Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0343990 | RHN38827.1 | 95.627 | 343 | 15 | 0 | 1 | 343 | 60 | 402 | 0.0 | 673 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0343990 | sp|Q9SLN8|DBR_TOBAC | 73.021 | 341 | 91 | 1 | 3 | 343 | 4 | 343 | 0.0 | 510 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0343990 | A0A396GJ76 | 95.627 | 343 | 15 | 0 | 1 | 343 | 60 | 402 | 0.0 | 673 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0085580 | Msa0343990 | 0.825867 | 3.708336e-54 | -8.615850e-47 |
| Msa0216550 | Msa0343990 | 0.813764 | 2.169953e-51 | -8.615850e-47 |
| Msa0264240 | Msa0343990 | 0.826089 | 3.284356e-54 | -8.615850e-47 |
| Msa0266380 | Msa0343990 | 0.810344 | 1.207819e-50 | -8.615850e-47 |
| Msa0295850 | Msa0343990 | 0.808614 | 2.840896e-50 | -8.615850e-47 |
| Msa0339560 | Msa0343990 | 0.827033 | 1.955715e-54 | -8.615850e-47 |
| Msa0341860 | Msa0343990 | 0.802799 | 4.725918e-49 | -8.615850e-47 |
| Msa0343990 | Msa0352640 | 0.820545 | 6.483543e-53 | -8.615850e-47 |
| Msa0343990 | Msa0364010 | 0.830786 | 2.413115e-55 | -8.615850e-47 |
| Msa0343990 | Msa0401570 | 0.803988 | 2.679723e-49 | -8.615850e-47 |
| Msa0343990 | Msa0436600 | 0.811817 | 5.790634e-51 | -8.615850e-47 |
| Msa0343990 | Msa0436610 | 0.802475 | 5.513400e-49 | -8.615850e-47 |
| Msa0343990 | Msa0521100 | 0.813132 | 2.987375e-51 | -8.615850e-47 |
| Msa0343990 | Msa0546370 | 0.816738 | 4.736308e-52 | -8.615850e-47 |
| Msa0343990 | Msa0623360 | 0.808736 | 2.674744e-50 | -8.615850e-47 |
| Msa0343990 | Msa0630850 | 0.806063 | 9.867881e-50 | -8.615850e-47 |
| Msa0343990 | Msa0648300 | 0.802579 | 5.246163e-49 | -8.615850e-47 |
| Msa0343990 | Msa0681880 | 0.829917 | 3.937034e-55 | -8.615850e-47 |
| Msa0343990 | Msa0734190 | 0.805668 | 1.194383e-49 | -8.615850e-47 |
| Msa0343990 | Msa0770020 | 0.821683 | 3.543783e-53 | -8.615850e-47 |
| Msa0343990 | Msa0775420 | 0.820759 | 5.789197e-53 | -8.615850e-47 |
| Msa0343990 | Msa0812800 | 0.817865 | 2.642016e-52 | -8.615850e-47 |
| Msa0343990 | Msa1041550 | 0.839873 | 1.221181e-57 | -8.615850e-47 |
| Msa0343990 | Msa1081530 | 0.840560 | 8.077208e-58 | -8.615850e-47 |
| Msa0343990 | Msa1166450 | 0.820125 | 8.092109e-53 | -8.615850e-47 |
| Msa0343990 | Msa1182530 | 0.805986 | 1.023988e-49 | -8.615850e-47 |
| Msa0343990 | Msa1188820 | 0.802581 | 5.240706e-49 | -8.615850e-47 |
| Msa0343990 | Msa1199580 | 0.801148 | 1.032201e-48 | -8.615850e-47 |
| Msa0343990 | Msa1229770 | 0.969024 | 1.614738e-129 | -8.615850e-47 |
| Msa0343990 | Msa1263610 | 0.809721 | 1.644941e-50 | -8.615850e-47 |
| Msa0343990 | Msa1353280 | 0.829206 | 5.861633e-55 | -8.615850e-47 |
| Msa0343990 | Msa1357720 | 0.837449 | 5.165421e-57 | -8.615850e-47 |
| Msa0343990 | Msa1370630 | 0.801618 | 8.270743e-49 | -8.615850e-47 |
| Msa0343990 | Msa1445700 | 0.807125 | 5.888064e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0343990 | MtrunA17_Chr8g0337361 | 95.627 | 343 | 15 | 0 | 1 | 343 | 60 | 402 | 0.0 | 673 |
| Msa0343990 | MtrunA17_Chr8g0337371 | 87.172 | 343 | 43 | 1 | 1 | 343 | 496 | 837 | 0.0 | 622 |
| Msa0343990 | MtrunA17_Chr8g0337371 | 86.053 | 337 | 46 | 1 | 1 | 337 | 49 | 384 | 0.0 | 599 |
| Msa0343990 | MtrunA17_Chr8g0337491 | 81.127 | 355 | 53 | 2 | 1 | 342 | 1 | 354 | 0.0 | 588 |
| Msa0343990 | MtrunA17_Chr8g0337491 | 77.778 | 54 | 12 | 0 | 1 | 54 | 367 | 420 | 1.16e-21 | 95.1 |
| Msa0343990 | MtrunA17_Chr8g0337471 | 80.870 | 345 | 63 | 2 | 1 | 343 | 1 | 344 | 0.0 | 576 |
| Msa0343990 | MtrunA17_Chr8g0337451 | 80.870 | 345 | 63 | 2 | 1 | 343 | 1 | 344 | 0.0 | 571 |
| Msa0343990 | MtrunA17_Chr8g0337481 | 86.397 | 272 | 37 | 0 | 72 | 343 | 14 | 285 | 1.06e-176 | 491 |
| Msa0343990 | MtrunA17_Chr4g0043061 | 67.251 | 342 | 109 | 2 | 4 | 343 | 10 | 350 | 7.82e-166 | 466 |
| Msa0343990 | MtrunA17_Chr8g0335881 | 95.413 | 218 | 10 | 0 | 1 | 218 | 1 | 218 | 1.42e-152 | 427 |
| Msa0343990 | MtrunA17_Chr7g0214831 | 60.756 | 344 | 134 | 1 | 1 | 343 | 3 | 346 | 6.14e-147 | 418 |
| Msa0343990 | MtrunA17_Chr2g0307121 | 47.688 | 346 | 175 | 2 | 3 | 343 | 2 | 346 | 1.82e-112 | 330 |
| Msa0343990 | MtrunA17_Chr2g0322531 | 41.329 | 346 | 191 | 7 | 4 | 340 | 5 | 347 | 2.93e-79 | 246 |
| Msa0343990 | MtrunA17_Chr2g0322551 | 43.434 | 297 | 159 | 6 | 30 | 318 | 31 | 326 | 7.74e-73 | 229 |
| Msa0343990 | MtrunA17_Chr2g0322541 | 38.769 | 325 | 186 | 7 | 4 | 318 | 5 | 326 | 6.06e-68 | 218 |
| Msa0343990 | MtrunA17_Chr5g0445921 | 57.031 | 128 | 55 | 0 | 214 | 341 | 9 | 136 | 2.77e-49 | 161 |
| Msa0343990 | MtrunA17_Chr4g0045061 | 32.922 | 243 | 148 | 6 | 105 | 340 | 388 | 622 | 4.00e-26 | 109 |
| Msa0343990 | MtrunA17_Chr4g0045041 | 35.407 | 209 | 127 | 5 | 138 | 340 | 416 | 622 | 1.47e-25 | 107 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0343990 | AT3G03080.1 | 71.594 | 345 | 94 | 2 | 2 | 343 | 7 | 350 | 2.23e-179 | 501 |
| Msa0343990 | AT5G16970.1 | 70.468 | 342 | 96 | 3 | 6 | 343 | 5 | 345 | 8.44e-179 | 499 |
| Msa0343990 | AT1G26320.1 | 70.930 | 344 | 95 | 3 | 4 | 343 | 9 | 351 | 1.55e-177 | 496 |
| Msa0343990 | AT5G17000.1 | 70.468 | 342 | 96 | 3 | 6 | 343 | 5 | 345 | 6.23e-177 | 494 |
| Msa0343990 | AT5G16990.1 | 69.501 | 341 | 100 | 4 | 6 | 343 | 4 | 343 | 1.35e-173 | 486 |
| Msa0343990 | AT1G26320.2 | 69.767 | 344 | 94 | 4 | 4 | 343 | 9 | 346 | 4.90e-173 | 484 |
| Msa0343990 | AT5G37980.1 | 66.181 | 343 | 110 | 3 | 6 | 343 | 12 | 353 | 5.92e-169 | 474 |
| Msa0343990 | AT5G37940.1 | 65.598 | 343 | 112 | 3 | 6 | 343 | 12 | 353 | 1.61e-167 | 471 |
| Msa0343990 | AT5G16960.2 | 66.087 | 345 | 112 | 3 | 1 | 341 | 1 | 344 | 2.14e-166 | 468 |
| Msa0343990 | AT5G16960.1 | 66.087 | 345 | 112 | 3 | 1 | 341 | 1 | 344 | 2.14e-166 | 468 |
| Msa0343990 | AT5G38000.1 | 64.035 | 342 | 117 | 3 | 6 | 342 | 12 | 352 | 2.78e-162 | 457 |
| Msa0343990 | AT5G38000.3 | 63.501 | 337 | 114 | 4 | 6 | 334 | 12 | 347 | 9.45e-157 | 443 |
| Msa0343990 | AT3G59845.1 | 64.348 | 345 | 113 | 6 | 4 | 341 | 5 | 346 | 1.51e-154 | 437 |
| Msa0343990 | AT5G38000.2 | 60.411 | 341 | 110 | 4 | 6 | 341 | 12 | 332 | 1.59e-146 | 417 |
| Msa0343990 | AT1G65560.1 | 58.841 | 345 | 136 | 5 | 4 | 343 | 7 | 350 | 6.07e-135 | 388 |
| Msa0343990 | AT5G16980.2 | 58.017 | 343 | 106 | 4 | 1 | 343 | 1 | 305 | 1.58e-133 | 383 |
| Msa0343990 | AT5G16980.1 | 75.664 | 226 | 55 | 0 | 118 | 343 | 14 | 239 | 4.74e-124 | 356 |
| Msa0343990 | AT5G16980.3 | 75.664 | 226 | 55 | 0 | 118 | 343 | 14 | 239 | 4.74e-124 | 356 |
| Msa0343990 | AT3G59845.2 | 71.020 | 245 | 69 | 2 | 98 | 341 | 1 | 244 | 5.18e-121 | 348 |
| Msa0343990 | AT1G65560.2 | 61.255 | 271 | 101 | 3 | 77 | 343 | 4 | 274 | 8.49e-113 | 329 |
| Msa0343990 | AT5G17000.2 | 69.725 | 218 | 61 | 3 | 6 | 219 | 5 | 221 | 9.89e-107 | 312 |
| Msa0343990 | AT1G49670.1 | 35.407 | 209 | 127 | 5 | 138 | 340 | 412 | 618 | 2.96e-25 | 107 |
| Msa0343990 | AT1G49670.2 | 35.468 | 203 | 123 | 5 | 144 | 340 | 441 | 641 | 5.21e-24 | 103 |
| Msa0343990 | AT5G37960.1 | 54.667 | 75 | 34 | 0 | 264 | 338 | 27 | 101 | 1.45e-18 | 80.5 |
Find 97 sgRNAs with CRISPR-Local
Find 696 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTCTTCTTTGTAGTTAA+AGG | 0.159741 | 3_1:+2548104 | None:intergenic |
| AACCATGCAATTTGGCAAAT+TGG | 0.212138 | 3_1:+2548480 | None:intergenic |
| TAGTTTGGGGAATGACTAAA+TGG | 0.237323 | 3_1:-2548801 | Msa0343990:CDS |
| ACCTGAAGGTGTCACAAATT+TGG | 0.261566 | 3_1:-2547626 | Msa0343990:CDS |
| TCATCTTCATACAAAATTCT+TGG | 0.266757 | 3_1:-2547548 | Msa0343990:CDS |
| CTTGTGCATGGAGCACTCTT+TGG | 0.275860 | 3_1:-2547303 | Msa0343990:three_prime_UTR |
| AAAACTGTCTCTCCTTTCTT+AGG | 0.278383 | 3_1:+2548542 | None:intergenic |
| AAGTAAATGTCGATGCCTTC+TGG | 0.282317 | 3_1:+2547751 | None:intergenic |
| AAATCATCTTTCTTATAATC+TGG | 0.299191 | 3_1:+2548823 | None:intergenic |
| TTTCTCACTTGTGCCATGTT+TGG | 0.306479 | 3_1:+2556212 | None:intergenic |
| TAAGAAAGATGATTTAGTTT+GGG | 0.308474 | 3_1:-2548815 | Msa0343990:CDS |
| GCCAAATTTGTGACACCTTC+AGG | 0.309515 | 3_1:+2547625 | None:intergenic |
| ATAAGAAAGATGATTTAGTT+TGG | 0.311139 | 3_1:-2548816 | Msa0343990:CDS |
| AACATAGCAACCATGCAATT+TGG | 0.315125 | 3_1:+2548472 | None:intergenic |
| TTGAAAAGTATTTCAGTTGC+AGG | 0.321684 | 3_1:+2548760 | None:intergenic |
| TGAGAATGGCCCTGCAGCTT+TGG | 0.335929 | 3_1:-2547461 | Msa0343990:CDS |
| GGTGCTGTTGGTCAACTTGT+TGG | 0.364308 | 3_1:-2548503 | Msa0343990:CDS |
| AGCACTCTTTGGATGACCTT+TGG | 0.368252 | 3_1:-2547292 | Msa0343990:three_prime_UTR |
| TGCTATGTTGTTGGAAGTGC+TGG | 0.374726 | 3_1:-2548458 | Msa0343990:CDS |
| CAATAGTGTCCTTGGCCATC+AGG | 0.381937 | 3_1:+2556033 | None:intergenic |
| TTGCAGCCATTGACAGGATT+AGG | 0.387244 | 3_1:-2548874 | Msa0343990:intron |
| GTCCCGCTTTCCTACTATAC+TGG | 0.392986 | 3_1:-2548721 | Msa0343990:CDS |
| ACTTGTGCCATGTTTGGAAT+TGG | 0.395712 | 3_1:+2556218 | None:intergenic |
| GTGTCTAAAGTTGTAGAATC+TGG | 0.408050 | 3_1:-2548850 | Msa0343990:CDS |
| TTTGAGCAGAACTACATCAT+TGG | 0.414334 | 3_1:+2556091 | None:intergenic |
| TCCTACTATACTGGAATTCT+CGG | 0.415079 | 3_1:-2548712 | Msa0343990:intron |
| GCTTTGGTTGGTCTGTTTAG+TGG | 0.421611 | 3_1:-2547445 | Msa0343990:CDS |
| GGACTTGGTGGTCTCACCCC+TGG | 0.422269 | 3_1:-2556008 | Msa0343990:CDS |
| ATATCATATATAAGCGGATT+CGG | 0.434543 | 3_1:-2547600 | Msa0343990:CDS |
| CCAGCATAAGCAGTCATTCC+CGG | 0.444732 | 3_1:+2548584 | None:intergenic |
| TATGCTGGTTTCTTTGAAGT+AGG | 0.445138 | 3_1:-2548569 | Msa0343990:CDS |
| ATGGCCAAGGACACTATTGC+AGG | 0.448653 | 3_1:-2556029 | Msa0343990:CDS |
| ACGTTCATGTCTGATTCTAT+AGG | 0.452868 | 3_1:+2556152 | None:intergenic |
| GAGTAATTGCAGCCATTGAC+AGG | 0.454761 | 3_1:-2548880 | Msa0343990:intron |
| AGAAGGAAAGGTTGTGTATG+TGG | 0.461025 | 3_1:-2547503 | Msa0343990:CDS |
| AATGGCCCTGCAGCTTTGGT+TGG | 0.462636 | 3_1:-2547457 | Msa0343990:CDS |
| AAGAATGAATGGAAATGCTT+TGG | 0.465798 | 3_1:-2547379 | Msa0343990:three_prime_UTR |
| TCATCTGCCTCTGGTGCTGT+TGG | 0.469392 | 3_1:-2548515 | Msa0343990:CDS |
| TAAATGGGAAGAGTATAGTT+TGG | 0.470092 | 3_1:-2548785 | Msa0343990:CDS |
| ACCTCGATGCAGCTTTGAAA+AGG | 0.476543 | 3_1:-2548080 | Msa0343990:intron |
| TTGCATGGTTGCTATGTTGT+TGG | 0.478375 | 3_1:-2548467 | Msa0343990:CDS |
| TTGTTTGAGTACAGGTATGC+CGG | 0.481096 | 3_1:-2548603 | Msa0343990:intron |
| CTCATGAGTGAAAGAATGAA+TGG | 0.483174 | 3_1:-2547390 | Msa0343990:exon |
| TGTGTTTAGTTACTTGTGCA+TGG | 0.483214 | 3_1:-2547315 | Msa0343990:three_prime_UTR |
| GACACTATTGCAGGACTTGG+TGG | 0.484411 | 3_1:-2556020 | Msa0343990:CDS |
| AACAGACCAACCAAAGCTGC+AGG | 0.494837 | 3_1:+2547451 | None:intergenic |
| GATAATTACAATCAACAGAA+TGG | 0.498171 | 3_1:+2547257 | None:intergenic |
| ACCGAGAATTCCAGTATAGT+AGG | 0.503877 | 3_1:+2548711 | None:intergenic |
| CCGGGAATGACTGCTTATGC+TGG | 0.504351 | 3_1:-2548584 | Msa0343990:CDS |
| AAGTCCTGCAATAGTGTCCT+TGG | 0.515317 | 3_1:+2556025 | None:intergenic |
| CAAGAGTTGGTTGAGTCGTG+TGG | 0.516337 | 3_1:+2556305 | None:intergenic |
| AAGAAAGATGATTTAGTTTG+GGG | 0.523463 | 3_1:-2548814 | Msa0343990:CDS |
| GTCTCTTATAAGAGAAGGAA+AGG | 0.527141 | 3_1:-2547515 | Msa0343990:CDS |
| CTGTTTAGTGGTCAAAATGT+TGG | 0.532048 | 3_1:-2547433 | Msa0343990:CDS |
| ATAGCTGAGGGTCTTGAGAA+TGG | 0.533886 | 3_1:-2547475 | Msa0343990:CDS |
| GCCATCAGGATTCTCAGATA+AGG | 0.534182 | 3_1:+2556047 | None:intergenic |
| CTCTTGAATATGAAACTCCA+TGG | 0.534749 | 3_1:-2547694 | Msa0343990:CDS |
| GAAGTAGGCTCTCCTAAGAA+AGG | 0.539150 | 3_1:-2548554 | Msa0343990:CDS |
| AGAAAAGTGATTAATGAAGA+AGG | 0.540197 | 3_1:+2556263 | None:intergenic |
| TGAAAAGTATTTCAGTTGCA+GGG | 0.540772 | 3_1:+2548761 | None:intergenic |
| GACATTTACTTTGAGAACGT+TGG | 0.545762 | 3_1:-2547739 | Msa0343990:CDS |
| TTCCAGTATAGTAGGAAAGC+GGG | 0.546840 | 3_1:+2548719 | None:intergenic |
| GACACTCCTAATCCTGTCAA+TGG | 0.548059 | 3_1:+2548868 | None:intergenic |
| GTATTGTCTCTTATAAGAGA+AGG | 0.553750 | 3_1:-2547520 | Msa0343990:CDS |
| AGTTTGGGGAATGACTAAAT+GGG | 0.554508 | 3_1:-2548800 | Msa0343990:CDS |
| CACACACAGGTATGCGCCCA+TGG | 0.561199 | 3_1:+2547677 | None:intergenic |
| ATTTACTTTGAGAACGTTGG+AGG | 0.562529 | 3_1:-2547736 | Msa0343990:CDS |
| TGTTTGAGTACAGGTATGCC+GGG | 0.570748 | 3_1:-2548602 | Msa0343990:intron |
| GGCCAATTTGCCAAATTGCA+TGG | 0.571871 | 3_1:-2548482 | Msa0343990:CDS |
| TCTGAGAATCCTGATGGCCA+AGG | 0.573459 | 3_1:-2556042 | Msa0343990:CDS |
| CATATATAAGCGGATTCGGA+TGG | 0.577990 | 3_1:-2547596 | Msa0343990:CDS |
| AACTAAACCAATTCCAAACA+TGG | 0.579023 | 3_1:-2556225 | Msa0343990:exon |
| AAGGACACTATTGCAGGACT+TGG | 0.579832 | 3_1:-2556023 | Msa0343990:CDS |
| GATTCTCAGATAAGGATCAC+AGG | 0.585432 | 3_1:+2556055 | None:intergenic |
| AAGAGTTGGTTGAGTCGTGT+GGG | 0.588083 | 3_1:+2556306 | None:intergenic |
| AATCAACAGAATGGATGAAG+AGG | 0.597589 | 3_1:+2547266 | None:intergenic |
| TATAAGCGGATTCGGATGGA+AGG | 0.599880 | 3_1:-2547592 | Msa0343990:CDS |
| GACACAAATGTGTCAAGAGT+TGG | 0.600184 | 3_1:+2556292 | None:intergenic |
| ATAGCATGACATACAGAACC+AGG | 0.609222 | 3_1:+2555990 | None:intergenic |
| AAGTGCTGGAAGTAAAGAGA+AGG | 0.616160 | 3_1:-2548444 | Msa0343990:intron |
| TCCTTATCTGAGAATCCTGA+TGG | 0.619794 | 3_1:-2556048 | Msa0343990:CDS |
| TAAACTAGATACTTTCCAGA+AGG | 0.622571 | 3_1:-2547766 | Msa0343990:intron |
| ACTACATCATTGGAACCTTG+TGG | 0.625916 | 3_1:+2556101 | None:intergenic |
| TCTTGAATATGAAACTCCAT+GGG | 0.636007 | 3_1:-2547693 | Msa0343990:CDS |
| AAGTTGACCAACAGCACCAG+AGG | 0.637825 | 3_1:+2548508 | None:intergenic |
| ATTCCAGTATAGTAGGAAAG+CGG | 0.640802 | 3_1:+2548718 | None:intergenic |
| TGGCACATATCATATATAAG+CGG | 0.642495 | 3_1:-2547606 | Msa0343990:CDS |
| ATTACTCTCAAGCTTCCACA+AGG | 0.648436 | 3_1:-2556116 | Msa0343990:CDS |
| TACAATCTTACTCAACCTGA+AGG | 0.650544 | 3_1:-2547640 | Msa0343990:CDS |
| ATGGATGAAGAGGTTTCCAA+AGG | 0.665861 | 3_1:+2547276 | None:intergenic |
| ACAGACCAACCAAAGCTGCA+GGG | 0.668442 | 3_1:+2547452 | None:intergenic |
| CATGGGCGCATACCTGTGTG+TGG | 0.680594 | 3_1:-2547676 | Msa0343990:CDS |
| AGCATGACATACAGAACCAG+GGG | 0.683293 | 3_1:+2555992 | None:intergenic |
| TGTGAGATCATTCCACACAC+AGG | 0.692179 | 3_1:+2547664 | None:intergenic |
| TAGCATGACATACAGAACCA+GGG | 0.696996 | 3_1:+2555991 | None:intergenic |
| GTATGTGGAAGACATAGCTG+AGG | 0.744288 | 3_1:-2547488 | Msa0343990:CDS |
| TATGTGGAAGACATAGCTGA+GGG | 0.752621 | 3_1:-2547487 | Msa0343990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAATTATAATATTTTT+TGG | + | chr3_1:2553917-2553936 | None:intergenic | 0.0% |
| !! | ATTATGTATAAAATTTACTT+TGG | - | chr3_1:2545141-2545160 | Msa0343990:intron | 10.0% |
| !! | TTATGTATAAAATTTACTTT+GGG | - | chr3_1:2545142-2545161 | Msa0343990:intron | 10.0% |
| !! | TGAAAATAAAAAAAGTTATT+TGG | + | chr3_1:2545516-2545535 | None:intergenic | 10.0% |
| !! | TGAAAATAAAAAAAGTTATT+TGG | + | chr3_1:2545516-2545535 | None:intergenic | 10.0% |
| !! | ATTTAGTTGAAAAATAAAAA+TGG | - | chr3_1:2553814-2553833 | Msa0343990:intron | 10.0% |
| !!! | AAGTTTAAATTTTTTAACAA+TGG | + | chr3_1:2554007-2554026 | None:intergenic | 10.0% |
| !! | TAAAAGTTGAAATTAAATTA+AGG | - | chr3_1:2554176-2554195 | Msa0343990:intron | 10.0% |
| !!! | AAAAATACTATTTTCAATTT+TGG | - | chr3_1:2555334-2555353 | Msa0343990:intron | 10.0% |
| !! | AATTGAATTTAACATTTCAA+AGG | - | chr3_1:2545095-2545114 | Msa0343990:intron | 15.0% |
| !!! | ATACTTTGTCTTTTAAAATT+AGG | + | chr3_1:2545121-2545140 | None:intergenic | 15.0% |
| !!! | TCTTAATAAGAAATTTTACA+TGG | - | chr3_1:2545835-2545854 | Msa0343990:intron | 15.0% |
| !! | TATGAATTATTAGAATAAGT+TGG | + | chr3_1:2546772-2546791 | None:intergenic | 15.0% |
| !!! | ATATATGATTTTGATACATT+AGG | + | chr3_1:2547306-2547325 | None:intergenic | 15.0% |
| !! | ATCATATATTATCATTCTAA+AGG | - | chr3_1:2547317-2547336 | Msa0343990:three_prime_UTR | 15.0% |
| !!! | AATAAATTTCTAAAATTTCG+AGG | + | chr3_1:2548087-2548106 | None:intergenic | 15.0% |
| !!! | TCTTAATAAGAAATTTTACA+TGG | - | chr3_1:2545835-2545854 | Msa0343990:intron | 15.0% |
| !! | TATGAATTATTAGAATAAGT+TGG | + | chr3_1:2546772-2546791 | None:intergenic | 15.0% |
| !!! | ATATATGATTTTGATACATT+AGG | + | chr3_1:2547306-2547325 | None:intergenic | 15.0% |
| !! | ATCATATATTATCATTCTAA+AGG | - | chr3_1:2547317-2547336 | Msa0343990:three_prime_UTR | 15.0% |
| !!! | TTTTTTTTTGTTTGTAAACT+TGG | + | chr3_1:2551524-2551543 | None:intergenic | 15.0% |
| !! | TATTCATTTAGTATAATTAC+AGG | + | chr3_1:2552793-2552812 | None:intergenic | 15.0% |
| !!! | GATTTGTTGAAAAATAAATT+TGG | - | chr3_1:2552833-2552852 | Msa0343990:intron | 15.0% |
| !!! | CTATGAATTTTCATTTTTTT+GGG | + | chr3_1:2553975-2553994 | None:intergenic | 15.0% |
| !!! | ACTATGAATTTTCATTTTTT+TGG | + | chr3_1:2553976-2553995 | None:intergenic | 15.0% |
| !!! | AAAAATTTAAACTTTTGCAA+AGG | - | chr3_1:2554013-2554032 | Msa0343990:intron | 15.0% |
| !!! | TCGAAATTTTGAATTATTTT+CGG | + | chr3_1:2554068-2554087 | None:intergenic | 15.0% |
| !!! | TAAAAAACTTCTTCAATTTT+TGG | + | chr3_1:2554143-2554162 | None:intergenic | 15.0% |
| !!! | AAAATTGAAGAAGTTTTTTA+AGG | - | chr3_1:2554143-2554162 | Msa0343990:intron | 15.0% |
| !!! | AAATTGAAGAAGTTTTTTAA+GGG | - | chr3_1:2554144-2554163 | Msa0343990:intron | 15.0% |
| !!! | ATTAAATTAAGGAACAATTT+TGG | - | chr3_1:2554187-2554206 | Msa0343990:intron | 15.0% |
| !!! | AAAATCATAGGTTTTTTTTA+GGG | + | chr3_1:2555208-2555227 | None:intergenic | 15.0% |
| !!! | AAAAATCATAGGTTTTTTTT+AGG | + | chr3_1:2555209-2555228 | None:intergenic | 15.0% |
| !! | GATATCAATTTATGTAAATT+AGG | - | chr3_1:2555762-2555781 | Msa0343990:intron | 15.0% |
| !! | AAAAACTTGAAAGAAAAAAA+AGG | + | chr3_1:2556205-2556224 | None:intergenic | 15.0% |
| !!! | ATTTTGAATCAATATCATTG+AGG | + | chr3_1:2545629-2545648 | None:intergenic | 20.0% |
| !! | TAAAAAAAAAAACACTTCGA+AGG | - | chr3_1:2545663-2545682 | Msa0343990:intron | 20.0% |
| !!! | AAGAACTTTTGGAATTATTA+TGG | + | chr3_1:2545714-2545733 | None:intergenic | 20.0% |
| !! | TGATATGATATATTATGAGT+CGG | + | chr3_1:2545799-2545818 | None:intergenic | 20.0% |
| !! | AAAATAAAATTATGGAACCA+AGG | + | chr3_1:2546047-2546066 | None:intergenic | 20.0% |
| !! | AGAGAGCAAAAATAAAATTA+TGG | + | chr3_1:2546055-2546074 | None:intergenic | 20.0% |
| !!! | ATGAACATAAAAGAGATTTT+TGG | - | chr3_1:2546639-2546658 | Msa0343990:intron | 20.0% |
| !!! | AGAATGATTATTTCTGAATT+AGG | + | chr3_1:2546682-2546701 | None:intergenic | 20.0% |
| !!! | AGATAATTTAAGAACTTGTT+TGG | + | chr3_1:2546827-2546846 | None:intergenic | 20.0% |
| !! | GGATGATTAGTAATAAAAAA+AGG | + | chr3_1:2546876-2546895 | None:intergenic | 20.0% |
| !! | TAATGTGTTCAAAATGTTAT+GGG | + | chr3_1:2547510-2547529 | None:intergenic | 20.0% |
| !! | TTAATGTGTTCAAAATGTTA+TGG | + | chr3_1:2547511-2547530 | None:intergenic | 20.0% |
| !!! | TAGAGTAAAAATTGATGATT+TGG | - | chr3_1:2547696-2547715 | Msa0343990:CDS | 20.0% |
| !!! | TTTTTGAATCAAGGTTAAAA+TGG | + | chr3_1:2548017-2548036 | None:intergenic | 20.0% |
| !!! | TGAGATTTTTTTTTGAATCA+AGG | + | chr3_1:2548026-2548045 | None:intergenic | 20.0% |
| !! | TGATTCAAAAAAAAATCTCA+TGG | - | chr3_1:2548026-2548045 | Msa0343990:intron | 20.0% |
| !! | GATTCAAAAAAAAATCTCAT+GGG | - | chr3_1:2548027-2548046 | Msa0343990:intron | 20.0% |
| !! | ACAAGAAAAGTAAGAAATTT+AGG | + | chr3_1:2548311-2548330 | None:intergenic | 20.0% |
| !!! | AGATGAATTTTTTTCAAGAA+GGG | + | chr3_1:2548398-2548417 | None:intergenic | 20.0% |
| !!! | AAGATGAATTTTTTTCAAGA+AGG | + | chr3_1:2548399-2548418 | None:intergenic | 20.0% |
| !! | TTAAAATAGGATTTACATCT+TGG | + | chr3_1:2548840-2548859 | None:intergenic | 20.0% |
| !!! | ATAGAACAGGTTTTTAAAAT+AGG | + | chr3_1:2548853-2548872 | None:intergenic | 20.0% |
| !!! | ATTTTGAATCAATATCATTG+AGG | + | chr3_1:2545629-2545648 | None:intergenic | 20.0% |
| !! | TAAAAAAAAAAACACTTCGA+AGG | - | chr3_1:2545663-2545682 | Msa0343990:intron | 20.0% |
| !!! | AAGAACTTTTGGAATTATTA+TGG | + | chr3_1:2545714-2545733 | None:intergenic | 20.0% |
| !! | TGATATGATATATTATGAGT+CGG | + | chr3_1:2545799-2545818 | None:intergenic | 20.0% |
| !! | AAAATAAAATTATGGAACCA+AGG | + | chr3_1:2546047-2546066 | None:intergenic | 20.0% |
| !! | AGAGAGCAAAAATAAAATTA+TGG | + | chr3_1:2546055-2546074 | None:intergenic | 20.0% |
| !!! | ATGAACATAAAAGAGATTTT+TGG | - | chr3_1:2546639-2546658 | Msa0343990:intron | 20.0% |
| !!! | AGAATGATTATTTCTGAATT+AGG | + | chr3_1:2546682-2546701 | None:intergenic | 20.0% |
| !!! | AGATAATTTAAGAACTTGTT+TGG | + | chr3_1:2546827-2546846 | None:intergenic | 20.0% |
| !! | TGGATGATTAGTAATAAAAA+AGG | + | chr3_1:2546877-2546896 | None:intergenic | 20.0% |
| !! | TAATGTGTTCAAAATGTTAT+GGG | + | chr3_1:2547510-2547529 | None:intergenic | 20.0% |
| !! | TTAATGTGTTCAAAATGTTA+TGG | + | chr3_1:2547511-2547530 | None:intergenic | 20.0% |
| !!! | TAGAGTAAAAATTGATGATT+TGG | - | chr3_1:2547696-2547715 | Msa0343990:CDS | 20.0% |
| !!! | TTTTTGAATCAAGGTTAAAA+TGG | + | chr3_1:2548017-2548036 | None:intergenic | 20.0% |
| !!! | TGAGATTTTTTTTTGAATCA+AGG | + | chr3_1:2548026-2548045 | None:intergenic | 20.0% |
| !! | TGATTCAAAAAAAAATCTCA+TGG | - | chr3_1:2548026-2548045 | Msa0343990:intron | 20.0% |
| !! | GATTCAAAAAAAAATCTCAT+GGG | - | chr3_1:2548027-2548046 | Msa0343990:intron | 20.0% |
| !! | AATATCAAGGCTATAAATAA+TGG | - | chr3_1:2551813-2551832 | Msa0343990:intron | 20.0% |
| !! | AAAGTTAGTTATAATGTGTA+TGG | + | chr3_1:2551966-2551985 | None:intergenic | 20.0% |
| !! | CATTATAGTTACTTAGTTTA+TGG | + | chr3_1:2552008-2552027 | None:intergenic | 20.0% |
| !! | AAGTAACTATAATGAAGTTA+TGG | - | chr3_1:2552014-2552033 | Msa0343990:intron | 20.0% |
| !! | AAATCATCTTTCTTATAATC+TGG | + | chr3_1:2552151-2552170 | None:intergenic | 20.0% |
| !! | ATAAGAAAGATGATTTAGTT+TGG | - | chr3_1:2552155-2552174 | Msa0343990:intron | 20.0% |
| !!! | TAAGAAAGATGATTTAGTTT+GGG | - | chr3_1:2552156-2552175 | Msa0343990:intron | 20.0% |
| !! | ACATTTGATTAATCATTCTA+CGG | - | chr3_1:2552622-2552641 | Msa0343990:intron | 20.0% |
| !!! | CTATTTTAAATTTTGGAAAC+CGG | - | chr3_1:2552747-2552766 | Msa0343990:intron | 20.0% |
| !! | TTAGTATAATTACAGGATAA+TGG | + | chr3_1:2552786-2552805 | None:intergenic | 20.0% |
| !! | CATACACACAAATAATAATT+TGG | + | chr3_1:2553104-2553123 | None:intergenic | 20.0% |
| !! | ATTATTATTTGTGTGTATGT+AGG | - | chr3_1:2553105-2553124 | Msa0343990:intron | 20.0% |
| !!! | AATTGAAGAAGTTTTTTAAG+GGG | - | chr3_1:2554145-2554164 | Msa0343990:intron | 20.0% |
| !! | AAATCATCTTTCTTATAATC+TGG | + | chr3_1:2552151-2552170 | None:intergenic | 20.0% |
| !! | ATAAGAAAGATGATTTAGTT+TGG | - | chr3_1:2552155-2552174 | Msa0343990:intron | 20.0% |
| !!! | TGATAATTCATCATTTTTAC+AGG | + | chr3_1:2555180-2555199 | None:intergenic | 20.0% |
| !!! | AAATCATAGGTTTTTTTTAG+GGG | + | chr3_1:2555207-2555226 | None:intergenic | 20.0% |
| !! | ACAGTAGAATAAAAAATCAT+AGG | + | chr3_1:2555220-2555239 | None:intergenic | 20.0% |
| !!! | GTCTGTTATTAACATTTTTA+TGG | - | chr3_1:2555479-2555498 | Msa0343990:intron | 20.0% |
| ! | AGAAAAGTGATTAATGAAGA+AGG | + | chr3_1:2544711-2544730 | None:intergenic | 25.0% |
| !!! | TTGTTGTTGCTTTTGAAATT+AGG | - | chr3_1:2545055-2545074 | Msa0343990:intron | 25.0% |
| !! | AGTTGTCAAGTTTGTTTAAT+AGG | + | chr3_1:2545384-2545403 | None:intergenic | 25.0% |
| ! | TTAAAACAGGATTTACATCT+TGG | + | chr3_1:2545468-2545487 | None:intergenic | 25.0% |
| !!! | ATAGAACAGGTTTTTAAAAC+AGG | + | chr3_1:2545481-2545500 | None:intergenic | 25.0% |
| ! | AAAAAGTTATTTGGAGATTC+TGG | + | chr3_1:2545507-2545526 | None:intergenic | 25.0% |
| ! | CGAAGGAAAAATTAAACTAA+AGG | - | chr3_1:2545680-2545699 | Msa0343990:intron | 25.0% |
| ! | ATGTTAATTTCTCGATAAGA+TGG | + | chr3_1:2545878-2545897 | None:intergenic | 25.0% |
| ! | TGCTAAATTAGTATTCATGT+TGG | - | chr3_1:2546003-2546022 | Msa0343990:intron | 25.0% |
| ! | TAAATTAGTATTCATGTTGG+AGG | - | chr3_1:2546006-2546025 | Msa0343990:intron | 25.0% |
| ! | AAATTAGTATTCATGTTGGA+GGG | - | chr3_1:2546007-2546026 | Msa0343990:intron | 25.0% |
| ! | ATTTGAAAATCGCAAAGAAA+TGG | + | chr3_1:2546492-2546511 | None:intergenic | 25.0% |
| ! | GTTTATGCTAGTATAAATGT+TGG | + | chr3_1:2546613-2546632 | None:intergenic | 25.0% |
| !!! | GATTTTTGGATACACTAATA+AGG | - | chr3_1:2546653-2546672 | Msa0343990:intron | 25.0% |
| ! | TGACTATTATGTCATATGAA+TGG | + | chr3_1:2546736-2546755 | None:intergenic | 25.0% |
| !! | TTTAAGAACTTGTTTGGAAT+TGG | + | chr3_1:2546821-2546840 | None:intergenic | 25.0% |
| !! | CATGGATTTAAAGAAGTATA+TGG | + | chr3_1:2546897-2546916 | None:intergenic | 25.0% |
| ! | ATAGGACATTATACACATTT+CGG | - | chr3_1:2546999-2547018 | Msa0343990:intron | 25.0% |
| !! | GAAGCTTTTATGGAAATAAA+TGG | + | chr3_1:2547072-2547091 | None:intergenic | 25.0% |
| !! | TAGTGTAAATGAAGCTTTTA+TGG | + | chr3_1:2547082-2547101 | None:intergenic | 25.0% |
| ! | CATGTTAAATATGTTTATGG+TGG | + | chr3_1:2547220-2547239 | None:intergenic | 25.0% |
| ! | GCTCATGTTAAATATGTTTA+TGG | + | chr3_1:2547223-2547242 | None:intergenic | 25.0% |
| ! | ATTAGCGATGATATAACATT+AGG | + | chr3_1:2547278-2547297 | None:intergenic | 25.0% |
| ! | GCATAATTAAAATACCCAAA+GGG | - | chr3_1:2547339-2547358 | Msa0343990:three_prime_UTR | 25.0% |
| !! | TTAACATGTTTGATGATTGT+AGG | + | chr3_1:2547477-2547496 | None:intergenic | 25.0% |
| ! | ATTGAAATCATTTGGAAGTA+AGG | + | chr3_1:2547671-2547690 | None:intergenic | 25.0% |
| ! | CTAACTTCATTGAAATCATT+TGG | + | chr3_1:2547679-2547698 | None:intergenic | 25.0% |
| !! | GATGATTTGGAAATTTAGAA+AGG | - | chr3_1:2547709-2547728 | Msa0343990:CDS | 25.0% |
| ! | ATTTGGAAATTTAGAAAGGA+AGG | - | chr3_1:2547713-2547732 | Msa0343990:CDS | 25.0% |
| ! | TTTGGAAATTTAGAAAGGAA+GGG | - | chr3_1:2547714-2547733 | Msa0343990:CDS | 25.0% |
| ! | GTAAAGAAAAGAAATTGTGT+TGG | - | chr3_1:2547911-2547930 | Msa0343990:intron | 25.0% |
| ! | TACACTCAAATATCTCTAAA+TGG | - | chr3_1:2547983-2548002 | Msa0343990:intron | 25.0% |
| ! | CAGAAAGAATTAGTTAGTAA+TGG | + | chr3_1:2548166-2548185 | None:intergenic | 25.0% |
| ! | ATAAATTGTTATGGGTAAGA+CGG | + | chr3_1:2548373-2548392 | None:intergenic | 25.0% |
| ! | GAAGGGATATAAATTGTTAT+GGG | + | chr3_1:2548381-2548400 | None:intergenic | 25.0% |
| ! | AGAAGGGATATAAATTGTTA+TGG | + | chr3_1:2548382-2548401 | None:intergenic | 25.0% |
| !! | GCTTACAATGAATTTTGTTA+AGG | + | chr3_1:2548457-2548476 | None:intergenic | 25.0% |
| !! | TGACATTTGGAATAAATATC+TGG | - | chr3_1:2548588-2548607 | Msa0343990:CDS | 25.0% |
| !! | AGTTGTCAAGTTTGTTTAAT+AGG | + | chr3_1:2545384-2545403 | None:intergenic | 25.0% |
| ! | AAAAAGTTATTTGGAGATTC+TGG | + | chr3_1:2545507-2545526 | None:intergenic | 25.0% |
| ! | CGAAGGAAAAATTAAACTAA+AGG | - | chr3_1:2545680-2545699 | Msa0343990:intron | 25.0% |
| ! | ATGTTAATTTCTCGATAAGA+TGG | + | chr3_1:2545878-2545897 | None:intergenic | 25.0% |
| ! | TGCTAAATTAGTATTCATGT+TGG | - | chr3_1:2546003-2546022 | Msa0343990:intron | 25.0% |
| ! | TAAATTAGTATTCATGTTGG+AGG | - | chr3_1:2546006-2546025 | Msa0343990:intron | 25.0% |
| ! | AAATTAGTATTCATGTTGGA+GGG | - | chr3_1:2546007-2546026 | Msa0343990:intron | 25.0% |
| ! | ATTTGAAAATCGCAAAGAAA+TGG | + | chr3_1:2546492-2546511 | None:intergenic | 25.0% |
| ! | GTTTATGCTAGTATAAATGT+TGG | + | chr3_1:2546613-2546632 | None:intergenic | 25.0% |
| !!! | GATTTTTGGATACACTAATA+AGG | - | chr3_1:2546653-2546672 | Msa0343990:intron | 25.0% |
| ! | TGACTATTATGTCATATGAA+TGG | + | chr3_1:2546736-2546755 | None:intergenic | 25.0% |
| !! | TTTAAGAACTTGTTTGGAAT+TGG | + | chr3_1:2546821-2546840 | None:intergenic | 25.0% |
| !! | CATGGATTTAAAGAAGTATA+TGG | + | chr3_1:2546897-2546916 | None:intergenic | 25.0% |
| ! | ATAGGACATTATACACATTT+CGG | - | chr3_1:2546999-2547018 | Msa0343990:intron | 25.0% |
| !! | GAAGCTTTTATGGAAATAAA+TGG | + | chr3_1:2547072-2547091 | None:intergenic | 25.0% |
| !! | TAGTGTAAATGAAGCTTTTA+TGG | + | chr3_1:2547082-2547101 | None:intergenic | 25.0% |
| ! | CATGTTAAATATGTTTATGG+TGG | + | chr3_1:2547220-2547239 | None:intergenic | 25.0% |
| ! | GCTCATGTTAAATATGTTTA+TGG | + | chr3_1:2547223-2547242 | None:intergenic | 25.0% |
| ! | ATTAGCGATGATATAACATT+AGG | + | chr3_1:2547278-2547297 | None:intergenic | 25.0% |
| ! | GCATAATTAAAATACCCAAA+GGG | - | chr3_1:2547339-2547358 | Msa0343990:three_prime_UTR | 25.0% |
| !! | TTAACATGTTTGATGATTGT+AGG | + | chr3_1:2547477-2547496 | None:intergenic | 25.0% |
| ! | ATTGAAATCATTTGGAAGTA+AGG | + | chr3_1:2547671-2547690 | None:intergenic | 25.0% |
| ! | CTAACTTCATTGAAATCATT+TGG | + | chr3_1:2547679-2547698 | None:intergenic | 25.0% |
| !! | GATGATTTGGAAATTTAGAA+AGG | - | chr3_1:2547709-2547728 | Msa0343990:CDS | 25.0% |
| ! | ATTTGGAAATTTAGAAAGGA+AGG | - | chr3_1:2547713-2547732 | Msa0343990:CDS | 25.0% |
| ! | TTTGGAAATTTAGAAAGGAA+GGG | - | chr3_1:2547714-2547733 | Msa0343990:CDS | 25.0% |
| ! | GTAAAGAAAAGAAATTGTGT+TGG | - | chr3_1:2547911-2547930 | Msa0343990:intron | 25.0% |
| ! | TACACTCAAATATCTCTAAA+TGG | - | chr3_1:2547983-2548002 | Msa0343990:intron | 25.0% |
| ! | TGTAATCTGTTTAGAGAAAA+TGG | + | chr3_1:2551570-2551589 | None:intergenic | 25.0% |
| ! | ATTATTTAATGACCCAAGAA+AGG | - | chr3_1:2551655-2551674 | Msa0343990:intron | 25.0% |
| ! | ATCATAATCTTTACCTACTT+GGG | + | chr3_1:2551699-2551718 | None:intergenic | 25.0% |
| ! | AGTTGCATTAGATAATATAG+AGG | - | chr3_1:2551724-2551743 | Msa0343990:intron | 25.0% |
| !! | AAGGAGAAATTACTCTAAAA+AGG | + | chr3_1:2551917-2551936 | None:intergenic | 25.0% |
| !!! | AAGAAAGATGATTTAGTTTG+GGG | - | chr3_1:2552157-2552176 | Msa0343990:intron | 25.0% |
| ! | TGTTAATTCATCATTTATGC+AGG | + | chr3_1:2552599-2552618 | None:intergenic | 25.0% |
| ! | TAATGGTTGTAATTATGTAC+CGG | + | chr3_1:2552769-2552788 | None:intergenic | 25.0% |
| ! | TTTCTCTTCTTTGTAGTTAA+AGG | + | chr3_1:2552870-2552889 | None:intergenic | 25.0% |
| ! | CTTCATAGATAGTTATTACT+TGG | - | chr3_1:2553141-2553160 | Msa0343990:intron | 25.0% |
| !! | ATATCATATATAAGCGGATT+CGG | - | chr3_1:2553371-2553390 | Msa0343990:intron | 25.0% |
| ! | TCATCTTCATACAAAATTCT+TGG | - | chr3_1:2553423-2553442 | Msa0343990:intron | 25.0% |
| ! | GATAATTACAATCAACAGAA+TGG | + | chr3_1:2553717-2553736 | None:intergenic | 25.0% |
| !! | ATAAATTGACTTAAAAGCAG+TGG | - | chr3_1:2554096-2554115 | Msa0343990:intron | 25.0% |
| !! | TGGTGATATTAAACTTTTGA+GGG | - | chr3_1:2554116-2554135 | Msa0343990:intron | 25.0% |
| ! | TGTCAAAAAACACAACAAAA+TGG | + | chr3_1:2554935-2554954 | None:intergenic | 25.0% |
| !!! | TAAACATTCTCTCCTTTTTT+AGG | + | chr3_1:2555031-2555050 | None:intergenic | 25.0% |
| ! | GAATCATCTTTCTTATAATC+TGG | - | chr3_1:2555365-2555384 | Msa0343990:intron | 25.0% |
| ! | GATCTCTTGAAGAATAAATT+TGG | - | chr3_1:2555399-2555418 | Msa0343990:intron | 25.0% |
| !! | ACATATACTTTGAGAATGTT+GGG | - | chr3_1:2555804-2555823 | Msa0343990:intron | 25.0% |
| ! | TCACCTTTATACAAAATTCT+TGG | - | chr3_1:2555994-2556013 | Msa0343990:intron | 25.0% |
| !! | ACTCCAAGAATTTTGTATAA+AGG | + | chr3_1:2556000-2556019 | None:intergenic | 25.0% |
| AACTAAACCAATTCCAAACA+TGG | - | chr3_1:2544746-2544765 | Msa0343990:intron | 30.0% | |
| ! | CATTCATGAATAGTTTGTCT+TGG | - | chr3_1:2545020-2545039 | Msa0343990:intron | 30.0% |
| !! | TAGTTTGTCTTGGATTTTGA+AGG | - | chr3_1:2545030-2545049 | Msa0343990:intron | 30.0% |
| !!! | TTGCTTTTGAAATTAGGAAG+TGG | - | chr3_1:2545061-2545080 | Msa0343990:intron | 30.0% |
| !!! | TGCTTTTGAAATTAGGAAGT+GGG | - | chr3_1:2545062-2545081 | Msa0343990:intron | 30.0% |
| GCAATAATGTTTGATTAGTG+TGG | + | chr3_1:2545202-2545221 | None:intergenic | 30.0% | |
| TGGAAATGTTGAAAATACAG+AGG | + | chr3_1:2545448-2545467 | None:intergenic | 30.0% | |
| AATATCATTGAGGCTGAAAT+AGG | + | chr3_1:2545619-2545638 | None:intergenic | 30.0% | |
| ! | CTAGATCAAGTAAGAACTTT+TGG | + | chr3_1:2545725-2545744 | None:intergenic | 30.0% |
| AGATGGAATCTATATGCATA+AGG | + | chr3_1:2545861-2545880 | None:intergenic | 30.0% | |
| TATTCCTCATTTCCAACTAT+TGG | - | chr3_1:2545911-2545930 | Msa0343990:intron | 30.0% | |
| TTTACCAATAGTTGGAAATG+AGG | + | chr3_1:2545918-2545937 | None:intergenic | 30.0% | |
| AGCTACGAAGAAATATTTCA+GGG | + | chr3_1:2545945-2545964 | None:intergenic | 30.0% | |
| TAGCTACGAAGAAATATTTC+AGG | + | chr3_1:2545946-2545965 | None:intergenic | 30.0% | |
| ATGCTAGTATAAATGTTGGA+GGG | + | chr3_1:2546609-2546628 | None:intergenic | 30.0% | |
| TATGCTAGTATAAATGTTGG+AGG | + | chr3_1:2546610-2546629 | None:intergenic | 30.0% | |
| ! | TGTTTGGAATTGGATTAAGA+TGG | + | chr3_1:2546811-2546830 | None:intergenic | 30.0% |
| ! | GTATTGACATTGATAGTTCA+TGG | + | chr3_1:2546915-2546934 | None:intergenic | 30.0% |
| TGTCCTATGTGAGTATTAAT+GGG | + | chr3_1:2546987-2547006 | None:intergenic | 30.0% | |
| ATGTCCTATGTGAGTATTAA+TGG | + | chr3_1:2546988-2547007 | None:intergenic | 30.0% | |
| !!! | TTTTAGAGTATACTAGCAAG+TGG | - | chr3_1:2547246-2547265 | Msa0343990:three_prime_UTR | 30.0% |
| GGCATAATTAAAATACCCAA+AGG | - | chr3_1:2547338-2547357 | Msa0343990:three_prime_UTR | 30.0% | |
| AGTTAGTAAAACTTCCCTTT+GGG | + | chr3_1:2547356-2547375 | None:intergenic | 30.0% | |
| TAGTTAGTAAAACTTCCCTT+TGG | + | chr3_1:2547357-2547376 | None:intergenic | 30.0% | |
| ! | AGGGAAGTTTTACTAACTAA+AGG | - | chr3_1:2547358-2547377 | Msa0343990:three_prime_UTR | 30.0% |
| ! | TTGATGATTGTAGGAGTAAT+TGG | + | chr3_1:2547468-2547487 | None:intergenic | 30.0% |
| AATTGAAGCATATACACCAA+AGG | - | chr3_1:2547538-2547557 | Msa0343990:CDS | 30.0% | |
| !! | ACCAATGCTTTAAAACATCA+TGG | - | chr3_1:2547633-2547652 | Msa0343990:CDS | 30.0% |
| !! | CCAATGCTTTAAAACATCAT+GGG | - | chr3_1:2547634-2547653 | Msa0343990:CDS | 30.0% |
| TTGGAAATTTAGAAAGGAAG+GGG | - | chr3_1:2547715-2547734 | Msa0343990:CDS | 30.0% | |
| ATAACACTACTAAGAACAGT+TGG | - | chr3_1:2547800-2547819 | Msa0343990:intron | 30.0% | |
| TAACACTACTAAGAACAGTT+GGG | - | chr3_1:2547801-2547820 | Msa0343990:intron | 30.0% | |
| AAGATGAAGAAATTGAGAGA+GGG | - | chr3_1:2547867-2547886 | Msa0343990:intron | 30.0% | |
| ACATAGAATTGTGTAGAAAG+TGG | - | chr3_1:2547951-2547970 | Msa0343990:intron | 30.0% | |
| !! | AGTTAGTAATGGATGTATGT+TGG | + | chr3_1:2548155-2548174 | None:intergenic | 30.0% |
| CTGACTAATTTAAACTGCAT+AGG | - | chr3_1:2548187-2548206 | Msa0343990:intron | 30.0% | |
| TGTGAAGAAATAAATCAGAG+TGG | + | chr3_1:2548238-2548257 | None:intergenic | 30.0% | |
| ! | ACTATAAGGAGTATGATGTA+AGG | + | chr3_1:2548261-2548280 | None:intergenic | 30.0% |
| TTAACAGAAGATGCACTATA+AGG | + | chr3_1:2548275-2548294 | None:intergenic | 30.0% | |
| TTATAGTGCATCTTCTGTTA+AGG | - | chr3_1:2548274-2548293 | Msa0343990:intron | 30.0% | |
| TTTATTCCAAATGTCATGTC+TGG | + | chr3_1:2548584-2548603 | None:intergenic | 30.0% | |
| TAAGATGTAGTGTGACTATT+GGG | + | chr3_1:2548616-2548635 | None:intergenic | 30.0% | |
| ATAAGATGTAGTGTGACTAT+TGG | + | chr3_1:2548617-2548636 | None:intergenic | 30.0% | |
| TATTAAATTCCATTGACCCA+AGG | - | chr3_1:2548634-2548653 | Msa0343990:intron | 30.0% | |
| TGGAAATGTTGAAAATACAG+AGG | + | chr3_1:2545448-2545467 | None:intergenic | 30.0% | |
| AATATCATTGAGGCTGAAAT+AGG | + | chr3_1:2545619-2545638 | None:intergenic | 30.0% | |
| ! | CTAGATCAAGTAAGAACTTT+TGG | + | chr3_1:2545725-2545744 | None:intergenic | 30.0% |
| AGATGGAATCTATATGCATA+AGG | + | chr3_1:2545861-2545880 | None:intergenic | 30.0% | |
| TATTCCTCATTTCCAACTAT+TGG | - | chr3_1:2545911-2545930 | Msa0343990:intron | 30.0% | |
| TTTACCAATAGTTGGAAATG+AGG | + | chr3_1:2545918-2545937 | None:intergenic | 30.0% | |
| AGCTACGAAGAAATATTTCA+GGG | + | chr3_1:2545945-2545964 | None:intergenic | 30.0% | |
| TAGCTACGAAGAAATATTTC+AGG | + | chr3_1:2545946-2545965 | None:intergenic | 30.0% | |
| TTATCTCTCATTGTAGCAAA+CGG | - | chr3_1:2549699-2549718 | Msa0343990:intron | 30.0% | |
| ATAATGTAGTCTATGACGTA+CGG | + | chr3_1:2549736-2549755 | None:intergenic | 30.0% | |
| ATGCTAGTATAAATGTTGGA+GGG | + | chr3_1:2546609-2546628 | None:intergenic | 30.0% | |
| TATGCTAGTATAAATGTTGG+AGG | + | chr3_1:2546610-2546629 | None:intergenic | 30.0% | |
| ! | TGTTTGGAATTGGATTAAGA+TGG | + | chr3_1:2546811-2546830 | None:intergenic | 30.0% |
| ! | GTATTGACATTGATAGTTCA+TGG | + | chr3_1:2546915-2546934 | None:intergenic | 30.0% |
| TGTCCTATGTGAGTATTAAT+GGG | + | chr3_1:2546987-2547006 | None:intergenic | 30.0% | |
| ATGTCCTATGTGAGTATTAA+TGG | + | chr3_1:2546988-2547007 | None:intergenic | 30.0% | |
| !!! | TTTTAGAGTATACTAGCAAG+TGG | - | chr3_1:2547246-2547265 | Msa0343990:three_prime_UTR | 30.0% |
| GGCATAATTAAAATACCCAA+AGG | - | chr3_1:2547338-2547357 | Msa0343990:three_prime_UTR | 30.0% | |
| AGTTAGTAAAACTTCCCTTT+GGG | + | chr3_1:2547356-2547375 | None:intergenic | 30.0% | |
| TAGTTAGTAAAACTTCCCTT+TGG | + | chr3_1:2547357-2547376 | None:intergenic | 30.0% | |
| ! | AGGGAAGTTTTACTAACTAA+AGG | - | chr3_1:2547358-2547377 | Msa0343990:three_prime_UTR | 30.0% |
| ! | TTGATGATTGTAGGAGTAAT+TGG | + | chr3_1:2547468-2547487 | None:intergenic | 30.0% |
| AATTGAAGCATATACACCAA+AGG | - | chr3_1:2547538-2547557 | Msa0343990:CDS | 30.0% | |
| !! | ACCAATGCTTTAAAACATCA+TGG | - | chr3_1:2547633-2547652 | Msa0343990:CDS | 30.0% |
| !! | CCAATGCTTTAAAACATCAT+GGG | - | chr3_1:2547634-2547653 | Msa0343990:CDS | 30.0% |
| TTGGAAATTTAGAAAGGAAG+GGG | - | chr3_1:2547715-2547734 | Msa0343990:CDS | 30.0% | |
| ATAACACTACTAAGAACAGT+TGG | - | chr3_1:2547800-2547819 | Msa0343990:intron | 30.0% | |
| TAACACTACTAAGAACAGTT+GGG | - | chr3_1:2547801-2547820 | Msa0343990:intron | 30.0% | |
| AAGATGAAGAAATTGAGAGA+GGG | - | chr3_1:2547867-2547886 | Msa0343990:intron | 30.0% | |
| ACATAGAATTGTGTAGAAAG+TGG | - | chr3_1:2547951-2547970 | Msa0343990:intron | 30.0% | |
| TTGTTTGTAAACTTGGTATC+CGG | + | chr3_1:2551517-2551536 | None:intergenic | 30.0% | |
| TATTATCTTGAGCCTTTCTT+GGG | + | chr3_1:2551670-2551689 | None:intergenic | 30.0% | |
| CATCATAATCTTTACCTACT+TGG | + | chr3_1:2551700-2551719 | None:intergenic | 30.0% | |
| GTGAAGTTGTTAGAATATCA+AGG | - | chr3_1:2551800-2551819 | Msa0343990:intron | 30.0% | |
| ! | TAAATGGGAAGAGTATAGTT+TGG | - | chr3_1:2552186-2552205 | Msa0343990:intron | 30.0% |
| !! | TGAAAAGTATTTCAGTTGCA+GGG | + | chr3_1:2552213-2552232 | None:intergenic | 30.0% |
| !! | TTGAAAAGTATTTCAGTTGC+AGG | + | chr3_1:2552214-2552233 | None:intergenic | 30.0% |
| !! | TTGTGTTTTTGTTTGAGTAC+AGG | - | chr3_1:2552360-2552379 | Msa0343990:intron | 30.0% |
| GAATATAATTATGACACACC+AGG | - | chr3_1:2552808-2552827 | Msa0343990:intron | 30.0% | |
| !! | TATTTTTCAACAAATCCACC+TGG | + | chr3_1:2552829-2552848 | None:intergenic | 30.0% |
| !!! | GTCTGTTTCTAACAGTTTTA+TGG | - | chr3_1:2552913-2552932 | Msa0343990:intron | 30.0% |
| !! | GAATATAAAGTGTTGATGCT+AGG | + | chr3_1:2552984-2553003 | None:intergenic | 30.0% |
| GCATCAACACTTTATATTCA+AGG | - | chr3_1:2552985-2553004 | Msa0343990:intron | 30.0% | |
| TAAACTAGATACTTTCCAGA+AGG | - | chr3_1:2553205-2553224 | Msa0343990:intron | 30.0% | |
| TCTTGAATATGAAACTCCAT+GGG | - | chr3_1:2553278-2553297 | Msa0343990:intron | 30.0% | |
| TGGCACATATCATATATAAG+CGG | - | chr3_1:2553365-2553384 | Msa0343990:intron | 30.0% | |
| GTATTGTCTCTTATAAGAGA+AGG | - | chr3_1:2553451-2553470 | Msa0343990:intron | 30.0% | |
| AAGAATGAATGGAAATGCTT+TGG | - | chr3_1:2553592-2553611 | Msa0343990:intron | 30.0% | |
| AGTGAATCAGCAAAAATATG+AGG | + | chr3_1:2553783-2553802 | None:intergenic | 30.0% | |
| ! | GTGGTGATATTAAACTTTTG+AGG | - | chr3_1:2554115-2554134 | Msa0343990:intron | 30.0% |
| TAAATGTACAAACCAATGTG+TGG | - | chr3_1:2554237-2554256 | Msa0343990:intron | 30.0% | |
| TTGTGTCACAAAAATCTTTG+TGG | + | chr3_1:2554304-2554323 | None:intergenic | 30.0% | |
| ATGTTCATGTCTGATTCTTT+AGG | + | chr3_1:2554389-2554408 | None:intergenic | 30.0% | |
| AACATAGTTGCAATTGATCA+AGG | - | chr3_1:2554608-2554627 | Msa0343990:intron | 30.0% | |
| ! | TAGTTTGGAGTCTTACTAAA+TGG | - | chr3_1:2554768-2554787 | Msa0343990:intron | 30.0% |
| ! | AGTTTGGAGTCTTACTAAAT+GGG | - | chr3_1:2554769-2554788 | Msa0343990:intron | 30.0% |
| ! | TAAATGGGAAGAGTATAGTT+TGG | - | chr3_1:2552186-2552205 | Msa0343990:intron | 30.0% |
| ! | ATTTTGAACATTCCAGTTGT+AGG | + | chr3_1:2554812-2554831 | None:intergenic | 30.0% |
| AGCATATATACCAAGAATTC+CGG | + | chr3_1:2554867-2554886 | None:intergenic | 30.0% | |
| !! | TATGCTGGTTTCTTTGAATT+AGG | - | chr3_1:2555001-2555020 | Msa0343990:intron | 30.0% |
| TGGTTCTTCTTTGTAGTTAA+AGG | + | chr3_1:2555436-2555455 | None:intergenic | 30.0% | |
| CTATGTATCAGTGTTAGTAT+CGG | - | chr3_1:2555667-2555686 | Msa0343990:intron | 30.0% | |
| TAAATTAGGTACTTTCCAGA+AGG | - | chr3_1:2555776-2555795 | Msa0343990:intron | 30.0% | |
| ! | GACATATACTTTGAGAATGT+TGG | - | chr3_1:2555803-2555822 | Msa0343990:intron | 30.0% |
| ! | CATATACTTTGAGAATGTTG+GGG | - | chr3_1:2555805-2555824 | Msa0343990:intron | 30.0% |
| ! | ATATACTTTGAGAATGTTGG+GGG | - | chr3_1:2555806-2555825 | Msa0343990:intron | 30.0% |
| TGGCACAAATCATATATAAG+CGG | - | chr3_1:2555936-2555955 | Msa0343990:intron | 30.0% | |
| GATAATTACAATCAACAGAG+TGG | + | chr3_1:2556286-2556305 | None:intergenic | 30.0% | |
| !! | ATTTTGAGAGACTATGTGTC+TGG | - | chr3_1:2544792-2544811 | Msa0343990:intron | 35.0% |
| ACGTTCATGTCTGATTCTAT+AGG | + | chr3_1:2544822-2544841 | None:intergenic | 35.0% | |
| TTTGAGCAGAACTACATCAT+TGG | + | chr3_1:2544883-2544902 | None:intergenic | 35.0% | |
| !!! | GCTTTTGAAATTAGGAAGTG+GGG | - | chr3_1:2545063-2545082 | Msa0343990:intron | 35.0% |
| AACATTATTGCTAACCCACT+TGG | - | chr3_1:2545211-2545230 | Msa0343990:intron | 35.0% | |
| ACATTATTGCTAACCCACTT+GGG | - | chr3_1:2545212-2545231 | Msa0343990:intron | 35.0% | |
| GTTAAGAGAAGCAAACTCTA+AGG | + | chr3_1:2545262-2545281 | None:intergenic | 35.0% | |
| ! | AGTTTGTTTAATAGGCTTGC+CGG | + | chr3_1:2545376-2545395 | None:intergenic | 35.0% |
| AAACTCTGTCGAAATTTCAG+TGG | + | chr3_1:2545425-2545444 | None:intergenic | 35.0% | |
| ! | TTGTCTTAGTGTTGTTGATG+AGG | + | chr3_1:2545750-2545769 | None:intergenic | 35.0% |
| GCTACGAAGAAATATTTCAG+GGG | + | chr3_1:2545944-2545963 | None:intergenic | 35.0% | |
| GGAACCAAGGAAAAATTCTA+AGG | + | chr3_1:2546034-2546053 | None:intergenic | 35.0% | |
| ATAATGTAGCCTATGAGGTA+CGG | + | chr3_1:2546152-2546171 | None:intergenic | 35.0% | |
| TTATCTCTCGTTGTAGCAAA+CGG | - | chr3_1:2546168-2546187 | Msa0343990:intron | 35.0% | |
| TTATCTCTCGTTGTAGCAAA+CGG | - | chr3_1:2546168-2546187 | Msa0343990:intron | 35.0% | |
| ATAATGTAGCCTATGACGTA+CGG | + | chr3_1:2546258-2546277 | None:intergenic | 35.0% | |
| TTATCTCTCGTTGTAGCAAA+CGG | - | chr3_1:2546168-2546187 | Msa0343990:intron | 35.0% | |
| ATAATGTAGCCTATGACGTA+CGG | + | chr3_1:2546258-2546277 | None:intergenic | 35.0% | |
| TTATCTCTCGTTGTAGCAAA+CGG | - | chr3_1:2546168-2546187 | Msa0343990:intron | 35.0% | |
| ATAATGTAGCCTATGACGTA+CGG | + | chr3_1:2546258-2546277 | None:intergenic | 35.0% | |
| TTATCTCTCGTTGTAGCAAA+CGG | - | chr3_1:2546168-2546187 | Msa0343990:intron | 35.0% | |
| TGGATTAAGATGGTGATTGA+TGG | + | chr3_1:2546801-2546820 | None:intergenic | 35.0% | |
| CTACCCATTAATACTCACAT+AGG | - | chr3_1:2546981-2547000 | Msa0343990:intron | 35.0% | |
| !! | GGAAATAAATGGCTTTAGCT+TGG | + | chr3_1:2547061-2547080 | None:intergenic | 35.0% |
| AGTGTATGTCTGCACAATTT+CGG | + | chr3_1:2547161-2547180 | None:intergenic | 35.0% | |
| ! | GTTTATGGTGGTGTTGAAAT+TGG | + | chr3_1:2547208-2547227 | None:intergenic | 35.0% |
| TAAAGGAACTCACAATCTTG+TGG | - | chr3_1:2547375-2547394 | Msa0343990:three_prime_UTR | 35.0% | |
| ATGATTGTAGGAGTAATTGG+AGG | + | chr3_1:2547465-2547484 | None:intergenic | 35.0% | |
| !! | TTTTGGGGAAAAATTGCCTT+TGG | + | chr3_1:2547557-2547576 | None:intergenic | 35.0% |
| ! | GCAATTTTTCCCCAAAATGA+TGG | - | chr3_1:2547560-2547579 | Msa0343990:CDS | 35.0% |
| ! | TTCCCCAAAATGATGGAATA+AGG | - | chr3_1:2547567-2547586 | Msa0343990:CDS | 35.0% |
| ! | TCCCCAAAATGATGGAATAA+GGG | - | chr3_1:2547568-2547587 | Msa0343990:CDS | 35.0% |
| ATGCTTCTTTCTTTCTGTGT+TGG | + | chr3_1:2547601-2547620 | None:intergenic | 35.0% | |
| !!! | CCCATGATGTTTTAAAGCAT+TGG | + | chr3_1:2547637-2547656 | None:intergenic | 35.0% |
| GTGATTCTTGAGGATTTGAA+TGG | - | chr3_1:2547837-2547856 | Msa0343990:intron | 35.0% | |
| TCTTGAGGATTTGAATGGTT+TGG | - | chr3_1:2547842-2547861 | Msa0343990:intron | 35.0% | |
| GAAGATGAAGAAATTGAGAG+AGG | - | chr3_1:2547866-2547885 | Msa0343990:intron | 35.0% | |
| TTACACACACAACACCATAT+CGG | + | chr3_1:2547895-2547914 | None:intergenic | 35.0% | |
| ! | AGGACGAAATTTCTTTAAGG+GGG | + | chr3_1:2548067-2548086 | None:intergenic | 35.0% |
| GAGGACGAAATTTCTTTAAG+GGG | + | chr3_1:2548068-2548087 | None:intergenic | 35.0% | |
| CGAGGACGAAATTTCTTTAA+GGG | + | chr3_1:2548069-2548088 | None:intergenic | 35.0% | |
| TCGAGGACGAAATTTCTTTA+AGG | + | chr3_1:2548070-2548089 | None:intergenic | 35.0% | |
| !! | TATACTAGTCTGAGTTGATC+AGG | - | chr3_1:2548553-2548572 | Msa0343990:CDS | 35.0% |
| ! | AGTTTGTTTAATAGGCTTGC+CGG | + | chr3_1:2545376-2545395 | None:intergenic | 35.0% |
| AAACTCTGTCGAAATTTCAG+TGG | + | chr3_1:2545425-2545444 | None:intergenic | 35.0% | |
| ! | TTGTCTTAGTGTTGTTGATG+AGG | + | chr3_1:2545750-2545769 | None:intergenic | 35.0% |
| GCTACGAAGAAATATTTCAG+GGG | + | chr3_1:2545944-2545963 | None:intergenic | 35.0% | |
| GGAACCAAGGAAAAATTCTA+AGG | + | chr3_1:2546034-2546053 | None:intergenic | 35.0% | |
| ATAATGTAGCCTATGAGGTA+CGG | + | chr3_1:2546152-2546171 | None:intergenic | 35.0% | |
| TTATCTCTCGTTGTAGCAAA+CGG | - | chr3_1:2546168-2546187 | Msa0343990:intron | 35.0% | |
| TTATCTCTCGTTGTAGCAAA+CGG | - | chr3_1:2546168-2546187 | Msa0343990:intron | 35.0% | |
| ATAATGTAGCCTATGACGTA+CGG | + | chr3_1:2546258-2546277 | None:intergenic | 35.0% | |
| TAATGTAGTCTATGACGTAC+GGG | + | chr3_1:2549735-2549754 | None:intergenic | 35.0% | |
| TTATCTCTCGTTGTAGCAAA+CGG | - | chr3_1:2546168-2546187 | Msa0343990:intron | 35.0% | |
| TGGATTAAGATGGTGATTGA+TGG | + | chr3_1:2546801-2546820 | None:intergenic | 35.0% | |
| CTACCCATTAATACTCACAT+AGG | - | chr3_1:2546981-2547000 | Msa0343990:intron | 35.0% | |
| !! | GGAAATAAATGGCTTTAGCT+TGG | + | chr3_1:2547061-2547080 | None:intergenic | 35.0% |
| AGTGTATGTCTGCACAATTT+CGG | + | chr3_1:2547161-2547180 | None:intergenic | 35.0% | |
| ! | GTTTATGGTGGTGTTGAAAT+TGG | + | chr3_1:2547208-2547227 | None:intergenic | 35.0% |
| TAAAGGAACTCACAATCTTG+TGG | - | chr3_1:2547375-2547394 | Msa0343990:three_prime_UTR | 35.0% | |
| ATGATTGTAGGAGTAATTGG+AGG | + | chr3_1:2547465-2547484 | None:intergenic | 35.0% | |
| !! | TTTTGGGGAAAAATTGCCTT+TGG | + | chr3_1:2547557-2547576 | None:intergenic | 35.0% |
| ! | GCAATTTTTCCCCAAAATGA+TGG | - | chr3_1:2547560-2547579 | Msa0343990:CDS | 35.0% |
| ! | TTCCCCAAAATGATGGAATA+AGG | - | chr3_1:2547567-2547586 | Msa0343990:CDS | 35.0% |
| ! | TCCCCAAAATGATGGAATAA+GGG | - | chr3_1:2547568-2547587 | Msa0343990:CDS | 35.0% |
| ATGCTTCTTTCTTTCTGTGT+TGG | + | chr3_1:2547601-2547620 | None:intergenic | 35.0% | |
| !!! | CCCATGATGTTTTAAAGCAT+TGG | + | chr3_1:2547637-2547656 | None:intergenic | 35.0% |
| GTGATTCTTGAGGATTTGAA+TGG | - | chr3_1:2547837-2547856 | Msa0343990:intron | 35.0% | |
| TCTTGAGGATTTGAATGGTT+TGG | - | chr3_1:2547842-2547861 | Msa0343990:intron | 35.0% | |
| GAAGATGAAGAAATTGAGAG+AGG | - | chr3_1:2547866-2547885 | Msa0343990:intron | 35.0% | |
| TTACACACACAACACCATAT+CGG | + | chr3_1:2547895-2547914 | None:intergenic | 35.0% | |
| TAAAGCAGCAAGACTATGTA+TGG | + | chr3_1:2551436-2551455 | None:intergenic | 35.0% | |
| GTTGGACTCTTTAGATTAGT+TGG | - | chr3_1:2551484-2551503 | Msa0343990:intron | 35.0% | |
| !! | TAGATTAGTTGGTCTTAAGC+CGG | - | chr3_1:2551495-2551514 | Msa0343990:intron | 35.0% |
| CTATTATCTTGAGCCTTTCT+TGG | + | chr3_1:2551671-2551690 | None:intergenic | 35.0% | |
| GATAATAGAATAGCCCAAGT+AGG | - | chr3_1:2551683-2551702 | Msa0343990:intron | 35.0% | |
| !! | CTAGATCCTTCTAAAACATG+AGG | + | chr3_1:2551755-2551774 | None:intergenic | 35.0% |
| AGTAATTTCTCCTTCCTTGT+AGG | - | chr3_1:2551923-2551942 | Msa0343990:intron | 35.0% | |
| !! | TATGGTTACAGTTTGTTGAC+TGG | - | chr3_1:2552032-2552051 | Msa0343990:intron | 35.0% |
| !! | ATGGTTACAGTTTGTTGACT+GGG | - | chr3_1:2552033-2552052 | Msa0343990:intron | 35.0% |
| ! | GTGTCTAAAGTTGTAGAATC+TGG | - | chr3_1:2552121-2552140 | Msa0343990:intron | 35.0% |
| TAGTTTGGGGAATGACTAAA+TGG | - | chr3_1:2552170-2552189 | Msa0343990:intron | 35.0% | |
| AGTTTGGGGAATGACTAAAT+GGG | - | chr3_1:2552171-2552190 | Msa0343990:intron | 35.0% | |
| ATTCCAGTATAGTAGGAAAG+CGG | + | chr3_1:2552256-2552275 | None:intergenic | 35.0% | |
| TCCTACTATACTGGAATTCT+CGG | - | chr3_1:2552259-2552278 | Msa0343990:intron | 35.0% | |
| TGTCATGAATCACAACGAAA+TGG | + | chr3_1:2552336-2552355 | None:intergenic | 35.0% | |
| !! | TATGCTGGTTTCTTTGAAGT+AGG | - | chr3_1:2552402-2552421 | Msa0343990:intron | 35.0% |
| AAAACTGTCTCTCCTTTCTT+AGG | + | chr3_1:2552432-2552451 | None:intergenic | 35.0% | |
| AACCATGCAATTTGGCAAAT+TGG | + | chr3_1:2552494-2552513 | None:intergenic | 35.0% | |
| AACATAGCAACCATGCAATT+TGG | + | chr3_1:2552502-2552521 | None:intergenic | 35.0% | |
| ! | GGATAGTGGTTATTGTAGTT+AGG | + | chr3_1:2552674-2552693 | None:intergenic | 35.0% |
| TCAACAAGTGAGCAAAGATT+TGG | + | chr3_1:2552695-2552714 | None:intergenic | 35.0% | |
| ! | AAATCTTTGCTCACTTGTTG+AGG | - | chr3_1:2552694-2552713 | Msa0343990:intron | 35.0% |
| TATAATTATGACACACCAGG+TGG | - | chr3_1:2552811-2552830 | Msa0343990:intron | 35.0% | |
| ! | GACATTTACTTTGAGAACGT+TGG | - | chr3_1:2553232-2553251 | Msa0343990:intron | 35.0% |
| ! | ATTTACTTTGAGAACGTTGG+AGG | - | chr3_1:2553235-2553254 | Msa0343990:intron | 35.0% |
| CTCTTGAATATGAAACTCCA+TGG | - | chr3_1:2553277-2553296 | Msa0343990:intron | 35.0% | |
| TACAATCTTACTCAACCTGA+AGG | - | chr3_1:2553331-2553350 | Msa0343990:intron | 35.0% | |
| GTCTCTTATAAGAGAAGGAA+AGG | - | chr3_1:2553456-2553475 | Msa0343990:intron | 35.0% | |
| CTGTTTAGTGGTCAAAATGT+TGG | - | chr3_1:2553538-2553557 | Msa0343990:intron | 35.0% | |
| CTCATGAGTGAAAGAATGAA+TGG | - | chr3_1:2553581-2553600 | Msa0343990:intron | 35.0% | |
| TGTGTTTAGTTACTTGTGCA+TGG | - | chr3_1:2553656-2553675 | Msa0343990:intron | 35.0% | |
| AATCAACAGAATGGATGAAG+AGG | + | chr3_1:2553708-2553727 | None:intergenic | 35.0% | |
| GAACAAGCAAGTGATTCTAA+AGG | - | chr3_1:2554346-2554365 | Msa0343990:intron | 35.0% | |
| ! | ATTCTAAAGGACTATGTGTC+TGG | - | chr3_1:2554359-2554378 | Msa0343990:intron | 35.0% |
| AATTGATGAAAGAGAGAGCA+TGG | + | chr3_1:2554565-2554584 | None:intergenic | 35.0% | |
| ! | GTGTCTAAAGTTGTAGAATC+TGG | - | chr3_1:2552121-2552140 | Msa0343990:intron | 35.0% |
| ! | TATAGTTTGGTTCCTACAAC+TGG | - | chr3_1:2554797-2554816 | Msa0343990:intron | 35.0% |
| TTCCGGTATAATAGGAAAGT+GGG | + | chr3_1:2554850-2554869 | None:intergenic | 35.0% | |
| ATTCCGGTATAATAGGAAAG+TGG | + | chr3_1:2554851-2554870 | None:intergenic | 35.0% | |
| TCCTATTATACCGGAATTCT+TGG | - | chr3_1:2554854-2554873 | Msa0343990:intron | 35.0% | |
| ACCAAGAATTCCGGTATAAT+AGG | + | chr3_1:2554858-2554877 | None:intergenic | 35.0% | |
| !! | TTACGCTTTTGTTTGAGTAC+AGG | - | chr3_1:2554959-2554978 | Msa0343990:intron | 35.0% |
| GAATTAGGCAGTCCTAAAAA+AGG | - | chr3_1:2555016-2555035 | Msa0343990:intron | 35.0% | |
| GGTCAATTTGCAAAATTGCA+TGG | - | chr3_1:2555088-2555107 | Msa0343990:intron | 35.0% | |
| TTGCATGGTTGTTATGTTGT+TGG | - | chr3_1:2555103-2555122 | Msa0343990:intron | 35.0% | |
| !! | AAGTGCTGGAACTAAAGAAA+AGG | - | chr3_1:2555126-2555145 | Msa0343990:intron | 35.0% |
| GGATTGTGGTTATTGCAATT+AGG | + | chr3_1:2555268-2555287 | None:intergenic | 35.0% | |
| TTCTTATAATCTGGCACACT+AGG | - | chr3_1:2555374-2555393 | Msa0343990:intron | 35.0% | |
| !! | ACCTCAATGCAGCTTTAAAA+AGG | - | chr3_1:2555457-2555476 | Msa0343990:intron | 35.0% |
| !!! | ACCTTTTTAAAGCTGCATTG+AGG | + | chr3_1:2555461-2555480 | None:intergenic | 35.0% |
| !! | ATAAAGTGTCGATGCTACAT+AGG | + | chr3_1:2555547-2555566 | None:intergenic | 35.0% |
| ! | GCATCGACACTTTATATTGA+AGG | - | chr3_1:2555552-2555571 | Msa0343990:intron | 35.0% |
| CATAGACACAGGCAATAATT+TGG | + | chr3_1:2555652-2555671 | None:intergenic | 35.0% | |
| TAACACTGATACATAGACAC+AGG | + | chr3_1:2555663-2555682 | None:intergenic | 35.0% | |
| AAGTATATGTCAATGCCTTC+TGG | + | chr3_1:2555794-2555813 | None:intergenic | 35.0% | |
| ! | TATACTTTGAGAATGTTGGG+GGG | - | chr3_1:2555807-2555826 | Msa0343990:intron | 35.0% |
| ! | CTTTTGAATATGAGAGTCCA+TGG | - | chr3_1:2555848-2555867 | Msa0343990:intron | 35.0% |
| TACAATCTTACTCAACCTGA+AGG | - | chr3_1:2553331-2553350 | Msa0343990:intron | 35.0% | |
| TTCCTTCTCTAATAAGAGAC+AGG | + | chr3_1:2556027-2556046 | None:intergenic | 35.0% | |
| GTCTCTTATTAGAGAAGGAA+AGG | - | chr3_1:2556027-2556046 | Msa0343990:CDS | 35.0% | |
| ATGAATGAATGCTGATGCTA+TGG | - | chr3_1:2556167-2556186 | Msa0343990:CDS | 35.0% | |
| ! | CTTGTGTATGAAGCATTCTT+TGG | - | chr3_1:2556237-2556256 | Msa0343990:five_prime_UTR | 35.0% |
| GACACAAATGTGTCAAGAGT+TGG | + | chr3_1:2544682-2544701 | None:intergenic | 40.0% | |
| ! | ACTTGTGCCATGTTTGGAAT+TGG | + | chr3_1:2544756-2544775 | None:intergenic | 40.0% |
| TTTCTCACTTGTGCCATGTT+TGG | + | chr3_1:2544762-2544781 | None:intergenic | 40.0% | |
| ATTACTCTCAAGCTTCCACA+AGG | - | chr3_1:2544855-2544874 | Msa0343990:intron | 40.0% | |
| ACTACATCATTGGAACCTTG+TGG | + | chr3_1:2544873-2544892 | None:intergenic | 40.0% | |
| GATTCTCAGATAAGGATCAC+AGG | + | chr3_1:2544919-2544938 | None:intergenic | 40.0% | |
| TCCTTATCTGAGAATCCTGA+TGG | - | chr3_1:2544923-2544942 | Msa0343990:intron | 40.0% | |
| TAGCATGACATACAGAACCA+GGG | + | chr3_1:2544983-2545002 | None:intergenic | 40.0% | |
| ATAGCATGACATACAGAACC+AGG | + | chr3_1:2544984-2545003 | None:intergenic | 40.0% | |
| TCTTAACGTTTCGATTCCCT+CGG | - | chr3_1:2545275-2545294 | Msa0343990:intron | 40.0% | |
| !! | CGGTCACGATGATTGTTTTT+GGG | + | chr3_1:2545330-2545349 | None:intergenic | 40.0% |
| CCAAAAACAATCATCGTGAC+CGG | - | chr3_1:2545328-2545347 | Msa0343990:intron | 40.0% | |
| ACGAACTAGATCATTCTAGC+CGG | - | chr3_1:2545354-2545373 | Msa0343990:intron | 40.0% | |
| !! | GAGATTCTGGCTTATAGAAC+AGG | + | chr3_1:2545494-2545513 | None:intergenic | 40.0% |
| GTGATGTATCTGCAGCTATT+TGG | + | chr3_1:2545576-2545595 | None:intergenic | 40.0% | |
| CATTGAGGCTGAAATAGGAT+TGG | + | chr3_1:2545614-2545633 | None:intergenic | 40.0% | |
| !!! | AGGGGCATTTTACCAATAGT+TGG | + | chr3_1:2545926-2545945 | None:intergenic | 40.0% |
| ! | GGGTCCTTAGAATTTTTCCT+TGG | - | chr3_1:2546027-2546046 | Msa0343990:intron | 40.0% |
| GAGAGATAATGTAGCCTATG+AGG | + | chr3_1:2546157-2546176 | None:intergenic | 40.0% | |
| ATAATGTAGCCTATGGCGTA+CGG | + | chr3_1:2546205-2546224 | None:intergenic | 40.0% | |
| ACGAGAGATAATGTAGCCTA+TGG | + | chr3_1:2546159-2546178 | None:intergenic | 40.0% | |
| TAATGTAGCCTATGACGTAC+GGG | + | chr3_1:2546257-2546276 | None:intergenic | 40.0% | |
| TAATGTAGCCTATGACGTAC+GGG | + | chr3_1:2546257-2546276 | None:intergenic | 40.0% | |
| TAATGTAGCCTATGACGTAC+GGG | + | chr3_1:2546257-2546276 | None:intergenic | 40.0% | |
| ! | TATGGTGGTGTTGAAATTGG+AGG | + | chr3_1:2547205-2547224 | None:intergenic | 40.0% |
| !! | GATTCCTCTAGAACACTTTG+TGG | - | chr3_1:2547399-2547418 | Msa0343990:exon | 40.0% |
| ! | TTTGCCACAAAGTGTTCTAG+AGG | + | chr3_1:2547406-2547425 | None:intergenic | 40.0% |
| AAGGAATTTAGCTAGTGGCT+TGG | + | chr3_1:2547439-2547458 | None:intergenic | 40.0% | |
| GGAAGAAGGAATTTAGCTAG+TGG | + | chr3_1:2547444-2547463 | None:intergenic | 40.0% | |
| TAGGAGTAATTGGAGGAAGA+AGG | + | chr3_1:2547458-2547477 | None:intergenic | 40.0% | |
| ! | CCCCTTATTCCATCATTTTG+GGG | + | chr3_1:2547572-2547591 | None:intergenic | 40.0% |
| ! | CCCCAAAATGATGGAATAAG+GGG | - | chr3_1:2547569-2547588 | Msa0343990:CDS | 40.0% |
| ! | GCCCCTTATTCCATCATTTT+GGG | + | chr3_1:2547573-2547592 | None:intergenic | 40.0% |
| ! | CAAAATGATGGAATAAGGGG+CGG | - | chr3_1:2547572-2547591 | Msa0343990:CDS | 40.0% |
| CTTCTTTCTTTCTGTGTTGG+AGG | + | chr3_1:2547598-2547617 | None:intergenic | 40.0% | |
| GAAATTTAGAAAGGAAGGGG+CGG | - | chr3_1:2547718-2547737 | Msa0343990:CDS | 40.0% | |
| GGCTATTGTAGTGATTCTTG+AGG | - | chr3_1:2547827-2547846 | Msa0343990:intron | 40.0% | |
| ! | GGACGAAATTTCTTTAAGGG+GGG | + | chr3_1:2548066-2548085 | None:intergenic | 40.0% |
| GTTGAACGTTACTTCGTATG+TGG | + | chr3_1:2548336-2548355 | None:intergenic | 40.0% | |
| AGTACGCGAAGAAGAAAAGT+CGG | + | chr3_1:2548483-2548502 | None:intergenic | 40.0% | |
| CAAATGTCTGAGAGCTGAAT+AGG | + | chr3_1:2548521-2548540 | None:intergenic | 40.0% | |
| !!! | TTTTTGGGTCGTGACAAAGT+TGG | + | chr3_1:2548687-2548706 | None:intergenic | 40.0% |
| !! | CGGTCACGATGATTGTTTTT+GGG | + | chr3_1:2545330-2545349 | None:intergenic | 40.0% |
| CCAAAAACAATCATCGTGAC+CGG | - | chr3_1:2545328-2545347 | Msa0343990:intron | 40.0% | |
| ACGAACTAGATCATTCTAGC+CGG | - | chr3_1:2545354-2545373 | Msa0343990:intron | 40.0% | |
| !! | GAGATTCTGGCTTATAGAAC+AGG | + | chr3_1:2545494-2545513 | None:intergenic | 40.0% |
| GTGATGTATCTGCAGCTATT+TGG | + | chr3_1:2545576-2545595 | None:intergenic | 40.0% | |
| CATTGAGGCTGAAATAGGAT+TGG | + | chr3_1:2545614-2545633 | None:intergenic | 40.0% | |
| !!! | AGGGGCATTTTACCAATAGT+TGG | + | chr3_1:2545926-2545945 | None:intergenic | 40.0% |
| ! | GGGTCCTTAGAATTTTTCCT+TGG | - | chr3_1:2546027-2546046 | Msa0343990:intron | 40.0% |
| GAGAGATAATGTAGCCTATG+AGG | + | chr3_1:2546157-2546176 | None:intergenic | 40.0% | |
| ATAATGTAGCCTATGGCGTA+CGG | + | chr3_1:2546205-2546224 | None:intergenic | 40.0% | |
| ACGAGAGATAATGTAGCCTA+TGG | + | chr3_1:2546159-2546178 | None:intergenic | 40.0% | |
| TAATGTAGCCTATGACGTAC+GGG | + | chr3_1:2546257-2546276 | None:intergenic | 40.0% | |
| ! | TATGGTGGTGTTGAAATTGG+AGG | + | chr3_1:2547205-2547224 | None:intergenic | 40.0% |
| !! | GATTCCTCTAGAACACTTTG+TGG | - | chr3_1:2547399-2547418 | Msa0343990:exon | 40.0% |
| ! | TTTGCCACAAAGTGTTCTAG+AGG | + | chr3_1:2547406-2547425 | None:intergenic | 40.0% |
| AAGGAATTTAGCTAGTGGCT+TGG | + | chr3_1:2547439-2547458 | None:intergenic | 40.0% | |
| GGAAGAAGGAATTTAGCTAG+TGG | + | chr3_1:2547444-2547463 | None:intergenic | 40.0% | |
| TAGGAGTAATTGGAGGAAGA+AGG | + | chr3_1:2547458-2547477 | None:intergenic | 40.0% | |
| ! | CCCCTTATTCCATCATTTTG+GGG | + | chr3_1:2547572-2547591 | None:intergenic | 40.0% |
| ! | CCCCAAAATGATGGAATAAG+GGG | - | chr3_1:2547569-2547588 | Msa0343990:CDS | 40.0% |
| ! | GCCCCTTATTCCATCATTTT+GGG | + | chr3_1:2547573-2547592 | None:intergenic | 40.0% |
| ! | CAAAATGATGGAATAAGGGG+CGG | - | chr3_1:2547572-2547591 | Msa0343990:CDS | 40.0% |
| CTTCTTTCTTTCTGTGTTGG+AGG | + | chr3_1:2547598-2547617 | None:intergenic | 40.0% | |
| GAAATTTAGAAAGGAAGGGG+CGG | - | chr3_1:2547718-2547737 | Msa0343990:CDS | 40.0% | |
| GGCTATTGTAGTGATTCTTG+AGG | - | chr3_1:2547827-2547846 | Msa0343990:intron | 40.0% | |
| !! | GTGAGTCCTCATGTTTTAGA+AGG | - | chr3_1:2551746-2551765 | Msa0343990:intron | 40.0% |
| CACCTACGACTCATCATAAT+GGG | + | chr3_1:2551783-2551802 | None:intergenic | 40.0% | |
| TCACCTACGACTCATCATAA+TGG | + | chr3_1:2551784-2551803 | None:intergenic | 40.0% | |
| !! | GTGTATGGTACCACTTTTGA+TGG | + | chr3_1:2551951-2551970 | None:intergenic | 40.0% |
| !! | GGGCCAATATGTCACTTTAA+CGG | - | chr3_1:2552053-2552072 | Msa0343990:intron | 40.0% |
| CTGCCGTTAAAGTGACATAT+TGG | + | chr3_1:2552059-2552078 | None:intergenic | 40.0% | |
| TTCCAGTATAGTAGGAAAGC+GGG | + | chr3_1:2552255-2552274 | None:intergenic | 40.0% | |
| ACCGAGAATTCCAGTATAGT+AGG | + | chr3_1:2552263-2552282 | None:intergenic | 40.0% | |
| TTGTTTGAGTACAGGTATGC+CGG | - | chr3_1:2552368-2552387 | Msa0343990:intron | 40.0% | |
| !! | GTTTTTGTTTCATCTGCCTC+TGG | - | chr3_1:2552447-2552466 | Msa0343990:intron | 40.0% |
| TTGCATGGTTGCTATGTTGT+TGG | - | chr3_1:2552504-2552523 | Msa0343990:intron | 40.0% | |
| !! | AAGTGCTGGAAGTAAAGAGA+AGG | - | chr3_1:2552527-2552546 | Msa0343990:intron | 40.0% |
| GTGAGCAAAGATTTGGATAG+TGG | + | chr3_1:2552688-2552707 | None:intergenic | 40.0% | |
| CACATGTGACATTGTTGTGT+TGG | + | chr3_1:2553056-2553075 | None:intergenic | 40.0% | |
| AAGTAAATGTCGATGCCTTC+TGG | + | chr3_1:2553223-2553242 | None:intergenic | 40.0% | |
| !! | ACCTGAAGGTGTCACAAATT+TGG | - | chr3_1:2553345-2553364 | Msa0343990:intron | 40.0% |
| ! | CATATATAAGCGGATTCGGA+TGG | - | chr3_1:2553375-2553394 | Msa0343990:intron | 40.0% |
| AGAAGGAAAGGTTGTGTATG+TGG | - | chr3_1:2553468-2553487 | Msa0343990:intron | 40.0% | |
| TATGTGGAAGACATAGCTGA+GGG | - | chr3_1:2553484-2553503 | Msa0343990:intron | 40.0% | |
| ATGGATGAAGAGGTTTCCAA+AGG | + | chr3_1:2553698-2553717 | None:intergenic | 40.0% | |
| TAGTACAACTGACCACACAT+TGG | + | chr3_1:2554252-2554271 | None:intergenic | 40.0% | |
| TTGTGACACAATTCCTGAGA+TGG | - | chr3_1:2554313-2554332 | Msa0343990:intron | 40.0% | |
| TTGTGGAAGGTTGAGAGTTA+TGG | + | chr3_1:2554423-2554442 | None:intergenic | 40.0% | |
| ATAACTCTCAACCTTCCACA+AGG | - | chr3_1:2554422-2554441 | Msa0343990:intron | 40.0% | |
| TTTGAGCAGAACAACATCGT+TGG | + | chr3_1:2554450-2554469 | None:intergenic | 40.0% | |
| GTCCCACTTTCCTATTATAC+CGG | - | chr3_1:2554845-2554864 | Msa0343990:intron | 40.0% | |
| TTGTTTGAGTACAGGTATGC+CGG | - | chr3_1:2552368-2552387 | Msa0343990:intron | 40.0% | |
| GTTTATGTTTCAGCTGCATC+TGG | - | chr3_1:2555046-2555065 | Msa0343990:intron | 40.0% | |
| ! | TGTTATGTTGTTGGAAGTGC+TGG | - | chr3_1:2555112-2555131 | Msa0343990:intron | 40.0% |
| AATCCATGTCTTTGTTCGCT+TGG | - | chr3_1:2555283-2555302 | Msa0343990:intron | 40.0% | |
| TTATAATCTGGCACACTAGG+TGG | - | chr3_1:2555377-2555396 | Msa0343990:intron | 40.0% | |
| ! | TTTAAAGCTGCATTGAGGTC+TGG | + | chr3_1:2555456-2555475 | None:intergenic | 40.0% |
| TGTCAGACAGTAACATGTGT+AGG | + | chr3_1:2555581-2555600 | None:intergenic | 40.0% | |
| TCATTCCACTTACAGGTATG+CGG | + | chr3_1:2555874-2555893 | None:intergenic | 40.0% | |
| TGTGAGATCATTCCACTTAC+AGG | + | chr3_1:2555881-2555900 | None:intergenic | 40.0% | |
| !! | ACCTGAAGGTGTCACAAATT+TGG | - | chr3_1:2553345-2553364 | Msa0343990:intron | 40.0% |
| ! | ATATAAGCGGATTCGAATCG+AGG | - | chr3_1:2555949-2555968 | Msa0343990:intron | 40.0% |
| ! | TATAAGCGGATTCGAATCGA+GGG | - | chr3_1:2555950-2555969 | Msa0343990:intron | 40.0% |
| GTCCTGTCTCTTATTAGAGA+AGG | - | chr3_1:2556022-2556041 | Msa0343990:CDS | 40.0% | |
| AGAAGGAAAGGTTGTGTATG+TGG | - | chr3_1:2553468-2553487 | Msa0343990:intron | 40.0% | |
| TATGTGGAAGACATAGCTGA+GGG | - | chr3_1:2553484-2553503 | Msa0343990:intron | 40.0% | |
| AGCATTCTTTGGATGACCTT+TGG | - | chr3_1:2556248-2556267 | Msa0343990:five_prime_UTR | 40.0% | |
| AATCAACAGAGTGGATGAAG+AGG | + | chr3_1:2556277-2556296 | None:intergenic | 40.0% | |
| ! | AAGAGTTGGTTGAGTCGTGT+GGG | + | chr3_1:2544668-2544687 | None:intergenic | 45.0% |
| GCCATCAGGATTCTCAGATA+AGG | + | chr3_1:2544927-2544946 | None:intergenic | 45.0% | |
| AAGTCCTGCAATAGTGTCCT+TGG | + | chr3_1:2544949-2544968 | None:intergenic | 45.0% | |
| AAGGACACTATTGCAGGACT+TGG | - | chr3_1:2544948-2544967 | Msa0343990:intron | 45.0% | |
| AGCATGACATACAGAACCAG+GGG | + | chr3_1:2544982-2545001 | None:intergenic | 45.0% | |
| TATTGCTAACCCACTTGGGT+TGG | - | chr3_1:2545216-2545235 | Msa0343990:intron | 45.0% | |
| !!! | GATTCCCTCGGTGTCAATTT+TGG | - | chr3_1:2545287-2545306 | Msa0343990:intron | 45.0% |
| ! | CCGGTCACGATGATTGTTTT+TGG | + | chr3_1:2545331-2545350 | None:intergenic | 45.0% |
| TACTATGAGCCGTACCTCAT+AGG | - | chr3_1:2546140-2546159 | Msa0343990:intron | 45.0% | |
| TAATGTAGCCTATGGCGTAC+GGG | + | chr3_1:2546204-2546223 | None:intergenic | 45.0% | |
| TACTATGACCCGTACGTCAT+AGG | - | chr3_1:2546246-2546265 | Msa0343990:intron | 45.0% | |
| TACTATGACCCGTACGTCAT+AGG | - | chr3_1:2546246-2546265 | Msa0343990:intron | 45.0% | |
| TACTATGACCCGTACGTCAT+AGG | - | chr3_1:2546246-2546265 | Msa0343990:intron | 45.0% | |
| CACAATTTCGGCTAGAACTC+TGG | + | chr3_1:2547149-2547168 | None:intergenic | 45.0% | |
| ! | GTGGTGTTGAAATTGGAGGA+AGG | + | chr3_1:2547201-2547220 | None:intergenic | 45.0% |
| ! | TTAGCTAGTGGCTTGGAGTT+GGG | + | chr3_1:2547432-2547451 | None:intergenic | 45.0% |
| ! | TTTAGCTAGTGGCTTGGAGT+TGG | + | chr3_1:2547433-2547452 | None:intergenic | 45.0% |
| ! | CGCCCCTTATTCCATCATTT+TGG | + | chr3_1:2547574-2547593 | None:intergenic | 45.0% |
| !! | CGGTTGGCTTCTAAAATGGA+GGG | - | chr3_1:2547738-2547757 | Msa0343990:CDS | 45.0% |
| CTACTAAGAACAGTTGGGCA+TGG | - | chr3_1:2547806-2547825 | Msa0343990:intron | 45.0% | |
| AATAAATCAGAGTGGCGCAG+CGG | + | chr3_1:2548230-2548249 | None:intergenic | 45.0% | |
| CGTAAATCACCAGACACTTG+TGG | - | chr3_1:2548419-2548438 | Msa0343990:intron | 45.0% | |
| TATTCAACGCCACAAGTGTC+TGG | + | chr3_1:2548431-2548450 | None:intergenic | 45.0% | |
| GTACGCGAAGAAGAAAAGTC+GGG | + | chr3_1:2548482-2548501 | None:intergenic | 45.0% | |
| !! | GACAAAGTTGGTATCAGAGC+AGG | + | chr3_1:2548675-2548694 | None:intergenic | 45.0% |
| ! | CCGGTCACGATGATTGTTTT+TGG | + | chr3_1:2545331-2545350 | None:intergenic | 45.0% |
| TACTATGAGCCGTACCTCAT+AGG | - | chr3_1:2546140-2546159 | Msa0343990:intron | 45.0% | |
| TAATGTAGCCTATGGCGTAC+GGG | + | chr3_1:2546204-2546223 | None:intergenic | 45.0% | |
| TACTATGACCCGTACGTCAT+AGG | - | chr3_1:2546246-2546265 | Msa0343990:intron | 45.0% | |
| TACTATGACCCGTACGTCAT+AGG | - | chr3_1:2546246-2546265 | Msa0343990:intron | 45.0% | |
| CACAATTTCGGCTAGAACTC+TGG | + | chr3_1:2547149-2547168 | None:intergenic | 45.0% | |
| ! | GTGGTGTTGAAATTGGAGGA+AGG | + | chr3_1:2547201-2547220 | None:intergenic | 45.0% |
| ! | TTAGCTAGTGGCTTGGAGTT+GGG | + | chr3_1:2547432-2547451 | None:intergenic | 45.0% |
| ! | TTTAGCTAGTGGCTTGGAGT+TGG | + | chr3_1:2547433-2547452 | None:intergenic | 45.0% |
| ! | CGCCCCTTATTCCATCATTT+TGG | + | chr3_1:2547574-2547593 | None:intergenic | 45.0% |
| !! | CGGTTGGCTTCTAAAATGGA+GGG | - | chr3_1:2547738-2547757 | Msa0343990:CDS | 45.0% |
| CTACTAAGAACAGTTGGGCA+TGG | - | chr3_1:2547806-2547825 | Msa0343990:intron | 45.0% | |
| CACCCATTATGATGAGTCGT+AGG | - | chr3_1:2551778-2551797 | Msa0343990:intron | 45.0% | |
| ! | TTTGATGGCACCTACAAGGA+AGG | + | chr3_1:2551936-2551955 | None:intergenic | 45.0% |
| !! | CACTTTTGATGGCACCTACA+AGG | + | chr3_1:2551940-2551959 | None:intergenic | 45.0% |
| ! | CTTGTAGGTGCCATCAAAAG+TGG | - | chr3_1:2551938-2551957 | Msa0343990:intron | 45.0% |
| GAGTAATTGCAGCCATTGAC+AGG | - | chr3_1:2552091-2552110 | Msa0343990:intron | 45.0% | |
| TTGCAGCCATTGACAGGATT+AGG | - | chr3_1:2552097-2552116 | Msa0343990:intron | 45.0% | |
| GACACTCCTAATCCTGTCAA+TGG | + | chr3_1:2552106-2552125 | None:intergenic | 45.0% | |
| TGTTTGAGTACAGGTATGCC+GGG | - | chr3_1:2552369-2552388 | Msa0343990:intron | 45.0% | |
| GAAGTAGGCTCTCCTAAGAA+AGG | - | chr3_1:2552417-2552436 | Msa0343990:intron | 45.0% | |
| GGCCAATTTGCCAAATTGCA+TGG | - | chr3_1:2552489-2552508 | Msa0343990:intron | 45.0% | |
| ! | TGCTATGTTGTTGGAAGTGC+TGG | - | chr3_1:2552513-2552532 | Msa0343990:intron | 45.0% |
| !! | ACCTCGATGCAGCTTTGAAA+AGG | - | chr3_1:2552891-2552910 | Msa0343990:intron | 45.0% |
| ! | ACCTTTTCAAAGCTGCATCG+AGG | + | chr3_1:2552895-2552914 | None:intergenic | 45.0% |
| ! | AAGGTGTTTCCAACACGTGT+TGG | - | chr3_1:2553004-2553023 | Msa0343990:intron | 45.0% |
| TGTCAGACACTAACACGTGT+CGG | + | chr3_1:2553033-2553052 | None:intergenic | 45.0% | |
| TGTGAGATCATTCCACACAC+AGG | + | chr3_1:2553310-2553329 | None:intergenic | 45.0% | |
| GCCAAATTTGTGACACCTTC+AGG | + | chr3_1:2553349-2553368 | None:intergenic | 45.0% | |
| ! | TATAAGCGGATTCGGATGGA+AGG | - | chr3_1:2553379-2553398 | Msa0343990:intron | 45.0% |
| GTATGTGGAAGACATAGCTG+AGG | - | chr3_1:2553483-2553502 | Msa0343990:intron | 45.0% | |
| ATAGCTGAGGGTCTTGAGAA+TGG | - | chr3_1:2553496-2553515 | Msa0343990:intron | 45.0% | |
| !! | GCTTTGGTTGGTCTGTTTAG+TGG | - | chr3_1:2553526-2553545 | Msa0343990:intron | 45.0% |
| AGCACTCTTTGGATGACCTT+TGG | - | chr3_1:2553679-2553698 | Msa0343990:intron | 45.0% | |
| TGACACAATTCCTGAGATGG+CGG | - | chr3_1:2554316-2554335 | Msa0343990:intron | 45.0% | |
| ACAACATCGTTGGAACCTTG+TGG | + | chr3_1:2554440-2554459 | None:intergenic | 45.0% | |
| GTCATCAGGAGTCTCATGTA+AGG | + | chr3_1:2554494-2554513 | None:intergenic | 45.0% | |
| TGTTTGAGTACAGGTATGCC+GGG | - | chr3_1:2552369-2552388 | Msa0343990:intron | 45.0% | |
| ! | GCGAACAAAGACATGGATTG+TGG | + | chr3_1:2555282-2555301 | None:intergenic | 45.0% |
| TCACCAAGCGAACAAAGACA+TGG | + | chr3_1:2555289-2555308 | None:intergenic | 45.0% | |
| TGCAAGTGACTGTGTTGTGA+TGG | + | chr3_1:2555604-2555623 | None:intergenic | 45.0% | |
| GCCAAATTTGTGACACCTTC+AGG | + | chr3_1:2553349-2553368 | None:intergenic | 45.0% | |
| GTATGTGGAAGACATAGCTG+AGG | - | chr3_1:2553483-2553502 | Msa0343990:intron | 45.0% | |
| ATAGCTGAGGGTCTTGAGAA+TGG | - | chr3_1:2553496-2553515 | Msa0343990:intron | 45.0% | |
| ! | AATGGTCCTGCTGCATTGAT+TGG | - | chr3_1:2556085-2556104 | Msa0343990:CDS | 45.0% |
| TATAGGCCAATCAATGCAGC+AGG | + | chr3_1:2556094-2556113 | None:intergenic | 45.0% | |
| !! | GCATTGATTGGCCTATACAG+TGG | - | chr3_1:2556097-2556116 | Msa0343990:CDS | 45.0% |
| CAACATTGCGACCACTGTAT+AGG | + | chr3_1:2556111-2556130 | None:intergenic | 45.0% | |
| CTATACAGTGGTCGCAATGT+TGG | - | chr3_1:2556109-2556128 | Msa0343990:CDS | 45.0% | |
| TCGCAATGTTGGCAAACAAG+TGG | - | chr3_1:2556120-2556139 | Msa0343990:CDS | 45.0% | |
| GTGGATGAAGAGGTTTCCAA+AGG | + | chr3_1:2556267-2556286 | None:intergenic | 45.0% | |
| !!! | AAAAATACTATTTTAAATTT+TGG | - | chr3_1:2552740-2552759 | Msa0343990:intron | 5.0% |
| ! | CAAGAGTTGGTTGAGTCGTG+TGG | + | chr3_1:2544669-2544688 | None:intergenic | 50.0% |
| TCTGAGAATCCTGATGGCCA+AGG | - | chr3_1:2544929-2544948 | Msa0343990:intron | 50.0% | |
| CAATAGTGTCCTTGGCCATC+AGG | + | chr3_1:2544941-2544960 | None:intergenic | 50.0% | |
| ATGGCCAAGGACACTATTGC+AGG | - | chr3_1:2544942-2544961 | Msa0343990:intron | 50.0% | |
| GACACTATTGCAGGACTTGG+TGG | - | chr3_1:2544951-2544970 | Msa0343990:intron | 50.0% | |
| !! | TTGGCATGTGGTGTTGGTTC+AGG | - | chr3_1:2545235-2545254 | Msa0343990:intron | 50.0% |
| !!! | TCCCTCGGTGTCAATTTTGG+TGG | - | chr3_1:2545290-2545309 | Msa0343990:intron | 50.0% |
| CCCACCAAAATTGACACCGA+GGG | + | chr3_1:2545294-2545313 | None:intergenic | 50.0% | |
| !!! | CCCTCGGTGTCAATTTTGGT+GGG | - | chr3_1:2545291-2545310 | Msa0343990:intron | 50.0% |
| ! | GAATGATCTAGTTCGTGCGC+CGG | + | chr3_1:2545350-2545369 | None:intergenic | 50.0% |
| TACTATGACCCGTACGCCAT+AGG | - | chr3_1:2546193-2546212 | Msa0343990:intron | 50.0% | |
| ! | TAGCTAGTGGCTTGGAGTTG+GGG | + | chr3_1:2547431-2547450 | None:intergenic | 50.0% |
| TTTAGAAAGGAAGGGGCGGT+TGG | - | chr3_1:2547722-2547741 | Msa0343990:CDS | 50.0% | |
| !! | GCGGTTGGCTTCTAAAATGG+AGG | - | chr3_1:2547737-2547756 | Msa0343990:CDS | 50.0% |
| ATTGAGAGAGGGAGCCGATA+TGG | - | chr3_1:2547878-2547897 | Msa0343990:intron | 50.0% | |
| TCGCGTACTTCATTCCTCCA+AGG | - | chr3_1:2548494-2548513 | Msa0343990:CDS | 50.0% | |
| AGAGCTGAATAGGACCTTGG+AGG | + | chr3_1:2548511-2548530 | None:intergenic | 50.0% | |
| CTGAGAGCTGAATAGGACCT+TGG | + | chr3_1:2548514-2548533 | None:intergenic | 50.0% | |
| GCTCAGCCAGACATGACATT+TGG | - | chr3_1:2548575-2548594 | Msa0343990:CDS | 50.0% | |
| ! | GTCGATTCAGATCGTGCCTT+GGG | + | chr3_1:2548653-2548672 | None:intergenic | 50.0% |
| ! | GAATGATCTAGTTCGTGCGC+CGG | + | chr3_1:2545350-2545369 | None:intergenic | 50.0% |
| TACTATGACCCGTACGCCAT+AGG | - | chr3_1:2546193-2546212 | Msa0343990:intron | 50.0% | |
| ! | TAGCTAGTGGCTTGGAGTTG+GGG | + | chr3_1:2547431-2547450 | None:intergenic | 50.0% |
| TTTAGAAAGGAAGGGGCGGT+TGG | - | chr3_1:2547722-2547741 | Msa0343990:CDS | 50.0% | |
| !! | GCGGTTGGCTTCTAAAATGG+AGG | - | chr3_1:2547737-2547756 | Msa0343990:CDS | 50.0% |
| ATTGAGAGAGGGAGCCGATA+TGG | - | chr3_1:2547878-2547897 | Msa0343990:intron | 50.0% | |
| GTCCCGCTTTCCTACTATAC+TGG | - | chr3_1:2552250-2552269 | Msa0343990:intron | 50.0% | |
| CCAGCATAAGCAGTCATTCC+CGG | + | chr3_1:2552390-2552409 | None:intergenic | 50.0% | |
| AAGTTGACCAACAGCACCAG+AGG | + | chr3_1:2552466-2552485 | None:intergenic | 50.0% | |
| !! | GGTGCTGTTGGTCAACTTGT+TGG | - | chr3_1:2552468-2552487 | Msa0343990:intron | 50.0% |
| ACAGACCAACCAAAGCTGCA+GGG | + | chr3_1:2553522-2553541 | None:intergenic | 50.0% | |
| AACAGACCAACCAAAGCTGC+AGG | + | chr3_1:2553523-2553542 | None:intergenic | 50.0% | |
| ! | CTTGTGCATGGAGCACTCTT+TGG | - | chr3_1:2553668-2553687 | Msa0343990:intron | 50.0% |
| CATCGTTGGAACCTTGTGGA+AGG | + | chr3_1:2554436-2554455 | None:intergenic | 50.0% | |
| CATGAGACTCCTGATGACCA+AGG | - | chr3_1:2554496-2554515 | Msa0343990:intron | 50.0% | |
| CAGTAGTGTCCTTGGTCATC+AGG | + | chr3_1:2554508-2554527 | None:intergenic | 50.0% | |
| ATGACCAAGGACACTACTGC+AGG | - | chr3_1:2554509-2554528 | Msa0343990:intron | 50.0% | |
| AAGTCCTGCAGTAGTGTCCT+TGG | + | chr3_1:2554516-2554535 | None:intergenic | 50.0% | |
| AAGGACACTACTGCAGGACT+TGG | - | chr3_1:2554515-2554534 | Msa0343990:intron | 50.0% | |
| AGCATGGCATACAGAACCAG+GGG | + | chr3_1:2554549-2554568 | None:intergenic | 50.0% | |
| GAGCATGGCATACAGAACCA+GGG | + | chr3_1:2554550-2554569 | None:intergenic | 50.0% | |
| AGAGCATGGCATACAGAACC+AGG | + | chr3_1:2554551-2554570 | None:intergenic | 50.0% | |
| GAGTAATTGCAGCCACTGAC+AGG | - | chr3_1:2554689-2554708 | Msa0343990:intron | 50.0% | |
| ! | TTGCAGCCACTGACAGGTTT+TGG | - | chr3_1:2554695-2554714 | Msa0343990:intron | 50.0% |
| GACACTCCAAAACCTGTCAG+TGG | + | chr3_1:2554704-2554723 | None:intergenic | 50.0% | |
| CCAGCATATGCAGTCATTCC+CGG | + | chr3_1:2554989-2555008 | None:intergenic | 50.0% | |
| !! | GGTGCTGTTGGTCAACTTGT+TGG | - | chr3_1:2552468-2552487 | Msa0343990:intron | 50.0% |
| !! | AACCCACTTGGGTTGGCATG+TGG | - | chr3_1:2545223-2545242 | Msa0343990:intron | 55.0% |
| CACCACATGCCAACCCAAGT+GGG | + | chr3_1:2545228-2545247 | None:intergenic | 55.0% | |
| ACACCACATGCCAACCCAAG+TGG | + | chr3_1:2545229-2545248 | None:intergenic | 55.0% | |
| !! | CTTGGGTTGGCATGTGGTGT+TGG | - | chr3_1:2545229-2545248 | Msa0343990:intron | 55.0% |
| GCCCACCAAAATTGACACCG+AGG | + | chr3_1:2545295-2545314 | None:intergenic | 55.0% | |
| !! | GGGGCGGTTGGCTTCTAAAA+TGG | - | chr3_1:2547734-2547753 | Msa0343990:CDS | 55.0% |
| CAGATCGTGCCTTGGGTCAA+TGG | + | chr3_1:2548646-2548665 | None:intergenic | 55.0% | |
| ! | GGTCGATTCAGATCGTGCCT+TGG | + | chr3_1:2548654-2548673 | None:intergenic | 55.0% |
| !! | GGGGCGGTTGGCTTCTAAAA+TGG | - | chr3_1:2547734-2547753 | Msa0343990:CDS | 55.0% |
| TTAAACGAGCCCCCTGCAAG+TGG | - | chr3_1:2551453-2551472 | Msa0343990:intron | 55.0% | |
| AACCCCATCGTCCACTTGCA+GGG | + | chr3_1:2551467-2551486 | None:intergenic | 55.0% | |
| CCGGGAATGACTGCTTATGC+TGG | - | chr3_1:2552387-2552406 | Msa0343990:intron | 55.0% | |
| !! | TCATCTGCCTCTGGTGCTGT+TGG | - | chr3_1:2552456-2552475 | Msa0343990:intron | 55.0% |
| TGTCGGACACCAACACGTGT+TGG | + | chr3_1:2553016-2553035 | None:intergenic | 55.0% | |
| TGAGAATGGCCCTGCAGCTT+TGG | - | chr3_1:2553510-2553529 | Msa0343990:intron | 55.0% | |
| ! | AATGGCCCTGCAGCTTTGGT+TGG | - | chr3_1:2553514-2553533 | Msa0343990:intron | 55.0% |
| !! | TTCCTGAGATGGCGGAAGTG+AGG | - | chr3_1:2554324-2554343 | Msa0343990:intron | 55.0% |
| TTCCTCACTTCCGCCATCTC+AGG | + | chr3_1:2554329-2554348 | None:intergenic | 55.0% | |
| CCGGGAATGACTGCATATGC+TGG | - | chr3_1:2554986-2555005 | Msa0343990:intron | 55.0% | |
| !! | TCAGCTGCATCTGGTGCTGT+TGG | - | chr3_1:2555055-2555074 | Msa0343990:intron | 55.0% |
| CACTTACAGGTATGCGGCCA+TGG | + | chr3_1:2555868-2555887 | None:intergenic | 55.0% | |
| CATGGCCGCATACCTGTAAG+TGG | - | chr3_1:2555866-2555885 | Msa0343990:intron | 55.0% | |
| ACCCCATCGTCCACTTGCAG+GGG | + | chr3_1:2551466-2551485 | None:intergenic | 60.0% | |
| CAACCCCATCGTCCACTTGC+AGG | + | chr3_1:2551468-2551487 | None:intergenic | 60.0% | |
| CTGCAAGTGGACGATGGGGT+TGG | - | chr3_1:2551466-2551485 | Msa0343990:intron | 60.0% | |
| CACACACAGGTATGCGCCCA+TGG | + | chr3_1:2553297-2553316 | None:intergenic | 60.0% | |
| CATGGGCGCATACCTGTGTG+TGG | - | chr3_1:2553295-2553314 | Msa0343990:intron | 60.0% | |
| !! | GGACTTGGTGGTCTCACCCC+TGG | - | chr3_1:2544963-2544982 | Msa0343990:intron | 65.0% |
| AGCCCCCTGCAAGTGGACGA+TGG | - | chr3_1:2551460-2551479 | Msa0343990:intron | 65.0% | |
| GCCCCCTGCAAGTGGACGAT+GGG | - | chr3_1:2551461-2551480 | Msa0343990:intron | 65.0% | |
| CCCCATCGTCCACTTGCAGG+GGG | + | chr3_1:2551465-2551484 | None:intergenic | 65.0% | |
| CCCCCTGCAAGTGGACGATG+GGG | - | chr3_1:2551462-2551481 | Msa0343990:intron | 65.0% | |
| !! | GGACTTGGTGCTCTCACCCC+TGG | - | chr3_1:2554530-2554549 | Msa0343990:intron | 65.0% |
| AGAGTGGCGCAGCGGAAGCG+TGG | + | chr3_1:2548222-2548241 | None:intergenic | 70.0% | |
| ! | CGCAGCGGAAGCGTGGTGGC+TGG | + | chr3_1:2548215-2548234 | None:intergenic | 75.0% |
| ! | GTGGCGCAGCGGAAGCGTGG+TGG | + | chr3_1:2548219-2548238 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 2544648 | 2556345 | 2544648 | ID=Msa0343990;Name=Msa0343990 |
| chr3_1 | mRNA | 2544648 | 2556345 | 2544648 | ID=Msa0343990-mRNA-1;Parent=Msa0343990;Name=Msa0343990-mRNA-1;_AED=0.38;_eAED=0.38;_QI=117|1|1|1|0.8|0.66|6|240|343 |
| chr3_1 | exon | 2544648 | 2544668 | 2544648 | ID=Msa0343990-mRNA-1:exon:775;Parent=Msa0343990-mRNA-1 |
| chr3_1 | exon | 2547183 | 2547780 | 2547183 | ID=Msa0343990-mRNA-1:exon:774;Parent=Msa0343990-mRNA-1 |
| chr3_1 | exon | 2548081 | 2548163 | 2548081 | ID=Msa0343990-mRNA-1:exon:773;Parent=Msa0343990-mRNA-1 |
| chr3_1 | exon | 2548445 | 2548611 | 2548445 | ID=Msa0343990-mRNA-1:exon:772;Parent=Msa0343990-mRNA-1 |
| chr3_1 | exon | 2548713 | 2548890 | 2548713 | ID=Msa0343990-mRNA-1:exon:771;Parent=Msa0343990-mRNA-1 |
| chr3_1 | exon | 2556004 | 2556345 | 2556004 | ID=Msa0343990-mRNA-1:exon:770;Parent=Msa0343990-mRNA-1 |
| chr3_1 | five_prime_UTR | 2556229 | 2556345 | 2556229 | ID=Msa0343990-mRNA-1:five_prime_utr;Parent=Msa0343990-mRNA-1 |
| chr3_1 | CDS | 2556004 | 2556228 | 2556004 | ID=Msa0343990-mRNA-1:cds;Parent=Msa0343990-mRNA-1 |
| chr3_1 | CDS | 2548713 | 2548890 | 2548713 | ID=Msa0343990-mRNA-1:cds;Parent=Msa0343990-mRNA-1 |
| chr3_1 | CDS | 2548445 | 2548611 | 2548445 | ID=Msa0343990-mRNA-1:cds;Parent=Msa0343990-mRNA-1 |
| chr3_1 | CDS | 2548081 | 2548163 | 2548081 | ID=Msa0343990-mRNA-1:cds;Parent=Msa0343990-mRNA-1 |
| chr3_1 | CDS | 2547402 | 2547780 | 2547402 | ID=Msa0343990-mRNA-1:cds;Parent=Msa0343990-mRNA-1 |
| chr3_1 | three_prime_UTR | 2547183 | 2547401 | 2547183 | ID=Msa0343990-mRNA-1:three_prime_utr;Parent=Msa0343990-mRNA-1 |
| chr3_1 | three_prime_UTR | 2544648 | 2544668 | 2544648 | ID=Msa0343990-mRNA-1:three_prime_utr;Parent=Msa0343990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
