Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0264240 | XP_013442989.1 | 82.609 | 184 | 8 | 2 | 1 | 164 | 1 | 180 | 1.43e-90 | 290 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0264240 | sp|Q9MA15|AB1K3_ARATH | 55.856 | 111 | 29 | 1 | 74 | 164 | 77 | 187 | 2.71e-31 | 123 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0264240 | A0A072THI5 | 82.609 | 184 | 8 | 2 | 1 | 164 | 1 | 180 | 6.85e-91 | 290 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0013040 | Msa0264240 | -0.802324 | 5.922085e-49 | -8.615850e-47 |
Msa0016440 | Msa0264240 | -0.821237 | 4.491479e-53 | -8.615850e-47 |
Msa0017420 | Msa0264240 | 0.813410 | 2.596737e-51 | -8.615850e-47 |
Msa0021980 | Msa0264240 | 0.868677 | 5.466713e-66 | -8.615850e-47 |
Msa0025690 | Msa0264240 | 0.853064 | 3.059048e-61 | -8.615850e-47 |
Msa0026120 | Msa0264240 | 0.804102 | 2.537717e-49 | -8.615850e-47 |
Msa0028280 | Msa0264240 | 0.818146 | 2.282051e-52 | -8.615850e-47 |
Msa0030030 | Msa0264240 | 0.831081 | 2.043054e-55 | -8.615850e-47 |
Msa0039200 | Msa0264240 | 0.825562 | 4.379822e-54 | -8.615850e-47 |
Msa0041780 | Msa0264240 | 0.816020 | 6.856366e-52 | -8.615850e-47 |
Msa0050320 | Msa0264240 | 0.825240 | 5.221591e-54 | -8.615850e-47 |
Msa0051100 | Msa0264240 | 0.846358 | 2.283688e-59 | -8.615850e-47 |
Msa0053480 | Msa0264240 | 0.836243 | 1.048979e-56 | -8.615850e-47 |
Msa0059880 | Msa0264240 | -0.811727 | 6.059137e-51 | -8.615850e-47 |
Msa0077330 | Msa0264240 | 0.828936 | 6.812343e-55 | -8.615850e-47 |
Msa0086820 | Msa0264240 | 0.824846 | 6.470208e-54 | -8.615850e-47 |
Msa0090350 | Msa0264240 | 0.804359 | 2.243857e-49 | -8.615850e-47 |
Msa0093440 | Msa0264240 | 0.830198 | 3.360379e-55 | -8.615850e-47 |
Msa0101650 | Msa0264240 | 0.830229 | 3.302462e-55 | -8.615850e-47 |
Msa0110500 | Msa0264240 | 0.825810 | 3.825478e-54 | -8.615850e-47 |
Msa0117300 | Msa0264240 | 0.818395 | 2.004685e-52 | -8.615850e-47 |
Msa0121460 | Msa0264240 | 0.808233 | 3.424239e-50 | -8.615850e-47 |
Msa0121480 | Msa0264240 | 0.803511 | 3.366815e-49 | -8.615850e-47 |
Msa0133670 | Msa0264240 | 0.822895 | 1.854453e-53 | -8.615850e-47 |
Msa0133880 | Msa0264240 | 0.824379 | 8.335754e-54 | -8.615850e-47 |
Msa0154720 | Msa0264240 | 0.823757 | 1.166180e-53 | -8.615850e-47 |
Msa0155030 | Msa0264240 | 0.801261 | 9.789464e-49 | -8.615850e-47 |
Msa0160650 | Msa0264240 | 0.809507 | 1.828766e-50 | -8.615850e-47 |
Msa0163300 | Msa0264240 | 0.800702 | 1.273163e-48 | -8.615850e-47 |
Msa0164630 | Msa0264240 | 0.801240 | 9.884573e-49 | -8.615850e-47 |
Msa0169960 | Msa0264240 | 0.819198 | 1.317047e-52 | -8.615850e-47 |
Msa0173280 | Msa0264240 | 0.801687 | 8.006642e-49 | -8.615850e-47 |
Msa0175480 | Msa0264240 | 0.801263 | 9.776794e-49 | -8.615850e-47 |
Msa0184030 | Msa0264240 | 0.811138 | 8.134765e-51 | -8.615850e-47 |
Msa0184120 | Msa0264240 | 0.826301 | 2.924015e-54 | -8.615850e-47 |
Msa0188500 | Msa0264240 | 0.825399 | 4.788741e-54 | -8.615850e-47 |
Msa0200870 | Msa0264240 | 0.803932 | 2.753479e-49 | -8.615850e-47 |
Msa0216550 | Msa0264240 | 0.817285 | 3.569210e-52 | -8.615850e-47 |
Msa0218480 | Msa0264240 | 0.820301 | 7.375206e-53 | -8.615850e-47 |
Msa0218590 | Msa0264240 | 0.825394 | 4.800220e-54 | -8.615850e-47 |
Msa0222720 | Msa0264240 | 0.848679 | 5.256674e-60 | -8.615850e-47 |
Msa0223190 | Msa0264240 | 0.822540 | 2.243202e-53 | -8.615850e-47 |
Msa0225370 | Msa0264240 | 0.860382 | 2.147684e-63 | -8.615850e-47 |
Msa0242700 | Msa0264240 | -0.809378 | 1.949505e-50 | -8.615850e-47 |
Msa0256170 | Msa0264240 | 0.809350 | 1.976635e-50 | -8.615850e-47 |
Msa0256410 | Msa0264240 | 0.806597 | 7.614981e-50 | -8.615850e-47 |
Msa0256430 | Msa0264240 | 0.823524 | 1.322606e-53 | -8.615850e-47 |
Msa0264020 | Msa0264240 | 0.838596 | 2.617337e-57 | -8.615850e-47 |
Msa0264240 | Msa0264420 | 0.839765 | 1.302884e-57 | -8.615850e-47 |
Msa0264240 | Msa0266380 | 0.863904 | 1.784080e-64 | -8.615850e-47 |
Msa0264240 | Msa0295850 | 0.828304 | 9.682972e-55 | -8.615850e-47 |
Msa0264240 | Msa0302310 | 0.828591 | 8.257598e-55 | -8.615850e-47 |
Msa0264240 | Msa0305580 | 0.841323 | 5.095484e-58 | -8.615850e-47 |
Msa0264240 | Msa0311330 | 0.802770 | 4.791951e-49 | -8.615850e-47 |
Msa0264240 | Msa0331740 | 0.805461 | 1.320164e-49 | -8.615850e-47 |
Msa0264240 | Msa0339340 | 0.807522 | 4.851457e-50 | -8.615850e-47 |
Msa0264240 | Msa0339560 | 0.971468 | 3.277684e-133 | -8.615850e-47 |
Msa0264240 | Msa0339670 | 0.835703 | 1.437684e-56 | -8.615850e-47 |
Msa0264240 | Msa0341520 | 0.834102 | 3.639930e-56 | -8.615850e-47 |
Msa0264240 | Msa0341860 | 0.857077 | 2.086910e-62 | -8.615850e-47 |
Msa0264240 | Msa0343990 | 0.826089 | 3.284356e-54 | -8.615850e-47 |
Msa0264240 | Msa0358720 | 0.816417 | 5.590359e-52 | -8.615850e-47 |
Msa0264240 | Msa0362430 | 0.805983 | 1.025454e-49 | -8.615850e-47 |
Msa0264240 | Msa0364010 | 0.822748 | 2.006311e-53 | -8.615850e-47 |
Msa0264240 | Msa0372990 | 0.812196 | 4.788388e-51 | -8.615850e-47 |
Msa0264240 | Msa0378620 | 0.806201 | 9.226451e-50 | -8.615850e-47 |
Msa0264240 | Msa0379500 | 0.850668 | 1.462848e-60 | -8.615850e-47 |
Msa0264240 | Msa0401570 | 0.841219 | 5.425461e-58 | -8.615850e-47 |
Msa0264240 | Msa0404180 | 0.842554 | 2.408677e-58 | -8.615850e-47 |
Msa0264240 | Msa0408160 | 0.848654 | 5.340091e-60 | -8.615850e-47 |
Msa0264240 | Msa0410960 | 0.803037 | 4.220779e-49 | -8.615850e-47 |
Msa0264240 | Msa0421390 | 0.831675 | 1.459013e-55 | -8.615850e-47 |
Msa0264240 | Msa0431940 | 0.808488 | 3.022336e-50 | -8.615850e-47 |
Msa0264240 | Msa0436600 | 0.808802 | 2.590007e-50 | -8.615850e-47 |
Msa0264240 | Msa0448400 | 0.801919 | 7.174974e-49 | -8.615850e-47 |
Msa0264240 | Msa0454940 | 0.831427 | 1.679757e-55 | -8.615850e-47 |
Msa0264240 | Msa0456480 | 0.813259 | 2.801857e-51 | -8.615850e-47 |
Msa0264240 | Msa0463960 | 0.817177 | 3.775018e-52 | -8.615850e-47 |
Msa0264240 | Msa0473450 | 0.800435 | 1.443565e-48 | -8.615850e-47 |
Msa0264240 | Msa0475360 | 0.824984 | 6.001276e-54 | -8.615850e-47 |
Msa0264240 | Msa0476730 | 0.807419 | 5.101101e-50 | -8.615850e-47 |
Msa0264240 | Msa0496460 | 0.835194 | 1.933597e-56 | -8.615850e-47 |
Msa0264240 | Msa0496470 | 0.814149 | 1.784536e-51 | -8.615850e-47 |
Msa0264240 | Msa0496570 | 0.801112 | 1.049893e-48 | -8.615850e-47 |
Msa0264240 | Msa0502910 | 0.811759 | 5.962226e-51 | -8.615850e-47 |
Msa0264240 | Msa0509510 | 0.818822 | 1.603477e-52 | -8.615850e-47 |
Msa0264240 | Msa0520810 | 0.822805 | 1.946266e-53 | -8.615850e-47 |
Msa0264240 | Msa0521100 | 0.848504 | 5.876996e-60 | -8.615850e-47 |
Msa0264240 | Msa0534380 | 0.804828 | 1.790610e-49 | -8.615850e-47 |
Msa0264240 | Msa0540160 | 0.825989 | 3.470050e-54 | -8.615850e-47 |
Msa0264240 | Msa0544930 | 0.843665 | 1.218319e-58 | -8.615850e-47 |
Msa0264240 | Msa0546370 | 0.821736 | 3.445959e-53 | -8.615850e-47 |
Msa0264240 | Msa0560370 | 0.810034 | 1.408938e-50 | -8.615850e-47 |
Msa0264240 | Msa0568490 | 0.822791 | 1.960912e-53 | -8.615850e-47 |
Msa0264240 | Msa0589540 | 0.826518 | 2.596872e-54 | -8.615850e-47 |
Msa0264240 | Msa0618260 | 0.801823 | 7.507246e-49 | -8.615850e-47 |
Msa0264240 | Msa0623360 | 0.862160 | 6.167564e-64 | -8.615850e-47 |
Msa0264240 | Msa0639030 | 0.809641 | 1.711682e-50 | -8.615850e-47 |
Msa0264240 | Msa0641020 | 0.821177 | 4.638953e-53 | -8.615850e-47 |
Msa0264240 | Msa0641030 | 0.837995 | 3.739551e-57 | -8.615850e-47 |
Msa0264240 | Msa0643020 | -0.800429 | 1.447443e-48 | -8.615850e-47 |
Msa0264240 | Msa0648200 | 0.809435 | 1.894560e-50 | -8.615850e-47 |
Msa0264240 | Msa0656270 | 0.802540 | 5.343925e-49 | -8.615850e-47 |
Msa0264240 | Msa0668000 | 0.806173 | 9.352461e-50 | -8.615850e-47 |
Msa0264240 | Msa0679560 | 0.817449 | 3.278192e-52 | -8.615850e-47 |
Msa0264240 | Msa0681880 | 0.804822 | 1.796086e-49 | -8.615850e-47 |
Msa0264240 | Msa0687320 | 0.837913 | 3.926469e-57 | -8.615850e-47 |
Msa0264240 | Msa0691140 | 0.833568 | 4.949513e-56 | -8.615850e-47 |
Msa0264240 | Msa0697600 | 0.811016 | 8.642771e-51 | -8.615850e-47 |
Msa0264240 | Msa0733400 | 0.825264 | 5.152696e-54 | -8.615850e-47 |
Msa0264240 | Msa0733670 | -0.815638 | 8.342297e-52 | -8.615850e-47 |
Msa0264240 | Msa0741600 | 0.821003 | 5.087325e-53 | -8.615850e-47 |
Msa0264240 | Msa0748050 | 0.810100 | 1.363025e-50 | -8.615850e-47 |
Msa0264240 | Msa0756410 | 0.821087 | 4.865092e-53 | -8.615850e-47 |
Msa0264240 | Msa0756440 | 0.822394 | 2.425699e-53 | -8.615850e-47 |
Msa0264240 | Msa0774450 | 0.802394 | 5.727415e-49 | -8.615850e-47 |
Msa0264240 | Msa0775420 | 0.847428 | 1.163869e-59 | -8.615850e-47 |
Msa0264240 | Msa0778580 | 0.821163 | 4.673521e-53 | -8.615850e-47 |
Msa0264240 | Msa0796460 | 0.803172 | 3.957236e-49 | -8.615850e-47 |
Msa0264240 | Msa0796610 | 0.821508 | 3.889405e-53 | -8.615850e-47 |
Msa0264240 | Msa0797240 | 0.801878 | 7.314200e-49 | -8.615850e-47 |
Msa0264240 | Msa0804340 | 0.816058 | 6.724987e-52 | -8.615850e-47 |
Msa0264240 | Msa0807980 | 0.842702 | 2.200977e-58 | -8.615850e-47 |
Msa0264240 | Msa0811940 | 0.804476 | 2.121579e-49 | -8.615850e-47 |
Msa0264240 | Msa0812800 | 0.827740 | 1.324059e-54 | -8.615850e-47 |
Msa0264240 | Msa0813630 | 0.801906 | 7.218368e-49 | -8.615850e-47 |
Msa0264240 | Msa0815950 | 0.847112 | 1.420869e-59 | -8.615850e-47 |
Msa0264240 | Msa0819670 | 0.813187 | 2.905620e-51 | -8.615850e-47 |
Msa0264240 | Msa0833910 | 0.826776 | 2.253515e-54 | -8.615850e-47 |
Msa0264240 | Msa0834160 | 0.828840 | 7.188328e-55 | -8.615850e-47 |
Msa0264240 | Msa0834200 | 0.821031 | 5.011750e-53 | -8.615850e-47 |
Msa0264240 | Msa0834240 | 0.839179 | 1.849208e-57 | -8.615850e-47 |
Msa0264240 | Msa0835550 | 0.846342 | 2.307541e-59 | -8.615850e-47 |
Msa0264240 | Msa0835580 | 0.803607 | 3.215951e-49 | -8.615850e-47 |
Msa0264240 | Msa0839730 | 0.805665 | 1.196064e-49 | -8.615850e-47 |
Msa0264240 | Msa0846300 | 0.802913 | 4.475886e-49 | -8.615850e-47 |
Msa0264240 | Msa0853150 | 0.801646 | 8.160916e-49 | -8.615850e-47 |
Msa0264240 | Msa0859950 | 0.810594 | 1.066624e-50 | -8.615850e-47 |
Msa0264240 | Msa0861560 | 0.804467 | 2.129821e-49 | -8.615850e-47 |
Msa0264240 | Msa0868040 | 0.826095 | 3.274209e-54 | -8.615850e-47 |
Msa0264240 | Msa0871310 | 0.816432 | 5.546455e-52 | -8.615850e-47 |
Msa0264240 | Msa0883390 | 0.814078 | 1.850383e-51 | -8.615850e-47 |
Msa0264240 | Msa0883410 | 0.833177 | 6.193867e-56 | -8.615850e-47 |
Msa0264240 | Msa0883430 | 0.817980 | 2.489016e-52 | -8.615850e-47 |
Msa0264240 | Msa0883660 | 0.833263 | 5.897714e-56 | -8.615850e-47 |
Msa0264240 | Msa0883670 | 0.842852 | 2.008011e-58 | -8.615850e-47 |
Msa0264240 | Msa0883690 | 0.839620 | 1.421214e-57 | -8.615850e-47 |
Msa0264240 | Msa0883700 | 0.858658 | 7.082655e-63 | -8.615850e-47 |
Msa0264240 | Msa0887000 | 0.818984 | 1.473391e-52 | -8.615850e-47 |
Msa0264240 | Msa0887070 | 0.802502 | 5.441852e-49 | -8.615850e-47 |
Msa0264240 | Msa0895860 | 0.809536 | 1.802815e-50 | -8.615850e-47 |
Msa0264240 | Msa0902340 | -0.805028 | 1.627014e-49 | -8.615850e-47 |
Msa0264240 | Msa0910830 | -0.800292 | 1.543180e-48 | -8.615850e-47 |
Msa0264240 | Msa0912160 | 0.800872 | 1.175635e-48 | -8.615850e-47 |
Msa0264240 | Msa0932930 | -0.800319 | 1.524251e-48 | -8.615850e-47 |
Msa0264240 | Msa0950410 | 0.829144 | 6.067100e-55 | -8.615850e-47 |
Msa0264240 | Msa0957800 | 0.827051 | 1.936738e-54 | -8.615850e-47 |
Msa0264240 | Msa0984820 | 0.836835 | 7.411343e-57 | -8.615850e-47 |
Msa0264240 | Msa0984830 | 0.804858 | 1.765126e-49 | -8.615850e-47 |
Msa0264240 | Msa0984840 | 0.833394 | 5.470908e-56 | -8.615850e-47 |
Msa0264240 | Msa0984850 | 0.832400 | 9.661520e-56 | -8.615850e-47 |
Msa0264240 | Msa0984860 | 0.818773 | 1.645106e-52 | -8.615850e-47 |
Msa0264240 | Msa0985040 | 0.843180 | 1.642299e-58 | -8.615850e-47 |
Msa0264240 | Msa0986560 | 0.834180 | 3.478380e-56 | -8.615850e-47 |
Msa0264240 | Msa0988500 | 0.814819 | 1.268789e-51 | -8.615850e-47 |
Msa0264240 | Msa0999590 | 0.814597 | 1.420596e-51 | -8.615850e-47 |
Msa0264240 | Msa1014120 | 0.832676 | 8.253537e-56 | -8.615850e-47 |
Msa0264240 | Msa1016130 | 0.840871 | 6.694906e-58 | -8.615850e-47 |
Msa0264240 | Msa1038110 | 0.801847 | 7.420656e-49 | -8.615850e-47 |
Msa0264240 | Msa1041550 | 0.866490 | 2.743943e-65 | -8.615850e-47 |
Msa0264240 | Msa1052080 | 0.806016 | 1.009162e-49 | -8.615850e-47 |
Msa0264240 | Msa1055710 | 0.848246 | 6.924787e-60 | -8.615850e-47 |
Msa0264240 | Msa1071310 | 0.800197 | 1.613242e-48 | -8.615850e-47 |
Msa0264240 | Msa1072640 | 0.812767 | 3.591574e-51 | -8.615850e-47 |
Msa0264240 | Msa1080790 | 0.811593 | 6.477501e-51 | -8.615850e-47 |
Msa0264240 | Msa1081530 | 0.885706 | 6.451417e-72 | -8.615850e-47 |
Msa0264240 | Msa1102180 | 0.821707 | 3.498366e-53 | -8.615850e-47 |
Msa0264240 | Msa1109880 | -0.802320 | 5.932835e-49 | -8.615850e-47 |
Msa0264240 | Msa1109890 | -0.807450 | 5.023955e-50 | -8.615850e-47 |
Msa0264240 | Msa1117830 | 0.813363 | 2.658167e-51 | -8.615850e-47 |
Msa0264240 | Msa1118930 | 0.812683 | 3.748012e-51 | -8.615850e-47 |
Msa0264240 | Msa1125450 | 0.802209 | 6.253103e-49 | -8.615850e-47 |
Msa0264240 | Msa1152280 | 0.802229 | 6.193125e-49 | -8.615850e-47 |
Msa0264240 | Msa1161520 | 0.814337 | 1.621553e-51 | -8.615850e-47 |
Msa0264240 | Msa1164830 | 0.804152 | 2.477166e-49 | -8.615850e-47 |
Msa0264240 | Msa1166450 | 0.848345 | 6.504633e-60 | -8.615850e-47 |
Msa0264240 | Msa1178980 | 0.802615 | 5.158813e-49 | -8.615850e-47 |
Msa0264240 | Msa1182400 | 0.852711 | 3.858595e-61 | -8.615850e-47 |
Msa0264240 | Msa1186010 | 0.804928 | 1.707178e-49 | -8.615850e-47 |
Msa0264240 | Msa1188820 | 0.854977 | 8.592731e-62 | -8.615850e-47 |
Msa0264240 | Msa1191390 | 0.808147 | 3.572125e-50 | -8.615850e-47 |
Msa0264240 | Msa1199750 | 0.848557 | 5.681978e-60 | -8.615850e-47 |
Msa0264240 | Msa1204110 | 0.808909 | 2.456359e-50 | -8.615850e-47 |
Msa0264240 | Msa1207760 | 0.819441 | 1.159525e-52 | -8.615850e-47 |
Msa0264240 | Msa1208250 | 0.805632 | 1.215191e-49 | -8.615850e-47 |
Msa0264240 | Msa1211390 | 0.802425 | 5.646031e-49 | -8.615850e-47 |
Msa0264240 | Msa1212740 | 0.810067 | 1.385946e-50 | -8.615850e-47 |
Msa0264240 | Msa1215660 | 0.815077 | 1.111968e-51 | -8.615850e-47 |
Msa0264240 | Msa1216700 | 0.829025 | 6.485037e-55 | -8.615850e-47 |
Msa0264240 | Msa1216900 | 0.801601 | 8.335362e-49 | -8.615850e-47 |
Msa0264240 | Msa1223510 | 0.817580 | 3.063156e-52 | -8.615850e-47 |
Msa0264240 | Msa1228280 | 0.806029 | 1.003201e-49 | -8.615850e-47 |
Msa0264240 | Msa1228330 | 0.811302 | 7.492780e-51 | -8.615850e-47 |
Msa0264240 | Msa1229770 | 0.844479 | 7.368874e-59 | -8.615850e-47 |
Msa0264240 | Msa1230190 | 0.848053 | 7.829073e-60 | -8.615850e-47 |
Msa0264240 | Msa1233760 | 0.843866 | 1.076226e-58 | -8.615850e-47 |
Msa0264240 | Msa1237260 | 0.821709 | 3.495667e-53 | -8.615850e-47 |
Msa0264240 | Msa1240060 | -0.801661 | 8.103382e-49 | -8.615850e-47 |
Msa0264240 | Msa1242430 | 0.814474 | 1.512310e-51 | -8.615850e-47 |
Msa0264240 | Msa1242990 | 0.820381 | 7.068529e-53 | -8.615850e-47 |
Msa0264240 | Msa1257930 | 0.801780 | 7.662155e-49 | -8.615850e-47 |
Msa0264240 | Msa1262740 | 0.820605 | 6.280701e-53 | -8.615850e-47 |
Msa0264240 | Msa1263610 | 0.857183 | 1.941790e-62 | -8.615850e-47 |
Msa0264240 | Msa1266720 | 0.804437 | 2.161240e-49 | -8.615850e-47 |
Msa0264240 | Msa1272770 | 0.806944 | 6.432187e-50 | -8.615850e-47 |
Msa0264240 | Msa1276070 | 0.867484 | 1.322995e-65 | -8.615850e-47 |
Msa0264240 | Msa1279310 | 0.835842 | 1.325595e-56 | -8.615850e-47 |
Msa0264240 | Msa1279320 | 0.821046 | 4.971374e-53 | -8.615850e-47 |
Msa0264240 | Msa1279870 | 0.802501 | 5.445574e-49 | -8.615850e-47 |
Msa0264240 | Msa1282210 | 0.812920 | 3.325620e-51 | -8.615850e-47 |
Msa0264240 | Msa1287160 | 0.830800 | 2.394269e-55 | -8.615850e-47 |
Msa0264240 | Msa1287340 | 0.823433 | 1.388572e-53 | -8.615850e-47 |
Msa0264240 | Msa1287640 | 0.809124 | 2.209404e-50 | -8.615850e-47 |
Msa0264240 | Msa1297540 | 0.826705 | 2.343132e-54 | -8.615850e-47 |
Msa0264240 | Msa1307800 | 0.806112 | 9.636129e-50 | -8.615850e-47 |
Msa0264240 | Msa1317710 | 0.800432 | 1.445525e-48 | -8.615850e-47 |
Msa0264240 | Msa1320530 | -0.806257 | 8.982306e-50 | -8.615850e-47 |
Msa0264240 | Msa1323920 | 0.809400 | 1.927932e-50 | -8.615850e-47 |
Msa0264240 | Msa1328600 | 0.844464 | 7.440905e-59 | -8.615850e-47 |
Msa0264240 | Msa1329660 | 0.820361 | 7.142512e-53 | -8.615850e-47 |
Msa0264240 | Msa1333430 | 0.816087 | 6.626494e-52 | -8.615850e-47 |
Msa0264240 | Msa1342400 | 0.841436 | 4.758318e-58 | -8.615850e-47 |
Msa0264240 | Msa1344680 | -0.806629 | 7.498515e-50 | -8.615850e-47 |
Msa0264240 | Msa1352060 | 0.812169 | 4.853864e-51 | -8.615850e-47 |
Msa0264240 | Msa1353280 | 0.811054 | 8.479885e-51 | -8.615850e-47 |
Msa0264240 | Msa1357380 | 0.808785 | 2.611466e-50 | -8.615850e-47 |
Msa0264240 | Msa1357720 | 0.886051 | 4.786280e-72 | -8.615850e-47 |
Msa0264240 | Msa1360380 | 0.825029 | 5.858029e-54 | -8.615850e-47 |
Msa0264240 | Msa1366700 | 0.801038 | 1.086899e-48 | -8.615850e-47 |
Msa0264240 | Msa1368660 | 0.806936 | 6.458122e-50 | -8.615850e-47 |
Msa0264240 | Msa1370630 | 0.844537 | 7.110059e-59 | -8.615850e-47 |
Msa0264240 | Msa1384980 | 0.842146 | 3.090168e-58 | -8.615850e-47 |
Msa0264240 | Msa1388070 | 0.825864 | 3.715840e-54 | -8.615850e-47 |
Msa0264240 | Msa1400600 | 0.803028 | 4.238346e-49 | -8.615850e-47 |
Msa0264240 | Msa1405190 | 0.812074 | 5.089299e-51 | -8.615850e-47 |
Msa0264240 | Msa1405470 | 0.815126 | 1.084268e-51 | -8.615850e-47 |
Msa0264240 | Msa1407200 | 0.811994 | 5.298026e-51 | -8.615850e-47 |
Msa0264240 | Msa1408190 | 0.816824 | 4.531758e-52 | -8.615850e-47 |
Msa0264240 | Msa1409050 | 0.802251 | 6.130021e-49 | -8.615850e-47 |
Msa0264240 | Msa1409760 | 0.812683 | 3.748012e-51 | -8.615850e-47 |
Msa0264240 | Msa1414560 | 0.822485 | 2.310512e-53 | -8.615850e-47 |
Msa0264240 | Msa1427180 | 0.833497 | 5.154917e-56 | -8.615850e-47 |
Msa0264240 | Msa1428440 | 0.852711 | 3.858349e-61 | -8.615850e-47 |
Msa0264240 | Msa1431870 | 0.822191 | 2.703595e-53 | -8.615850e-47 |
Msa0264240 | Msa1432250 | 0.848053 | 7.832235e-60 | -8.615850e-47 |
Msa0264240 | Msa1433380 | 0.819258 | 1.276762e-52 | -8.615850e-47 |
Msa0264240 | Msa1443440 | 0.832178 | 1.096249e-55 | -8.615850e-47 |
Msa0264240 | Msa1445250 | 0.832978 | 6.942723e-56 | -8.615850e-47 |
Msa0264240 | Msa1448990 | 0.815872 | 7.400841e-52 | -8.615850e-47 |
Msa0264240 | Msa1450420 | 0.807243 | 5.558414e-50 | -8.615850e-47 |
Msa0264240 | Msa1450850 | 0.817979 | 2.490160e-52 | -8.615850e-47 |
Msa0264240 | Msa1457450 | 0.809995 | 1.435931e-50 | -8.615850e-47 |
Msa0264240 | Msa1459630 | 0.832607 | 8.585472e-56 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0264240 | MtrunA17_Chr7g0230671 | 82.609 | 184 | 8 | 2 | 1 | 164 | 1 | 180 | 1.32e-94 | 290 |
Msa0264240 | MtrunA17_Chr4g0012061 | 46.597 | 191 | 69 | 5 | 2 | 164 | 7 | 192 | 2.48e-38 | 140 |
Msa0264240 | MtrunA17_Chr7g0270371 | 94.737 | 38 | 2 | 0 | 166 | 203 | 240 | 277 | 3.18e-18 | 82.0 |
Msa0264240 | MtrunA17_Chr1g0194201 | 92.105 | 38 | 3 | 0 | 166 | 203 | 240 | 277 | 6.18e-18 | 81.3 |
Msa0264240 | MtrunA17_Chr7g0246591 | 89.474 | 38 | 4 | 0 | 166 | 203 | 306 | 343 | 2.06e-17 | 79.7 |
Msa0264240 | MtrunA17_Chr2g0320011 | 92.105 | 38 | 3 | 0 | 166 | 203 | 253 | 290 | 5.39e-17 | 78.6 |
Msa0264240 | MtrunA17_Chr2g0284091 | 89.474 | 38 | 4 | 0 | 166 | 203 | 205 | 242 | 1.21e-16 | 77.4 |
Msa0264240 | MtrunA17_Chr1g0193081 | 86.842 | 38 | 5 | 0 | 166 | 203 | 240 | 277 | 1.88e-16 | 77.0 |
Msa0264240 | MtrunA17_Chr2g0277011 | 86.842 | 38 | 5 | 0 | 166 | 203 | 255 | 292 | 2.99e-16 | 76.3 |
Msa0264240 | MtrunA17_Chr8g0350311 | 81.579 | 38 | 7 | 0 | 166 | 203 | 304 | 341 | 2.01e-15 | 73.9 |
Msa0264240 | MtrunA17_Chr7g0273601 | 48.077 | 52 | 25 | 1 | 154 | 203 | 258 | 309 | 2.67e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0264240 | AT1G79600.1 | 55.856 | 111 | 29 | 1 | 74 | 164 | 77 | 187 | 2.76e-32 | 123 |
Msa0264240 | AT5G14640.1 | 92.105 | 38 | 3 | 0 | 166 | 203 | 239 | 276 | 3.15e-17 | 79.3 |
Msa0264240 | AT5G14640.2 | 92.105 | 38 | 3 | 0 | 166 | 203 | 239 | 276 | 3.15e-17 | 79.3 |
Msa0264240 | AT4G18710.2 | 89.474 | 38 | 4 | 0 | 166 | 203 | 199 | 236 | 4.70e-17 | 77.8 |
Msa0264240 | AT3G05840.2 | 89.474 | 38 | 4 | 0 | 166 | 203 | 238 | 275 | 5.36e-17 | 79.0 |
Msa0264240 | AT3G05840.1 | 89.474 | 38 | 4 | 0 | 166 | 203 | 238 | 275 | 5.36e-17 | 79.0 |
Msa0264240 | AT5G26751.1 | 89.474 | 38 | 4 | 0 | 166 | 203 | 234 | 271 | 7.13e-17 | 78.6 |
Msa0264240 | AT4G18710.1 | 89.474 | 38 | 4 | 0 | 166 | 203 | 205 | 242 | 1.89e-16 | 77.0 |
Msa0264240 | AT2G30980.1 | 89.474 | 38 | 4 | 0 | 166 | 203 | 237 | 274 | 2.73e-16 | 76.6 |
Msa0264240 | AT1G06390.2 | 89.474 | 38 | 4 | 0 | 166 | 203 | 235 | 272 | 2.88e-16 | 76.6 |
Msa0264240 | AT1G06390.1 | 89.474 | 38 | 4 | 0 | 166 | 203 | 235 | 272 | 2.88e-16 | 76.6 |
Msa0264240 | AT1G57870.1 | 86.842 | 38 | 5 | 0 | 166 | 203 | 247 | 284 | 3.11e-16 | 76.6 |
Msa0264240 | AT1G57870.4 | 86.842 | 38 | 5 | 0 | 166 | 203 | 247 | 284 | 3.11e-16 | 76.6 |
Msa0264240 | AT1G57870.2 | 86.842 | 38 | 5 | 0 | 166 | 203 | 247 | 284 | 3.11e-16 | 76.6 |
Msa0264240 | AT1G57870.3 | 86.842 | 38 | 5 | 0 | 166 | 203 | 247 | 284 | 3.23e-16 | 76.6 |
Msa0264240 | AT1G09840.11 | 84.211 | 38 | 6 | 0 | 166 | 203 | 121 | 158 | 5.88e-16 | 75.1 |
Msa0264240 | AT1G09840.3 | 84.211 | 38 | 6 | 0 | 166 | 203 | 248 | 285 | 6.82e-16 | 75.9 |
Msa0264240 | AT1G09840.7 | 84.211 | 38 | 6 | 0 | 166 | 203 | 248 | 285 | 6.82e-16 | 75.9 |
Msa0264240 | AT1G09840.10 | 84.211 | 38 | 6 | 0 | 166 | 203 | 248 | 285 | 6.82e-16 | 75.9 |
Msa0264240 | AT1G09840.6 | 84.211 | 38 | 6 | 0 | 166 | 203 | 248 | 285 | 6.82e-16 | 75.9 |
Msa0264240 | AT1G09840.4 | 84.211 | 38 | 6 | 0 | 166 | 203 | 248 | 285 | 6.82e-16 | 75.9 |
Msa0264240 | AT1G09840.1 | 84.211 | 38 | 6 | 0 | 166 | 203 | 248 | 285 | 6.82e-16 | 75.9 |
Msa0264240 | AT1G09840.9 | 84.211 | 38 | 6 | 0 | 166 | 203 | 248 | 285 | 6.82e-16 | 75.9 |
Msa0264240 | AT1G09840.5 | 84.211 | 38 | 6 | 0 | 166 | 203 | 248 | 285 | 6.82e-16 | 75.9 |
Msa0264240 | AT1G09840.8 | 84.211 | 38 | 6 | 0 | 166 | 203 | 248 | 285 | 6.82e-16 | 75.9 |
Msa0264240 | AT1G09840.2 | 84.211 | 38 | 6 | 0 | 166 | 203 | 248 | 285 | 6.82e-16 | 75.9 |
Msa0264240 | AT4G00720.1 | 81.579 | 38 | 7 | 0 | 166 | 203 | 303 | 340 | 1.11e-15 | 75.1 |
Msa0264240 | AT3G61160.5 | 76.316 | 38 | 9 | 0 | 166 | 203 | 267 | 304 | 3.89e-15 | 73.6 |
Msa0264240 | AT3G61160.3 | 76.316 | 38 | 9 | 0 | 166 | 203 | 267 | 304 | 3.98e-15 | 73.2 |
Msa0264240 | AT3G61160.6 | 76.316 | 38 | 9 | 0 | 166 | 203 | 274 | 311 | 4.33e-15 | 73.2 |
Msa0264240 | AT3G61160.1 | 76.316 | 38 | 9 | 0 | 166 | 203 | 267 | 304 | 6.25e-15 | 72.8 |
Msa0264240 | AT3G61160.2 | 76.316 | 38 | 9 | 0 | 166 | 203 | 274 | 311 | 6.39e-15 | 72.8 |
Msa0264240 | AT3G61160.4 | 76.316 | 38 | 9 | 0 | 166 | 203 | 267 | 304 | 7.07e-15 | 72.8 |
Msa0264240 | AT2G46070.2 | 63.158 | 38 | 14 | 0 | 166 | 203 | 206 | 243 | 6.93e-12 | 63.9 |
Msa0264240 | AT2G46070.3 | 63.158 | 38 | 14 | 0 | 166 | 203 | 240 | 277 | 8.36e-12 | 63.9 |
Msa0264240 | AT2G46070.1 | 63.158 | 38 | 14 | 0 | 166 | 203 | 206 | 243 | 9.11e-12 | 63.5 |
Find 62 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGACCATATTCACAAATT+TGG | 0.128326 | 2_2:+64156706 | Msa0264240:CDS |
CATTTGCCCACCTGAATATT+TGG | 0.168236 | 2_2:+64156775 | Msa0264240:CDS |
TAATTATACCTAGTATAATT+AGG | 0.273993 | 2_2:-64157776 | None:intergenic |
TGGTCCCAAATTTGTGAATA+TGG | 0.278942 | 2_2:-64156711 | None:intergenic |
GAGAGTTCTTCCAAATATTC+AGG | 0.282444 | 2_2:-64156785 | None:intergenic |
CACTTGATTTCTTCCCTGGT+TGG | 0.307218 | 2_2:-64157746 | None:intergenic |
AAGACCATATTCACAAATTT+GGG | 0.307258 | 2_2:+64156707 | Msa0264240:CDS |
GGAAGAACTCTCTGAGCTTC+AGG | 0.314029 | 2_2:+64156796 | Msa0264240:CDS |
GTGAGTGCTTTGGGTTCATT+TGG | 0.326353 | 2_2:+64156614 | Msa0264240:CDS |
GTTGAAATTGTGAGTGCTTT+GGG | 0.327077 | 2_2:+64156605 | Msa0264240:CDS |
ACTTGATTTCTTCCCTGGTT+GGG | 0.328331 | 2_2:-64157745 | None:intergenic |
TAAACTTGGGAAATCTTTGT+AGG | 0.332114 | 2_2:+64157805 | Msa0264240:three_prime_UTR |
AAGTCGTATCGAAGAATATA+TGG | 0.350780 | 2_2:+64157904 | Msa0264240:three_prime_UTR |
ATCGTACCTTTGGTTAGAAA+TGG | 0.357079 | 2_2:+64155444 | Msa0264240:CDS |
GACACTTGATAAGAATAAAA+AGG | 0.358611 | 2_2:+64156667 | Msa0264240:CDS |
CATGCACTTGATTTCTTCCC+TGG | 0.361221 | 2_2:-64157750 | None:intergenic |
TGGTCAGCTGGTTGCGTACT+TGG | 0.374738 | 2_2:+64157401 | Msa0264240:CDS |
TGTTGAAATTGTGAGTGCTT+TGG | 0.381233 | 2_2:+64156604 | Msa0264240:CDS |
TTTGTTGTATCCTAACGAAT+AGG | 0.383838 | 2_2:+64158031 | Msa0264240:three_prime_UTR |
TATAATTATATATATAAACT+TGG | 0.404308 | 2_2:+64157791 | Msa0264240:three_prime_UTR |
CTTGATTTCTTCCCTGGTTG+GGG | 0.414502 | 2_2:-64157744 | None:intergenic |
ATTCAATCATAGCTCAGTTA+TGG | 0.423401 | 2_2:-64157960 | None:intergenic |
GCCACTGTTTCCTGTGATAG+TGG | 0.427336 | 2_2:+64157529 | Msa0264240:intron |
TACAAGTAACATCGTACCTT+TGG | 0.441869 | 2_2:+64155434 | Msa0264240:CDS |
TACTCAGTTGCACCGAATAT+AGG | 0.447929 | 2_2:-64157359 | None:intergenic |
CCTTGATAATTTCCACAAGT+TGG | 0.452229 | 2_2:-64157558 | None:intergenic |
TCGTTGGATAGGAATTGAAC+TGG | 0.469500 | 2_2:-64155340 | None:intergenic |
TATTCAGGTGGGCAAATGTC+AGG | 0.469978 | 2_2:-64156770 | None:intergenic |
CTGAAACGACGTCGTTGGAT+AGG | 0.472321 | 2_2:-64155351 | None:intergenic |
TGACCTAACTTCACAAAAGT+TGG | 0.472861 | 2_2:-64156731 | None:intergenic |
AAATCTTTGTAGGTTAATCA+AGG | 0.473313 | 2_2:+64157815 | Msa0264240:three_prime_UTR |
AGAGCTCCTGAGCCTATATT+CGG | 0.474591 | 2_2:+64157347 | Msa0264240:CDS |
TGAGTGCTTTGGGTTCATTT+GGG | 0.477483 | 2_2:+64156615 | Msa0264240:CDS |
GTCATTGACATCTGGTCAGC+TGG | 0.482850 | 2_2:+64157389 | Msa0264240:CDS |
CACAACCATGTTATTCATCA+TGG | 0.483949 | 2_2:+64155301 | Msa0264240:CDS |
CAAAATTCTTGCTGCTGTGG+TGG | 0.496154 | 2_2:+64155398 | Msa0264240:CDS |
ATATCATCAGCACGGTTCAA+TGG | 0.498271 | 2_2:-64155489 | None:intergenic |
TGACTACACTCCTATTCGTT+AGG | 0.509378 | 2_2:-64158041 | None:intergenic |
CCAACTTGTGGAAATTATCA+AGG | 0.511188 | 2_2:+64157558 | Msa0264240:three_prime_UTR |
AAAGGTACGATGTTACTTGT+AGG | 0.523602 | 2_2:-64155432 | None:intergenic |
ACACCACAGTCATTGACATC+TGG | 0.524089 | 2_2:+64157381 | Msa0264240:CDS |
GCATGAATCCTAATTATACT+AGG | 0.531370 | 2_2:+64157768 | Msa0264240:three_prime_UTR |
TTTGTTCCATTTCTAACCAA+AGG | 0.539371 | 2_2:-64155450 | None:intergenic |
TGCCTCTGAAACGACGTCGT+TGG | 0.544692 | 2_2:-64155356 | None:intergenic |
ATCCAACGACGTCGTTTCAG+AGG | 0.546238 | 2_2:+64155354 | Msa0264240:CDS |
ATAATTATATATATAAACTT+GGG | 0.556155 | 2_2:+64157792 | Msa0264240:three_prime_UTR |
TCTCAAAATTCTTGCTGCTG+TGG | 0.563774 | 2_2:+64155395 | Msa0264240:CDS |
TTGGTCTACTCCACTATCAC+AGG | 0.564955 | 2_2:-64157539 | None:intergenic |
GTTGCACCGAATATAGGCTC+AGG | 0.565527 | 2_2:-64157353 | None:intergenic |
TAGGTCAAGGATCGTCCACT+AGG | 0.585067 | 2_2:+64156747 | Msa0264240:CDS |
TGGGCAAATGTCAGGCCTAG+TGG | 0.591643 | 2_2:-64156762 | None:intergenic |
AGTTCTTCCAAATATTCAGG+TGG | 0.604803 | 2_2:-64156782 | None:intergenic |
TGCTGATGATATTCAAGCTG+AGG | 0.610385 | 2_2:+64155500 | Msa0264240:CDS |
CGAGTCCATGATGAATAACA+TGG | 0.613087 | 2_2:-64155306 | None:intergenic |
TCCACTATCACAGGAAACAG+TGG | 0.629471 | 2_2:-64157530 | None:intergenic |
GTTCTTCCAAATATTCAGGT+GGG | 0.636431 | 2_2:-64156781 | None:intergenic |
CGTTGGATAGGAATTGAACT+GGG | 0.640236 | 2_2:-64155339 | None:intergenic |
TGTTATTCATCATGGACTCG+TGG | 0.651746 | 2_2:+64155309 | Msa0264240:CDS |
TAGTGGAGTAGACCAACTTG+TGG | 0.657697 | 2_2:+64157546 | Msa0264240:exon |
CAGCTTGAATATCATCAGCA+CGG | 0.663261 | 2_2:-64155497 | None:intergenic |
TCAATGGAAGTGTAAGAACA+CGG | 0.678089 | 2_2:-64155473 | None:intergenic |
TGACCAGATGTCAATGACTG+TGG | 0.757242 | 2_2:-64157384 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATATAATACAAACAAAAT+AGG | + | chr2_2:64155711-64155730 | Msa0264240:intron | 10.0% |
!! | TATATAATACAAACAAAATA+GGG | + | chr2_2:64155712-64155731 | Msa0264240:intron | 10.0% |
!! | TGATTATTATGTACTTTATT+TGG | + | chr2_2:64155948-64155967 | Msa0264240:intron | 15.0% |
!!! | TTCAAATATACATAACTTTT+CGG | - | chr2_2:64156217-64156236 | None:intergenic | 15.0% |
!! | AAACAAAACAAAAATATGAA+AGG | - | chr2_2:64157662-64157681 | None:intergenic | 15.0% |
!!! | TATTTTCAGTTTAGTTAATT+CGG | + | chr2_2:64157687-64157706 | Msa0264240:intron | 15.0% |
!! | TAATTATACCTAGTATAATT+AGG | - | chr2_2:64157779-64157798 | None:intergenic | 15.0% |
!! | ATAAAAAATTGTAGGCAATA+AGG | - | chr2_2:64156141-64156160 | None:intergenic | 20.0% |
!! | ACATACACATAAAAAATTGT+AGG | - | chr2_2:64156149-64156168 | None:intergenic | 20.0% |
!! | CAAATTTCAACAACAATATT+TGG | - | chr2_2:64156431-64156450 | None:intergenic | 20.0% |
!! | AAATGCAACTATATAAATGA+GGG | - | chr2_2:64156842-64156861 | None:intergenic | 20.0% |
!! | AAAATGCAACTATATAAATG+AGG | - | chr2_2:64156843-64156862 | None:intergenic | 20.0% |
!!! | AATTGTTGGCTTCTAAATAT+GGG | + | chr2_2:64155568-64155587 | Msa0264240:intron | 25.0% |
! | CAAGAAAGAACTTTCAAAAA+GGG | - | chr2_2:64155800-64155819 | None:intergenic | 25.0% |
! | TCAAGAAAGAACTTTCAAAA+AGG | - | chr2_2:64155801-64155820 | None:intergenic | 25.0% |
! | ATGTATATTTGAACACAGTT+TGG | + | chr2_2:64156224-64156243 | Msa0264240:intron | 25.0% |
! | TGTCATTAGTTACGATATTT+AGG | - | chr2_2:64156293-64156312 | None:intergenic | 25.0% |
! | TTTCAACAACAATATTTGGA+CGG | - | chr2_2:64156427-64156446 | None:intergenic | 25.0% |
!! | ATGAATTCAAGTTTGAGTTA+AGG | - | chr2_2:64156468-64156487 | None:intergenic | 25.0% |
! | AACCAATAAAACCAAAATCA+GGG | - | chr2_2:64156561-64156580 | None:intergenic | 25.0% |
! | TAACCAATAAAACCAAAATC+AGG | - | chr2_2:64156562-64156581 | None:intergenic | 25.0% |
!!! | GATTTTGGTTTTATTGGTTA+TGG | + | chr2_2:64156562-64156581 | Msa0264240:intron | 25.0% |
!!! | TGTTTTTAGAGCAAAAGAAT+GGG | + | chr2_2:64156645-64156664 | Msa0264240:CDS | 25.0% |
! | GACACTTGATAAGAATAAAA+AGG | + | chr2_2:64156667-64156686 | Msa0264240:CDS | 25.0% |
! | AAGACCATATTCACAAATTT+GGG | + | chr2_2:64156707-64156726 | Msa0264240:CDS | 25.0% |
! | AACTATATAAATGAGGGAAA+GGG | - | chr2_2:64156836-64156855 | None:intergenic | 25.0% |
! | TTGAATTCAAGCTCATAAAA+AGG | - | chr2_2:64157039-64157058 | None:intergenic | 25.0% |
! | AAATCTTTGTAGGTTAATCA+AGG | + | chr2_2:64157815-64157834 | Msa0264240:three_prime_UTR | 25.0% |
TTTGTTCCATTTCTAACCAA+AGG | - | chr2_2:64155453-64155472 | None:intergenic | 30.0% | |
TATTTAGAAGCCAACAATTC+AGG | - | chr2_2:64155567-64155586 | None:intergenic | 30.0% | |
!! | GAATTGTTGGCTTCTAAATA+TGG | + | chr2_2:64155567-64155586 | Msa0264240:intron | 30.0% |
TCATAAGGCGAAAAAAGTAA+TGG | - | chr2_2:64155622-64155641 | None:intergenic | 30.0% | |
!!! | TTGCGCACAGATTTTAAAAT+CGG | + | chr2_2:64155647-64155666 | Msa0264240:intron | 30.0% |
!!! | GGAAATGTTTTAACGTGTTT+TGG | + | chr2_2:64155668-64155687 | Msa0264240:intron | 30.0% |
!!! | AATGTTTTAACGTGTTTTGG+AGG | + | chr2_2:64155671-64155690 | Msa0264240:intron | 30.0% |
GTAGTACTTGATTCACTAAT+TGG | + | chr2_2:64155821-64155840 | Msa0264240:intron | 30.0% | |
! | GTACTTTATTTGGTACTTGT+AGG | + | chr2_2:64155958-64155977 | Msa0264240:intron | 30.0% |
ATAGTACTAGTTCATACATG+TGG | + | chr2_2:64155991-64156010 | Msa0264240:intron | 30.0% | |
ATATTTGAACACAGTTTGGT+TGG | + | chr2_2:64156228-64156247 | Msa0264240:intron | 30.0% | |
AACTAATGACATTCATGATG+TGG | + | chr2_2:64156302-64156321 | Msa0264240:intron | 30.0% | |
TGATGTGGTTAATTACAATC+AGG | + | chr2_2:64156317-64156336 | Msa0264240:intron | 30.0% | |
AGACGGTTAATGAATATAAC+AGG | - | chr2_2:64156367-64156386 | None:intergenic | 30.0% | |
!!! | GGTTTTATTGGTTATGGTTT+AGG | + | chr2_2:64156568-64156587 | Msa0264240:intron | 30.0% |
!! | TTATGGTTTAGGTTGTACAA+AGG | + | chr2_2:64156579-64156598 | Msa0264240:intron | 30.0% |
!! | TATGGTTTAGGTTGTACAAA+GGG | + | chr2_2:64156580-64156599 | Msa0264240:intron | 30.0% |
!!! | CTGTTTTTAGAGCAAAAGAA+TGG | + | chr2_2:64156644-64156663 | Msa0264240:CDS | 30.0% |
GAAGACCATATTCACAAATT+TGG | + | chr2_2:64156706-64156725 | Msa0264240:CDS | 30.0% | |
CAACTATATAAATGAGGGAA+AGG | - | chr2_2:64156837-64156856 | None:intergenic | 30.0% | |
! | TTTTGTGCGATTTGAAAATG+TGG | + | chr2_2:64156922-64156941 | Msa0264240:intron | 30.0% |
ATTCAAGCTCTTGAACAATT+CGG | + | chr2_2:64157053-64157072 | Msa0264240:intron | 30.0% | |
GACAATGCATAAAATATGCA+AGG | + | chr2_2:64157210-64157229 | Msa0264240:intron | 30.0% | |
GAACAGATGTAAGATATGTT+TGG | - | chr2_2:64157317-64157336 | None:intergenic | 30.0% | |
ACATATCTTACATCTGTTCT+AGG | + | chr2_2:64157318-64157337 | Msa0264240:intron | 30.0% | |
! | GTTAATTCGGAATTTTCATG+TGG | + | chr2_2:64157700-64157719 | Msa0264240:intron | 30.0% |
GCATGAATCCTAATTATACT+AGG | + | chr2_2:64157768-64157787 | Msa0264240:three_prime_UTR | 30.0% | |
TAAACTTGGGAAATCTTTGT+AGG | + | chr2_2:64157805-64157824 | Msa0264240:three_prime_UTR | 30.0% | |
AAGTCGTATCGAAGAATATA+TGG | + | chr2_2:64157904-64157923 | Msa0264240:three_prime_UTR | 30.0% | |
ATTCAATCATAGCTCAGTTA+TGG | - | chr2_2:64157963-64157982 | None:intergenic | 30.0% | |
! | ACAAAAATGGCACTCTAAAA+CGG | - | chr2_2:64158016-64158035 | None:intergenic | 30.0% |
TCGTTAGGATACAACAAAAA+TGG | - | chr2_2:64158029-64158048 | None:intergenic | 30.0% | |
! | TTTGTTGTATCCTAACGAAT+AGG | + | chr2_2:64158031-64158050 | Msa0264240:three_prime_UTR | 30.0% |
CACAACCATGTTATTCATCA+TGG | + | chr2_2:64155301-64155320 | Msa0264240:CDS | 35.0% | |
!!! | AATTTTGAGACGTTTGAGGT+AGG | - | chr2_2:64155385-64155404 | None:intergenic | 35.0% |
!!! | CAAGAATTTTGAGACGTTTG+AGG | - | chr2_2:64155389-64155408 | None:intergenic | 35.0% |
! | AAAGGTACGATGTTACTTGT+AGG | - | chr2_2:64155435-64155454 | None:intergenic | 35.0% |
TACAAGTAACATCGTACCTT+TGG | + | chr2_2:64155434-64155453 | Msa0264240:CDS | 35.0% | |
ATCGTACCTTTGGTTAGAAA+TGG | + | chr2_2:64155444-64155463 | Msa0264240:CDS | 35.0% | |
! | TCAATGGAAGTGTAAGAACA+CGG | - | chr2_2:64155476-64155495 | None:intergenic | 35.0% |
GCTATTAATGCTACTCTGTA+TGG | + | chr2_2:64155540-64155559 | Msa0264240:intron | 35.0% | |
AGTAAAAACCTTGATGCGTT+GGG | - | chr2_2:64155595-64155614 | None:intergenic | 35.0% | |
AAGTAAAAACCTTGATGCGT+TGG | - | chr2_2:64155596-64155615 | None:intergenic | 35.0% | |
ATCAATAGGGTAGGAAAAGA+AGG | + | chr2_2:64155745-64155764 | Msa0264240:intron | 35.0% | |
AATTGGTAGAGCTGTCAAAA+CGG | + | chr2_2:64155838-64155857 | Msa0264240:intron | 35.0% | |
TCATGATTGACTGCGTTTAA+TGG | - | chr2_2:64156111-64156130 | None:intergenic | 35.0% | |
AAACGCAGTCAATCATGATT+AGG | + | chr2_2:64156113-64156132 | Msa0264240:intron | 35.0% | |
! | AACACAGTTTGGTTGGTTAA+CGG | + | chr2_2:64156235-64156254 | Msa0264240:intron | 35.0% |
! | TTGGTTGGTTAACGGATAAT+CGG | + | chr2_2:64156243-64156262 | Msa0264240:intron | 35.0% |
GTTAATTACAATCAGGTCGA+TGG | + | chr2_2:64156324-64156343 | Msa0264240:intron | 35.0% | |
GGTTGATTACGTTCAATAGA+CGG | - | chr2_2:64156384-64156403 | None:intergenic | 35.0% | |
GTCAGTGCAATTTAAATACG+TGG | - | chr2_2:64156405-64156424 | None:intergenic | 35.0% | |
TGTATGCATGCAATGTAGAT+TGG | + | chr2_2:64156515-64156534 | Msa0264240:intron | 35.0% | |
GTATGCATGCAATGTAGATT+GGG | + | chr2_2:64156516-64156535 | Msa0264240:intron | 35.0% | |
! | CAATGTAGATTGGGTTTTTG+AGG | + | chr2_2:64156525-64156544 | Msa0264240:intron | 35.0% |
!!! | GACCCTGATTTTGGTTTTAT+TGG | + | chr2_2:64156556-64156575 | Msa0264240:intron | 35.0% |
TGTTGAAATTGTGAGTGCTT+TGG | + | chr2_2:64156604-64156623 | Msa0264240:CDS | 35.0% | |
GTTGAAATTGTGAGTGCTTT+GGG | + | chr2_2:64156605-64156624 | Msa0264240:CDS | 35.0% | |
! | GATAAGAATAAAAAGGCACG+TGG | + | chr2_2:64156674-64156693 | Msa0264240:CDS | 35.0% |
TGGTCCCAAATTTGTGAATA+TGG | - | chr2_2:64156714-64156733 | None:intergenic | 35.0% | |
TGACCTAACTTCACAAAAGT+TGG | - | chr2_2:64156734-64156753 | None:intergenic | 35.0% | |
! | ACTTTTGTGAAGTTAGGTCA+AGG | + | chr2_2:64156734-64156753 | Msa0264240:CDS | 35.0% |
GTTCTTCCAAATATTCAGGT+GGG | - | chr2_2:64156784-64156803 | None:intergenic | 35.0% | |
AGTTCTTCCAAATATTCAGG+TGG | - | chr2_2:64156785-64156804 | None:intergenic | 35.0% | |
GAGAGTTCTTCCAAATATTC+AGG | - | chr2_2:64156788-64156807 | None:intergenic | 35.0% | |
!! | ACATGTTCTATGTGTTGCTT+AGG | + | chr2_2:64156875-64156894 | Msa0264240:intron | 35.0% |
GCTTAGGACAGAACAAAATT+AGG | + | chr2_2:64156891-64156910 | Msa0264240:intron | 35.0% | |
AAAAGGTTCATGATGAACTC+AGG | - | chr2_2:64157022-64157041 | None:intergenic | 35.0% | |
GCTCAATAGTTTGACTCATT+TGG | + | chr2_2:64157080-64157099 | Msa0264240:intron | 35.0% | |
TGCATAAAATATGCAAGGTC+CGG | + | chr2_2:64157215-64157234 | Msa0264240:intron | 35.0% | |
!!! | TGACAGTGAACTTTTTTTGG+TGG | - | chr2_2:64157258-64157277 | None:intergenic | 35.0% |
!!! | GGTTGACAGTGAACTTTTTT+TGG | - | chr2_2:64157261-64157280 | None:intergenic | 35.0% |
! | CCTTGATAATTTCCACAAGT+TGG | - | chr2_2:64157561-64157580 | None:intergenic | 35.0% |
CCAACTTGTGGAAATTATCA+AGG | + | chr2_2:64157558-64157577 | Msa0264240:three_prime_UTR | 35.0% | |
ATATGTTCAAGCTAGTAGCA+AGG | - | chr2_2:64157626-64157645 | None:intergenic | 35.0% | |
CGAGTCCATGATGAATAACA+TGG | - | chr2_2:64155309-64155328 | None:intergenic | 40.0% | |
TGTTATTCATCATGGACTCG+TGG | + | chr2_2:64155309-64155328 | Msa0264240:CDS | 40.0% | |
CGTTGGATAGGAATTGAACT+GGG | - | chr2_2:64155342-64155361 | None:intergenic | 40.0% | |
TCGTTGGATAGGAATTGAAC+TGG | - | chr2_2:64155343-64155362 | None:intergenic | 40.0% | |
TCTCAAAATTCTTGCTGCTG+TGG | + | chr2_2:64155395-64155414 | Msa0264240:CDS | 40.0% | |
ATATCATCAGCACGGTTCAA+TGG | - | chr2_2:64155492-64155511 | None:intergenic | 40.0% | |
CAGCTTGAATATCATCAGCA+CGG | - | chr2_2:64155500-64155519 | None:intergenic | 40.0% | |
TGCTGATGATATTCAAGCTG+AGG | + | chr2_2:64155500-64155519 | Msa0264240:CDS | 40.0% | |
TCTGTATGGTCCTGAATTGT+TGG | + | chr2_2:64155554-64155573 | Msa0264240:intron | 40.0% | |
ATTGGTAGAGCTGTCAAAAC+GGG | + | chr2_2:64155839-64155858 | Msa0264240:intron | 40.0% | |
!!! | GTCTATTTTGACAGCTCTAC+TGG | + | chr2_2:64155870-64155889 | Msa0264240:intron | 40.0% |
!! | ATTTTGACAGCTCTACTGGT+TGG | + | chr2_2:64155874-64155893 | Msa0264240:intron | 40.0% |
!!! | GATTGATTCGACCCTGATTT+TGG | + | chr2_2:64156547-64156566 | Msa0264240:intron | 40.0% |
! | TGAGTGCTTTGGGTTCATTT+GGG | + | chr2_2:64156615-64156634 | Msa0264240:CDS | 40.0% |
! | GGACCAACTTTTGTGAAGTT+AGG | + | chr2_2:64156728-64156747 | Msa0264240:CDS | 40.0% |
CATTTGCCCACCTGAATATT+TGG | + | chr2_2:64156775-64156794 | Msa0264240:CDS | 40.0% | |
TGCGATTTGAAAATGTGGCT+AGG | + | chr2_2:64156927-64156946 | Msa0264240:intron | 40.0% | |
GCGATTTGAAAATGTGGCTA+GGG | + | chr2_2:64156928-64156947 | Msa0264240:intron | 40.0% | |
GGGTTGAAAATGAGTCGAAT+TGG | + | chr2_2:64156948-64156967 | Msa0264240:intron | 40.0% | |
GCATAAAATATGCAAGGTCC+GGG | + | chr2_2:64157216-64157235 | Msa0264240:intron | 40.0% | |
CATAAAATATGCAAGGTCCG+GGG | + | chr2_2:64157217-64157236 | Msa0264240:intron | 40.0% | |
!!! | CAGTGAACTTTTTTTGGTGG+TGG | - | chr2_2:64157255-64157274 | None:intergenic | 40.0% |
TTCACTGTCAACCCTACATA+GGG | + | chr2_2:64157268-64157287 | Msa0264240:intron | 40.0% | |
CTGTAAAACTGCCCTATGTA+GGG | - | chr2_2:64157282-64157301 | None:intergenic | 40.0% | |
TACTCAGTTGCACCGAATAT+AGG | - | chr2_2:64157362-64157381 | None:intergenic | 40.0% | |
!! | GTACTTGGTGAACTTTTGCT+TGG | + | chr2_2:64157416-64157435 | Msa0264240:CDS | 40.0% |
ACACAAAGAAGCTAGTTACC+TGG | - | chr2_2:64157442-64157461 | None:intergenic | 40.0% | |
CTAGCTTCTTTGTGTATGCT+TGG | + | chr2_2:64157447-64157466 | Msa0264240:intron | 40.0% | |
ACTTGATTTCTTCCCTGGTT+GGG | - | chr2_2:64157748-64157767 | None:intergenic | 40.0% | |
TGACTACACTCCTATTCGTT+AGG | - | chr2_2:64158044-64158063 | None:intergenic | 40.0% | |
CAAAATTCTTGCTGCTGTGG+TGG | + | chr2_2:64155398-64155417 | Msa0264240:CDS | 45.0% | |
CTGTGCGCAAGAAACTCATA+AGG | - | chr2_2:64155637-64155656 | None:intergenic | 45.0% | |
GCGTGAGAAATCAATAGGGT+AGG | + | chr2_2:64155736-64155755 | Msa0264240:intron | 45.0% | |
! | GTGAGTGCTTTGGGTTCATT+TGG | + | chr2_2:64156614-64156633 | Msa0264240:CDS | 45.0% |
TATTCAGGTGGGCAAATGTC+AGG | - | chr2_2:64156773-64156792 | None:intergenic | 45.0% | |
TGAGCTTAGCTCAGTTGGTT+GGG | + | chr2_2:64157188-64157207 | Msa0264240:intron | 45.0% | |
!!! | AACTTTTTTTGGTGGTGGCC+GGG | - | chr2_2:64157250-64157269 | None:intergenic | 45.0% |
!!! | GAACTTTTTTTGGTGGTGGC+CGG | - | chr2_2:64157251-64157270 | None:intergenic | 45.0% |
GTTCACTGTCAACCCTACAT+AGG | + | chr2_2:64157267-64157286 | Msa0264240:intron | 45.0% | |
CCTGTAAAACTGCCCTATGT+AGG | - | chr2_2:64157283-64157302 | None:intergenic | 45.0% | |
! | CCTACATAGGGCAGTTTTAC+AGG | + | chr2_2:64157280-64157299 | Msa0264240:intron | 45.0% |
AGAGCTCCTGAGCCTATATT+CGG | + | chr2_2:64157347-64157366 | Msa0264240:CDS | 45.0% | |
ACACCACAGTCATTGACATC+TGG | + | chr2_2:64157381-64157400 | Msa0264240:CDS | 45.0% | |
TGACCAGATGTCAATGACTG+TGG | - | chr2_2:64157387-64157406 | None:intergenic | 45.0% | |
TCCACTATCACAGGAAACAG+TGG | - | chr2_2:64157533-64157552 | None:intergenic | 45.0% | |
TTGGTCTACTCCACTATCAC+AGG | - | chr2_2:64157542-64157561 | None:intergenic | 45.0% | |
TAGTGGAGTAGACCAACTTG+TGG | + | chr2_2:64157546-64157565 | Msa0264240:exon | 45.0% | |
! | TTTTCATGTGGTTCACCTGC+AGG | + | chr2_2:64157712-64157731 | Msa0264240:intron | 45.0% |
CTTGATTTCTTCCCTGGTTG+GGG | - | chr2_2:64157747-64157766 | None:intergenic | 45.0% | |
CACTTGATTTCTTCCCTGGT+TGG | - | chr2_2:64157749-64157768 | None:intergenic | 45.0% | |
CATGCACTTGATTTCTTCCC+TGG | - | chr2_2:64157753-64157772 | None:intergenic | 45.0% | |
!! | TATAATTATATATATAAACT+TGG | + | chr2_2:64157791-64157810 | Msa0264240:three_prime_UTR | 5.0% |
!! | ATAATTATATATATAAACTT+GGG | + | chr2_2:64157792-64157811 | Msa0264240:three_prime_UTR | 5.0% |
CTGAAACGACGTCGTTGGAT+AGG | - | chr2_2:64155354-64155373 | None:intergenic | 50.0% | |
ATCCAACGACGTCGTTTCAG+AGG | + | chr2_2:64155354-64155373 | Msa0264240:CDS | 50.0% | |
ATATGGGTCCCAACGCATCA+AGG | + | chr2_2:64155584-64155603 | Msa0264240:intron | 50.0% | |
AGGGCGCGTGAGAAATCAAT+AGG | + | chr2_2:64155731-64155750 | Msa0264240:intron | 50.0% | |
GGGCGCGTGAGAAATCAATA+GGG | + | chr2_2:64155732-64155751 | Msa0264240:intron | 50.0% | |
!! | GCTGTCAAAACGGGCTAAAG+TGG | + | chr2_2:64155848-64155867 | Msa0264240:intron | 50.0% |
TAGGTCAAGGATCGTCCACT+AGG | + | chr2_2:64156747-64156766 | Msa0264240:CDS | 50.0% | |
GGAAGAACTCTCTGAGCTTC+AGG | + | chr2_2:64156796-64156815 | Msa0264240:CDS | 50.0% | |
GTGAGCTTAGCTCAGTTGGT+TGG | + | chr2_2:64157187-64157206 | Msa0264240:intron | 50.0% | |
GTTGCACCGAATATAGGCTC+AGG | - | chr2_2:64157356-64157375 | None:intergenic | 50.0% | |
GTCATTGACATCTGGTCAGC+TGG | + | chr2_2:64157389-64157408 | Msa0264240:CDS | 50.0% | |
! | TGGTGAACTTTTGCTTGGCC+AGG | + | chr2_2:64157421-64157440 | Msa0264240:CDS | 50.0% |
GCCACTGTTTCCTGTGATAG+TGG | + | chr2_2:64157529-64157548 | Msa0264240:intron | 50.0% | |
! | GTGGTTCACCTGCAGGTTTT+AGG | + | chr2_2:64157719-64157738 | Msa0264240:intron | 50.0% |
! | TTGGGGTACCTAAAACCTGC+AGG | - | chr2_2:64157730-64157749 | None:intergenic | 50.0% |
!!! | AGGTTTTAGGTACCCCAACC+AGG | + | chr2_2:64157732-64157751 | Msa0264240:intron | 50.0% |
!!! | GGTTTTAGGTACCCCAACCA+GGG | + | chr2_2:64157733-64157752 | Msa0264240:intron | 50.0% |
!! | TGCCTCTGAAACGACGTCGT+TGG | - | chr2_2:64155359-64155378 | None:intergenic | 55.0% |
TGGGCAAATGTCAGGCCTAG+TGG | - | chr2_2:64156765-64156784 | None:intergenic | 55.0% | |
CCAACTGAGCTAAGCTCACG+AGG | - | chr2_2:64157186-64157205 | None:intergenic | 55.0% | |
CCTCGTGAGCTTAGCTCAGT+TGG | + | chr2_2:64157183-64157202 | Msa0264240:intron | 55.0% | |
TGGTCAGCTGGTTGCGTACT+TGG | + | chr2_2:64157401-64157420 | Msa0264240:CDS | 55.0% | |
AAGGTCCGGGGTTCGATTCC+CGG | + | chr2_2:64157229-64157248 | Msa0264240:intron | 60.0% | |
GGTGGCCGGGAATCGAACCC+CGG | - | chr2_2:64157237-64157256 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 64155282 | 64158067 | 64155282 | ID=Msa0264240;Name=Msa0264240 |
chr2_2 | mRNA | 64155282 | 64158067 | 64155282 | ID=Msa0264240-mRNA-1;Parent=Msa0264240;Name=Msa0264240-mRNA-1;_AED=0.06;_eAED=0.33;_QI=0|0.5|0.6|1|0.75|0.8|5|357|207 |
chr2_2 | exon | 64155282 | 64155556 | 64155282 | ID=Msa0264240-mRNA-1:exon:19977;Parent=Msa0264240-mRNA-1 |
chr2_2 | exon | 64156601 | 64156819 | 64156601 | ID=Msa0264240-mRNA-1:exon:19978;Parent=Msa0264240-mRNA-1 |
chr2_2 | exon | 64157340 | 64157442 | 64157340 | ID=Msa0264240-mRNA-1:exon:19979;Parent=Msa0264240-mRNA-1 |
chr2_2 | exon | 64157530 | 64157579 | 64157530 | ID=Msa0264240-mRNA-1:exon:19980;Parent=Msa0264240-mRNA-1 |
chr2_2 | exon | 64157734 | 64158067 | 64157734 | ID=Msa0264240-mRNA-1:exon:19981;Parent=Msa0264240-mRNA-1 |
chr2_2 | CDS | 64155282 | 64155556 | 64155282 | ID=Msa0264240-mRNA-1:cds;Parent=Msa0264240-mRNA-1 |
chr2_2 | CDS | 64156601 | 64156819 | 64156601 | ID=Msa0264240-mRNA-1:cds;Parent=Msa0264240-mRNA-1 |
chr2_2 | CDS | 64157340 | 64157442 | 64157340 | ID=Msa0264240-mRNA-1:cds;Parent=Msa0264240-mRNA-1 |
chr2_2 | CDS | 64157530 | 64157556 | 64157530 | ID=Msa0264240-mRNA-1:cds;Parent=Msa0264240-mRNA-1 |
chr2_2 | three_prime_UTR | 64157557 | 64157579 | 64157557 | ID=Msa0264240-mRNA-1:three_prime_utr;Parent=Msa0264240-mRNA-1 |
chr2_2 | three_prime_UTR | 64157734 | 64158067 | 64157734 | ID=Msa0264240-mRNA-1:three_prime_utr;Parent=Msa0264240-mRNA-1 |
Gene Sequence |
Protein sequence |