Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1229770 | RHN38827.1 | 96.501 | 343 | 12 | 0 | 1 | 343 | 60 | 402 | 0.0 | 680 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1229770 | sp|Q9SLN8|DBR_TOBAC | 73.314 | 341 | 90 | 1 | 3 | 343 | 4 | 343 | 0.0 | 512 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028280 | Msa1229770 | 0.801675 | 8.049613e-49 | -8.615850e-47 |
| Msa0085580 | Msa1229770 | 0.844490 | 7.319330e-59 | -8.615850e-47 |
| Msa0623360 | Msa1229770 | 0.831324 | 1.780909e-55 | -8.615850e-47 |
| Msa0630850 | Msa1229770 | 0.811816 | 5.793329e-51 | -8.615850e-47 |
| Msa0641030 | Msa1229770 | 0.801942 | 7.096252e-49 | -8.615850e-47 |
| Msa0643020 | Msa1229770 | -0.813676 | 2.268376e-51 | -8.615850e-47 |
| Msa0648200 | Msa1229770 | 0.804391 | 2.209522e-49 | -8.615850e-47 |
| Msa0648300 | Msa1229770 | 0.822393 | 2.426544e-53 | -8.615850e-47 |
| Msa0681880 | Msa1229770 | 0.827903 | 1.209989e-54 | -8.615850e-47 |
| Msa0682730 | Msa1229770 | -0.811715 | 6.093336e-51 | -8.615850e-47 |
| Msa0691140 | Msa1229770 | 0.811118 | 8.214882e-51 | -8.615850e-47 |
| Msa0734190 | Msa1229770 | 0.800724 | 1.260069e-48 | -8.615850e-47 |
| Msa0770020 | Msa1229770 | 0.820594 | 6.315009e-53 | -8.615850e-47 |
| Msa0772040 | Msa1229770 | 0.818182 | 2.240364e-52 | -8.615850e-47 |
| Msa0775420 | Msa1229770 | 0.820404 | 6.984535e-53 | -8.615850e-47 |
| Msa0782030 | Msa1229770 | 0.804747 | 1.862108e-49 | -8.615850e-47 |
| Msa0807980 | Msa1229770 | 0.811694 | 6.158249e-51 | -8.615850e-47 |
| Msa0812800 | Msa1229770 | 0.811465 | 6.908392e-51 | -8.615850e-47 |
| Msa0834200 | Msa1229770 | 0.802695 | 4.966028e-49 | -8.615850e-47 |
| Msa0834240 | Msa1229770 | 0.808266 | 3.370627e-50 | -8.615850e-47 |
| Msa0188500 | Msa1229770 | 0.806467 | 8.110596e-50 | -8.615850e-47 |
| Msa0200840 | Msa1229770 | 0.805271 | 1.446597e-49 | -8.615850e-47 |
| Msa0200870 | Msa1229770 | 0.816495 | 5.370464e-52 | -8.615850e-47 |
| Msa0216550 | Msa1229770 | 0.857181 | 1.944678e-62 | -8.615850e-47 |
| Msa0223190 | Msa1229770 | 0.809953 | 1.466160e-50 | -8.615850e-47 |
| Msa1229770 | Msa1240060 | -0.810146 | 1.332516e-50 | -8.615850e-47 |
| Msa1229770 | Msa1263610 | 0.829893 | 3.989519e-55 | -8.615850e-47 |
| Msa1229770 | Msa1276070 | 0.802831 | 4.655093e-49 | -8.615850e-47 |
| Msa1229770 | Msa1282210 | 0.820023 | 8.537774e-53 | -8.615850e-47 |
| Msa1229770 | Msa1320530 | -0.810782 | 9.712428e-51 | -8.615850e-47 |
| Msa1229770 | Msa1328630 | 0.802978 | 4.339929e-49 | -8.615850e-47 |
| Msa1229770 | Msa1328720 | 0.806220 | 9.142847e-50 | -8.615850e-47 |
| Msa1229770 | Msa1353280 | 0.836077 | 1.156000e-56 | -8.615850e-47 |
| Msa1229770 | Msa1357720 | 0.865231 | 6.858783e-65 | -8.615850e-47 |
| Msa1229770 | Msa1360380 | 0.804511 | 2.085983e-49 | -8.615850e-47 |
| Msa1229770 | Msa1370630 | 0.842018 | 3.340842e-58 | -8.615850e-47 |
| Msa1229770 | Msa1427180 | 0.811783 | 5.889194e-51 | -8.615850e-47 |
| Msa1229770 | Msa1445700 | 0.819462 | 1.146906e-52 | -8.615850e-47 |
| Msa0379500 | Msa1229770 | 0.802524 | 5.384646e-49 | -8.615850e-47 |
| Msa0401570 | Msa1229770 | 0.819272 | 1.266810e-52 | -8.615850e-47 |
| Msa0404180 | Msa1229770 | 0.812169 | 4.853773e-51 | -8.615850e-47 |
| Msa0436600 | Msa1229770 | 0.812850 | 3.444461e-51 | -8.615850e-47 |
| Msa0454940 | Msa1229770 | 0.827088 | 1.897950e-54 | -8.615850e-47 |
| Msa0465640 | Msa1229770 | 0.815122 | 1.086552e-51 | -8.615850e-47 |
| Msa1012520 | Msa1229770 | -0.804849 | 1.773379e-49 | -8.615850e-47 |
| Msa1016130 | Msa1229770 | 0.804774 | 1.837911e-49 | -8.615850e-47 |
| Msa1041550 | Msa1229770 | 0.866480 | 2.765134e-65 | -8.615850e-47 |
| Msa1053990 | Msa1229770 | -0.804326 | 2.279533e-49 | -8.615850e-47 |
| Msa1071310 | Msa1229770 | 0.802018 | 6.843976e-49 | -8.615850e-47 |
| Msa1081530 | Msa1229770 | 0.863559 | 2.283399e-64 | -8.615850e-47 |
| Msa0256410 | Msa1229770 | 0.850129 | 2.072758e-60 | -8.615850e-47 |
| Msa0264240 | Msa1229770 | 0.844479 | 7.368874e-59 | -8.615850e-47 |
| Msa0264420 | Msa1229770 | 0.815059 | 1.122077e-51 | -8.615850e-47 |
| Msa0266380 | Msa1229770 | 0.831407 | 1.699059e-55 | -8.615850e-47 |
| Msa0295850 | Msa1229770 | 0.855309 | 6.877960e-62 | -8.615850e-47 |
| Msa0302310 | Msa1229770 | 0.805024 | 1.630063e-49 | -8.615850e-47 |
| Msa0339560 | Msa1229770 | 0.852034 | 6.014358e-61 | -8.615850e-47 |
| Msa0339670 | Msa1229770 | 0.811035 | 8.560858e-51 | -8.615850e-47 |
| Msa0341860 | Msa1229770 | 0.826025 | 3.401141e-54 | -8.615850e-47 |
| Msa0343990 | Msa1229770 | 0.969024 | 1.614738e-129 | -8.615850e-47 |
| Msa0352640 | Msa1229770 | 0.839189 | 1.838757e-57 | -8.615850e-47 |
| Msa0362430 | Msa1229770 | 0.814937 | 1.194350e-51 | -8.615850e-47 |
| Msa0364010 | Msa1229770 | 0.833589 | 4.890318e-56 | -8.615850e-47 |
| Msa1166450 | Msa1229770 | 0.848414 | 6.224103e-60 | -8.615850e-47 |
| Msa1182530 | Msa1229770 | 0.801135 | 1.038401e-48 | -8.615850e-47 |
| Msa1188820 | Msa1229770 | 0.833043 | 6.689757e-56 | -8.615850e-47 |
| Msa1199580 | Msa1229770 | 0.809417 | 1.912081e-50 | -8.615850e-47 |
| Msa1216370 | Msa1229770 | -0.802244 | 6.151579e-49 | -8.615850e-47 |
| Msa0496470 | Msa1229770 | 0.804231 | 2.385160e-49 | -8.615850e-47 |
| Msa0502910 | Msa1229770 | 0.807283 | 5.452356e-50 | -8.615850e-47 |
| Msa0521100 | Msa1229770 | 0.832764 | 7.845894e-56 | -8.615850e-47 |
| Msa0546370 | Msa1229770 | 0.827765 | 1.305538e-54 | -8.615850e-47 |
| Msa0547200 | Msa1229770 | -0.800181 | 1.625808e-48 | -8.615850e-47 |
| Msa0554440 | Msa1229770 | 0.811483 | 6.844100e-51 | -8.615850e-47 |
| Msa0601920 | Msa1229770 | -0.801526 | 8.637660e-49 | -8.615850e-47 |
| Msa0850520 | Msa1229770 | 0.812501 | 4.106523e-51 | -8.615850e-47 |
| Msa0859950 | Msa1229770 | 0.827418 | 1.581709e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1229770 | MtrunA17_Chr8g0337361 | 96.501 | 343 | 12 | 0 | 1 | 343 | 60 | 402 | 0.0 | 680 |
| Msa1229770 | MtrunA17_Chr8g0337371 | 87.464 | 343 | 42 | 1 | 1 | 343 | 496 | 837 | 0.0 | 624 |
| Msa1229770 | MtrunA17_Chr8g0337371 | 86.350 | 337 | 45 | 1 | 1 | 337 | 49 | 384 | 0.0 | 602 |
| Msa1229770 | MtrunA17_Chr8g0337491 | 81.408 | 355 | 52 | 2 | 1 | 342 | 1 | 354 | 0.0 | 591 |
| Msa1229770 | MtrunA17_Chr8g0337491 | 77.778 | 54 | 12 | 0 | 1 | 54 | 367 | 420 | 5.56e-22 | 95.9 |
| Msa1229770 | MtrunA17_Chr8g0337471 | 81.159 | 345 | 62 | 2 | 1 | 343 | 1 | 344 | 0.0 | 579 |
| Msa1229770 | MtrunA17_Chr8g0337451 | 80.870 | 345 | 63 | 2 | 1 | 343 | 1 | 344 | 0.0 | 571 |
| Msa1229770 | MtrunA17_Chr8g0337481 | 86.765 | 272 | 36 | 0 | 72 | 343 | 14 | 285 | 1.91e-177 | 493 |
| Msa1229770 | MtrunA17_Chr4g0043061 | 67.544 | 342 | 108 | 2 | 4 | 343 | 10 | 350 | 4.35e-167 | 469 |
| Msa1229770 | MtrunA17_Chr8g0335881 | 96.330 | 218 | 8 | 0 | 1 | 218 | 1 | 218 | 1.80e-154 | 432 |
| Msa1229770 | MtrunA17_Chr7g0214831 | 61.449 | 345 | 130 | 3 | 1 | 343 | 3 | 346 | 8.09e-149 | 423 |
| Msa1229770 | MtrunA17_Chr2g0307121 | 47.977 | 346 | 174 | 2 | 3 | 343 | 2 | 346 | 2.18e-114 | 335 |
| Msa1229770 | MtrunA17_Chr2g0322531 | 41.954 | 348 | 186 | 9 | 4 | 340 | 5 | 347 | 8.37e-80 | 247 |
| Msa1229770 | MtrunA17_Chr2g0322551 | 43.434 | 297 | 159 | 6 | 30 | 318 | 31 | 326 | 1.49e-73 | 231 |
| Msa1229770 | MtrunA17_Chr2g0322541 | 39.144 | 327 | 182 | 9 | 4 | 318 | 5 | 326 | 1.97e-68 | 219 |
| Msa1229770 | MtrunA17_Chr5g0445921 | 57.812 | 128 | 54 | 0 | 214 | 341 | 9 | 136 | 6.62e-50 | 163 |
| Msa1229770 | MtrunA17_Chr4g0045061 | 33.333 | 243 | 147 | 6 | 105 | 340 | 388 | 622 | 8.25e-27 | 111 |
| Msa1229770 | MtrunA17_Chr4g0045041 | 35.407 | 209 | 127 | 5 | 138 | 340 | 416 | 622 | 2.74e-26 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1229770 | AT5G16970.1 | 70.760 | 342 | 95 | 3 | 6 | 343 | 5 | 345 | 5.63e-179 | 499 |
| Msa1229770 | AT1G26320.1 | 71.512 | 344 | 93 | 3 | 4 | 343 | 9 | 351 | 7.22e-179 | 499 |
| Msa1229770 | AT3G03080.1 | 71.304 | 345 | 95 | 2 | 2 | 343 | 7 | 350 | 1.26e-178 | 499 |
| Msa1229770 | AT5G17000.1 | 70.760 | 342 | 95 | 3 | 6 | 343 | 5 | 345 | 5.14e-178 | 497 |
| Msa1229770 | AT5G16990.1 | 70.088 | 341 | 98 | 4 | 6 | 343 | 4 | 343 | 8.18e-175 | 489 |
| Msa1229770 | AT1G26320.2 | 70.349 | 344 | 92 | 4 | 4 | 343 | 9 | 346 | 1.88e-174 | 488 |
| Msa1229770 | AT5G37980.1 | 66.764 | 343 | 108 | 3 | 6 | 343 | 12 | 353 | 1.65e-170 | 478 |
| Msa1229770 | AT5G37940.1 | 66.181 | 343 | 110 | 3 | 6 | 343 | 12 | 353 | 4.04e-169 | 475 |
| Msa1229770 | AT5G16960.2 | 66.667 | 345 | 110 | 3 | 1 | 341 | 1 | 344 | 6.88e-168 | 471 |
| Msa1229770 | AT5G16960.1 | 66.667 | 345 | 110 | 3 | 1 | 341 | 1 | 344 | 6.88e-168 | 471 |
| Msa1229770 | AT5G38000.1 | 64.809 | 341 | 114 | 3 | 6 | 341 | 12 | 351 | 7.19e-164 | 461 |
| Msa1229770 | AT5G38000.3 | 64.095 | 337 | 112 | 4 | 6 | 334 | 12 | 347 | 2.10e-158 | 447 |
| Msa1229770 | AT3G59845.1 | 64.348 | 345 | 113 | 6 | 4 | 341 | 5 | 346 | 2.13e-155 | 440 |
| Msa1229770 | AT5G38000.2 | 60.997 | 341 | 108 | 4 | 6 | 341 | 12 | 332 | 4.81e-148 | 421 |
| Msa1229770 | AT1G65560.1 | 58.551 | 345 | 137 | 5 | 4 | 343 | 7 | 350 | 7.72e-135 | 388 |
| Msa1229770 | AT5G16980.2 | 58.309 | 343 | 105 | 4 | 1 | 343 | 1 | 305 | 7.53e-134 | 384 |
| Msa1229770 | AT5G16980.1 | 76.106 | 226 | 54 | 0 | 118 | 343 | 14 | 239 | 7.47e-125 | 358 |
| Msa1229770 | AT5G16980.3 | 76.106 | 226 | 54 | 0 | 118 | 343 | 14 | 239 | 7.47e-125 | 358 |
| Msa1229770 | AT3G59845.2 | 71.020 | 245 | 69 | 2 | 98 | 341 | 1 | 244 | 1.44e-121 | 350 |
| Msa1229770 | AT1G65560.2 | 61.255 | 271 | 101 | 3 | 77 | 343 | 4 | 274 | 3.01e-113 | 330 |
| Msa1229770 | AT5G17000.2 | 69.725 | 218 | 61 | 3 | 6 | 219 | 5 | 221 | 5.80e-107 | 313 |
| Msa1229770 | AT1G49670.1 | 35.407 | 209 | 127 | 5 | 138 | 340 | 412 | 618 | 6.80e-26 | 108 |
| Msa1229770 | AT1G49670.2 | 35.468 | 203 | 123 | 5 | 144 | 340 | 441 | 641 | 1.46e-24 | 105 |
| Msa1229770 | AT5G37960.1 | 54.667 | 75 | 34 | 0 | 264 | 338 | 27 | 101 | 1.67e-18 | 80.5 |
Find 99 sgRNAs with CRISPR-Local
Find 339 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTCTTCTTTGTAGTTAA+AGG | 0.159741 | 8_2:-5720482 | None:intergenic |
| AACCATGCAATTTGGCAAAT+TGG | 0.212138 | 8_2:-5720106 | None:intergenic |
| TAGTTTGGGGAATGACTAAA+TGG | 0.237323 | 8_2:+5719785 | Msa1229770:CDS |
| TCATCTTTATACAAAATTCT+TGG | 0.259580 | 8_2:+5721038 | Msa1229770:CDS |
| ACCTGAAGGTGTCACAAATT+TGG | 0.261566 | 8_2:+5720960 | Msa1229770:CDS |
| CTTGTGCATGGAGCACTCTT+TGG | 0.275860 | 8_2:+5721282 | Msa1229770:three_prime_UTR |
| AAAACTGTCTCTCCTTTCTT+AGG | 0.278383 | 8_2:-5720044 | None:intergenic |
| AAGTAAATGTCGATGCCTTC+TGG | 0.282317 | 8_2:-5720835 | None:intergenic |
| AAATCATCTTTCTTATAATC+TGG | 0.299191 | 8_2:-5719763 | None:intergenic |
| TTTCTCACTTGTGCCATGTT+TGG | 0.306479 | 8_2:-5718468 | None:intergenic |
| TAAGAAAGATGATTTAGTTT+GGG | 0.308474 | 8_2:+5719771 | Msa1229770:CDS |
| GCCAAATTTGTGACACCTTC+AGG | 0.309515 | 8_2:-5720961 | None:intergenic |
| ATAAGAAAGATGATTTAGTT+TGG | 0.311139 | 8_2:+5719770 | Msa1229770:CDS |
| AACATAGCAACCATGCAATT+TGG | 0.315125 | 8_2:-5720114 | None:intergenic |
| TTGAAAAGTATTTCAGTTGC+AGG | 0.321684 | 8_2:-5719826 | None:intergenic |
| TGAGAATGGCCCTGCAGCTT+TGG | 0.335929 | 8_2:+5721125 | Msa1229770:CDS |
| GGTGCTGTTGGTCAACTTGT+TGG | 0.364308 | 8_2:+5720083 | Msa1229770:CDS |
| AGCACTCTTTGGATGACCTT+TGG | 0.368252 | 8_2:+5721293 | Msa1229770:three_prime_UTR |
| TGCTATGTTGTTGGAAGTGC+TGG | 0.374726 | 8_2:+5720128 | Msa1229770:CDS |
| CAATAGTGTCCTTGGCCATC+AGG | 0.381937 | 8_2:-5718647 | None:intergenic |
| TTTGAGAAGAACAACATCAT+TGG | 0.385374 | 8_2:-5718589 | None:intergenic |
| TTGCAGCCATTGACAGGATT+AGG | 0.387244 | 8_2:+5719712 | Msa1229770:intron |
| GTCCCGCTTTCCTACTATAC+TGG | 0.392986 | 8_2:+5719865 | Msa1229770:CDS |
| ACTTGTGCCATGTTTGGAAT+TGG | 0.395712 | 8_2:-5718462 | None:intergenic |
| GTGTCTAAAGTTGTAGAATC+TGG | 0.408050 | 8_2:+5719736 | Msa1229770:CDS |
| TCCTACTATACTGGAATTCT+CGG | 0.415079 | 8_2:+5719874 | Msa1229770:CDS |
| GCTTTGGTTGGTCTGTTTAG+TGG | 0.421611 | 8_2:+5721141 | Msa1229770:CDS |
| GGACTTGGTGGTCTCACCCC+TGG | 0.422269 | 8_2:+5718672 | Msa1229770:CDS |
| ATATCATATATAAGCGGATT+CGG | 0.434543 | 8_2:+5720986 | Msa1229770:CDS |
| CCAGCATAAGCAGTCATTCC+CGG | 0.444732 | 8_2:-5720002 | None:intergenic |
| TATGCTGGTTTCTTTGAAGT+AGG | 0.445138 | 8_2:+5720017 | Msa1229770:CDS |
| ATGGCCAAGGACACTATTGC+AGG | 0.448653 | 8_2:+5718651 | Msa1229770:CDS |
| GAGTAATTGCAGCCATTGAC+AGG | 0.454761 | 8_2:+5719706 | Msa1229770:intron |
| AGAAGGAAAGGTTGTGTATG+TGG | 0.461025 | 8_2:+5721083 | Msa1229770:CDS |
| AATGGCCCTGCAGCTTTGGT+TGG | 0.462636 | 8_2:+5721129 | Msa1229770:CDS |
| CCTTGGCCATCAGGATTCTC+AGG | 0.463885 | 8_2:-5718638 | None:intergenic |
| AAGAATGAATGGAAATGCTT+TGG | 0.465798 | 8_2:+5721207 | Msa1229770:three_prime_UTR |
| TCATCTGCCTCTGGTGCTGT+TGG | 0.469392 | 8_2:+5720071 | Msa1229770:CDS |
| TAAATGGGAAGAGTATAGTT+TGG | 0.470092 | 8_2:+5719801 | Msa1229770:CDS |
| ACCTCGATGCAGCTTTGAAA+AGG | 0.476543 | 8_2:+5720506 | Msa1229770:CDS |
| ACGTTCATGTCTGATTCCTT+AGG | 0.476904 | 8_2:-5718528 | None:intergenic |
| TTGCATGGTTGCTATGTTGT+TGG | 0.478375 | 8_2:+5720119 | Msa1229770:CDS |
| TTGTTTGAGTACAGGTATGC+CGG | 0.481096 | 8_2:+5719983 | Msa1229770:intron |
| CTCATGAGTGAAAGAATGAA+TGG | 0.483174 | 8_2:+5721196 | Msa1229770:exon |
| TGTGTTTAGTTACTTGTGCA+TGG | 0.483214 | 8_2:+5721270 | Msa1229770:three_prime_UTR |
| GACACTATTGCAGGACTTGG+TGG | 0.484411 | 8_2:+5718660 | Msa1229770:CDS |
| AACAGACCAACCAAAGCTGC+AGG | 0.494837 | 8_2:-5721135 | None:intergenic |
| GATAATTACAATCAACAGAA+TGG | 0.498171 | 8_2:-5721328 | None:intergenic |
| TGAGAGTTGGTTGAGTCGTG+TGG | 0.501946 | 8_2:-5718373 | None:intergenic |
| ACCGAGAATTCCAGTATAGT+AGG | 0.503877 | 8_2:-5719875 | None:intergenic |
| CCGGGAATGACTGCTTATGC+TGG | 0.504351 | 8_2:+5720002 | Msa1229770:CDS |
| AAGTCCTGCAATAGTGTCCT+TGG | 0.515317 | 8_2:-5718655 | None:intergenic |
| GATTCTCAGGTAAGGATCAC+AGG | 0.521205 | 8_2:-5718625 | None:intergenic |
| AAGAAAGATGATTTAGTTTG+GGG | 0.523463 | 8_2:+5719772 | Msa1229770:CDS |
| GAGAGTTGGTTGAGTCGTGT+GGG | 0.524331 | 8_2:-5718372 | None:intergenic |
| CAGAAAGTGATGAATGAAGA+AGG | 0.526668 | 8_2:-5718418 | None:intergenic |
| GTCTCTTATAAGAGAAGGAA+AGG | 0.527141 | 8_2:+5721071 | Msa1229770:CDS |
| CTGTTTAGTGGTCAAAATGT+TGG | 0.532048 | 8_2:+5721153 | Msa1229770:CDS |
| ATAGCTGAGGGTCTTGAGAA+TGG | 0.533886 | 8_2:+5721111 | Msa1229770:CDS |
| CTCTTGAATATGAAACTCCA+TGG | 0.534749 | 8_2:+5720892 | Msa1229770:CDS |
| GAAGTAGGCTCTCCTAAGAA+AGG | 0.539150 | 8_2:+5720032 | Msa1229770:CDS |
| TGAAAAGTATTTCAGTTGCA+GGG | 0.540772 | 8_2:-5719825 | None:intergenic |
| GACATTTACTTTGAGAACGT+TGG | 0.545762 | 8_2:+5720847 | Msa1229770:CDS |
| TTCCAGTATAGTAGGAAAGC+GGG | 0.546840 | 8_2:-5719867 | None:intergenic |
| GACACTCCTAATCCTGTCAA+TGG | 0.548059 | 8_2:-5719718 | None:intergenic |
| GTATTGTCTCTTATAAGAGA+AGG | 0.553750 | 8_2:+5721066 | Msa1229770:CDS |
| AGTTTGGGGAATGACTAAAT+GGG | 0.554508 | 8_2:+5719786 | Msa1229770:CDS |
| CACACACAGGTATGCGCCCA+TGG | 0.561199 | 8_2:-5720909 | None:intergenic |
| ATTTACTTTGAGAACGTTGG+AGG | 0.562529 | 8_2:+5720850 | Msa1229770:CDS |
| GCCATCAGGATTCTCAGGTA+AGG | 0.564370 | 8_2:-5718633 | None:intergenic |
| TGTTTGAGTACAGGTATGCC+GGG | 0.570748 | 8_2:+5719984 | Msa1229770:intron |
| GACACAAATGTGTTGAGAGT+TGG | 0.571167 | 8_2:-5718386 | None:intergenic |
| GGCCAATTTGCCAAATTGCA+TGG | 0.571871 | 8_2:+5720104 | Msa1229770:CDS |
| CATATATAAGCGGATTCGGA+TGG | 0.577990 | 8_2:+5720990 | Msa1229770:CDS |
| AACTAAACCAATTCCAAACA+TGG | 0.579023 | 8_2:+5718455 | Msa1229770:exon |
| AAGGACACTATTGCAGGACT+TGG | 0.579832 | 8_2:+5718657 | Msa1229770:CDS |
| CCTGAGAATCCTGATGGCCA+AGG | 0.590391 | 8_2:+5718638 | Msa1229770:CDS |
| AATCAACAGAATGGATGAAG+AGG | 0.597589 | 8_2:-5721319 | None:intergenic |
| TATAAGCGGATTCGGATGGA+AGG | 0.599880 | 8_2:+5720994 | Msa1229770:CDS |
| ACAACATCATTGGAACCTTG+TGG | 0.608276 | 8_2:-5718579 | None:intergenic |
| ATAGCATGACATACAGAACC+AGG | 0.609222 | 8_2:-5718690 | None:intergenic |
| AAGTGCTGGAAGTAAAGAGA+AGG | 0.616160 | 8_2:+5720142 | Msa1229770:CDS |
| TCCTTACCTGAGAATCCTGA+TGG | 0.622090 | 8_2:+5718632 | Msa1229770:CDS |
| TAAACTAGATACTTTCCAGA+AGG | 0.622571 | 8_2:+5720820 | Msa1229770:intron |
| CATCATTGGAACCTTGTGGA+AGG | 0.629559 | 8_2:-5718575 | None:intergenic |
| TCTTGAATATGAAACTCCAT+GGG | 0.636007 | 8_2:+5720893 | Msa1229770:CDS |
| AAGTTGACCAACAGCACCAG+AGG | 0.637825 | 8_2:-5720078 | None:intergenic |
| ATTCCAGTATAGTAGGAAAG+CGG | 0.640802 | 8_2:-5719868 | None:intergenic |
| TGGCACATATCATATATAAG+CGG | 0.642495 | 8_2:+5720980 | Msa1229770:CDS |
| TACAATCTTACTCAACCTGA+AGG | 0.650544 | 8_2:+5720946 | Msa1229770:CDS |
| ATTACTCTCAACCTTCCACA+AGG | 0.655246 | 8_2:+5718564 | Msa1229770:CDS |
| ATGGATGAAGAGGTTTCCAA+AGG | 0.665861 | 8_2:-5721309 | None:intergenic |
| ACAGACCAACCAAAGCTGCA+GGG | 0.668442 | 8_2:-5721134 | None:intergenic |
| CATGGGCGCATACCTGTGTG+TGG | 0.680594 | 8_2:+5720910 | Msa1229770:CDS |
| AGCATGACATACAGAACCAG+GGG | 0.683293 | 8_2:-5718688 | None:intergenic |
| TGTGAGATCATTCCACACAC+AGG | 0.692179 | 8_2:-5720922 | None:intergenic |
| TAGCATGACATACAGAACCA+GGG | 0.696996 | 8_2:-5718689 | None:intergenic |
| GTATGTGGAAGACATAGCTG+AGG | 0.744288 | 8_2:+5721098 | Msa1229770:CDS |
| TATGTGGAAGACATAGCTGA+GGG | 0.752621 | 8_2:+5721099 | Msa1229770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAATTATAATTTTTTTT+TGG | - | chr8_2:5721531-5721550 | None:intergenic | 0.0% |
| !!! | ATTATATATAAAATTGACTT+TGG | + | chr8_2:5718863-5718882 | Msa1229770:intron | 10.0% |
| !!! | TTATATATAAAATTGACTTT+GGG | + | chr8_2:5718864-5718883 | Msa1229770:intron | 10.0% |
| !! | ATTTAGTTGAAAAATAAAAA+TGG | + | chr8_2:5721428-5721447 | Msa1229770:intron | 10.0% |
| !!! | AAGTTTAAATTTTTTAACAA+TGG | - | chr8_2:5721622-5721641 | None:intergenic | 10.0% |
| !!! | TAAAAAAATTCTTCAATTTT+TGG | - | chr8_2:5721691-5721710 | None:intergenic | 10.0% |
| !!! | AAAATTGAAGAATTTTTTTA+AGG | + | chr8_2:5721691-5721710 | Msa1229770:intron | 10.0% |
| !!! | AAATTGAAGAATTTTTTTAA+GGG | + | chr8_2:5721692-5721711 | Msa1229770:intron | 10.0% |
| !! | TAAAAGTTGAAATTAAATTA+AGG | + | chr8_2:5721724-5721743 | Msa1229770:intron | 10.0% |
| !!! | AAAAATACTATTTTCAATTT+TGG | + | chr8_2:5722876-5722895 | Msa1229770:intron | 10.0% |
| !!! | AATTGATTTTAACATTTCAA+AGG | + | chr8_2:5718817-5718836 | Msa1229770:intron | 15.0% |
| !!! | TTTTTTTTTGTTTGTAAACT+TGG | - | chr8_2:5719139-5719158 | None:intergenic | 15.0% |
| !! | TATTCATTTAGTATAATTAC+AGG | - | chr8_2:5720408-5720427 | None:intergenic | 15.0% |
| !!! | GATTTGTTGAAAAATAAATT+TGG | + | chr8_2:5720448-5720467 | Msa1229770:CDS | 15.0% |
| !!! | CTATGAATTTTCATTTTTTT+GGG | - | chr8_2:5721590-5721609 | None:intergenic | 15.0% |
| !!! | ACTATGAATTTTCATTTTTT+TGG | - | chr8_2:5721591-5721610 | None:intergenic | 15.0% |
| !!! | AAAAATTTAAACTTTTGCAA+AGG | + | chr8_2:5721628-5721647 | Msa1229770:intron | 15.0% |
| !!! | AATTGAAGAATTTTTTTAAG+GGG | + | chr8_2:5721693-5721712 | Msa1229770:intron | 15.0% |
| !!! | ATTAAATTAAGGAACAATTT+TGG | + | chr8_2:5721735-5721754 | Msa1229770:intron | 15.0% |
| !!! | AAAATCATAGGTTTTTTTTA+GGG | - | chr8_2:5722750-5722769 | None:intergenic | 15.0% |
| !!! | AAAAATCATAGGTTTTTTTT+AGG | - | chr8_2:5722751-5722770 | None:intergenic | 15.0% |
| !! | AATATCAATTTATGCAAATT+AGG | + | chr8_2:5723306-5723325 | Msa1229770:intron | 15.0% |
| !!! | ATACTTTGTCTTTTAAAATC+AGG | - | chr8_2:5718843-5718862 | None:intergenic | 20.0% |
| !! | AATATCAAGGCTATAAATAA+TGG | + | chr8_2:5719428-5719447 | Msa1229770:intron | 20.0% |
| !! | AAAGTTAGTTATAATGTGTA+TGG | - | chr8_2:5719581-5719600 | None:intergenic | 20.0% |
| !! | CATTATAGTTACTTAGTTTA+TGG | - | chr8_2:5719623-5719642 | None:intergenic | 20.0% |
| !! | AAGTAACTATAATGAAGTTA+TGG | + | chr8_2:5719629-5719648 | Msa1229770:intron | 20.0% |
| !! | AAATCATCTTTCTTATAATC+TGG | - | chr8_2:5719766-5719785 | None:intergenic | 20.0% |
| !! | ATAAGAAAGATGATTTAGTT+TGG | + | chr8_2:5719770-5719789 | Msa1229770:CDS | 20.0% |
| !!! | TAAGAAAGATGATTTAGTTT+GGG | + | chr8_2:5719771-5719790 | Msa1229770:CDS | 20.0% |
| !! | ACATTTGATTAATCATTCTA+CGG | + | chr8_2:5720237-5720256 | Msa1229770:intron | 20.0% |
| !!! | CTATTTTAAATTTTGGAAAC+CGG | + | chr8_2:5720362-5720381 | Msa1229770:intron | 20.0% |
| !! | TTAGTATAATTACAGGATAA+TGG | - | chr8_2:5720401-5720420 | None:intergenic | 20.0% |
| !! | CATACACACAAATAATAATT+TGG | - | chr8_2:5720719-5720738 | None:intergenic | 20.0% |
| !! | ATTATTATTTGTGTGTATGT+AGG | + | chr8_2:5720720-5720739 | Msa1229770:intron | 20.0% |
| !! | TCATCTTTATACAAAATTCT+TGG | + | chr8_2:5721038-5721057 | Msa1229770:CDS | 20.0% |
| !!! | TGTTTTAAACATAACTTTTG+AGG | + | chr8_2:5721663-5721682 | Msa1229770:intron | 20.0% |
| !!! | GTTTTAAACATAACTTTTGA+GGG | + | chr8_2:5721664-5721683 | Msa1229770:intron | 20.0% |
| !! | AAATCATCTTTCTTATAATC+TGG | - | chr8_2:5719766-5719785 | None:intergenic | 20.0% |
| !! | ATAAGAAAGATGATTTAGTT+TGG | + | chr8_2:5719770-5719789 | Msa1229770:CDS | 20.0% |
| !!! | TGATAATTCATCATTTTTAC+AGG | - | chr8_2:5722722-5722741 | None:intergenic | 20.0% |
| !!! | AAATCATAGGTTTTTTTTAG+GGG | - | chr8_2:5722749-5722768 | None:intergenic | 20.0% |
| !! | ACAGTAGAATAAAAAATCAT+AGG | - | chr8_2:5722762-5722781 | None:intergenic | 20.0% |
| !!! | GTCTGTTATTAACATTTTTA+TGG | + | chr8_2:5723021-5723040 | Msa1229770:intron | 20.0% |
| !!! | TCACCTTTATACAAAATTTT+TGG | + | chr8_2:5723538-5723557 | Msa1229770:intron | 20.0% |
| !!! | ACTCCAAAAATTTTGTATAA+AGG | - | chr8_2:5723544-5723563 | None:intergenic | 20.0% |
| !! | TATTCATGAATAGTTTGTCT+TGG | + | chr8_2:5718729-5718748 | Msa1229770:intron | 25.0% |
| !!! | TTGTTGTTGCTTTTGAAATT+AGG | + | chr8_2:5718764-5718783 | Msa1229770:intron | 25.0% |
| ! | CAATAAAGTTTGATTAGTGT+GGG | - | chr8_2:5718924-5718943 | None:intergenic | 25.0% |
| !!! | TTTTGTTTGTAAACTTGGTA+TGG | - | chr8_2:5719134-5719153 | None:intergenic | 25.0% |
| ! | TGTAATCTGTTTAGAGAAAA+TGG | - | chr8_2:5719185-5719204 | None:intergenic | 25.0% |
| ! | ATTATTTAATGACCCAAGAA+AGG | + | chr8_2:5719270-5719289 | Msa1229770:intron | 25.0% |
| ! | ATCATAATCTTTACCTACTT+GGG | - | chr8_2:5719314-5719333 | None:intergenic | 25.0% |
| ! | AGTTGCATTAGATAATATAG+AGG | + | chr8_2:5719339-5719358 | Msa1229770:intron | 25.0% |
| !! | AAGGAGAAATTACTCTAAAA+AGG | - | chr8_2:5719532-5719551 | None:intergenic | 25.0% |
| !!! | AAGAAAGATGATTTAGTTTG+GGG | + | chr8_2:5719772-5719791 | Msa1229770:CDS | 25.0% |
| ! | TGTTAATTCATCATTTATGC+AGG | - | chr8_2:5720214-5720233 | None:intergenic | 25.0% |
| ! | TAATGGTTGTAATTATGTAC+CGG | - | chr8_2:5720384-5720403 | None:intergenic | 25.0% |
| ! | TTTCTCTTCTTTGTAGTTAA+AGG | - | chr8_2:5720485-5720504 | None:intergenic | 25.0% |
| ! | CTTCATAGATAGTTATTACT+TGG | + | chr8_2:5720756-5720775 | Msa1229770:intron | 25.0% |
| !! | ATATCATATATAAGCGGATT+CGG | + | chr8_2:5720986-5721005 | Msa1229770:CDS | 25.0% |
| ! | GATAATTACAATCAACAGAA+TGG | - | chr8_2:5721331-5721350 | None:intergenic | 25.0% |
| ! | AATGAATCAGCAAAAATATG+AGG | - | chr8_2:5721397-5721416 | None:intergenic | 25.0% |
| ! | TGTCAAAAAACACAACAAAA+TGG | - | chr8_2:5722477-5722496 | None:intergenic | 25.0% |
| !!! | TAAACATTCTCTCCTTTTTT+AGG | - | chr8_2:5722573-5722592 | None:intergenic | 25.0% |
| ! | GATCTCTTGAAGAATAAATT+TGG | + | chr8_2:5722941-5722960 | Msa1229770:intron | 25.0% |
| !! | AAATCATATATAAGCGGATT+CGG | + | chr8_2:5723486-5723505 | Msa1229770:intron | 25.0% |
| ! | AGTGAATCAGCAAAAATATA+AGG | - | chr8_2:5723884-5723903 | None:intergenic | 25.0% |
| AACTAAACCAATTCCAAACA+TGG | + | chr8_2:5718455-5718474 | Msa1229770:exon | 30.0% | |
| TTTGAGAAGAACAACATCAT+TGG | - | chr8_2:5718592-5718611 | None:intergenic | 30.0% | |
| !! | TAGTTTGTCTTGGATTTTGA+AGG | + | chr8_2:5718739-5718758 | Msa1229770:intron | 30.0% |
| ! | AGTTTGTCTTGGATTTTGAA+GGG | + | chr8_2:5718740-5718759 | Msa1229770:intron | 30.0% |
| !!! | TTGCTTTTGAAATTAGGAAG+TGG | + | chr8_2:5718770-5718789 | Msa1229770:intron | 30.0% |
| !!! | TGCTTTTGAAATTAGGAAGT+GGG | + | chr8_2:5718771-5718790 | Msa1229770:intron | 30.0% |
| GCAATAAAGTTTGATTAGTG+TGG | - | chr8_2:5718925-5718944 | None:intergenic | 30.0% | |
| TATTATCTTGAGCCTTTCTT+GGG | - | chr8_2:5719285-5719304 | None:intergenic | 30.0% | |
| CATCATAATCTTTACCTACT+TGG | - | chr8_2:5719315-5719334 | None:intergenic | 30.0% | |
| GTGAAGTTGTTAGAATATCA+AGG | + | chr8_2:5719415-5719434 | Msa1229770:intron | 30.0% | |
| ! | TAAATGGGAAGAGTATAGTT+TGG | + | chr8_2:5719801-5719820 | Msa1229770:CDS | 30.0% |
| !! | TGAAAAGTATTTCAGTTGCA+GGG | - | chr8_2:5719828-5719847 | None:intergenic | 30.0% |
| !! | TTGAAAAGTATTTCAGTTGC+AGG | - | chr8_2:5719829-5719848 | None:intergenic | 30.0% |
| !! | TTGTGTTTTTGTTTGAGTAC+AGG | + | chr8_2:5719975-5719994 | Msa1229770:intron | 30.0% |
| GAATATAATTATGACACACC+AGG | + | chr8_2:5720423-5720442 | Msa1229770:intron | 30.0% | |
| !! | TATTTTTCAACAAATCCACC+TGG | - | chr8_2:5720444-5720463 | None:intergenic | 30.0% |
| !!! | GTCTGTTTCTAACAGTTTTA+TGG | + | chr8_2:5720528-5720547 | Msa1229770:intron | 30.0% |
| !! | GAATATAAAGTGTTGATGCT+AGG | - | chr8_2:5720599-5720618 | None:intergenic | 30.0% |
| GCATCAACACTTTATATTCA+AGG | + | chr8_2:5720600-5720619 | Msa1229770:intron | 30.0% | |
| TAAACTAGATACTTTCCAGA+AGG | + | chr8_2:5720820-5720839 | Msa1229770:intron | 30.0% | |
| TCTTGAATATGAAACTCCAT+GGG | + | chr8_2:5720893-5720912 | Msa1229770:CDS | 30.0% | |
| TGGCACATATCATATATAAG+CGG | + | chr8_2:5720980-5720999 | Msa1229770:CDS | 30.0% | |
| GTATTGTCTCTTATAAGAGA+AGG | + | chr8_2:5721066-5721085 | Msa1229770:CDS | 30.0% | |
| AAGAATGAATGGAAATGCTT+TGG | + | chr8_2:5721207-5721226 | Msa1229770:three_prime_UTR | 30.0% | |
| TAAATGTACAAACCAATGTG+TGG | + | chr8_2:5721785-5721804 | Msa1229770:intron | 30.0% | |
| TTGTGTCACAAAAATCTTTG+TGG | - | chr8_2:5721846-5721865 | None:intergenic | 30.0% | |
| ATGTTCATGTCTGATTCTTT+AGG | - | chr8_2:5721931-5721950 | None:intergenic | 30.0% | |
| AACATAGTTGCAATTGATCA+AGG | + | chr8_2:5722150-5722169 | Msa1229770:intron | 30.0% | |
| ! | TAGTTTGGAGTCTTACTAAA+TGG | + | chr8_2:5722310-5722329 | Msa1229770:intron | 30.0% |
| ! | AGTTTGGAGTCTTACTAAAT+GGG | + | chr8_2:5722311-5722330 | Msa1229770:intron | 30.0% |
| ! | TAAATGGGAAGAGTATAGTT+TGG | + | chr8_2:5719801-5719820 | Msa1229770:CDS | 30.0% |
| ! | ATTTTGAACATTCCAGTTGT+AGG | - | chr8_2:5722354-5722373 | None:intergenic | 30.0% |
| AGCATATATACCAAGAATTC+CGG | - | chr8_2:5722409-5722428 | None:intergenic | 30.0% | |
| !! | TATGCTGGTTTCTTTGAATT+AGG | + | chr8_2:5722543-5722562 | Msa1229770:intron | 30.0% |
| GAATCATCGTTCTTATAATC+TGG | + | chr8_2:5722907-5722926 | Msa1229770:intron | 30.0% | |
| TGGTTCTTCTTTGTAGTTAA+AGG | - | chr8_2:5722978-5722997 | None:intergenic | 30.0% | |
| !! | ATAAAGTATCGATGCTACAT+AGG | - | chr8_2:5723089-5723108 | None:intergenic | 30.0% |
| ! | GCATCGATACTTTATATTGA+AGG | + | chr8_2:5723094-5723113 | Msa1229770:intron | 30.0% |
| CTATGTATCAGTGTTAGTAT+CGG | + | chr8_2:5723211-5723230 | Msa1229770:intron | 30.0% | |
| TGGCACAAATCATATATAAG+CGG | + | chr8_2:5723480-5723499 | Msa1229770:intron | 30.0% | |
| ATGAATGAATGCATATGCTT+TGG | + | chr8_2:5723699-5723718 | Msa1229770:intron | 30.0% | |
| CAGAAAGTGATGAATGAAGA+AGG | - | chr8_2:5718421-5718440 | None:intergenic | 35.0% | |
| !! | ATTTTGAGAGACTATGTGTC+TGG | + | chr8_2:5718501-5718520 | Msa1229770:CDS | 35.0% |
| !!! | GCTTTTGAAATTAGGAAGTG+GGG | + | chr8_2:5718772-5718791 | Msa1229770:intron | 35.0% |
| AACTTTATTGCTAACCCACT+TGG | + | chr8_2:5718934-5718953 | Msa1229770:intron | 35.0% | |
| ACTTTATTGCTAACCCACTT+GGG | + | chr8_2:5718935-5718954 | Msa1229770:intron | 35.0% | |
| GTTGGACTCTTTAGATTAGT+TGG | + | chr8_2:5719101-5719120 | Msa1229770:intron | 35.0% | |
| CTATTATCTTGAGCCTTTCT+TGG | - | chr8_2:5719286-5719305 | None:intergenic | 35.0% | |
| GATAATAGAATAGCCCAAGT+AGG | + | chr8_2:5719298-5719317 | Msa1229770:intron | 35.0% | |
| AGTAATTTCTCCTTCCTTGT+AGG | + | chr8_2:5719538-5719557 | Msa1229770:intron | 35.0% | |
| !! | TATGGTTACAGTTTGTTGAC+TGG | + | chr8_2:5719647-5719666 | Msa1229770:intron | 35.0% |
| !! | ATGGTTACAGTTTGTTGACT+GGG | + | chr8_2:5719648-5719667 | Msa1229770:intron | 35.0% |
| ! | GTGTCTAAAGTTGTAGAATC+TGG | + | chr8_2:5719736-5719755 | Msa1229770:CDS | 35.0% |
| TAGTTTGGGGAATGACTAAA+TGG | + | chr8_2:5719785-5719804 | Msa1229770:CDS | 35.0% | |
| AGTTTGGGGAATGACTAAAT+GGG | + | chr8_2:5719786-5719805 | Msa1229770:CDS | 35.0% | |
| ATTCCAGTATAGTAGGAAAG+CGG | - | chr8_2:5719871-5719890 | None:intergenic | 35.0% | |
| TCCTACTATACTGGAATTCT+CGG | + | chr8_2:5719874-5719893 | Msa1229770:CDS | 35.0% | |
| TGTCATGAATCACAACGAAA+TGG | - | chr8_2:5719951-5719970 | None:intergenic | 35.0% | |
| !! | TATGCTGGTTTCTTTGAAGT+AGG | + | chr8_2:5720017-5720036 | Msa1229770:CDS | 35.0% |
| AAAACTGTCTCTCCTTTCTT+AGG | - | chr8_2:5720047-5720066 | None:intergenic | 35.0% | |
| AACCATGCAATTTGGCAAAT+TGG | - | chr8_2:5720109-5720128 | None:intergenic | 35.0% | |
| AACATAGCAACCATGCAATT+TGG | - | chr8_2:5720117-5720136 | None:intergenic | 35.0% | |
| ! | GGATAGTGGTTATTGTAGTT+AGG | - | chr8_2:5720289-5720308 | None:intergenic | 35.0% |
| TATAATTATGACACACCAGG+TGG | + | chr8_2:5720426-5720445 | Msa1229770:intron | 35.0% | |
| ! | GACATTTACTTTGAGAACGT+TGG | + | chr8_2:5720847-5720866 | Msa1229770:CDS | 35.0% |
| ! | ATTTACTTTGAGAACGTTGG+AGG | + | chr8_2:5720850-5720869 | Msa1229770:CDS | 35.0% |
| CTCTTGAATATGAAACTCCA+TGG | + | chr8_2:5720892-5720911 | Msa1229770:CDS | 35.0% | |
| TACAATCTTACTCAACCTGA+AGG | + | chr8_2:5720946-5720965 | Msa1229770:CDS | 35.0% | |
| GTCTCTTATAAGAGAAGGAA+AGG | + | chr8_2:5721071-5721090 | Msa1229770:CDS | 35.0% | |
| CTGTTTAGTGGTCAAAATGT+TGG | + | chr8_2:5721153-5721172 | Msa1229770:CDS | 35.0% | |
| CTCATGAGTGAAAGAATGAA+TGG | + | chr8_2:5721196-5721215 | Msa1229770:exon | 35.0% | |
| TGTGTTTAGTTACTTGTGCA+TGG | + | chr8_2:5721270-5721289 | Msa1229770:three_prime_UTR | 35.0% | |
| AATCAACAGAATGGATGAAG+AGG | - | chr8_2:5721322-5721341 | None:intergenic | 35.0% | |
| GAACAAGCAAGTGATTCTAA+AGG | + | chr8_2:5721888-5721907 | Msa1229770:intron | 35.0% | |
| ! | ATTCTAAAGGACTATGTGTC+TGG | + | chr8_2:5721901-5721920 | Msa1229770:intron | 35.0% |
| AATTGATGAAAGAGAGAGCA+TGG | - | chr8_2:5722107-5722126 | None:intergenic | 35.0% | |
| ! | GTGTCTAAAGTTGTAGAATC+TGG | + | chr8_2:5719736-5719755 | Msa1229770:CDS | 35.0% |
| ! | TATAGTTTGGTTCCTACAAC+TGG | + | chr8_2:5722339-5722358 | Msa1229770:intron | 35.0% |
| TTCCGGTATAATAGGAAAGT+GGG | - | chr8_2:5722392-5722411 | None:intergenic | 35.0% | |
| ATTCCGGTATAATAGGAAAG+TGG | - | chr8_2:5722393-5722412 | None:intergenic | 35.0% | |
| TCCTATTATACCGGAATTCT+TGG | + | chr8_2:5722396-5722415 | Msa1229770:intron | 35.0% | |
| ACCAAGAATTCCGGTATAAT+AGG | - | chr8_2:5722400-5722419 | None:intergenic | 35.0% | |
| !! | TTACGCTTTTGTTTGAGTAC+AGG | + | chr8_2:5722501-5722520 | Msa1229770:intron | 35.0% |
| GAATTAGGCAGTCCTAAAAA+AGG | + | chr8_2:5722558-5722577 | Msa1229770:intron | 35.0% | |
| GGTCAATTTGCAAAATTGCA+TGG | + | chr8_2:5722630-5722649 | Msa1229770:intron | 35.0% | |
| TTGCATGGTTGTTATGTTGT+TGG | + | chr8_2:5722645-5722664 | Msa1229770:intron | 35.0% | |
| !! | AAGTGCTGGAACTAAAGAAA+AGG | + | chr8_2:5722668-5722687 | Msa1229770:intron | 35.0% |
| GGATTGTGGTTATTGCAATT+AGG | - | chr8_2:5722810-5722829 | None:intergenic | 35.0% | |
| TTCTTATAATCTGGCACACT+AGG | + | chr8_2:5722916-5722935 | Msa1229770:intron | 35.0% | |
| !! | ACCTCAATGCAGCTTTAAAA+AGG | + | chr8_2:5722999-5723018 | Msa1229770:intron | 35.0% |
| !!! | ACCTTTTTAAAGCTGCATTG+AGG | - | chr8_2:5723003-5723022 | None:intergenic | 35.0% |
| CATAGACACAGGCAATAATT+TGG | - | chr8_2:5723196-5723215 | None:intergenic | 35.0% | |
| TAACACTGATACATAGACAC+AGG | - | chr8_2:5723207-5723226 | None:intergenic | 35.0% | |
| ! | CTTTTGAATATGAGAGTCCA+TGG | + | chr8_2:5723392-5723411 | Msa1229770:intron | 35.0% |
| TCATTCCACTTACAGGTATA+CGG | - | chr8_2:5723418-5723437 | None:intergenic | 35.0% | |
| TACAATCTTACTCAACCTGA+AGG | + | chr8_2:5720946-5720965 | Msa1229770:CDS | 35.0% | |
| ACCTTTCCTTCTCTTATAAG+AGG | - | chr8_2:5721075-5721094 | None:intergenic | 35.0% | |
| CTTGTGTATGAAGCAATCTT+TGG | + | chr8_2:5723769-5723788 | Msa1229770:intron | 35.0% | |
| TGTATGAAGCAATCTTTGGA+TGG | + | chr8_2:5723773-5723792 | Msa1229770:intron | 35.0% | |
| !! | AATCAACAGAGTTGATGAAG+AGG | - | chr8_2:5723809-5723828 | None:intergenic | 35.0% |
| TCTTCATCAACTCTGTTGAT+TGG | + | chr8_2:5723808-5723827 | Msa1229770:intron | 35.0% | |
| GACACAAATGTGTTGAGAGT+TGG | - | chr8_2:5718389-5718408 | None:intergenic | 40.0% | |
| ! | ACTTGTGCCATGTTTGGAAT+TGG | - | chr8_2:5718465-5718484 | None:intergenic | 40.0% |
| TTTCTCACTTGTGCCATGTT+TGG | - | chr8_2:5718471-5718490 | None:intergenic | 40.0% | |
| !!! | CTATGTGTCTGGTTTTCCTA+AGG | + | chr8_2:5718512-5718531 | Msa1229770:CDS | 40.0% |
| ACGTTCATGTCTGATTCCTT+AGG | - | chr8_2:5718531-5718550 | None:intergenic | 40.0% | |
| ATTACTCTCAACCTTCCACA+AGG | + | chr8_2:5718564-5718583 | Msa1229770:CDS | 40.0% | |
| ACAACATCATTGGAACCTTG+TGG | - | chr8_2:5718582-5718601 | None:intergenic | 40.0% | |
| TAGCATGACATACAGAACCA+GGG | - | chr8_2:5718692-5718711 | None:intergenic | 40.0% | |
| ATAGCATGACATACAGAACC+AGG | - | chr8_2:5718693-5718712 | None:intergenic | 40.0% | |
| GTTAAGAGGAGCAAACTCTA+AGG | - | chr8_2:5718992-5719011 | None:intergenic | 40.0% | |
| TCTTAACGTTTCGATTCCCT+CGG | + | chr8_2:5719005-5719024 | Msa1229770:intron | 40.0% | |
| !! | GTGAGTCGTCATGTTTTAGA+AGG | + | chr8_2:5719361-5719380 | Msa1229770:intron | 40.0% |
| CACCTACGACTCATCATAAT+GGG | - | chr8_2:5719398-5719417 | None:intergenic | 40.0% | |
| TCACCTACGACTCATCATAA+TGG | - | chr8_2:5719399-5719418 | None:intergenic | 40.0% | |
| !! | GTGTATGGTACCACTTTTGA+TGG | - | chr8_2:5719566-5719585 | None:intergenic | 40.0% |
| !! | GGGCCAATATGTCACTTTAA+CGG | + | chr8_2:5719668-5719687 | Msa1229770:intron | 40.0% |
| CTGCCGTTAAAGTGACATAT+TGG | - | chr8_2:5719674-5719693 | None:intergenic | 40.0% | |
| TTCCAGTATAGTAGGAAAGC+GGG | - | chr8_2:5719870-5719889 | None:intergenic | 40.0% | |
| ACCGAGAATTCCAGTATAGT+AGG | - | chr8_2:5719878-5719897 | None:intergenic | 40.0% | |
| TTGTTTGAGTACAGGTATGC+CGG | + | chr8_2:5719983-5720002 | Msa1229770:intron | 40.0% | |
| !! | GTTTTTGTTTCATCTGCCTC+TGG | + | chr8_2:5720062-5720081 | Msa1229770:CDS | 40.0% |
| TTGCATGGTTGCTATGTTGT+TGG | + | chr8_2:5720119-5720138 | Msa1229770:CDS | 40.0% | |
| !! | AAGTGCTGGAAGTAAAGAGA+AGG | + | chr8_2:5720142-5720161 | Msa1229770:CDS | 40.0% |
| TCAACAAGTGAGCAAAGACT+TGG | - | chr8_2:5720310-5720329 | None:intergenic | 40.0% | |
| ! | AAGTCTTTGCTCACTTGTTG+AGG | + | chr8_2:5720309-5720328 | Msa1229770:intron | 40.0% |
| CACATGTGACATTGTTGTGT+TGG | - | chr8_2:5720671-5720690 | None:intergenic | 40.0% | |
| AAGTAAATGTCGATGCCTTC+TGG | - | chr8_2:5720838-5720857 | None:intergenic | 40.0% | |
| !! | ACCTGAAGGTGTCACAAATT+TGG | + | chr8_2:5720960-5720979 | Msa1229770:CDS | 40.0% |
| ! | CATATATAAGCGGATTCGGA+TGG | + | chr8_2:5720990-5721009 | Msa1229770:CDS | 40.0% |
| AGAAGGAAAGGTTGTGTATG+TGG | + | chr8_2:5721083-5721102 | Msa1229770:CDS | 40.0% | |
| TATGTGGAAGACATAGCTGA+GGG | + | chr8_2:5721099-5721118 | Msa1229770:CDS | 40.0% | |
| ATGGATGAAGAGGTTTCCAA+AGG | - | chr8_2:5721312-5721331 | None:intergenic | 40.0% | |
| TAGTACAACTGACCACACAT+TGG | - | chr8_2:5721800-5721819 | None:intergenic | 40.0% | |
| TTGTGACACAATTCCTGAGA+TGG | + | chr8_2:5721855-5721874 | Msa1229770:intron | 40.0% | |
| TTGTGGAAGGTTGAGAGTTA+TGG | - | chr8_2:5721965-5721984 | None:intergenic | 40.0% | |
| ATAACTCTCAACCTTCCACA+AGG | + | chr8_2:5721964-5721983 | Msa1229770:intron | 40.0% | |
| TTTGAGCAGAACAACATCGT+TGG | - | chr8_2:5721992-5722011 | None:intergenic | 40.0% | |
| GTCCCACTTTCCTATTATAC+CGG | + | chr8_2:5722387-5722406 | Msa1229770:intron | 40.0% | |
| TTGTTTGAGTACAGGTATGC+CGG | + | chr8_2:5719983-5720002 | Msa1229770:intron | 40.0% | |
| GTTTATGTTTCAGCTGCATC+TGG | + | chr8_2:5722588-5722607 | Msa1229770:intron | 40.0% | |
| ! | TGTTATGTTGTTGGAAGTGC+TGG | + | chr8_2:5722654-5722673 | Msa1229770:intron | 40.0% |
| AATCCATGTCTTTGTTCGCT+TGG | + | chr8_2:5722825-5722844 | Msa1229770:intron | 40.0% | |
| TTATAATCTGGCACACTAGG+TGG | + | chr8_2:5722919-5722938 | Msa1229770:intron | 40.0% | |
| ! | TTTAAAGCTGCATTGAGGTC+TGG | - | chr8_2:5722998-5723017 | None:intergenic | 40.0% |
| TGTCAGACAGTAACATGTGT+AGG | - | chr8_2:5723125-5723144 | None:intergenic | 40.0% | |
| CAAATTAGGCACTTTCCAGA+AGG | + | chr8_2:5723320-5723339 | Msa1229770:intron | 40.0% | |
| TGTGAGATCATTCCACTTAC+AGG | - | chr8_2:5723425-5723444 | None:intergenic | 40.0% | |
| !! | ACCTGAAGGTGTCACAAATT+TGG | + | chr8_2:5720960-5720979 | Msa1229770:CDS | 40.0% |
| TTCCTTCTCTTATAAGAGGC+AGG | - | chr8_2:5723571-5723590 | None:intergenic | 40.0% | |
| GCCTCTTATAAGAGAAGGAA+AGG | + | chr8_2:5723571-5723590 | Msa1229770:intron | 40.0% | |
| AGAAGGAAAGGTTGTGTATG+TGG | + | chr8_2:5721083-5721102 | Msa1229770:CDS | 40.0% | |
| TATGTGGAAGACATAGCTGA+GGG | + | chr8_2:5721099-5721118 | Msa1229770:CDS | 40.0% | |
| !! | GCATTGATTGGCCTATATAG+TGG | + | chr8_2:5723641-5723660 | Msa1229770:intron | 40.0% |
| CAACATTGCGACCACTATAT+AGG | - | chr8_2:5723655-5723674 | None:intergenic | 40.0% | |
| CTATATAGTGGTCGCAATGT+TGG | + | chr8_2:5723653-5723672 | Msa1229770:intron | 40.0% | |
| ! | TCGCAATGTTGGTAAACAAG+TGG | + | chr8_2:5723664-5723683 | Msa1229770:intron | 40.0% |
| ! | AGCAATCTTTGGATGGCTTT+TGG | + | chr8_2:5723780-5723799 | Msa1229770:intron | 40.0% |
| CATCATTGGAACCTTGTGGA+AGG | - | chr8_2:5718578-5718597 | None:intergenic | 45.0% | |
| GATTCTCAGGTAAGGATCAC+AGG | - | chr8_2:5718628-5718647 | None:intergenic | 45.0% | |
| TCCTTACCTGAGAATCCTGA+TGG | + | chr8_2:5718632-5718651 | Msa1229770:CDS | 45.0% | |
| AAGTCCTGCAATAGTGTCCT+TGG | - | chr8_2:5718658-5718677 | None:intergenic | 45.0% | |
| AAGGACACTATTGCAGGACT+TGG | + | chr8_2:5718657-5718676 | Msa1229770:CDS | 45.0% | |
| AGCATGACATACAGAACCAG+GGG | - | chr8_2:5718691-5718710 | None:intergenic | 45.0% | |
| TTGGGTTTCAGCTTAGAGCA+AGG | + | chr8_2:5718882-5718901 | Msa1229770:intron | 45.0% | |
| TATTGCTAACCCACTTGGGT+TGG | + | chr8_2:5718939-5718958 | Msa1229770:intron | 45.0% | |
| !! | TTGGCATGTGTTGTTGGTTC+AGG | + | chr8_2:5718958-5718977 | Msa1229770:intron | 45.0% |
| !! | GTGTTGTTGGTTCAGGAATC+AGG | + | chr8_2:5718965-5718984 | Msa1229770:intron | 45.0% |
| GAGGGAATCGAAACGTTAAG+AGG | - | chr8_2:5719006-5719025 | None:intergenic | 45.0% | |
| !!! | GATTCCCTCGGTGTCAATTT+TGG | + | chr8_2:5719017-5719036 | Msa1229770:intron | 45.0% |
| TAGTCCATACAGTCTTGCTC+TGG | + | chr8_2:5719045-5719064 | Msa1229770:intron | 45.0% | |
| AAAGCCAGAGCAAGACTGTA+TGG | - | chr8_2:5719052-5719071 | None:intergenic | 45.0% | |
| CACCCATTATGATGAGTCGT+AGG | + | chr8_2:5719393-5719412 | Msa1229770:intron | 45.0% | |
| ! | TTTGATGGCACCTACAAGGA+AGG | - | chr8_2:5719551-5719570 | None:intergenic | 45.0% |
| !! | CACTTTTGATGGCACCTACA+AGG | - | chr8_2:5719555-5719574 | None:intergenic | 45.0% |
| ! | CTTGTAGGTGCCATCAAAAG+TGG | + | chr8_2:5719553-5719572 | Msa1229770:intron | 45.0% |
| GAGTAATTGCAGCCATTGAC+AGG | + | chr8_2:5719706-5719725 | Msa1229770:intron | 45.0% | |
| TTGCAGCCATTGACAGGATT+AGG | + | chr8_2:5719712-5719731 | Msa1229770:intron | 45.0% | |
| GACACTCCTAATCCTGTCAA+TGG | - | chr8_2:5719721-5719740 | None:intergenic | 45.0% | |
| TGTTTGAGTACAGGTATGCC+GGG | + | chr8_2:5719984-5720003 | Msa1229770:intron | 45.0% | |
| GAAGTAGGCTCTCCTAAGAA+AGG | + | chr8_2:5720032-5720051 | Msa1229770:CDS | 45.0% | |
| GGCCAATTTGCCAAATTGCA+TGG | + | chr8_2:5720104-5720123 | Msa1229770:CDS | 45.0% | |
| ! | TGCTATGTTGTTGGAAGTGC+TGG | + | chr8_2:5720128-5720147 | Msa1229770:CDS | 45.0% |
| GTGAGCAAAGACTTGGATAG+TGG | - | chr8_2:5720303-5720322 | None:intergenic | 45.0% | |
| !! | ACCTCGATGCAGCTTTGAAA+AGG | + | chr8_2:5720506-5720525 | Msa1229770:CDS | 45.0% |
| ! | ACCTTTTCAAAGCTGCATCG+AGG | - | chr8_2:5720510-5720529 | None:intergenic | 45.0% |
| ! | AAGGTGTTTCCAACACGTGT+TGG | + | chr8_2:5720619-5720638 | Msa1229770:intron | 45.0% |
| TGTCAGACACTAACACGTGT+CGG | - | chr8_2:5720648-5720667 | None:intergenic | 45.0% | |
| TGTGAGATCATTCCACACAC+AGG | - | chr8_2:5720925-5720944 | None:intergenic | 45.0% | |
| GCCAAATTTGTGACACCTTC+AGG | - | chr8_2:5720964-5720983 | None:intergenic | 45.0% | |
| ! | TATAAGCGGATTCGGATGGA+AGG | + | chr8_2:5720994-5721013 | Msa1229770:CDS | 45.0% |
| GTATGTGGAAGACATAGCTG+AGG | + | chr8_2:5721098-5721117 | Msa1229770:CDS | 45.0% | |
| ATAGCTGAGGGTCTTGAGAA+TGG | + | chr8_2:5721111-5721130 | Msa1229770:CDS | 45.0% | |
| !! | GCTTTGGTTGGTCTGTTTAG+TGG | + | chr8_2:5721141-5721160 | Msa1229770:CDS | 45.0% |
| AGCACTCTTTGGATGACCTT+TGG | + | chr8_2:5721293-5721312 | Msa1229770:three_prime_UTR | 45.0% | |
| TGACACAATTCCTGAGATGG+CGG | + | chr8_2:5721858-5721877 | Msa1229770:intron | 45.0% | |
| ACAACATCGTTGGAACCTTG+TGG | - | chr8_2:5721982-5722001 | None:intergenic | 45.0% | |
| GTCATCAGGAGTCTCATGTA+AGG | - | chr8_2:5722036-5722055 | None:intergenic | 45.0% | |
| TGTTTGAGTACAGGTATGCC+GGG | + | chr8_2:5719984-5720003 | Msa1229770:intron | 45.0% | |
| ! | GCGAACAAAGACATGGATTG+TGG | - | chr8_2:5722824-5722843 | None:intergenic | 45.0% |
| TCACCAAGCGAACAAAGACA+TGG | - | chr8_2:5722831-5722850 | None:intergenic | 45.0% | |
| TGCAAGTGACTGTGTTGTGA+TGG | - | chr8_2:5723148-5723167 | None:intergenic | 45.0% | |
| GCCAAATTTGTGACACCTTC+AGG | - | chr8_2:5720964-5720983 | None:intergenic | 45.0% | |
| ! | ATATAAGCGGATTCGGATCG+AGG | + | chr8_2:5723493-5723512 | Msa1229770:intron | 45.0% |
| ! | TATAAGCGGATTCGGATCGA+GGG | + | chr8_2:5723494-5723513 | Msa1229770:intron | 45.0% |
| GTCCTGCCTCTTATAAGAGA+AGG | + | chr8_2:5723566-5723585 | Msa1229770:intron | 45.0% | |
| GTATGTGGAAGACATAGCTG+AGG | + | chr8_2:5721098-5721117 | Msa1229770:CDS | 45.0% | |
| ATAGCTGAGGGTCTTGAGAA+TGG | + | chr8_2:5721111-5721130 | Msa1229770:CDS | 45.0% | |
| ! | AATGGTCCTGCTGCATTGAT+TGG | + | chr8_2:5723629-5723648 | Msa1229770:intron | 45.0% |
| TATAGGCCAATCAATGCAGC+AGG | - | chr8_2:5723638-5723657 | None:intergenic | 45.0% | |
| !!! | AAAAATACTATTTTAAATTT+TGG | + | chr8_2:5720355-5720374 | Msa1229770:intron | 5.0% |
| ! | GAGAGTTGGTTGAGTCGTGT+GGG | - | chr8_2:5718375-5718394 | None:intergenic | 50.0% |
| ! | TGAGAGTTGGTTGAGTCGTG+TGG | - | chr8_2:5718376-5718395 | None:intergenic | 50.0% |
| GCCATCAGGATTCTCAGGTA+AGG | - | chr8_2:5718636-5718655 | None:intergenic | 50.0% | |
| CAATAGTGTCCTTGGCCATC+AGG | - | chr8_2:5718650-5718669 | None:intergenic | 50.0% | |
| ATGGCCAAGGACACTATTGC+AGG | + | chr8_2:5718651-5718670 | Msa1229770:CDS | 50.0% | |
| GACACTATTGCAGGACTTGG+TGG | + | chr8_2:5718660-5718679 | Msa1229770:CDS | 50.0% | |
| CAACACATGCCAACCCAAGT+GGG | - | chr8_2:5718951-5718970 | None:intergenic | 50.0% | |
| ACAACACATGCCAACCCAAG+TGG | - | chr8_2:5718952-5718971 | None:intergenic | 50.0% | |
| !! | CTTGGGTTGGCATGTGTTGT+TGG | + | chr8_2:5718952-5718971 | Msa1229770:intron | 50.0% |
| !!! | TCCCTCGGTGTCAATTTTGG+TGG | + | chr8_2:5719020-5719039 | Msa1229770:intron | 50.0% |
| CCCACCAAAATTGACACCGA+GGG | - | chr8_2:5719024-5719043 | None:intergenic | 50.0% | |
| !!! | CCCTCGGTGTCAATTTTGGT+GGG | + | chr8_2:5719021-5719040 | Msa1229770:intron | 50.0% |
| GTCCCGCTTTCCTACTATAC+TGG | + | chr8_2:5719865-5719884 | Msa1229770:CDS | 50.0% | |
| CCAGCATAAGCAGTCATTCC+CGG | - | chr8_2:5720005-5720024 | None:intergenic | 50.0% | |
| AAGTTGACCAACAGCACCAG+AGG | - | chr8_2:5720081-5720100 | None:intergenic | 50.0% | |
| !! | GGTGCTGTTGGTCAACTTGT+TGG | + | chr8_2:5720083-5720102 | Msa1229770:CDS | 50.0% |
| ACAGACCAACCAAAGCTGCA+GGG | - | chr8_2:5721137-5721156 | None:intergenic | 50.0% | |
| AACAGACCAACCAAAGCTGC+AGG | - | chr8_2:5721138-5721157 | None:intergenic | 50.0% | |
| ! | CTTGTGCATGGAGCACTCTT+TGG | + | chr8_2:5721282-5721301 | Msa1229770:three_prime_UTR | 50.0% |
| CATCGTTGGAACCTTGTGGA+AGG | - | chr8_2:5721978-5721997 | None:intergenic | 50.0% | |
| CATGAGACTCCTGATGACCA+AGG | + | chr8_2:5722038-5722057 | Msa1229770:intron | 50.0% | |
| CAGTAGTGTCCTTGGTCATC+AGG | - | chr8_2:5722050-5722069 | None:intergenic | 50.0% | |
| ATGACCAAGGACACTACTGC+AGG | + | chr8_2:5722051-5722070 | Msa1229770:intron | 50.0% | |
| AAGTCCTGCAGTAGTGTCCT+TGG | - | chr8_2:5722058-5722077 | None:intergenic | 50.0% | |
| AAGGACACTACTGCAGGACT+TGG | + | chr8_2:5722057-5722076 | Msa1229770:intron | 50.0% | |
| AGCATGGCATACAGAACCAG+GGG | - | chr8_2:5722091-5722110 | None:intergenic | 50.0% | |
| GAGCATGGCATACAGAACCA+GGG | - | chr8_2:5722092-5722111 | None:intergenic | 50.0% | |
| AGAGCATGGCATACAGAACC+AGG | - | chr8_2:5722093-5722112 | None:intergenic | 50.0% | |
| GAGTAATTGCAGCCACTGAC+AGG | + | chr8_2:5722231-5722250 | Msa1229770:intron | 50.0% | |
| ! | TTGCAGCCACTGACAGGTTT+TGG | + | chr8_2:5722237-5722256 | Msa1229770:intron | 50.0% |
| GACACTCCAAAACCTGTCAG+TGG | - | chr8_2:5722246-5722265 | None:intergenic | 50.0% | |
| CCAGCATATGCAGTCATTCC+CGG | - | chr8_2:5722531-5722550 | None:intergenic | 50.0% | |
| !! | GGTGCTGTTGGTCAACTTGT+TGG | + | chr8_2:5720083-5720102 | Msa1229770:CDS | 50.0% |
| CACTTACAGGTATACGGCCA+TGG | - | chr8_2:5723412-5723431 | None:intergenic | 50.0% | |
| CATGGCCGTATACCTGTAAG+TGG | + | chr8_2:5723410-5723429 | Msa1229770:intron | 50.0% | |
| CCTTGGCCATCAGGATTCTC+AGG | - | chr8_2:5718641-5718660 | None:intergenic | 55.0% | |
| CCTGAGAATCCTGATGGCCA+AGG | + | chr8_2:5718638-5718657 | Msa1229770:CDS | 55.0% | |
| GCCCACCAAAATTGACACCG+AGG | - | chr8_2:5719025-5719044 | None:intergenic | 55.0% | |
| TTAAACGAGCCCCCTGCAAG+TGG | + | chr8_2:5719070-5719089 | Msa1229770:intron | 55.0% | |
| AACCCCATCGTCCACTTGCA+GGG | - | chr8_2:5719084-5719103 | None:intergenic | 55.0% | |
| CCGGGAATGACTGCTTATGC+TGG | + | chr8_2:5720002-5720021 | Msa1229770:CDS | 55.0% | |
| !! | TCATCTGCCTCTGGTGCTGT+TGG | + | chr8_2:5720071-5720090 | Msa1229770:CDS | 55.0% |
| TGTCGGACACCAACACGTGT+TGG | - | chr8_2:5720631-5720650 | None:intergenic | 55.0% | |
| TGAGAATGGCCCTGCAGCTT+TGG | + | chr8_2:5721125-5721144 | Msa1229770:CDS | 55.0% | |
| ! | AATGGCCCTGCAGCTTTGGT+TGG | + | chr8_2:5721129-5721148 | Msa1229770:CDS | 55.0% |
| !! | TTCCTGAGATGGCGGAAGTG+AGG | + | chr8_2:5721866-5721885 | Msa1229770:intron | 55.0% |
| TTCCTCACTTCCGCCATCTC+AGG | - | chr8_2:5721871-5721890 | None:intergenic | 55.0% | |
| CCGGGAATGACTGCATATGC+TGG | + | chr8_2:5722528-5722547 | Msa1229770:intron | 55.0% | |
| !! | TCAGCTGCATCTGGTGCTGT+TGG | + | chr8_2:5722597-5722616 | Msa1229770:intron | 55.0% |
| ACCCCATCGTCCACTTGCAG+GGG | - | chr8_2:5719083-5719102 | None:intergenic | 60.0% | |
| CAACCCCATCGTCCACTTGC+AGG | - | chr8_2:5719085-5719104 | None:intergenic | 60.0% | |
| CTGCAAGTGGACGATGGGGT+TGG | + | chr8_2:5719083-5719102 | Msa1229770:intron | 60.0% | |
| CACACACAGGTATGCGCCCA+TGG | - | chr8_2:5720912-5720931 | None:intergenic | 60.0% | |
| CATGGGCGCATACCTGTGTG+TGG | + | chr8_2:5720910-5720929 | Msa1229770:CDS | 60.0% | |
| !! | GGACTTGGTGGTCTCACCCC+TGG | + | chr8_2:5718672-5718691 | Msa1229770:CDS | 65.0% |
| AGCCCCCTGCAAGTGGACGA+TGG | + | chr8_2:5719077-5719096 | Msa1229770:intron | 65.0% | |
| GCCCCCTGCAAGTGGACGAT+GGG | + | chr8_2:5719078-5719097 | Msa1229770:intron | 65.0% | |
| CCCCATCGTCCACTTGCAGG+GGG | - | chr8_2:5719082-5719101 | None:intergenic | 65.0% | |
| CCCCCTGCAAGTGGACGATG+GGG | + | chr8_2:5719079-5719098 | Msa1229770:intron | 65.0% | |
| !! | GGACTTGGTGCTCTCACCCC+TGG | + | chr8_2:5722072-5722091 | Msa1229770:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 5718357 | 5723933 | 5718357 | ID=Msa1229770;Name=Msa1229770 |
| chr8_2 | mRNA | 5718357 | 5723933 | 5718357 | ID=Msa1229770-mRNA-1;Parent=Msa1229770;Name=Msa1229770-mRNA-1;_AED=0.30;_eAED=0.30;_QI=117|1|1|1|0.8|0.66|6|240|343 |
| chr8_2 | exon | 5718357 | 5718698 | 5718357 | ID=Msa1229770-mRNA-1:exon:1976;Parent=Msa1229770-mRNA-1 |
| chr8_2 | exon | 5719718 | 5719895 | 5719718 | ID=Msa1229770-mRNA-1:exon:1977;Parent=Msa1229770-mRNA-1 |
| chr8_2 | exon | 5719997 | 5720163 | 5719997 | ID=Msa1229770-mRNA-1:exon:1978;Parent=Msa1229770-mRNA-1 |
| chr8_2 | exon | 5720445 | 5720527 | 5720445 | ID=Msa1229770-mRNA-1:exon:1979;Parent=Msa1229770-mRNA-1 |
| chr8_2 | exon | 5720828 | 5721357 | 5720828 | ID=Msa1229770-mRNA-1:exon:1980;Parent=Msa1229770-mRNA-1 |
| chr8_2 | exon | 5723845 | 5723933 | 5723845 | ID=Msa1229770-mRNA-1:exon:1981;Parent=Msa1229770-mRNA-1 |
| chr8_2 | five_prime_UTR | 5718357 | 5718473 | 5718357 | ID=Msa1229770-mRNA-1:five_prime_utr;Parent=Msa1229770-mRNA-1 |
| chr8_2 | CDS | 5718474 | 5718698 | 5718474 | ID=Msa1229770-mRNA-1:cds;Parent=Msa1229770-mRNA-1 |
| chr8_2 | CDS | 5719718 | 5719895 | 5719718 | ID=Msa1229770-mRNA-1:cds;Parent=Msa1229770-mRNA-1 |
| chr8_2 | CDS | 5719997 | 5720163 | 5719997 | ID=Msa1229770-mRNA-1:cds;Parent=Msa1229770-mRNA-1 |
| chr8_2 | CDS | 5720445 | 5720527 | 5720445 | ID=Msa1229770-mRNA-1:cds;Parent=Msa1229770-mRNA-1 |
| chr8_2 | CDS | 5720828 | 5721206 | 5720828 | ID=Msa1229770-mRNA-1:cds;Parent=Msa1229770-mRNA-1 |
| chr8_2 | three_prime_UTR | 5721207 | 5721357 | 5721207 | ID=Msa1229770-mRNA-1:three_prime_utr;Parent=Msa1229770-mRNA-1 |
| chr8_2 | three_prime_UTR | 5723845 | 5723933 | 5723845 | ID=Msa1229770-mRNA-1:three_prime_utr;Parent=Msa1229770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
