AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0546680


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0546680 MtrunA17_Chr4g0028461 93.893 262 12 2 92 353 67 324 3.11e-154 436
Msa0546680 MtrunA17_Chr2g0327311 45.968 248 105 4 13 253 7 232 3.87e-41 147
Msa0546680 MtrunA17_Chr1g0180631 39.157 332 144 6 73 353 9 333 8.41e-39 140
Msa0546680 MtrunA17_Chr7g0264601 46.774 186 80 3 92 258 14 199 9.01e-38 138
Msa0546680 MtrunA17_Chr3g0094841 29.740 269 134 6 87 353 22 237 4.81e-28 109
Msa0546680 MtrunA17_Chr8g0386231 31.615 291 147 9 93 353 53 321 1.10e-25 105
Msa0546680 MtrunA17_Chr2g0290471 34.733 262 142 5 93 353 36 269 1.54e-21 92.8
Msa0546680 MtrunA17_Chr3g0132051 34.194 155 99 2 93 246 36 188 2.59e-20 89.4
Msa0546680 MtrunA17_Chr8g0337951 29.368 269 144 6 92 350 30 262 5.99e-20 88.2
Msa0546680 MtrunA17_Chr3g0132061 34.839 155 99 2 93 246 36 189 6.32e-20 89.0
Msa0546680 MtrunA17_Chr3g0128091 29.259 270 161 6 91 352 36 283 4.44e-19 86.3
Msa0546680 MtrunA17_Chr5g0429111 28.125 160 106 2 94 253 56 206 1.77e-15 76.3
Msa0546680 MtrunA17_Chr4g0001151 36.667 120 74 2 93 211 170 288 1.22e-14 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0546680 AT5G60800.1 50.000 272 109 4 93 353 28 283 1.84e-55 183
Msa0546680 AT5G60800.2 49.632 272 110 4 93 353 28 283 1.96e-54 181
Msa0546680 AT5G03380.1 38.889 234 99 5 58 258 2 224 1.82e-37 139
Msa0546680 AT5G03380.2 40.609 197 84 3 95 258 1 197 1.19e-35 133
Msa0546680 AT3G02960.1 31.313 297 142 8 63 353 6 246 2.01e-32 122
Msa0546680 AT2G36950.1 35.119 336 140 10 94 353 53 386 1.10e-31 123
Msa0546680 AT2G28090.1 44.022 184 86 5 79 253 12 187 2.73e-31 119
Msa0546680 AT5G50740.5 31.834 289 135 9 93 353 29 283 2.00e-27 109
Msa0546680 AT5G50740.1 31.834 289 135 9 93 353 29 283 2.00e-27 109
Msa0546680 AT5G50740.3 31.834 289 135 9 93 353 36 290 4.49e-27 108
Msa0546680 AT5G24580.4 29.480 173 113 3 94 265 59 223 7.97e-19 86.3
Msa0546680 AT5G24580.1 29.480 173 113 3 94 265 59 223 7.97e-19 86.3
Msa0546680 AT5G24580.2 29.480 173 113 3 94 265 58 222 8.26e-19 86.3
Msa0546680 AT5G63530.1 37.107 159 89 4 93 245 75 228 1.13e-18 86.3
Msa0546680 AT5G63530.2 37.107 159 89 4 93 245 60 213 1.17e-18 86.3
Msa0546680 AT5G50740.2 39.695 131 61 3 93 214 29 150 1.29e-18 82.4
Msa0546680 AT5G50740.4 39.695 131 61 3 93 214 36 157 3.75e-18 81.3
Msa0546680 AT1G29000.1 32.298 161 108 1 94 253 18 178 2.02e-16 79.0
Msa0546680 AT1G29000.2 32.298 161 108 1 94 253 18 178 2.02e-16 79.0
Msa0546680 AT5G24580.3 28.902 173 111 4 94 265 59 220 1.34e-15 77.0
Msa0546680 AT3G05220.1 54.237 59 27 0 89 147 8 66 8.66e-12 66.6
Msa0546680 AT5G19090.2 47.619 84 42 2 89 172 8 89 2.55e-11 65.1
Msa0546680 AT5G19090.3 47.619 84 42 2 89 172 8 89 2.55e-11 65.1
Msa0546680 AT5G24580.5 28.261 138 90 3 129 265 7 136 2.60e-11 63.2
Msa0546680 AT5G19090.5 47.619 84 42 2 89 172 8 89 3.22e-11 65.1
Msa0546680 AT5G19090.4 47.619 84 42 2 89 172 8 89 3.22e-11 65.1
Msa0546680 AT5G19090.1 47.619 84 42 2 89 172 8 89 3.22e-11 65.1
Msa0546680 AT3G06130.1 54.237 59 27 0 89 147 8 66 3.77e-11 64.7
Msa0546680 AT3G06130.2 54.237 59 27 0 89 147 8 66 4.15e-11 63.9

Find 83 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTGTTGTTATCCTTCT+TGG 0.114690 4_1:-38869338 None:intergenic
CCACCTTCCTTGTCTTTCTT+TGG 0.170033 4_1:-38869840 None:intergenic
CTAAAACAAATTCTTAAAAT+TGG 0.209868 4_1:-38870399 None:intergenic
CAACCCTTTGGTCTTGGTTA+TGG 0.253838 4_1:+38869993 Msa0546680:CDS
ATTCCATGAGACAGGGAAAA+AGG 0.302499 4_1:+38870239 Msa0546680:three_prime_UTR
GAGTAATGTGAATGATGATA+TGG 0.302818 4_1:+38870452 Msa0546680:three_prime_UTR
AGAAGAAGAAAAGTGTGATT+TGG 0.337019 4_1:-38868574 None:intergenic
AGAAAAGTGTGATTTGGAAT+TGG 0.346947 4_1:-38868568 None:intergenic
TTCTTGTTGTTATCCTTCTT+GGG 0.350090 4_1:-38869337 None:intergenic
GATGGAAATGAAGGAGGAGG+TGG 0.350616 4_1:+38869882 Msa0546680:CDS
TTAATACATTAGACATCATA+TGG 0.350817 4_1:+38870371 Msa0546680:three_prime_UTR
GGAAATGAAGGAGGAGGTGG+GGG 0.362659 4_1:+38869885 Msa0546680:CDS
AGTTAAGATAATGGAGTATA+TGG 0.364486 4_1:+38869965 Msa0546680:CDS
GTGTGATTTGGAATTGGAAT+TGG 0.365278 4_1:-38868562 None:intergenic
TGGAAATGAAGGAGGAGGTG+GGG 0.385436 4_1:+38869884 Msa0546680:CDS
CAAGGATGTATTGATAAGAT+TGG 0.393223 4_1:+38869561 Msa0546680:CDS
AGGAGGAGAAGTTAAGATAA+TGG 0.394798 4_1:+38869956 Msa0546680:CDS
TTTGATGCTGTTAAGGTGTT+TGG 0.396644 4_1:-38869034 None:intergenic
ATCACAGAAGCTTAAGAGAA+AGG 0.414583 4_1:+38869803 Msa0546680:CDS
GTTCAACAACCCTTTGGTCT+TGG 0.420631 4_1:+38869987 Msa0546680:CDS
AAGGAAGGTGGTGGTGGTGG+TGG 0.421210 4_1:+38869852 Msa0546680:CDS
TGAAACCTTTGATGCTGTTA+AGG 0.424806 4_1:-38869041 None:intergenic
GACAAGGAAGGTGGTGGTGG+TGG 0.426526 4_1:+38869849 Msa0546680:CDS
TATGAATATTTAACATCTCT+TGG 0.428843 4_1:-38870055 None:intergenic
CAACAATGGAGGAGAGAAGA+AGG 0.441440 4_1:+38868870 Msa0546680:CDS
ATGGAAATGAAGGAGGAGGT+GGG 0.453141 4_1:+38869883 Msa0546680:CDS
AAGGATGTATTGATAAGATT+GGG 0.459716 4_1:+38869562 Msa0546680:CDS
TTGTTATCCTTCTTGGGAAG+TGG 0.460354 4_1:-38869331 None:intergenic
TTTCATTCAATTCAACATGA+TGG 0.461773 4_1:+38870168 Msa0546680:three_prime_UTR
GGTGGTGGTGGTGAGAAGGA+TGG 0.477883 4_1:+38869864 Msa0546680:CDS
TTCTCATCACTAAACATTTG+TGG 0.482907 4_1:-38870092 None:intergenic
GTGAAAGCAGAGAGTGAAAC+CGG 0.485601 4_1:+38869220 Msa0546680:CDS
GAAAACAACAACAACAATGA+AGG 0.493534 4_1:+38868805 Msa0546680:CDS
TATATGGTTCAACAACCCTT+TGG 0.493580 4_1:+38869981 Msa0546680:CDS
CAACAATGGAGGAGATAAGA+AGG 0.494392 4_1:+38868933 Msa0546680:CDS
GGGGTCCACATTTCCGGTGA+CGG 0.497438 4_1:-38869251 None:intergenic
GAAGCTTAAGAGAAAGGTTG+AGG 0.498997 4_1:+38869809 Msa0546680:CDS
CCATTGTTGAAAGGTGTTGA+AGG 0.501520 4_1:-38868598 None:intergenic
CATTTCACCACTTCCCAAGA+AGG 0.504323 4_1:+38869324 Msa0546680:CDS
AAAGACAAGGAAGGTGGTGG+TGG 0.508002 4_1:+38869846 Msa0546680:CDS
TATGGAAATGTGAATGTTGA+AGG 0.513188 4_1:+38870011 Msa0546680:CDS
TGATGAATGATGGATGATAA+TGG 0.515149 4_1:+38870191 Msa0546680:three_prime_UTR
CACATGACAATGCAAGCATT+AGG 0.517378 4_1:-38870116 None:intergenic
AAAATTGTTATGAAAACTAA+AGG 0.517522 4_1:+38869585 Msa0546680:CDS
GAGGTAAGAAGAAGAACAAG+GGG 0.518923 4_1:+38869907 Msa0546680:CDS
AACATGATGGTGATGAATGA+TGG 0.526678 4_1:+38870181 Msa0546680:three_prime_UTR
GAAAGATAATGTGACTGTGA+AGG 0.527421 4_1:+38869746 Msa0546680:CDS
AAGGATGGAAATGAAGGAGG+AGG 0.528175 4_1:+38869879 Msa0546680:CDS
GATAGCAATAACAATGAAGC+AGG 0.531629 4_1:+38869936 Msa0546680:CDS
CAACAACAATGAAGGAAACA+AGG 0.532707 4_1:+38868813 Msa0546680:CDS
CCTTCAACACCTTTCAACAA+TGG 0.534794 4_1:+38868598 Msa0546680:exon
TTTCCATAACCAAGACCAAA+GGG 0.543340 4_1:-38869996 None:intergenic
ACCGGAAAAGTAACCGTCAC+CGG 0.547833 4_1:+38869238 Msa0546680:CDS
AAAGATAATGTGACTGTGAA+GGG 0.555744 4_1:+38869747 Msa0546680:CDS
AAACACCTTAACAGCATCAA+AGG 0.557937 4_1:+38869036 Msa0546680:CDS
GGTGAGAAGGATGGAAATGA+AGG 0.559036 4_1:+38869873 Msa0546680:CDS
GGTAAGAAGAAGAACAAGGG+GGG 0.560885 4_1:+38869909 Msa0546680:CDS
TTATTACCGCCATTGTTGAA+AGG 0.565823 4_1:-38868607 None:intergenic
AGGTAAGAAGAAGAACAAGG+GGG 0.566617 4_1:+38869908 Msa0546680:CDS
TACCAATTTCAAAACAGAAG+TGG 0.568866 4_1:-38869529 None:intergenic
AGTAATGTGAATGATGATAT+GGG 0.569114 4_1:+38870453 Msa0546680:three_prime_UTR
AGTAACCGTCACCGGAAATG+TGG 0.571019 4_1:+38869246 Msa0546680:CDS
GAGAAGGATGGAAATGAAGG+AGG 0.571182 4_1:+38869876 Msa0546680:CDS
CAAGAAGGATAACAACAAGA+AGG 0.577155 4_1:+38869339 Msa0546680:CDS
AAAGTTTATATGCATTGCGA+AGG 0.581995 4_1:+38868994 Msa0546680:CDS
GGAGGTAAGAAGAAGAACAA+GGG 0.601818 4_1:+38869906 Msa0546680:CDS
AGCAATAACAATGAAGCAGG+AGG 0.605951 4_1:+38869939 Msa0546680:CDS
GGGAGGTAAGAAGAAGAACA+AGG 0.606219 4_1:+38869905 Msa0546680:CDS
GATAATGGTGATGATGATGA+TGG 0.610461 4_1:+38870206 Msa0546680:three_prime_UTR
AAGAAGGAAGAGAACAACAA+AGG 0.625603 4_1:+38868949 Msa0546680:CDS
AAATTGGTACTACACTGTCA+AGG 0.625937 4_1:+38869543 Msa0546680:CDS
TCATCACTAAACATTTGTGG+TGG 0.630320 4_1:-38870089 None:intergenic
TTTGTTGATTCCATGAGACA+GGG 0.631407 4_1:+38870232 Msa0546680:three_prime_UTR
AAGAAAGACAAGGAAGGTGG+TGG 0.634788 4_1:+38869843 Msa0546680:CDS
TGTGACTGTGAAGGGTACAA+TGG 0.642558 4_1:+38869755 Msa0546680:CDS
GGAGGAGAGAAGAACAACAA+TGG 0.646517 4_1:+38868919 Msa0546680:CDS
TCAACACCTTTCAACAATGG+CGG 0.648351 4_1:+38868601 Msa0546680:exon
CCAAAGAAAGACAAGGAAGG+TGG 0.648516 4_1:+38869840 Msa0546680:CDS
ATTTCCATAACCAAGACCAA+AGG 0.653709 4_1:-38869997 None:intergenic
CAACCAAAGAAAGACAAGGA+AGG 0.655515 4_1:+38869837 Msa0546680:CDS
ATGGAAATGTGAATGTTGAA+GGG 0.655852 4_1:+38870012 Msa0546680:CDS
GGAGAGAAGAACAACAATGG+AGG 0.671058 4_1:+38868922 Msa0546680:CDS
TGTTCAACCAAAGAAAGACA+AGG 0.687873 4_1:+38869833 Msa0546680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATGATTTGTTTTAATTTTT+TGG + chr4_1:38869467-38869486 Msa0546680:intron 10.0%
!!! ATGATTTGTTTTAATTTTTT+GGG + chr4_1:38869468-38869487 Msa0546680:intron 10.0%
!!! AATGATTTGTTTTAATTTTT+TGG + chr4_1:38869467-38869486 Msa0546680:intron 10.0%
!!! ATGATTTGTTTTAATTTTTT+GGG + chr4_1:38869468-38869487 Msa0546680:intron 10.0%
!! ACAAAACAAAAACAAAAAAT+GGG - chr4_1:38868687-38868706 None:intergenic 15.0%
!! AACAAAACAAAAACAAAAAA+TGG - chr4_1:38868688-38868707 None:intergenic 15.0%
!! TAGATAAAAACAAGTTATTA+AGG - chr4_1:38869126-38869145 None:intergenic 15.0%
!! AAAATTGTTATGAAAACTAA+AGG + chr4_1:38869585-38869604 Msa0546680:CDS 15.0%
!!! TATTTTTTTTCTCTATGATT+TGG + chr4_1:38869648-38869667 Msa0546680:intron 15.0%
!! AAAACATTAAAAAAGAAAAG+TGG - chr4_1:38870317-38870336 None:intergenic 15.0%
!!! TTTCTTTTTTAATGTTTTAG+AGG + chr4_1:38870319-38870338 Msa0546680:three_prime_UTR 15.0%
!! CTAAAACAAATTCTTAAAAT+TGG - chr4_1:38870402-38870421 None:intergenic 15.0%
!! ACAAAACAAAAACAAAAAAT+GGG - chr4_1:38868687-38868706 None:intergenic 15.0%
!! AACAAAACAAAAACAAAAAA+TGG - chr4_1:38868688-38868707 None:intergenic 15.0%
!! TAGATAAAAACAAGTTATTA+AGG - chr4_1:38869126-38869145 None:intergenic 15.0%
!! AAAATTGTTATGAAAACTAA+AGG + chr4_1:38869585-38869604 Msa0546680:CDS 15.0%
!!! TATTTTTTTTCTCTATGATT+TGG + chr4_1:38869648-38869667 Msa0546680:intron 15.0%
!! AAAACATTAAAAAAGAAAAG+TGG - chr4_1:38870317-38870336 None:intergenic 15.0%
!!! TTTCTTTTTTAATGTTTTAG+AGG + chr4_1:38870319-38870338 Msa0546680:three_prime_UTR 15.0%
!! CTAAAACAAATTCTTAAAAT+TGG - chr4_1:38870402-38870421 None:intergenic 15.0%
!! TTACAGAAGAAGAAAAATAA+GGG + chr4_1:38868709-38868728 Msa0546680:intron 20.0%
!! TATGAATATTTAACATCTCT+TGG - chr4_1:38870058-38870077 None:intergenic 20.0%
!! TTAATACATTAGACATCATA+TGG + chr4_1:38870371-38870390 Msa0546680:three_prime_UTR 20.0%
!! TTACAGAAGAAGAAAAATAA+GGG + chr4_1:38868709-38868728 Msa0546680:intron 20.0%
!! TATGAATATTTAACATCTCT+TGG - chr4_1:38870058-38870077 None:intergenic 20.0%
!! TTAATACATTAGACATCATA+TGG + chr4_1:38870371-38870390 Msa0546680:three_prime_UTR 20.0%
! CTTACAGAAGAAGAAAAATA+AGG + chr4_1:38868708-38868727 Msa0546680:intron 25.0%
! AACAACAAAAACAACAACAA+TGG + chr4_1:38868898-38868917 Msa0546680:CDS 25.0%
! GAAAAAATGTATAGAAACAG+AGG - chr4_1:38869080-38869099 None:intergenic 25.0%
!!! TCGTTTTGTGTGTTTTATTA+AGG + chr4_1:38869187-38869206 Msa0546680:intron 25.0%
!!! GTTTTATTAAGGTGTTGATA+CGG + chr4_1:38869198-38869217 Msa0546680:intron 25.0%
!!! TTCTCATCAGATTTTTTGTT+TGG - chr4_1:38869373-38869392 None:intergenic 25.0%
! GAAAAATGAAGACAAAAAAG+AGG + chr4_1:38869393-38869412 Msa0546680:CDS 25.0%
!! AAGGATGTATTGATAAGATT+GGG + chr4_1:38869562-38869581 Msa0546680:CDS 25.0%
!!! AGTTAAGATAATGGAGTATA+TGG + chr4_1:38869965-38869984 Msa0546680:CDS 25.0%
! TTTCATTCAATTCAACATGA+TGG + chr4_1:38870168-38870187 Msa0546680:three_prime_UTR 25.0%
!!! TAATGTTTTAGAGGTATGTA+AGG + chr4_1:38870328-38870347 Msa0546680:three_prime_UTR 25.0%
! AGTAATGTGAATGATGATAT+GGG + chr4_1:38870453-38870472 Msa0546680:three_prime_UTR 25.0%
! CTTACAGAAGAAGAAAAATA+AGG + chr4_1:38868708-38868727 Msa0546680:intron 25.0%
! AACAACAAAAACAACAACAA+TGG + chr4_1:38868898-38868917 Msa0546680:CDS 25.0%
! GAAAAAATGTATAGAAACAG+AGG - chr4_1:38869080-38869099 None:intergenic 25.0%
!!! TCGTTTTGTGTGTTTTATTA+AGG + chr4_1:38869187-38869206 Msa0546680:intron 25.0%
!!! GTTTTATTAAGGTGTTGATA+CGG + chr4_1:38869198-38869217 Msa0546680:intron 25.0%
!!! TTCTCATCAGATTTTTTGTT+TGG - chr4_1:38869373-38869392 None:intergenic 25.0%
! GAAAAATGAAGACAAAAAAG+AGG + chr4_1:38869393-38869412 Msa0546680:CDS 25.0%
!! AAGGATGTATTGATAAGATT+GGG + chr4_1:38869562-38869581 Msa0546680:CDS 25.0%
!!! AGTTAAGATAATGGAGTATA+TGG + chr4_1:38869965-38869984 Msa0546680:CDS 25.0%
! TTTCATTCAATTCAACATGA+TGG + chr4_1:38870168-38870187 Msa0546680:three_prime_UTR 25.0%
!!! TAATGTTTTAGAGGTATGTA+AGG + chr4_1:38870328-38870347 Msa0546680:three_prime_UTR 25.0%
! AGTAATGTGAATGATGATAT+GGG + chr4_1:38870453-38870472 Msa0546680:three_prime_UTR 25.0%
! AGAAAAGTGTGATTTGGAAT+TGG - chr4_1:38868571-38868590 None:intergenic 30.0%
! AGAAGAAGAAAAGTGTGATT+TGG - chr4_1:38868577-38868596 None:intergenic 30.0%
AAGAAAAATAAGGGTGGAAA+TGG + chr4_1:38868718-38868737 Msa0546680:CDS 30.0%
AACAACAACAACAACAACAA+TGG + chr4_1:38868757-38868776 Msa0546680:CDS 30.0%
GAAAACAACAACAACAATGA+AGG + chr4_1:38868805-38868824 Msa0546680:CDS 30.0%
AACAACAACAACAACAACAA+TGG + chr4_1:38868757-38868776 Msa0546680:CDS 30.0%
AACAAAAACAACAACAATGG+AGG + chr4_1:38868901-38868920 Msa0546680:CDS 30.0%
AAAGTTTATATGCATTGCGA+AGG + chr4_1:38868994-38869013 Msa0546680:CDS 30.0%
!!! TCTATACATTTTTTCCGATC+TGG + chr4_1:38869085-38869104 Msa0546680:intron 30.0%
!!! CTATACATTTTTTCCGATCT+GGG + chr4_1:38869086-38869105 Msa0546680:intron 30.0%
AAACACACAAAACGAAAACA+TGG - chr4_1:38869182-38869201 None:intergenic 30.0%
!! TTCTTGTTGTTATCCTTCTT+GGG - chr4_1:38869340-38869359 None:intergenic 30.0%
AGGTTCTGTTCTTTCTAATT+TGG + chr4_1:38869413-38869432 Msa0546680:intron 30.0%
!!! TACCACTTCTGTTTTGAAAT+TGG + chr4_1:38869527-38869546 Msa0546680:CDS 30.0%
TACCAATTTCAAAACAGAAG+TGG - chr4_1:38869532-38869551 None:intergenic 30.0%
! CAAGGATGTATTGATAAGAT+TGG + chr4_1:38869561-38869580 Msa0546680:CDS 30.0%
!! CATATGATTTTGATGTGTGT+AGG + chr4_1:38869696-38869715 Msa0546680:intron 30.0%
AAAGATAATGTGACTGTGAA+GGG + chr4_1:38869747-38869766 Msa0546680:CDS 30.0%
TATGGAAATGTGAATGTTGA+AGG + chr4_1:38870011-38870030 Msa0546680:CDS 30.0%
ATGGAAATGTGAATGTTGAA+GGG + chr4_1:38870012-38870031 Msa0546680:CDS 30.0%
TTCTCATCACTAAACATTTG+TGG - chr4_1:38870095-38870114 None:intergenic 30.0%
!! TGATGAATGATGGATGATAA+TGG + chr4_1:38870191-38870210 Msa0546680:three_prime_UTR 30.0%
!! TTTTAGAGGTATGTAAGGAA+GGG + chr4_1:38870333-38870352 Msa0546680:three_prime_UTR 30.0%
GAGTAATGTGAATGATGATA+TGG + chr4_1:38870452-38870471 Msa0546680:three_prime_UTR 30.0%
! AGAAAAGTGTGATTTGGAAT+TGG - chr4_1:38868571-38868590 None:intergenic 30.0%
! AGAAGAAGAAAAGTGTGATT+TGG - chr4_1:38868577-38868596 None:intergenic 30.0%
AAGAAAAATAAGGGTGGAAA+TGG + chr4_1:38868718-38868737 Msa0546680:CDS 30.0%
AACAACAACAACAACAACAA+TGG + chr4_1:38868757-38868776 Msa0546680:CDS 30.0%
GAAAACAACAACAACAATGA+AGG + chr4_1:38868805-38868824 Msa0546680:CDS 30.0%
AACAACAACAACAACAACAA+TGG + chr4_1:38868757-38868776 Msa0546680:CDS 30.0%
AACAAAAACAACAACAATGG+AGG + chr4_1:38868901-38868920 Msa0546680:CDS 30.0%
AAAGTTTATATGCATTGCGA+AGG + chr4_1:38868994-38869013 Msa0546680:CDS 30.0%
!!! TCTATACATTTTTTCCGATC+TGG + chr4_1:38869085-38869104 Msa0546680:intron 30.0%
!!! CTATACATTTTTTCCGATCT+GGG + chr4_1:38869086-38869105 Msa0546680:intron 30.0%
AAACACACAAAACGAAAACA+TGG - chr4_1:38869182-38869201 None:intergenic 30.0%
!! TTCTTGTTGTTATCCTTCTT+GGG - chr4_1:38869340-38869359 None:intergenic 30.0%
AGGTTCTGTTCTTTCTAATT+TGG + chr4_1:38869413-38869432 Msa0546680:intron 30.0%
!!! TACCACTTCTGTTTTGAAAT+TGG + chr4_1:38869527-38869546 Msa0546680:CDS 30.0%
TACCAATTTCAAAACAGAAG+TGG - chr4_1:38869532-38869551 None:intergenic 30.0%
! CAAGGATGTATTGATAAGAT+TGG + chr4_1:38869561-38869580 Msa0546680:CDS 30.0%
!! CATATGATTTTGATGTGTGT+AGG + chr4_1:38869696-38869715 Msa0546680:intron 30.0%
AAAGATAATGTGACTGTGAA+GGG + chr4_1:38869747-38869766 Msa0546680:CDS 30.0%
TATGGAAATGTGAATGTTGA+AGG + chr4_1:38870011-38870030 Msa0546680:CDS 30.0%
ATGGAAATGTGAATGTTGAA+GGG + chr4_1:38870012-38870031 Msa0546680:CDS 30.0%
TTCTCATCACTAAACATTTG+TGG - chr4_1:38870095-38870114 None:intergenic 30.0%
!! TGATGAATGATGGATGATAA+TGG + chr4_1:38870191-38870210 Msa0546680:three_prime_UTR 30.0%
!! TTTTAGAGGTATGTAAGGAA+GGG + chr4_1:38870333-38870352 Msa0546680:three_prime_UTR 30.0%
GAGTAATGTGAATGATGATA+TGG + chr4_1:38870452-38870471 Msa0546680:three_prime_UTR 30.0%
! GTGTGATTTGGAATTGGAAT+TGG - chr4_1:38868565-38868584 None:intergenic 35.0%
TTATTACCGCCATTGTTGAA+AGG - chr4_1:38868610-38868629 None:intergenic 35.0%
CAGAAGAAGAAAAATAAGGG+TGG + chr4_1:38868712-38868731 Msa0546680:intron 35.0%
AAAAATAAGGGTGGAAATGG+TGG + chr4_1:38868721-38868740 Msa0546680:CDS 35.0%
CAACAACAATGAAGGAAACA+AGG + chr4_1:38868813-38868832 Msa0546680:CDS 35.0%
AACAACAACAACAACAATGG+AGG + chr4_1:38868772-38868791 Msa0546680:CDS 35.0%
AAGAAGGAAGAGAACAACAA+AGG + chr4_1:38868949-38868968 Msa0546680:CDS 35.0%
! TTTGATGCTGTTAAGGTGTT+TGG - chr4_1:38869037-38869056 None:intergenic 35.0%
AAACACCTTAACAGCATCAA+AGG + chr4_1:38869036-38869055 Msa0546680:CDS 35.0%
TGAAACCTTTGATGCTGTTA+AGG - chr4_1:38869044-38869063 None:intergenic 35.0%
ACATTGATGAAAACCCAGAT+CGG - chr4_1:38869102-38869121 None:intergenic 35.0%
!! AGATTGTCTCTCAGTTTTGT+GGG - chr4_1:38869274-38869293 None:intergenic 35.0%
! AAGATTGTCTCTCAGTTTTG+TGG - chr4_1:38869275-38869294 None:intergenic 35.0%
!! CTTCTTGTTGTTATCCTTCT+TGG - chr4_1:38869341-38869360 None:intergenic 35.0%
CAAGAAGGATAACAACAAGA+AGG + chr4_1:38869339-38869358 Msa0546680:CDS 35.0%
AAATTGGTACTACACTGTCA+AGG + chr4_1:38869543-38869562 Msa0546680:CDS 35.0%
GAAAGATAATGTGACTGTGA+AGG + chr4_1:38869746-38869765 Msa0546680:CDS 35.0%
ATCACAGAAGCTTAAGAGAA+AGG + chr4_1:38869803-38869822 Msa0546680:CDS 35.0%
TGTTCAACCAAAGAAAGACA+AGG + chr4_1:38869833-38869852 Msa0546680:CDS 35.0%
GATAGCAATAACAATGAAGC+AGG + chr4_1:38869936-38869955 Msa0546680:CDS 35.0%
AGGAGGAGAAGTTAAGATAA+TGG + chr4_1:38869956-38869975 Msa0546680:CDS 35.0%
TATATGGTTCAACAACCCTT+TGG + chr4_1:38869981-38870000 Msa0546680:CDS 35.0%
TTTCCATAACCAAGACCAAA+GGG - chr4_1:38869999-38870018 None:intergenic 35.0%
ATTTCCATAACCAAGACCAA+AGG - chr4_1:38870000-38870019 None:intergenic 35.0%
TCATCACTAAACATTTGTGG+TGG - chr4_1:38870092-38870111 None:intergenic 35.0%
! AACATGATGGTGATGAATGA+TGG + chr4_1:38870181-38870200 Msa0546680:three_prime_UTR 35.0%
! GATAATGGTGATGATGATGA+TGG + chr4_1:38870206-38870225 Msa0546680:three_prime_UTR 35.0%
!!! TTTTGTTGATTCCATGAGAC+AGG + chr4_1:38870231-38870250 Msa0546680:three_prime_UTR 35.0%
!! TTTGTTGATTCCATGAGACA+GGG + chr4_1:38870232-38870251 Msa0546680:three_prime_UTR 35.0%
!!! GTTTTAGAGGTATGTAAGGA+AGG + chr4_1:38870332-38870351 Msa0546680:three_prime_UTR 35.0%
! GTGTGATTTGGAATTGGAAT+TGG - chr4_1:38868565-38868584 None:intergenic 35.0%
TTATTACCGCCATTGTTGAA+AGG - chr4_1:38868610-38868629 None:intergenic 35.0%
CAGAAGAAGAAAAATAAGGG+TGG + chr4_1:38868712-38868731 Msa0546680:intron 35.0%
AAAAATAAGGGTGGAAATGG+TGG + chr4_1:38868721-38868740 Msa0546680:CDS 35.0%
CAACAACAATGAAGGAAACA+AGG + chr4_1:38868813-38868832 Msa0546680:CDS 35.0%
AACAACAACAACAACAATGG+AGG + chr4_1:38868772-38868791 Msa0546680:CDS 35.0%
AAGAAGGAAGAGAACAACAA+AGG + chr4_1:38868949-38868968 Msa0546680:CDS 35.0%
! TTTGATGCTGTTAAGGTGTT+TGG - chr4_1:38869037-38869056 None:intergenic 35.0%
AAACACCTTAACAGCATCAA+AGG + chr4_1:38869036-38869055 Msa0546680:CDS 35.0%
TGAAACCTTTGATGCTGTTA+AGG - chr4_1:38869044-38869063 None:intergenic 35.0%
ACATTGATGAAAACCCAGAT+CGG - chr4_1:38869102-38869121 None:intergenic 35.0%
!! AGATTGTCTCTCAGTTTTGT+GGG - chr4_1:38869274-38869293 None:intergenic 35.0%
! AAGATTGTCTCTCAGTTTTG+TGG - chr4_1:38869275-38869294 None:intergenic 35.0%
!! CTTCTTGTTGTTATCCTTCT+TGG - chr4_1:38869341-38869360 None:intergenic 35.0%
CAAGAAGGATAACAACAAGA+AGG + chr4_1:38869339-38869358 Msa0546680:CDS 35.0%
AAATTGGTACTACACTGTCA+AGG + chr4_1:38869543-38869562 Msa0546680:CDS 35.0%
GAAAGATAATGTGACTGTGA+AGG + chr4_1:38869746-38869765 Msa0546680:CDS 35.0%
ATCACAGAAGCTTAAGAGAA+AGG + chr4_1:38869803-38869822 Msa0546680:CDS 35.0%
TGTTCAACCAAAGAAAGACA+AGG + chr4_1:38869833-38869852 Msa0546680:CDS 35.0%
GATAGCAATAACAATGAAGC+AGG + chr4_1:38869936-38869955 Msa0546680:CDS 35.0%
AGGAGGAGAAGTTAAGATAA+TGG + chr4_1:38869956-38869975 Msa0546680:CDS 35.0%
TATATGGTTCAACAACCCTT+TGG + chr4_1:38869981-38870000 Msa0546680:CDS 35.0%
TTTCCATAACCAAGACCAAA+GGG - chr4_1:38869999-38870018 None:intergenic 35.0%
ATTTCCATAACCAAGACCAA+AGG - chr4_1:38870000-38870019 None:intergenic 35.0%
TCATCACTAAACATTTGTGG+TGG - chr4_1:38870092-38870111 None:intergenic 35.0%
! AACATGATGGTGATGAATGA+TGG + chr4_1:38870181-38870200 Msa0546680:three_prime_UTR 35.0%
! GATAATGGTGATGATGATGA+TGG + chr4_1:38870206-38870225 Msa0546680:three_prime_UTR 35.0%
!!! TTTTGTTGATTCCATGAGAC+AGG + chr4_1:38870231-38870250 Msa0546680:three_prime_UTR 35.0%
!! TTTGTTGATTCCATGAGACA+GGG + chr4_1:38870232-38870251 Msa0546680:three_prime_UTR 35.0%
!!! GTTTTAGAGGTATGTAAGGA+AGG + chr4_1:38870332-38870351 Msa0546680:three_prime_UTR 35.0%
!! CCATTGTTGAAAGGTGTTGA+AGG - chr4_1:38868601-38868620 None:intergenic 40.0%
CCTTCAACACCTTTCAACAA+TGG + chr4_1:38868598-38868617 Msa0546680:exon 40.0%
TCAACACCTTTCAACAATGG+CGG + chr4_1:38868601-38868620 Msa0546680:exon 40.0%
CAACAATGGAGGAGATAAGA+AGG + chr4_1:38868933-38868952 Msa0546680:CDS 40.0%
CAAAGGCAAAAACAACGCTA+CGG + chr4_1:38868966-38868985 Msa0546680:CDS 40.0%
!! GATTGTCTCTCAGTTTTGTG+GGG - chr4_1:38869273-38869292 None:intergenic 40.0%
TTGTTATCCTTCTTGGGAAG+TGG - chr4_1:38869334-38869353 None:intergenic 40.0%
GAAGCTTAAGAGAAAGGTTG+AGG + chr4_1:38869809-38869828 Msa0546680:CDS 40.0%
CAACCAAAGAAAGACAAGGA+AGG + chr4_1:38869837-38869856 Msa0546680:CDS 40.0%
GGAGGTAAGAAGAAGAACAA+GGG + chr4_1:38869906-38869925 Msa0546680:CDS 40.0%
GAGGTAAGAAGAAGAACAAG+GGG + chr4_1:38869907-38869926 Msa0546680:CDS 40.0%
AGGTAAGAAGAAGAACAAGG+GGG + chr4_1:38869908-38869927 Msa0546680:CDS 40.0%
AGCAATAACAATGAAGCAGG+AGG + chr4_1:38869939-38869958 Msa0546680:CDS 40.0%
CACATGACAATGCAAGCATT+AGG - chr4_1:38870119-38870138 None:intergenic 40.0%
ATTCCATGAGACAGGGAAAA+AGG + chr4_1:38870239-38870258 Msa0546680:three_prime_UTR 40.0%
TTCCATGAGACAGGGAAAAA+GGG + chr4_1:38870240-38870259 Msa0546680:three_prime_UTR 40.0%
!! CCATTGTTGAAAGGTGTTGA+AGG - chr4_1:38868601-38868620 None:intergenic 40.0%
CCTTCAACACCTTTCAACAA+TGG + chr4_1:38868598-38868617 Msa0546680:exon 40.0%
TCAACACCTTTCAACAATGG+CGG + chr4_1:38868601-38868620 Msa0546680:exon 40.0%
CAACAATGGAGGAGATAAGA+AGG + chr4_1:38868933-38868952 Msa0546680:CDS 40.0%
CAAAGGCAAAAACAACGCTA+CGG + chr4_1:38868966-38868985 Msa0546680:CDS 40.0%
!! GATTGTCTCTCAGTTTTGTG+GGG - chr4_1:38869273-38869292 None:intergenic 40.0%
TTGTTATCCTTCTTGGGAAG+TGG - chr4_1:38869334-38869353 None:intergenic 40.0%
GAAGCTTAAGAGAAAGGTTG+AGG + chr4_1:38869809-38869828 Msa0546680:CDS 40.0%
CAACCAAAGAAAGACAAGGA+AGG + chr4_1:38869837-38869856 Msa0546680:CDS 40.0%
GGAGGTAAGAAGAAGAACAA+GGG + chr4_1:38869906-38869925 Msa0546680:CDS 40.0%
GAGGTAAGAAGAAGAACAAG+GGG + chr4_1:38869907-38869926 Msa0546680:CDS 40.0%
AGGTAAGAAGAAGAACAAGG+GGG + chr4_1:38869908-38869927 Msa0546680:CDS 40.0%
AGCAATAACAATGAAGCAGG+AGG + chr4_1:38869939-38869958 Msa0546680:CDS 40.0%
CACATGACAATGCAAGCATT+AGG - chr4_1:38870119-38870138 None:intergenic 40.0%
ATTCCATGAGACAGGGAAAA+AGG + chr4_1:38870239-38870258 Msa0546680:three_prime_UTR 40.0%
TTCCATGAGACAGGGAAAAA+GGG + chr4_1:38870240-38870259 Msa0546680:three_prime_UTR 40.0%
CAACAATGGAGGAGAGAAGA+AGG + chr4_1:38868870-38868889 Msa0546680:CDS 45.0%
GGAGGAGAGAAGAACAACAA+TGG + chr4_1:38868919-38868938 Msa0546680:CDS 45.0%
GGAGAGAAGAACAACAATGG+AGG + chr4_1:38868922-38868941 Msa0546680:CDS 45.0%
GTGAAAGCAGAGAGTGAAAC+CGG + chr4_1:38869220-38869239 Msa0546680:CDS 45.0%
! TTTTGTGGGGTCCACATTTC+CGG - chr4_1:38869260-38869279 None:intergenic 45.0%
CATTTCACCACTTCCCAAGA+AGG + chr4_1:38869324-38869343 Msa0546680:CDS 45.0%
! TGTGACTGTGAAGGGTACAA+TGG + chr4_1:38869755-38869774 Msa0546680:CDS 45.0%
CCACCTTCCTTGTCTTTCTT+TGG - chr4_1:38869843-38869862 None:intergenic 45.0%
CCAAAGAAAGACAAGGAAGG+TGG + chr4_1:38869840-38869859 Msa0546680:CDS 45.0%
AAGAAAGACAAGGAAGGTGG+TGG + chr4_1:38869843-38869862 Msa0546680:CDS 45.0%
GGTGAGAAGGATGGAAATGA+AGG + chr4_1:38869873-38869892 Msa0546680:CDS 45.0%
GAGAAGGATGGAAATGAAGG+AGG + chr4_1:38869876-38869895 Msa0546680:CDS 45.0%
AAGGATGGAAATGAAGGAGG+AGG + chr4_1:38869879-38869898 Msa0546680:CDS 45.0%
ATGGAAATGAAGGAGGAGGT+GGG + chr4_1:38869883-38869902 Msa0546680:CDS 45.0%
GGGAGGTAAGAAGAAGAACA+AGG + chr4_1:38869905-38869924 Msa0546680:CDS 45.0%
GGTAAGAAGAAGAACAAGGG+GGG + chr4_1:38869909-38869928 Msa0546680:CDS 45.0%
GTTCAACAACCCTTTGGTCT+TGG + chr4_1:38869987-38870006 Msa0546680:CDS 45.0%
!! CAACCCTTTGGTCTTGGTTA+TGG + chr4_1:38869993-38870012 Msa0546680:CDS 45.0%
TCCATGAGACAGGGAAAAAG+GGG + chr4_1:38870241-38870260 Msa0546680:three_prime_UTR 45.0%
CAACAATGGAGGAGAGAAGA+AGG + chr4_1:38868870-38868889 Msa0546680:CDS 45.0%
GGAGGAGAGAAGAACAACAA+TGG + chr4_1:38868919-38868938 Msa0546680:CDS 45.0%
GGAGAGAAGAACAACAATGG+AGG + chr4_1:38868922-38868941 Msa0546680:CDS 45.0%
GTGAAAGCAGAGAGTGAAAC+CGG + chr4_1:38869220-38869239 Msa0546680:CDS 45.0%
! TTTTGTGGGGTCCACATTTC+CGG - chr4_1:38869260-38869279 None:intergenic 45.0%
CATTTCACCACTTCCCAAGA+AGG + chr4_1:38869324-38869343 Msa0546680:CDS 45.0%
! TGTGACTGTGAAGGGTACAA+TGG + chr4_1:38869755-38869774 Msa0546680:CDS 45.0%
CCACCTTCCTTGTCTTTCTT+TGG - chr4_1:38869843-38869862 None:intergenic 45.0%
CCAAAGAAAGACAAGGAAGG+TGG + chr4_1:38869840-38869859 Msa0546680:CDS 45.0%
AAGAAAGACAAGGAAGGTGG+TGG + chr4_1:38869843-38869862 Msa0546680:CDS 45.0%
GGTGAGAAGGATGGAAATGA+AGG + chr4_1:38869873-38869892 Msa0546680:CDS 45.0%
GAGAAGGATGGAAATGAAGG+AGG + chr4_1:38869876-38869895 Msa0546680:CDS 45.0%
AAGGATGGAAATGAAGGAGG+AGG + chr4_1:38869879-38869898 Msa0546680:CDS 45.0%
ATGGAAATGAAGGAGGAGGT+GGG + chr4_1:38869883-38869902 Msa0546680:CDS 45.0%
GGGAGGTAAGAAGAAGAACA+AGG + chr4_1:38869905-38869924 Msa0546680:CDS 45.0%
GGTAAGAAGAAGAACAAGGG+GGG + chr4_1:38869909-38869928 Msa0546680:CDS 45.0%
GTTCAACAACCCTTTGGTCT+TGG + chr4_1:38869987-38870006 Msa0546680:CDS 45.0%
!! CAACCCTTTGGTCTTGGTTA+TGG + chr4_1:38869993-38870012 Msa0546680:CDS 45.0%
TCCATGAGACAGGGAAAAAG+GGG + chr4_1:38870241-38870260 Msa0546680:three_prime_UTR 45.0%
ACCGGAAAAGTAACCGTCAC+CGG + chr4_1:38869238-38869257 Msa0546680:CDS 50.0%
!!! TCCGGTGACGGTTACTTTTC+CGG - chr4_1:38869242-38869261 None:intergenic 50.0%
AGTAACCGTCACCGGAAATG+TGG + chr4_1:38869246-38869265 Msa0546680:CDS 50.0%
! AAAGACAAGGAAGGTGGTGG+TGG + chr4_1:38869846-38869865 Msa0546680:CDS 50.0%
GATGGAAATGAAGGAGGAGG+TGG + chr4_1:38869882-38869901 Msa0546680:CDS 50.0%
TGGAAATGAAGGAGGAGGTG+GGG + chr4_1:38869884-38869903 Msa0546680:CDS 50.0%
AAGAAGAAGAACAAGGGGGG+TGG + chr4_1:38869912-38869931 Msa0546680:CDS 50.0%
! ACCCCTTTTTCCCTGTCTCA+TGG - chr4_1:38870245-38870264 None:intergenic 50.0%
ACCGGAAAAGTAACCGTCAC+CGG + chr4_1:38869238-38869257 Msa0546680:CDS 50.0%
!!! TCCGGTGACGGTTACTTTTC+CGG - chr4_1:38869242-38869261 None:intergenic 50.0%
AGTAACCGTCACCGGAAATG+TGG + chr4_1:38869246-38869265 Msa0546680:CDS 50.0%
! AAAGACAAGGAAGGTGGTGG+TGG + chr4_1:38869846-38869865 Msa0546680:CDS 50.0%
GATGGAAATGAAGGAGGAGG+TGG + chr4_1:38869882-38869901 Msa0546680:CDS 50.0%
TGGAAATGAAGGAGGAGGTG+GGG + chr4_1:38869884-38869903 Msa0546680:CDS 50.0%
AAGAAGAAGAACAAGGGGGG+TGG + chr4_1:38869912-38869931 Msa0546680:CDS 50.0%
! ACCCCTTTTTCCCTGTCTCA+TGG - chr4_1:38870245-38870264 None:intergenic 50.0%
GGAAATGAAGGAGGAGGTGG+GGG + chr4_1:38869885-38869904 Msa0546680:CDS 55.0%
GGAAATGAAGGAGGAGGTGG+GGG + chr4_1:38869885-38869904 Msa0546680:CDS 55.0%
GGGGTCCACATTTCCGGTGA+CGG - chr4_1:38869254-38869273 None:intergenic 60.0%
!! GACAAGGAAGGTGGTGGTGG+TGG + chr4_1:38869849-38869868 Msa0546680:CDS 60.0%
!! AAGGAAGGTGGTGGTGGTGG+TGG + chr4_1:38869852-38869871 Msa0546680:CDS 60.0%
!! TGGTGGTGGTGGTGGTGAGA+AGG + chr4_1:38869860-38869879 Msa0546680:CDS 60.0%
!! GGTGGTGGTGGTGAGAAGGA+TGG + chr4_1:38869864-38869883 Msa0546680:CDS 60.0%
AATGAAGGAGGAGGTGGGGG+AGG + chr4_1:38869888-38869907 Msa0546680:CDS 60.0%
GGGGTCCACATTTCCGGTGA+CGG - chr4_1:38869254-38869273 None:intergenic 60.0%
!! GACAAGGAAGGTGGTGGTGG+TGG + chr4_1:38869849-38869868 Msa0546680:CDS 60.0%
!! AAGGAAGGTGGTGGTGGTGG+TGG + chr4_1:38869852-38869871 Msa0546680:CDS 60.0%
!! TGGTGGTGGTGGTGGTGAGA+AGG + chr4_1:38869860-38869879 Msa0546680:CDS 60.0%
!! GGTGGTGGTGGTGAGAAGGA+TGG + chr4_1:38869864-38869883 Msa0546680:CDS 60.0%
AATGAAGGAGGAGGTGGGGG+AGG + chr4_1:38869888-38869907 Msa0546680:CDS 60.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 38868535 38870476 38868535 ID=Msa0546680;Name=Msa0546680
chr4_1 mRNA 38868535 38870476 38868535 ID=Msa0546680-mRNA-1;Parent=Msa0546680;Name=Msa0546680-mRNA-1;_AED=0.07;_eAED=0.07;_QI=82|1|1|1|1|1|5|337|353
chr4_1 exon 38868535 38868622 38868535 ID=Msa0546680-mRNA-1:exon:9911;Parent=Msa0546680-mRNA-1
chr4_1 exon 38868715 38869057 38868715 ID=Msa0546680-mRNA-1:exon:9912;Parent=Msa0546680-mRNA-1
chr4_1 exon 38869209 38869414 38869209 ID=Msa0546680-mRNA-1:exon:9913;Parent=Msa0546680-mRNA-1
chr4_1 exon 38869522 38869606 38869522 ID=Msa0546680-mRNA-1:exon:9914;Parent=Msa0546680-mRNA-1
chr4_1 exon 38869718 38870476 38869718 ID=Msa0546680-mRNA-1:exon:9915;Parent=Msa0546680-mRNA-1
chr4_1 five_prime_UTR 38868535 38868616 38868535 ID=Msa0546680-mRNA-1:five_prime_utr;Parent=Msa0546680-mRNA-1
chr4_1 CDS 38868617 38868622 38868617 ID=Msa0546680-mRNA-1:cds;Parent=Msa0546680-mRNA-1
chr4_1 CDS 38868715 38869057 38868715 ID=Msa0546680-mRNA-1:cds;Parent=Msa0546680-mRNA-1
chr4_1 CDS 38869209 38869414 38869209 ID=Msa0546680-mRNA-1:cds;Parent=Msa0546680-mRNA-1
chr4_1 CDS 38869522 38869606 38869522 ID=Msa0546680-mRNA-1:cds;Parent=Msa0546680-mRNA-1
chr4_1 CDS 38869718 38870139 38869718 ID=Msa0546680-mRNA-1:cds;Parent=Msa0546680-mRNA-1
chr4_1 three_prime_UTR 38870140 38870476 38870140 ID=Msa0546680-mRNA-1:three_prime_utr;Parent=Msa0546680-mRNA-1
Gene Sequence

>Msa0546680

ATGGCGAAGAAGAAAAATAAGGGTGGAAATGGTGGAAATAATGCTGAAAACAACAACAACAACAACAACAACAACAACAATGGTGAAAACAAAGAAGAAAACAACAACAACAATGAAGGAAACAAGGAAGAAAACAACAACAACAACAACAACAACAACAACAACAATGGAGGAGAGAAGAAGGAAGAAAACAACAAAAACAACAACAATGGAGGAGAGAAGAACAACAATGGAGGAGATAAGAAGGAAGAGAACAACAAAGGCAAAAACAACGCTACGGTTTTGAAAGTTTATATGCATTGCGAAGGTTGCGCTAACAAAGTCACCAAACACCTTAACAGCATCAAAGGTGTTGATACGGTGAAAGCAGAGAGTGAAACCGGAAAAGTAACCGTCACCGGAAATGTGGACCCCACAAAACTGAGAGACAATCTTGCTGAGAAGATAAAGAAGAAAGTTGAACTCATTTCACCACTTCCCAAGAAGGATAACAACAAGAAGGAAAATGAACCAAACAAAAAATCTGATGAGAAGAAAAATGAAGACAAAAAAGAGTCAATTACCACTTCTGTTTTGAAATTGGTACTACACTGTCAAGGATGTATTGATAAGATTGGGAAAATTGTTATGAAAACTAAAGGAGTGCTTGAAATGAAAGTTGATAAAGAGAAAGATAATGTGACTGTGAAGGGTACAATGGATGTGAAAAAGCTAGTTGAGAATTTATCACAGAAGCTTAAGAGAAAGGTTGAGGTTGTTCAACCAAAGAAAGACAAGGAAGGTGGTGGTGGTGGTGGTGAGAAGGATGGAAATGAAGGAGGAGGTGGGGGAGGTAAGAAGAAGAACAAGGGGGGTGGAGATAGCAATAACAATGAAGCAGGAGGAGAAGTTAAGATAATGGAGTATATGGTTCAACAACCCTTTGGTCTTGGTTATGGAAATGTGAATGTTGAAGGGTATAATGCTGCACAAGTCTACCAAGAGATGTTAAATATTCATATGCAAACACAACCACCACAAATGTTTAGTGATGAGAATCCTAATGCTTGCATTGTCATGTGA

Protein sequence

>Msa0546680

MAKKKNKGGNGGNNAENNNNNNNNNNNGENKEENNNNNEGNKEENNNNNNNNNNNNGGEKKEENNKNNNNGGEKNNNGGDKKEENNKGKNNATVLKVYMHCEGCANKVTKHLNSIKGVDTVKAESETGKVTVTGNVDPTKLRDNLAEKIKKKVELISPLPKKDNNKKENEPNKKSDEKKNEDKKESITTSVLKLVLHCQGCIDKIGKIVMKTKGVLEMKVDKEKDNVTVKGTMDVKKLVENLSQKLKRKVEVVQPKKDKEGGGGGGEKDGNEGGGGGGKKKNKGGGDSNNNEAGGEVKIMEYMVQQPFGLGYGNVNVEGYNAAQVYQEMLNIHMQTQPPQMFSDENPNACIVM*