TGG + chr2_3:12911063-12911082 Msa0279260:CDS 45.0%
! GTCTGGTGCTGGGAATAATT+GGG + chr2_3:12911064-12911083 Msa0279260:CDS 45.0%
GCCAAAGGTCATTATACCGA+AGG + chr2_3:12911086-12911105 Msa0279260:CDS 45.0%
GCCTTCGGTATAATGACCTT+TGG - chr2_3:12911090-12911109 None:intergenic 45.0%
ATCAATAAGCTCAGCGCCTT+CGG - chr2_3:12911105-12911124 None:intergenic 45.0%
! CAAGTGTGTCATTCATTGGG+AGG + chr2_3:12911702-12911721 Msa0279260:CDS 45.0%
! TTCACCCAAGGTGTCAGATA+CGG + chr2_3:12911815-12911834 Msa0279260:CDS 45.0%
ACAACCGTATCTGACACCTT+GGG - chr2_3:12911822-12911841 None:intergenic 45.0%
TGCAGATGAATGCATGGTGT+TGG + chr2_3:12911887-12911906 Msa0279260:CDS 45.0%
! CAGTACAACCTTGCTCTAGA+TGG + chr2_3:12912216-12912235 Msa0279260:intron 45.0%
! TACAACCTTGCTCTAGATGG+AGG + chr2_3:12912219-12912238 Msa0279260:intron 45.0%
! ATCTACCTCCATCTAGAGCA+AGG - chr2_3:12912227-12912246 None:intergenic 45.0%
CGATTATATTGATGGGACCG+TGG + chr2_3:12912749-12912768 Msa0279260:intron 45.0%
TGGCAGAAATGAGGTGGTTA+AGG - chr2_3:12912963-12912982 None:intergenic 45.0%
ACAAGTAACTCCACTCATGG+TGG - chr2_3:12912983-12913002 None:intergenic 45.0%
!! ACTTGTTGTCTACGTTTCCC+TGG + chr2_3:12912997-12913016 Msa0279260:CDS 45.0%
GATCAGAGTTCAGTTGTCCA+GGG - chr2_3:12913017-12913036 None:intergenic 45.0%
AGATCAGAGTTCAGTTGTCC+AGG - chr2_3:12913018-12913037 None:intergenic 45.0%
GGCTCCATTTCTTCATGGTT+GGG + chr2_3:12913073-12913092 Msa0279260:CDS 45.0%
TTTGCACCCTTGACATCAAG+AGG + chr2_3:12913096-12913115 Msa0279260:CDS 45.0%
TGGGATCCTCTTGATGTCAA+GGG - chr2_3:12913105-12913124 None:intergenic 45.0%
CAGTCAAAGCACGATATTGC+TGG - chr2_3:12913125-12913144 None:intergenic 45.0%
CACATCTGCTGAGTCAATTC+TGG - chr2_3:12913150-12913169 None:intergenic 45.0%
! CAGAATTGACTCAGCAGATG+TGG + chr2_3:12913148-12913167 Msa0279260:CDS 45.0%
CCTTTGTGCTCATCTTACCA+CGG - chr2_3:12913242-12913261 None:intergenic 45.0%
GTGTGTGATATCCCTCCAAA+GGG + chr2_3:12913345-12913364 Msa0279260:CDS 45.0%
CTTCAATCCAGGAGATGTTC+AGG + chr2_3:12913403-12913422 Msa0279260:CDS 45.0%
TAACTCTCCTGAACATCTCC+TGG - chr2_3:12913413-12913432 None:intergenic 45.0%
! GCTTTCTTGCATTGGTACAC+TGG + chr2_3:12913465-12913484 Msa0279260:CDS 45.0%
! TTGCATTGGTACACTGGTGA+GGG + chr2_3:12913471-12913490 Msa0279260:CDS 45.0%
ATCCTGGTATTGCTGGTACT+CGG - chr2_3:12913550-12913569 None:intergenic 45.0%
TTATGAGGAGGAGGAAGAAG+AGG + chr2_3:12913590-12913609 Msa0279260:CDS 45.0%
CATGGAAAAGGAAAAGGCCA+AGG - chr2_3:12913882-12913901 None:intergenic 45.0%
GTGGGGAGGATTTAAAGGAG+GGG - chr2_3:12910641-12910660 None:intergenic 50.0%
GGTGGGGAGGATTTAAAGGA+GGG - chr2_3:12910642-12910661 None:intergenic 50.0%
TGGTGGGGAGGATTTAAAGG+AGG - chr2_3:12910643-12910662 None:intergenic 50.0%
ATGGAAGGGGGTTAATGGTG+GGG - chr2_3:12910658-12910677 None:intergenic 50.0%
GAAATCCTCCACATCCAAGG+CGG + chr2_3:12910789-12910808 Msa0279260:CDS 50.0%
GGACAATGCGGGAACCAAAT+CGG + chr2_3:12910810-12910829 Msa0279260:CDS 50.0%
ACCAAATCGGCGCCAAATTC+TGG + chr2_3:12910823-12910842 Msa0279260:CDS 50.0%
CCAAATCGGCGCCAAATTCT+GGG + chr2_3:12910824-12910843 Msa0279260:CDS 50.0%
! ACAATGAAGCCAGTGGTGGA+AGG + chr2_3:12910934-12910953 Msa0279260:CDS 50.0%
AGATCCATAAGAACTGCGCG+AGG - chr2_3:12910966-12910985 None:intergenic 50.0%
ACCAAACGGACCGGATCTAA+CGG - chr2_3:12911009-12911028 None:intergenic 50.0%
GCTGGGAATAATTGGGCCAA+AGG + chr2_3:12911071-12911090 Msa0279260:CDS 50.0%
! GTGTGTCATTCATTGGGAGG+TGG + chr2_3:12911705-12911724 Msa0279260:CDS 50.0%
!! TTCGGTGTTTCCTTCACCCA+AGG + chr2_3:12911803-12911822 Msa0279260:CDS 50.0%
GTATCTGACACCTTGGGTGA+AGG - chr2_3:12911816-12911835 None:intergenic 50.0%
CACAACCGTATCTGACACCT+TGG - chr2_3:12911823-12911842 None:intergenic 50.0%
! CAAGGTGTCAGATACGGTTG+TGG + chr2_3:12911821-12911840 Msa0279260:CDS 50.0%
TGATAGACGCAAAGCTGGGT+AGG + chr2_3:12912127-12912146 Msa0279260:intron 50.0%
TATATTGATGGGACCGTGGG+AGG + chr2_3:12912753-12912772 Msa0279260:intron 50.0%
ATATTGATGGGACCGTGGGA+GGG + chr2_3:12912754-12912773 Msa0279260:intron 50.0%
! GGAGGGTTCAAGTGGGTTTA+GGG + chr2_3:12912771-12912790 Msa0279260:intron 50.0%
TCATGGTGGCAGAAATGAGG+TGG - chr2_3:12912969-12912988 None:intergenic 50.0%
CACTCATGGTGGCAGAAATG+AGG - chr2_3:12912972-12912991 None:intergenic 50.0%
CTCATTTCTGCCACCATGAG+TGG + chr2_3:12912970-12912989 Msa0279260:CDS 50.0%
AGAAATGGAGCCGAGGGAAT+GGG - chr2_3:12913065-12913084 None:intergenic 50.0%
AAGAAATGGAGCCGAGGGAA+TGG - chr2_3:12913066-12913085 None:intergenic 50.0%
CCATGAAGAAATGGAGCCGA+GGG - chr2_3:12913071-12913090 None:intergenic 50.0%
ACCATGAAGAAATGGAGCCG+AGG - chr2_3:12913072-12913091 None:intergenic 50.0%
CGGCTCCATTTCTTCATGGT+TGG + chr2_3:12913072-12913091 Msa0279260:CDS 50.0%
CTGGGATCCTCTTGATGTCA+AGG - chr2_3:12913106-12913125 None:intergenic 50.0%
ACGCAGTCAAATAACGGCCA+TGG - chr2_3:12913209-12913228 None:intergenic 50.0%
CCGTGGTAAGATGAGCACAA+AGG + chr2_3:12913239-12913258 Msa0279260:CDS 50.0%
CGTGTGTGATATCCCTCCAA+AGG + chr2_3:12913344-12913363 Msa0279260:CDS 50.0%
CCATCTTAAGGCCCTTTGGA+GGG - chr2_3:12913359-12913378 None:intergenic 50.0%
GATGCCATCTTAAGGCCCTT+TGG - chr2_3:12913363-12913382 None:intergenic 50.0%
CACAGCTATGTTTAGGCGCA+AGG + chr2_3:12913443-12913462 Msa0279260:CDS 50.0%
! CTTGCATTGGTACACTGGTG+AGG + chr2_3:12913470-12913489 Msa0279260:CDS 50.0%
TTGGTACACTGGTGAGGGAA+TGG + chr2_3:12913476-12913495 Msa0279260:CDS 50.0%
TGGTGAGGGAATGGACGAAA+TGG + chr2_3:12913485-12913504 Msa0279260:CDS 50.0%
GGACGAAATGGAGTTCACTG+AGG + chr2_3:12913497-12913516 Msa0279260:CDS 50.0%
CAGTTGCATCCTGGTATTGC+TGG - chr2_3:12913557-12913576 None:intergenic 50.0%
CTTCATCAGCAGTTGCATCC+TGG - chr2_3:12913566-12913585 None:intergenic 50.0%
!! TATAGTTGGCTTTGCGCGAG+TGG + chr2_3:12913667-12913686 Msa0279260:three_prime_UTR 50.0%
AAAAGGAGGGAAGGAACGGG+TGG - chr2_3:12910713-12910732 None:intergenic 55.0%
ATTGTCCGCCTTGGATGTGG+AGG - chr2_3:12910797-12910816 None:intergenic 55.0%
CACATCCAAGGCGGACAATG+CGG + chr2_3:12910798-12910817 Msa0279260:CDS 55.0%
ACATCCAAGGCGGACAATGC+GGG + chr2_3:12910799-12910818 Msa0279260:CDS 55.0%
!! CCCAGAATTTGGCGCCGATT+TGG - chr2_3:12910827-12910846 None:intergenic 55.0%
AGGAACGTACCTTCCACCAC+TGG - chr2_3:12910946-12910965 None:intergenic 55.0%
CGTTCCTCGCGCAGTTCTTA+TGG + chr2_3:12910959-12910978 Msa0279260:CDS 55.0%
TCCGTTAGATCCGGTCCGTT+TGG + chr2_3:12911005-12911024 Msa0279260:CDS 55.0%
!! TTTTCGGGCAGTCTGGTGCT+GGG + chr2_3:12911054-12911073 Msa0279260:CDS 55.0%
CATTCATTGGGAGGTGGCAC+AGG + chr2_3:12911711-12911730 Msa0279260:CDS 55.0%
AACCCACTTGAACCCTCCCA+CGG - chr2_3:12912769-12912788 None:intergenic 55.0%
! GGGAGGGTTCAAGTGGGTTT+AGG + chr2_3:12912770-12912789 Msa0279260:intron 55.0%
CCCTCGGCTCCATTTCTTCA+TGG + chr2_3:12913068-12913087 Msa0279260:CDS 55.0%
GTCAAATAACGGCCATGGCG+TGG - chr2_3:12913204-12913223 None:intergenic 55.0%
ACTGCGTCAGCAATGTTCCG+TGG + chr2_3:12913222-12913241 Msa0279260:CDS 55.0%
TGGAGGGATATCACACACGC+TGG - chr2_3:12913343-12913362 None:intergenic 55.0%
CCCTCCAAAGGGCCTTAAGA+TGG + chr2_3:12913356-12913375 Msa0279260:CDS 55.0%
GCCATCTTAAGGCCCTTTGG+AGG - chr2_3:12913360-12913379 None:intergenic 55.0%
GGCGCAAGGCTTTCTTGCAT+TGG + chr2_3:12913457-12913476 Msa0279260:CDS 55.0%
TGCCGAGTACCAGCAATACC+AGG + chr2_3:12913545-12913564 Msa0279260:CDS 55.0%
TGAGGAGGAGGAAGAAGAGG+AGG + chr2_3:12913593-12913612 Msa0279260:CDS 55.0%
GAGGAGGAGGAAGAAGAGGA+GGG + chr2_3:12913594-12913613 Msa0279260:CDS 55.0%
! GAAGGGGGTTAATGGTGGGG+AGG - chr2_3:12910655-12910674 None:intergenic 60.0%
CGCATTGTCCGCCTTGGATG+TGG - chr2_3:12910800-12910819 None:intergenic 60.0%
!! GTTTTCGGGCAGTCTGGTGC+TGG + chr2_3:12911053-12911072 Msa0279260:CDS 60.0%
TTGGGAGGTGGCACAGGTTC+AGG + chr2_3:12911717-12911736 Msa0279260:CDS 60.0%
AGGTGGCACAGGTTCAGGCA+TGG + chr2_3:12911722-12911741 Msa0279260:CDS 60.0%
GGTGGCACAGGTTCAGGCAT+GGG + chr2_3:12911723-12911742 Msa0279260:CDS 60.0%
GACCGTGGGAGGGTTCAAGT+GGG + chr2_3:12912764-12912783 Msa0279260:intron 60.0%
! TGTGCTGCTGATCCACGCCA+TGG + chr2_3:12913189-12913208 Msa0279260:CDS 60.0%
GGTTCCCGCATTGTCCGCCT+TGG - chr2_3:12910806-12910825 None:intergenic 65.0%
GGACCGTGGGAGGGTTCAAG+TGG + chr2_3:12912763-12912782 Msa0279260:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 12910585 12913988 12910585 ID=Msa0279260;Name=Msa0279260
chr2_3 mRNA 12910585 12913988 12910585 ID=Msa0279260-mRNA-1;Parent=Msa0279260;Name=Msa0279260-mRNA-1;_AED=0.01;_eAED=0.01;_QI=198|1|1|1|1|1|3|362|445
chr2_3 exon 12910585 12911176 12910585 ID=Msa0279260-mRNA-1:exon:5632;Parent=Msa0279260-mRNA-1
chr2_3 exon 12911697 12911966 12911697 ID=Msa0279260-mRNA-1:exon:5633;Parent=Msa0279260-mRNA-1
chr2_3 exon 12912953 12913988 12912953 ID=Msa0279260-mRNA-1:exon:5634;Parent=Msa0279260-mRNA-1
chr2_3 five_prime_UTR 12910585 12910782 12910585 ID=Msa0279260-mRNA-1:five_prime_utr;Parent=Msa0279260-mRNA-1
chr2_3 CDS 12910783 12911176 12910783 ID=Msa0279260-mRNA-1:cds;Parent=Msa0279260-mRNA-1
chr2_3 CDS 12911697 12911966 12911697 ID=Msa0279260-mRNA-1:cds;Parent=Msa0279260-mRNA-1
chr2_3 CDS 12912953 12913626 12912953 ID=Msa0279260-mRNA-1:cds;Parent=Msa0279260-mRNA-1
chr2_3 three_prime_UTR 12913627 12913988 12913627 ID=Msa0279260-mRNA-1:three_prime_utr;Parent=Msa0279260-mRNA-1
Gene Sequence

>Msa0279260

ATGAGAGAAATCCTCCACATCCAAGGCGGACAATGCGGGAACCAAATCGGCGCCAAATTCTGGGAAGTAATTTGCGACGAACACGGAATTGATCACACCGGAAAATACAACGGCGATTCCGAACTTCAACTTGAACGTATCAATGTCTATTACAATGAAGCCAGTGGTGGAAGGTACGTTCCTCGCGCAGTTCTTATGGATCTTGAACCTGGTACTATGGATTCCGTTAGATCCGGTCCGTTTGGTCAGATCTTTCGTCCGGATAATTTTGTTTTCGGGCAGTCTGGTGCTGGGAATAATTGGGCCAAAGGTCATTATACCGAAGGCGCTGAGCTTATTGATTCTGTTCTTGATGTTGTTCGTAAAGAAGCTGAGAATTGTGATTGCTTGCAAGGATTTCAAGTGTGTCATTCATTGGGAGGTGGCACAGGTTCAGGCATGGGAACGCTTTTGATATCGAAGATTCGAGAAGAATATCCGGATCGTATGATGTTGACGTTTTCGGTGTTTCCTTCACCCAAGGTGTCAGATACGGTTGTGGAACCGTATAATGCGACGCTTTCTGTTCATCAACTTGTTGAGAATGCAGATGAATGCATGGTGTTGGATAATGAAGCTCTTTATGATATTTGCTTCAGGACTTTGAAGCTTGCTACGCCAACGTTTGGTGACCTTAACCACCTCATTTCTGCCACCATGAGTGGAGTTACTTGTTGTCTACGTTTCCCTGGACAACTGAACTCTGATCTTCGTAAGCTTGCTGTCAATCTTATCCCATTCCCTCGGCTCCATTTCTTCATGGTTGGGTTTGCACCCTTGACATCAAGAGGATCCCAGCAATATCGTGCTTTGACTGTACCAGAATTGACTCAGCAGATGTGGGATGCGAAGAACATGATGTGTGCTGCTGATCCACGCCATGGCCGTTATTTGACTGCGTCAGCAATGTTCCGTGGTAAGATGAGCACAAAGGAAGTAGATGAGCAGATGATCAATGTGCAAAACAAGAACTCTTCATACTTTGTTGAGTGGATACCGAATAATGTTAAGTCCAGCGTGTGTGATATCCCTCCAAAGGGCCTTAAGATGGCATCAACTTTCATCGGTAATTCAACTTCAATCCAGGAGATGTTCAGGAGAGTTAGTGAGCAGTTCACAGCTATGTTTAGGCGCAAGGCTTTCTTGCATTGGTACACTGGTGAGGGAATGGACGAAATGGAGTTCACTGAGGCCGAGAGTAACATGAATGATCTTGTTGCCGAGTACCAGCAATACCAGGATGCAACTGCTGATGAAGAAGATTATGAGGAGGAGGAAGAAGAGGAGGGTGCTGCTTAA
Protein sequence

>Msa0279260

MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYNGDSELQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEDYEEEEEEEGAA*