AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0295850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0295850 MtrunA17_Chr2g0318101 98.870 354 4 0 1 354 1 354 0.0 729
Msa0295850 MtrunA17_Chr4g0047841 53.581 377 116 14 1 352 1 343 2.60e-111 328
Msa0295850 MtrunA17_Chr7g0252971 67.172 198 46 5 9 199 2 187 2.39e-91 277
Msa0295850 MtrunA17_Chr7g0263931 63.128 179 59 1 15 193 11 182 9.98e-82 252
Msa0295850 MtrunA17_Chr3g0124761 70.482 166 38 2 14 179 6 160 4.83e-81 249
Msa0295850 MtrunA17_Chr2g0326361 49.603 252 82 6 15 228 14 258 4.99e-81 250
Msa0295850 MtrunA17_Chr5g0417791 66.272 169 46 3 15 182 3 161 2.16e-79 243
Msa0295850 MtrunA17_Chr4g0042561 60.000 190 59 4 1 190 1 173 9.63e-78 239
Msa0295850 MtrunA17_Chr2g0318081 64.162 173 49 2 12 184 13 172 2.34e-76 239
Msa0295850 MtrunA17_Chr8g0384721 67.683 164 39 3 15 176 7 158 3.36e-75 233
Msa0295850 MtrunA17_Chr8g0359921 64.740 173 50 3 12 184 11 172 4.96e-74 232
Msa0295850 MtrunA17_Chr3g0130731 67.284 162 42 3 15 176 7 157 1.74e-73 229
Msa0295850 MtrunA17_Chr6g0453131 53.614 166 74 3 14 179 14 176 7.88e-61 200
Msa0295850 MtrunA17_Chr5g0417001 52.381 168 67 2 17 179 16 175 1.81e-60 199
Msa0295850 MtrunA17_Chr8g0361731 53.086 162 74 1 17 178 16 175 3.52e-60 198
Msa0295850 MtrunA17_Chr4g0060931 36.686 338 178 9 3 333 5 313 2.61e-59 195
Msa0295850 MtrunA17_Chr6g0484441 53.488 172 65 3 12 183 2 158 8.77e-59 192
Msa0295850 MtrunA17_Chr2g0309891 50.820 183 74 5 14 194 5 173 3.20e-58 192
Msa0295850 MtrunA17_Chr7g0214071 54.545 176 64 3 1 176 1 160 4.85e-58 188
Msa0295850 MtrunA17_Chr3g0139331 50.000 172 69 2 8 177 4 160 6.93e-57 188
Msa0295850 MtrunA17_Chr2g0309331 41.441 222 112 4 9 227 4 210 8.32e-57 188
Msa0295850 MtrunA17_Chr2g0316971 54.217 166 67 2 14 179 22 178 1.32e-55 186
Msa0295850 MtrunA17_Chr6g0453451 37.333 300 141 11 11 297 16 281 2.74e-55 183
Msa0295850 MtrunA17_Chr1g0147421 51.176 170 65 3 11 177 23 177 3.13e-55 184
Msa0295850 MtrunA17_Chr6g0481091 48.889 180 77 3 15 192 6 172 3.30e-54 178
Msa0295850 MtrunA17_Chr3g0109821 53.892 167 63 3 15 179 6 160 3.67e-54 188
Msa0295850 MtrunA17_Chr5g0433781 54.491 167 61 4 15 179 6 159 8.15e-54 187
Msa0295850 MtrunA17_Chr3g0091921 52.761 163 66 3 15 177 16 167 9.82e-54 179
Msa0295850 MtrunA17_Chr1g0183741 41.322 242 106 6 15 246 10 225 1.71e-53 177
Msa0295850 MtrunA17_Chr4g0076731 50.299 167 69 2 17 183 56 208 2.66e-53 181
Msa0295850 MtrunA17_Chr4g0017921 46.561 189 76 5 15 195 8 179 3.01e-53 179
Msa0295850 MtrunA17_Chr7g0253011 49.714 175 77 4 11 183 13 178 7.43e-53 179
Msa0295850 MtrunA17_Chr6g0461661 49.102 167 76 2 14 180 17 174 2.33e-52 177
Msa0295850 MtrunA17_Chr5g0398971 48.193 166 70 3 14 176 6 158 5.65e-52 176
Msa0295850 MtrunA17_Chr5g0442771 35.125 279 163 7 17 285 20 290 7.33e-52 174
Msa0295850 MtrunA17_Chr4g0018391 46.927 179 75 5 14 187 6 169 2.22e-51 174
Msa0295850 MtrunA17_Chr5g0405211 47.399 173 73 4 10 179 3 160 2.42e-51 174
Msa0295850 MtrunA17_Chr8g0346001 45.882 170 85 3 12 178 12 177 7.33e-51 175
Msa0295850 MtrunA17_Chr8g0372121 47.619 168 70 4 15 179 6 158 2.16e-50 170
Msa0295850 MtrunA17_Chr5g0400461 49.412 170 65 5 14 176 5 160 3.08e-50 171
Msa0295850 MtrunA17_Chr7g0261411 50.000 160 65 2 15 174 10 154 6.97e-50 168
Msa0295850 MtrunA17_Chr4g0056541 43.814 194 86 6 14 200 6 183 9.40e-50 170
Msa0295850 MtrunA17_Chr2g0311651 47.305 167 77 4 17 176 24 186 1.49e-48 166
Msa0295850 MtrunA17_Chr8g0385991 48.256 172 78 4 15 186 14 174 3.56e-48 162
Msa0295850 MtrunA17_Chr4g0054791 48.193 166 72 4 14 176 5 159 3.74e-48 165
Msa0295850 MtrunA17_Chr2g0311661 46.552 174 84 4 17 184 23 193 4.37e-48 164
Msa0295850 MtrunA17_Chr2g0312321 48.485 165 71 4 12 176 8 158 5.14e-48 164
Msa0295850 MtrunA17_Chr7g0217721 46.286 175 88 3 11 181 15 187 7.87e-48 165
Msa0295850 MtrunA17_Chr1g0200561 46.784 171 72 5 15 181 19 174 2.05e-47 164
Msa0295850 MtrunA17_Chr3g0144271 55.634 142 61 2 2 142 11 151 2.23e-47 166
Msa0295850 MtrunA17_Chr4g0038751 41.538 195 95 4 5 197 6 183 4.92e-47 161
Msa0295850 MtrunA17_Chr3g0131911 51.149 174 71 6 15 185 14 176 9.99e-46 156
Msa0295850 MtrunA17_Chr1g0197351 49.102 167 76 3 14 178 41 200 1.44e-45 162
Msa0295850 MtrunA17_Chr7g0217711 53.030 132 60 1 11 142 15 144 7.47e-45 152
Msa0295850 MtrunA17_Chr5g0428991 47.590 166 72 3 15 178 25 177 1.41e-44 162
Msa0295850 MtrunA17_Chr1g0201021 48.980 147 71 2 2 146 6 150 3.58e-43 157
Msa0295850 MtrunA17_Chr3g0128151 45.181 166 76 3 15 178 22 174 1.23e-42 156
Msa0295850 MtrunA17_Chr3g0130101 45.062 162 74 5 17 176 9 157 1.27e-42 151
Msa0295850 MtrunA17_Chr8g0364791 42.188 192 91 6 13 197 4 182 1.76e-42 153
Msa0295850 MtrunA17_Chr1g0197361 40.404 198 94 6 17 204 10 193 3.18e-41 152
Msa0295850 MtrunA17_Chr8g0345671 46.626 163 67 4 14 173 10 155 4.08e-41 148
Msa0295850 MtrunA17_Chr3g0092671 33.117 308 168 12 17 304 7 296 5.32e-41 150
Msa0295850 MtrunA17_Chr3g0128111 42.331 163 79 3 18 178 45 194 4.27e-40 142
Msa0295850 MtrunA17_Chr8g0384201 41.146 192 93 6 13 197 4 182 8.15e-40 147
Msa0295850 MtrunA17_Chr4g0050701 41.975 162 81 2 15 176 11 159 1.28e-38 136
Msa0295850 MtrunA17_Chr8g0345691 39.877 163 78 4 14 173 11 156 5.87e-34 129
Msa0295850 MtrunA17_Chr4g0026141 40.314 191 88 8 15 192 5 182 9.74e-34 125
Msa0295850 MtrunA17_Chr8g0345711 46.512 129 65 3 15 140 12 139 4.05e-33 121
Msa0295850 MtrunA17_Chr2g0321741 49.533 107 51 2 44 149 21 125 5.85e-33 125
Msa0295850 MtrunA17_Chr8g0345731 45.113 133 64 4 15 140 24 154 1.13e-31 117
Msa0295850 MtrunA17_Chr3g0113001 45.902 122 56 2 60 181 10 121 1.64e-31 120
Msa0295850 MtrunA17_Chr2g0321631 39.674 184 84 8 16 185 5 175 1.48e-30 116
Msa0295850 MtrunA17_Chr7g0266701 37.143 175 97 5 14 182 3 170 1.92e-30 116
Msa0295850 MtrunA17_Chr8g0345721 38.068 176 69 6 4 140 17 191 5.31e-30 114
Msa0295850 MtrunA17_Chr8g0384351 40.123 162 64 5 15 176 10 138 1.15e-28 109
Msa0295850 MtrunA17_Chr8g0345701 41.060 151 68 6 14 146 6 153 1.95e-26 103
Msa0295850 MtrunA17_Chr8g0345741 41.322 121 67 3 26 143 2 121 7.51e-26 101
Msa0295850 MtrunA17_Chr3g0130321 36.585 164 91 6 15 175 7 160 3.54e-25 101
Msa0295850 MtrunA17_Chr7g0243371 54.321 81 37 0 68 148 17 97 1.04e-24 97.1
Msa0295850 MtrunA17_Chr3g0113031 44.231 104 49 2 78 181 3 97 9.15e-23 96.3
Msa0295850 MtrunA17_Chr7g0251661 33.088 136 85 4 7 140 2 133 7.37e-20 85.5
Msa0295850 MtrunA17_Chr7g0251671 32.143 140 87 5 7 143 2 136 5.54e-18 80.5
Msa0295850 MtrunA17_Chr7g0251651 34.375 128 78 4 15 140 18 141 5.08e-17 78.6
Msa0295850 MtrunA17_Chr7g0274971 29.651 172 95 7 21 182 11 166 1.62e-12 66.2
Msa0295850 MtrunA17_Chr8g0367761 29.012 162 96 5 1 146 54 212 2.04e-12 66.6
Msa0295850 MtrunA17_Chr4g0046431 29.012 162 96 5 1 146 54 212 3.65e-12 66.6
Msa0295850 MtrunA17_Chr1g0198751 33.544 158 80 9 5 143 47 198 1.06e-11 65.9
Msa0295850 MtrunA17_Chr8g0389661 31.613 155 80 7 15 146 47 198 1.20e-11 65.9
Msa0295850 MtrunA17_Chr1g0194791 57.447 47 17 2 17 61 48 93 1.32e-11 60.8
Msa0295850 MtrunA17_Chr4g0040541 32.895 152 80 7 13 146 46 193 1.61e-11 64.3
Msa0295850 MtrunA17_Chr2g0324961 29.560 159 92 6 1 142 34 189 5.37e-11 62.8
Msa0295850 MtrunA17_Chr3g0113011 48.148 54 28 0 10 63 14 67 5.59e-11 58.2
Msa0295850 MtrunA17_Chr5g0422431 34.899 149 73 9 13 143 56 198 8.50e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0295850 AT3G15510.1 53.743 374 140 11 1 353 1 362 3.69e-118 346
Msa0295850 AT1G61110.1 47.658 363 130 8 5 353 6 322 2.50e-100 299
Msa0295850 AT1G52880.1 49.459 370 119 11 1 353 1 319 4.85e-95 286
Msa0295850 AT3G04070.1 65.574 183 48 3 15 182 10 192 6.97e-84 259
Msa0295850 AT3G04070.2 67.442 172 49 2 14 182 9 176 6.21e-82 253
Msa0295850 AT1G69490.1 60.963 187 62 3 10 196 4 179 1.01e-80 247
Msa0295850 AT1G01720.1 69.822 169 40 3 14 181 6 164 4.91e-79 244
Msa0295850 AT1G77450.1 53.306 242 88 6 14 242 9 238 1.25e-78 241
Msa0295850 AT5G63790.1 66.867 166 46 2 14 179 49 205 1.46e-75 236
Msa0295850 AT5G63790.2 66.867 166 46 2 14 179 59 215 2.00e-75 236
Msa0295850 AT5G08790.1 66.867 166 46 3 14 179 6 162 2.09e-75 234
Msa0295850 AT1G52890.1 62.500 184 53 4 1 184 3 170 2.73e-75 235
Msa0295850 AT3G15500.1 65.476 168 45 3 12 179 11 165 5.87e-74 232
Msa0295850 AT4G27410.2 60.109 183 56 4 12 190 11 180 7.91e-74 231
Msa0295850 AT4G27410.3 54.000 200 58 4 12 190 11 197 1.07e-69 221
Msa0295850 AT5G39820.1 51.744 172 73 2 17 178 22 193 3.04e-60 197
Msa0295850 AT5G13180.1 58.642 162 52 2 15 176 14 160 8.76e-59 191
Msa0295850 AT3G18400.1 52.353 170 67 3 12 181 2 157 1.37e-58 192
Msa0295850 AT1G76420.1 53.988 163 63 2 15 177 22 172 3.53e-58 192
Msa0295850 AT1G26870.1 51.515 165 78 1 15 179 16 178 2.78e-57 192
Msa0295850 AT5G39610.1 53.012 166 67 3 11 176 16 170 9.58e-57 186
Msa0295850 AT5G18270.2 45.413 218 96 6 9 213 15 222 1.29e-56 187
Msa0295850 AT5G61430.1 53.892 167 66 3 11 177 12 167 2.43e-56 187
Msa0295850 AT2G24430.2 52.353 170 63 2 11 177 12 166 2.62e-56 186
Msa0295850 AT2G24430.1 52.353 170 63 2 11 177 12 166 2.62e-56 186
Msa0295850 AT5G07680.1 53.846 169 63 4 11 177 13 168 5.26e-56 186
Msa0295850 AT5G18270.1 44.954 218 97 6 9 213 15 222 6.65e-56 186
Msa0295850 AT1G79580.3 48.925 186 75 4 1 181 1 171 2.02e-55 186
Msa0295850 AT1G79580.5 48.925 186 75 4 1 181 1 171 2.02e-55 186
Msa0295850 AT1G79580.4 48.925 186 75 4 1 181 1 171 2.02e-55 186
Msa0295850 AT1G79580.2 48.925 186 75 4 1 181 1 171 2.02e-55 186
Msa0295850 AT1G79580.1 48.925 186 75 4 1 181 1 171 2.02e-55 186
Msa0295850 AT5G07680.2 54.217 166 61 4 14 177 2 154 2.33e-55 184
Msa0295850 AT3G04060.1 48.259 201 86 6 14 206 19 209 3.31e-55 184
Msa0295850 AT3G29035.1 60.150 133 51 1 10 142 19 149 5.41e-55 183
Msa0295850 AT3G03200.1 50.000 176 74 3 15 188 6 169 6.54e-55 187
Msa0295850 AT2G33480.2 50.543 184 67 5 1 180 1 164 3.59e-54 179
Msa0295850 AT5G53950.1 50.000 170 76 1 9 178 11 171 6.35e-54 182
Msa0295850 AT3G15170.1 51.515 165 71 2 15 179 20 175 2.03e-53 179
Msa0295850 AT2G33480.1 50.543 184 69 6 1 180 1 166 2.45e-53 177
Msa0295850 AT3G17730.1 50.847 177 71 6 15 189 6 168 3.25e-53 176
Msa0295850 AT5G17260.1 51.515 165 66 3 14 176 5 157 3.97e-53 182
Msa0295850 AT1G65910.1 51.515 165 65 5 15 177 6 157 4.52e-53 185
Msa0295850 AT2G02450.1 48.503 167 72 2 17 183 53 205 4.15e-52 177
Msa0295850 AT2G02450.2 48.503 167 72 2 17 183 53 205 4.51e-52 178
Msa0295850 AT3G12977.1 45.810 179 82 4 1 176 1 167 6.00e-52 174
Msa0295850 AT1G33280.1 48.824 170 68 4 15 181 8 161 1.11e-51 174
Msa0295850 AT4G36160.2 47.486 179 71 5 1 176 5 163 1.13e-51 176
Msa0295850 AT4G36160.1 47.486 179 71 5 1 176 1 159 1.14e-51 176
Msa0295850 AT4G36160.3 47.486 179 71 5 1 176 1 159 1.14e-51 176
Msa0295850 AT1G56010.2 37.943 282 147 8 2 266 6 276 1.67e-51 174
Msa0295850 AT2G43000.1 45.833 168 79 2 17 184 20 175 2.61e-51 172
Msa0295850 AT4G10350.1 49.405 168 67 4 15 178 9 162 3.56e-51 174
Msa0295850 AT2G18060.3 47.929 169 70 4 14 179 8 161 4.36e-51 174
Msa0295850 AT2G18060.1 47.929 169 70 4 14 179 8 161 4.36e-51 174
Msa0295850 AT2G46770.1 43.316 187 99 3 1 182 2 186 5.80e-51 174
Msa0295850 AT5G62380.2 49.704 169 67 4 14 179 6 159 1.39e-50 172
Msa0295850 AT5G62380.1 49.704 169 67 4 14 179 6 159 1.39e-50 172
Msa0295850 AT1G62700.1 42.786 201 88 5 14 202 6 191 1.97e-50 173
Msa0295850 AT1G62700.2 42.786 201 88 5 14 202 6 191 1.97e-50 173
Msa0295850 AT5G46590.1 49.390 164 70 4 15 176 6 158 4.45e-50 169
Msa0295850 AT3G10480.2 44.286 210 95 5 3 205 15 209 6.82e-50 173
Msa0295850 AT1G12260.2 46.988 166 70 4 14 176 6 156 9.08e-50 170
Msa0295850 AT5G46590.2 55.639 133 56 2 15 145 6 137 9.17e-50 168
Msa0295850 AT5G66300.1 47.337 169 72 3 14 179 11 165 9.99e-50 168
Msa0295850 AT1G12260.1 46.988 166 70 4 14 176 6 156 1.12e-49 171
Msa0295850 AT3G10480.1 44.286 210 96 5 3 205 15 210 1.61e-49 172
Msa0295850 AT4G17980.1 48.171 164 74 2 15 176 6 160 2.12e-49 167
Msa0295850 AT1G71930.2 43.017 179 84 3 12 187 6 169 2.49e-49 168
Msa0295850 AT1G71930.1 43.017 179 84 3 12 187 6 169 2.49e-49 168
Msa0295850 AT4G17980.2 48.171 164 74 2 15 176 6 160 2.69e-49 167
Msa0295850 AT3G10490.1 42.857 210 99 5 3 205 15 210 8.14e-49 164
Msa0295850 AT1G32770.1 43.931 173 91 3 12 181 13 182 1.70e-48 167
Msa0295850 AT3G61910.1 42.135 178 96 3 12 184 8 183 2.16e-48 166
Msa0295850 AT3G10500.1 48.810 168 71 4 14 179 8 162 9.25e-48 169
Msa0295850 AT1G54330.1 49.697 165 65 4 14 176 5 153 2.09e-47 162
Msa0295850 AT4G28530.1 47.191 178 63 3 15 176 10 172 3.22e-47 164
Msa0295850 AT5G04410.1 48.810 168 71 4 14 179 8 162 3.23e-47 168
Msa0295850 AT1G32510.1 47.126 174 72 5 15 180 6 167 6.46e-47 161
Msa0295850 AT3G10490.2 42.857 210 99 5 3 205 15 210 7.06e-47 165
Msa0295850 AT1G33060.2 48.171 164 70 3 15 176 24 174 1.05e-46 168
Msa0295850 AT1G33060.1 48.171 164 70 3 15 176 24 174 1.14e-46 168
Msa0295850 AT2G17040.1 45.122 164 73 3 17 179 8 155 1.15e-45 157
Msa0295850 AT3G10480.3 39.095 243 94 6 3 205 15 243 3.93e-45 162
Msa0295850 AT1G34180.3 47.853 163 70 4 17 177 18 167 6.24e-45 160
Msa0295850 AT1G34180.1 47.853 163 70 4 17 177 18 167 3.47e-44 160
Msa0295850 AT3G12910.1 47.368 171 81 5 17 181 23 190 6.81e-44 154
Msa0295850 AT4G35580.1 41.584 202 92 4 14 202 8 196 7.41e-44 158
Msa0295850 AT4G35580.2 45.455 176 81 3 14 187 8 170 8.25e-44 159
Msa0295850 AT4G35580.3 45.455 176 81 3 14 187 8 170 8.39e-44 159
Msa0295850 AT1G34190.1 46.626 163 72 4 17 177 18 167 9.31e-44 159
Msa0295850 AT5G24590.2 43.478 184 86 5 14 193 12 181 1.97e-43 156
Msa0295850 AT3G49530.2 43.636 165 79 3 14 176 12 164 3.17e-43 154
Msa0295850 AT3G49530.1 43.636 165 79 3 14 176 12 164 4.12e-43 155
Msa0295850 AT1G34180.4 44.571 175 70 4 17 177 18 179 1.22e-42 154
Msa0295850 AT5G64060.1 46.061 165 74 4 14 176 5 156 2.05e-42 151
Msa0295850 AT1G34180.2 44.571 175 70 4 17 177 18 179 6.62e-42 154
Msa0295850 AT5G09330.5 46.341 164 73 3 15 176 6 156 1.13e-41 152
Msa0295850 AT5G09330.2 46.341 164 73 3 15 176 6 156 1.13e-41 152
Msa0295850 AT5G09330.4 46.341 164 73 3 15 176 6 156 1.13e-41 152
Msa0295850 AT5G09330.3 46.341 164 73 3 15 176 6 156 1.13e-41 152
Msa0295850 AT5G09330.1 46.341 164 73 3 15 176 6 156 1.13e-41 152
Msa0295850 AT2G27300.1 41.753 194 85 6 15 207 14 180 1.98e-41 148
Msa0295850 AT1G32870.2 49.701 167 69 5 15 179 10 163 4.08e-39 145
Msa0295850 AT1G32870.1 49.701 167 69 5 15 179 10 163 6.13e-39 145
Msa0295850 AT1G32870.3 49.701 167 69 5 15 179 46 199 9.10e-39 145
Msa0295850 AT3G44290.2 38.418 177 88 4 17 192 16 172 3.17e-38 136
Msa0295850 AT5G64530.1 42.169 166 81 3 14 176 2 155 4.41e-38 135
Msa0295850 AT3G44290.1 39.412 170 82 4 17 185 16 165 9.58e-38 138
Msa0295850 AT5G22290.1 36.702 188 92 6 3 183 9 176 1.57e-37 138
Msa0295850 AT5G64530.2 48.092 131 56 2 14 144 2 120 1.73e-36 130
Msa0295850 AT5G04395.1 40.764 157 79 2 3 145 16 172 4.83e-36 129
Msa0295850 AT1G56010.1 36.986 219 111 7 64 266 2 209 1.62e-32 122
Msa0295850 AT5G61430.2 51.754 114 44 3 64 177 2 104 7.35e-32 121
Msa0295850 AT3G12977.2 47.788 113 47 3 64 176 14 114 1.19e-30 116
Msa0295850 AT4G10350.2 49.107 112 42 3 68 178 18 115 1.16e-29 115
Msa0295850 AT3G04420.2 43.411 129 67 3 16 140 4 130 4.84e-29 114
Msa0295850 AT3G44350.2 37.500 176 90 6 14 182 4 166 7.34e-29 112
Msa0295850 AT2G33480.3 50.427 117 39 5 68 180 8 109 9.84e-29 111
Msa0295850 AT3G04420.1 43.411 129 67 3 16 140 4 130 1.07e-28 114
Msa0295850 AT4G28530.2 50.000 108 38 1 15 106 10 117 3.67e-28 112
Msa0295850 AT5G22380.1 36.842 171 92 5 18 182 8 168 8.52e-28 109
Msa0295850 AT1G02230.1 41.007 139 74 4 16 149 4 139 1.82e-27 111
Msa0295850 AT4G01550.1 34.356 163 87 5 18 176 7 153 2.21e-26 109
Msa0295850 AT3G44350.1 40.288 139 73 4 14 145 4 139 2.22e-26 103
Msa0295850 AT1G02250.1 29.740 269 156 9 16 274 4 249 9.00e-26 106
Msa0295850 AT4G01520.1 39.850 133 75 4 16 143 5 137 2.44e-23 99.0
Msa0295850 AT4G01540.3 40.458 131 73 4 18 143 7 137 6.79e-23 99.4
Msa0295850 AT5G14000.2 37.879 132 76 3 14 143 14 141 1.09e-22 93.2
Msa0295850 AT4G01540.1 40.458 131 73 4 18 143 7 137 1.26e-22 99.0
Msa0295850 AT4G01540.4 40.458 131 73 4 18 143 7 137 1.33e-22 98.2
Msa0295850 AT1G02220.1 39.535 129 69 4 16 140 4 127 1.36e-22 98.2
Msa0295850 AT4G01540.2 40.458 131 73 4 18 143 7 137 1.54e-22 98.2
Msa0295850 AT5G14000.1 37.879 132 76 3 14 143 14 141 3.40e-22 93.6
Msa0295850 AT2G43000.2 42.593 108 50 2 77 184 2 97 5.15e-22 92.8
Msa0295850 AT1G01010.1 38.806 134 68 5 18 140 6 136 5.80e-20 90.9
Msa0295850 AT5G50820.1 36.029 136 75 5 14 146 16 142 1.46e-17 80.5
Msa0295850 AT3G56530.1 32.164 171 98 5 7 174 44 199 3.01e-17 82.0
Msa0295850 AT3G10490.4 41.304 92 42 2 88 179 2 81 1.94e-16 79.7
Msa0295850 AT3G10490.3 41.304 92 42 2 88 179 2 81 1.94e-16 79.7
Msa0295850 AT2G18060.2 43.678 87 34 3 93 179 2 73 1.14e-15 76.6
Msa0295850 AT3G55210.1 32.184 174 87 7 15 174 11 167 5.89e-15 74.7
Msa0295850 AT5G56620.3 33.333 159 76 6 15 146 43 198 1.69e-14 74.7
Msa0295850 AT5G56620.2 33.333 159 76 6 15 146 43 198 2.06e-14 74.3
Msa0295850 AT5G56620.1 33.333 159 76 6 15 146 43 198 3.16e-14 73.6
Msa0295850 AT1G28470.1 32.432 148 79 7 13 143 75 218 5.88e-13 69.3
Msa0295850 AT1G25580.1 33.333 144 77 6 13 143 56 193 1.79e-12 68.6
Msa0295850 AT5G14490.1 26.374 273 147 13 13 256 56 303 2.26e-12 67.8
Msa0295850 AT5G14490.4 26.374 273 147 13 13 256 53 300 2.44e-12 67.8
Msa0295850 AT5G14490.3 32.450 151 76 7 13 143 56 200 3.88e-12 67.0
Msa0295850 AT4G29230.1 32.051 156 79 7 15 146 48 200 4.48e-12 67.4
Msa0295850 AT4G29230.2 32.051 156 79 7 15 146 47 199 4.72e-12 67.4
Msa0295850 AT5G14490.2 32.450 151 76 7 13 143 53 197 6.06e-12 65.9
Msa0295850 AT3G04430.1 34.586 133 73 5 21 141 6 136 7.93e-12 64.3
Msa0295850 AT4G29230.3 32.051 156 79 7 15 146 48 200 9.75e-12 66.2
Msa0295850 AT4G28500.1 33.108 148 79 6 13 143 57 201 5.00e-11 63.5

Find 108 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTCTCTTCTCTTTATAAT+TGG 0.137711 2_3:-48657270 Msa0295850:CDS
AAAGAAGGGTATTGAGATTT+TGG 0.185111 2_3:-48656945 Msa0295850:three_prime_UTR
TCATTCCTTCTAATAAATTT+TGG 0.209197 2_3:+48657398 None:intergenic
GGGCTGCAACTTCTGGTTAT+TGG 0.227988 2_3:-48658012 Msa0295850:CDS
ATGAATAACAACAATAATTT+AGG 0.242375 2_3:-48657373 Msa0295850:CDS
AAGAGAAGAGAGTGTTCTTT+TGG 0.244314 2_3:+48657279 None:intergenic
ATCTAACAAAAGGTTTAGTT+TGG 0.274253 2_3:-48657209 Msa0295850:CDS
TTGGTTGTTAATTAGGAATT+TGG 0.287872 2_3:-48656926 Msa0295850:three_prime_UTR
TTCATCCCTTGAATTTGATA+TGG 0.291612 2_3:+48657067 None:intergenic
CCAAACAGGGCTGCAACTTC+TGG 0.303061 2_3:-48658019 Msa0295850:CDS
AATGACCAAAATTTATTAGA+AGG 0.304217 2_3:-48657403 Msa0295850:CDS
ATCAAATTCAAGGGATGAAT+TGG 0.314410 2_3:-48657063 Msa0295850:CDS
CAACCAGGAGGCCTATTATT+AGG 0.329457 2_3:+48657839 None:intergenic
TAACTACAACAATGCATTGT+TGG 0.355331 2_3:-48657428 Msa0295850:CDS
CGGAATCCAGGCGGGAGATT+CGG 0.368393 2_3:+48658519 None:intergenic
TTTGAAGATGTTGTCATAGT+TGG 0.369870 2_3:+48657316 None:intergenic
GGTCACCAGTGGAACATGAT+AGG 0.370388 2_3:-48657555 Msa0295850:CDS
CGAATGGAGCTAGGCCAAAC+AGG 0.379899 2_3:-48658033 Msa0295850:CDS
CTGATAATAAGCCTAATAAT+AGG 0.380441 2_3:-48657850 Msa0295850:CDS
GAGAGTTTAGTGTAAGGTTA+TGG 0.382580 2_3:+48656993 None:intergenic
GTTGATGCAATGAAGATGTT+TGG 0.384568 2_3:+48657113 None:intergenic
TTGATGCAATGAAGATGTTT+GGG 0.386161 2_3:+48657114 None:intergenic
CCAGAAGTTGCAGCCCTGTT+TGG 0.389855 2_3:+48658019 None:intergenic
ACCTTGAAGCAGCACTCATT+TGG 0.405462 2_3:+48657479 None:intergenic
TATATTTGTAGCTTGATGAT+TGG 0.405658 2_3:-48657615 Msa0295850:intron
TTCGGATACTTCCTGTCCCT+TGG 0.410697 2_3:+48658052 None:intergenic
CTTCATCTGTAGGGTGAAAT+CGG 0.420047 2_3:+48658499 None:intergenic
ATATTTGTAGCTTGATGATT+GGG 0.422988 2_3:-48657614 Msa0295850:intron
ATGGTACCACTAAATCTTGA+TGG 0.425226 2_3:+48657012 None:intergenic
GCATGCTGCAACTGCTTCCA+TGG 0.426579 2_3:+48656849 None:intergenic
ATCTCTACAAATTTGATCCA+TGG 0.432194 2_3:-48658404 Msa0295850:CDS
GCCAAATGAGTGCTGCTTCA+AGG 0.436617 2_3:-48657480 Msa0295850:CDS
GTACTTCATCATCTAACAAA+AGG 0.449336 2_3:-48657219 Msa0295850:CDS
ATTTGGCCCACGTTGATTGA+TGG 0.453048 2_3:+48657496 None:intergenic
TCTGGTTATTGGAAGGCAAC+TGG 0.454372 2_3:-48658001 Msa0295850:CDS
GATTCAATGGATGATATGAT+TGG 0.456909 2_3:-48657529 Msa0295850:CDS
CAAGAGGTATCAAAACCAAT+TGG 0.457331 2_3:-48657895 Msa0295850:CDS
AGTTGGTGTGAAGAAAGCTT+TGG 0.457762 2_3:-48657939 Msa0295850:CDS
CTGTTTGGCCTAGCTCCATT+CGG 0.458288 2_3:+48658034 None:intergenic
GAAAGTACCGATTCATCAAC+TGG 0.458560 2_3:-48658552 Msa0295850:CDS
ATACTCATGCATGATCCAAT+TGG 0.459236 2_3:+48657880 None:intergenic
ATTGATCCCAACATTGTTTG+TGG 0.459341 2_3:+48657091 None:intergenic
TCAATACCATATCAAATTCA+AGG 0.461436 2_3:-48657073 Msa0295850:CDS
GAGATCAACTTCAGCTATGA+TGG 0.464880 2_3:+48658422 None:intergenic
TAACAACAACGAAAGAAAGT+TGG 0.467489 2_3:+48658680 None:intergenic
GTGAATCCATCAAGATTTAG+TGG 0.469454 2_3:-48657018 Msa0295850:three_prime_UTR
AACAACAACGAAAGAAAGTT+GGG 0.471719 2_3:+48658681 None:intergenic
GTCCCACCAGAAGTTAAAAC+AGG 0.472832 2_3:+48657968 None:intergenic
TGCCGACTAGATTGTAAAGA+AGG 0.473921 2_3:-48656960 Msa0295850:three_prime_UTR
TTTAGGAGGTTCAAATTCAA+AGG 0.477795 2_3:-48657356 Msa0295850:CDS
CATCAACCACAAACAATGTT+GGG 0.481234 2_3:-48657097 Msa0295850:CDS
GCTATGATGGCTACTGGTAA+AGG 0.482914 2_3:+48658435 None:intergenic
TATGGTTAATCACTAAACTT+AGG 0.484565 2_3:-48657040 Msa0295850:exon
TGATGAATCGGTACTTTCCA+TGG 0.489648 2_3:+48658557 None:intergenic
ATTGGATCATGCATGAGTAT+AGG 0.491072 2_3:-48657877 Msa0295850:CDS
TTGCGAACCAGTTGATGAAT+CGG 0.491396 2_3:+48658545 None:intergenic
ACATGATAGGGAAGATTCAA+TGG 0.491852 2_3:-48657542 Msa0295850:CDS
AAGCCTAATAATAGGCCTCC+TGG 0.492045 2_3:-48657842 Msa0295850:CDS
TAGGCCTCCTGGTTGTGACT+TGG 0.494714 2_3:-48657831 Msa0295850:CDS
AGGCCTCCTGGTTGTGACTT+GGG 0.495640 2_3:-48657830 Msa0295850:CDS
TGGAAGCAGTTGCAGCATGC+AGG 0.501706 2_3:-48656846 Msa0295850:three_prime_UTR
ATTCGAGAGAGTTTAGTGTA+AGG 0.504122 2_3:+48656987 None:intergenic
GCATCAACCACAAACAATGT+TGG 0.505479 2_3:-48657098 Msa0295850:CDS
GAAGTACCTGGTAGCTCCCA+TGG 0.514804 2_3:+48658387 None:intergenic
AAAATATACCTCTTCAACCA+TGG 0.517809 2_3:-48658574 Msa0295850:exon
TCTCTACAAATTTGATCCAT+GGG 0.518291 2_3:-48658403 Msa0295850:CDS
GCAGTTGCAGCATGCAGGTG+AGG 0.525492 2_3:-48656841 Msa0295850:three_prime_UTR
ATTTCTTTAGTCCAAGGGAC+AGG 0.525984 2_3:-48658063 Msa0295850:CDS
AATAACAACAATAATTTAGG+AGG 0.528493 2_3:-48657370 Msa0295850:CDS
TTGATGATTGGGTGTTGTGC+CGG 0.533907 2_3:-48657603 Msa0295850:CDS
GTAGGGTGAAATCGGAATCC+AGG 0.534369 2_3:+48658507 None:intergenic
ACAACAAGCTCTTCATCTGT+AGG 0.541287 2_3:+48658489 None:intergenic
CAACAACCGAATCTCCCGCC+TGG 0.542994 2_3:-48658525 Msa0295850:CDS
GTGAGGAATGATCATGAGAA+TGG 0.543694 2_3:-48657178 Msa0295850:CDS
ACTTCAGCTATGATGGCTAC+TGG 0.548165 2_3:+48658429 None:intergenic
ATTCAAGGGATGAATTGGTA+TGG 0.551889 2_3:-48657058 Msa0295850:CDS
GTGGTATTTCTTTAGTCCAA+GGG 0.552045 2_3:-48658068 Msa0295850:CDS
GCAGCATGCAGGTGAGGCCA+TGG 0.553390 2_3:-48656835 Msa0295850:three_prime_UTR
GGAAGTATCCGAATGGAGCT+AGG 0.553614 2_3:-48658042 Msa0295850:CDS
TGCAACTTCTGGTTATTGGA+AGG 0.559634 2_3:-48658008 Msa0295850:CDS
AGTGGTATTTCTTTAGTCCA+AGG 0.560338 2_3:-48658069 Msa0295850:CDS
TCTTCCCTATCATGTTCCAC+TGG 0.564067 2_3:+48657550 None:intergenic
CAACAAGCTCTTCATCTGTA+GGG 0.567380 2_3:+48658490 None:intergenic
TCAATGGATGATATGATTGG+AGG 0.574207 2_3:-48657526 Msa0295850:CDS
GGTGAAATCGGAATCCAGGC+GGG 0.576719 2_3:+48658511 None:intergenic
TTGTTACCCAAGTCACAACC+AGG 0.578434 2_3:+48657824 None:intergenic
TCAAACTTGATCTTCAGCCA+TGG 0.578456 2_3:-48656866 Msa0295850:three_prime_UTR
ACCCTTCTTTACAATCTAGT+CGG 0.580638 2_3:+48656958 None:intergenic
GTCACCAGTGGAACATGATA+GGG 0.580753 2_3:-48657554 Msa0295850:CDS
ACAAGAAAAGCAACACACAT+AGG 0.587318 2_3:-48657576 Msa0295850:CDS
CAATACCATATCAAATTCAA+GGG 0.587495 2_3:-48657072 Msa0295850:CDS
CAACGTTTGGAGAGCAAGAG+TGG 0.588251 2_3:-48658087 Msa0295850:CDS
TTTGATCCATGGGAGCTACC+AGG 0.590967 2_3:-48658393 Msa0295850:intron
GGTACTTTCCATGGTTGAAG+AGG 0.592334 2_3:+48658566 None:intergenic
GCCGACTAGATTGTAAAGAA+GGG 0.599141 2_3:-48656959 Msa0295850:three_prime_UTR
TTAGTTTGGAAAATGTTGTG+AGG 0.623242 2_3:-48657195 Msa0295850:CDS
GAAGATGTTGCAGCTCAAGT+TGG 0.634032 2_3:-48657241 Msa0295850:CDS
TGGCCCACGTTGATTGATGG+TGG 0.637936 2_3:+48657499 None:intergenic
GAATGGAGCTAGGCCAAACA+GGG 0.639627 2_3:-48658032 Msa0295850:CDS
AGGGACAGGAAGTATCCGAA+TGG 0.658693 2_3:-48658049 Msa0295850:CDS
CAACACACATAGGTCACCAG+TGG 0.671269 2_3:-48657566 Msa0295850:CDS
TGATGCAATGAAGATGTTTG+GGG 0.684869 2_3:+48657115 None:intergenic
GGGTGAAATCGGAATCCAGG+CGG 0.684894 2_3:+48658510 None:intergenic
GATGCAATGAAGATGTTTGG+GGG 0.726632 2_3:+48657116 None:intergenic
TATGGTGGGAAACCACCAAG+AGG 0.726989 2_3:-48657911 Msa0295850:CDS
GTACCACCATCAATCAACGT+GGG 0.734729 2_3:-48657502 Msa0295850:CDS
TTACCCAAGTCACAACCAGG+AGG 0.745086 2_3:+48657827 None:intergenic
AGTACCACCATCAATCAACG+TGG 0.752309 2_3:-48657503 Msa0295850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGATTATAAGTTTTTTTTTT+GGG - chr2_3:48657288-48657307 Msa0295850:CDS 10.0%
!!! TGATTATAAGTTTTTTTTTT+GGG - chr2_3:48657288-48657307 Msa0295850:CDS 10.0%
!!! GTGATTATAAGTTTTTTTTT+TGG - chr2_3:48657287-48657306 Msa0295850:CDS 15.0%
!! ATGAATAACAACAATAATTT+AGG - chr2_3:48658052-48658071 Msa0295850:CDS 15.0%
!!! ATTTTAACTAAAAATATCCA+TGG + chr2_3:48658610-48658629 None:intergenic 15.0%
!!! TTGCTTGTTTTTATTTTTAT+TGG - chr2_3:48658667-48658686 Msa0295850:five_prime_UTR 15.0%
!!! GTGATTATAAGTTTTTTTTT+TGG - chr2_3:48657287-48657306 Msa0295850:CDS 15.0%
!! ATGAATAACAACAATAATTT+AGG - chr2_3:48658052-48658071 Msa0295850:CDS 15.0%
!!! ATTTTAACTAAAAATATCCA+TGG + chr2_3:48658610-48658629 None:intergenic 15.0%
!!! TTGCTTGTTTTTATTTTTAT+TGG - chr2_3:48658667-48658686 Msa0295850:five_prime_UTR 15.0%
!!! TTTTTTTTCAAAGAAGAAGA+AGG + chr2_3:48656785-48656804 None:intergenic 20.0%
!!! TTTACTGAGATTTTTTTGAA+TGG + chr2_3:48656820-48656839 None:intergenic 20.0%
!! TTAGCTAAAAAAAACCAAAA+GGG + chr2_3:48657316-48657335 None:intergenic 20.0%
!! AATGACCAAAATTTATTAGA+AGG - chr2_3:48658022-48658041 Msa0295850:CDS 20.0%
!!! TCATTCCTTCTAATAAATTT+TGG + chr2_3:48658030-48658049 None:intergenic 20.0%
!! AATAACAACAATAATTTAGG+AGG - chr2_3:48658055-48658074 Msa0295850:CDS 20.0%
!!! TTTTTTTTCAAAGAAGAAGA+AGG + chr2_3:48656785-48656804 None:intergenic 20.0%
!!! TTTACTGAGATTTTTTTGAA+TGG + chr2_3:48656820-48656839 None:intergenic 20.0%
!! TTAGCTAAAAAAAACCAAAA+GGG + chr2_3:48657316-48657335 None:intergenic 20.0%
!! AATGACCAAAATTTATTAGA+AGG - chr2_3:48658022-48658041 Msa0295850:CDS 20.0%
!!! TCATTCCTTCTAATAAATTT+TGG + chr2_3:48658030-48658049 None:intergenic 20.0%
!! AATAACAACAATAATTTAGG+AGG - chr2_3:48658055-48658074 Msa0295850:CDS 20.0%
!!! GAGATTTTTTTGAATGGTTA+TGG + chr2_3:48656814-48656833 None:intergenic 25.0%
! GTTTGAAAATATGTAATCTC+TGG + chr2_3:48657063-48657082 None:intergenic 25.0%
! TCTATCTATCTATCTATTCT+GGG - chr2_3:48657138-48657157 Msa0295850:CDS 25.0%
! CTTAGCTAAAAAAAACCAAA+AGG + chr2_3:48657317-48657336 None:intergenic 25.0%
!!! CTTTTGGTTTTTTTTAGCTA+AGG - chr2_3:48657315-48657334 Msa0295850:CDS 25.0%
! CTGATAATAAGCCTAATAAT+AGG - chr2_3:48657575-48657594 Msa0295850:CDS 25.0%
! TAACAAGAAAAACTCTCTAA+GGG - chr2_3:48657618-48657637 Msa0295850:intron 25.0%
! AACTATGCGTGATAATAAAA+AGG + chr2_3:48657665-48657684 None:intergenic 25.0%
!! TATATTTGTAGCTTGATGAT+TGG - chr2_3:48657810-48657829 Msa0295850:CDS 25.0%
!! ATATTTGTAGCTTGATGATT+GGG - chr2_3:48657811-48657830 Msa0295850:CDS 25.0%
!! CAAGGTTTCATAATTTTTCA+AGG - chr2_3:48657963-48657982 Msa0295850:CDS 25.0%
! ATCTAACAAAAGGTTTAGTT+TGG - chr2_3:48658216-48658235 Msa0295850:intron 25.0%
! TCAATACCATATCAAATTCA+AGG - chr2_3:48658352-48658371 Msa0295850:intron 25.0%
! CAATACCATATCAAATTCAA+GGG - chr2_3:48658353-48658372 Msa0295850:intron 25.0%
! TATGGTTAATCACTAAACTT+AGG - chr2_3:48658385-48658404 Msa0295850:intron 25.0%
!!! TGAGATTTTGGTTGTTAATT+AGG - chr2_3:48658492-48658511 Msa0295850:CDS 25.0%
! TTGGTTGTTAATTAGGAATT+TGG - chr2_3:48658499-48658518 Msa0295850:CDS 25.0%
!!! GTTTTAATCAATTAGCTAGA+TGG - chr2_3:48658534-48658553 Msa0295850:CDS 25.0%
!!! GAGATTTTTTTGAATGGTTA+TGG + chr2_3:48656814-48656833 None:intergenic 25.0%
! GTTTGAAAATATGTAATCTC+TGG + chr2_3:48657063-48657082 None:intergenic 25.0%
! TCTATCTATCTATCTATTCT+GGG - chr2_3:48657138-48657157 Msa0295850:CDS 25.0%
! CTTAGCTAAAAAAAACCAAA+AGG + chr2_3:48657317-48657336 None:intergenic 25.0%
!!! CTTTTGGTTTTTTTTAGCTA+AGG - chr2_3:48657315-48657334 Msa0295850:CDS 25.0%
! CTGATAATAAGCCTAATAAT+AGG - chr2_3:48657575-48657594 Msa0295850:CDS 25.0%
! TAACAAGAAAAACTCTCTAA+GGG - chr2_3:48657618-48657637 Msa0295850:intron 25.0%
! AACTATGCGTGATAATAAAA+AGG + chr2_3:48657665-48657684 None:intergenic 25.0%
!! TATATTTGTAGCTTGATGAT+TGG - chr2_3:48657810-48657829 Msa0295850:CDS 25.0%
!! ATATTTGTAGCTTGATGATT+GGG - chr2_3:48657811-48657830 Msa0295850:CDS 25.0%
!! CAAGGTTTCATAATTTTTCA+AGG - chr2_3:48657963-48657982 Msa0295850:CDS 25.0%
! ATCTAACAAAAGGTTTAGTT+TGG - chr2_3:48658216-48658235 Msa0295850:intron 25.0%
! TCAATACCATATCAAATTCA+AGG - chr2_3:48658352-48658371 Msa0295850:intron 25.0%
! CAATACCATATCAAATTCAA+GGG - chr2_3:48658353-48658372 Msa0295850:intron 25.0%
! TATGGTTAATCACTAAACTT+AGG - chr2_3:48658385-48658404 Msa0295850:intron 25.0%
!!! TGAGATTTTGGTTGTTAATT+AGG - chr2_3:48658492-48658511 Msa0295850:CDS 25.0%
! TTGGTTGTTAATTAGGAATT+TGG - chr2_3:48658499-48658518 Msa0295850:CDS 25.0%
!!! GTTTTAATCAATTAGCTAGA+TGG - chr2_3:48658534-48658553 Msa0295850:CDS 25.0%
AACAACAACGAAAGAAAGTT+GGG + chr2_3:48656747-48656766 None:intergenic 30.0%
TAACAACAACGAAAGAAAGT+TGG + chr2_3:48656748-48656767 None:intergenic 30.0%
! TTTTTGAATGGTTATGGCTA+TGG + chr2_3:48656808-48656827 None:intergenic 30.0%
AAAATATACCTCTTCAACCA+TGG - chr2_3:48656851-48656870 Msa0295850:three_prime_UTR 30.0%
ATCTCTACAAATTTGATCCA+TGG - chr2_3:48657021-48657040 Msa0295850:three_prime_UTR 30.0%
TCTCTACAAATTTGATCCAT+GGG - chr2_3:48657022-48657041 Msa0295850:three_prime_UTR 30.0%
GTCTATCTATCTATCTATTC+TGG - chr2_3:48657137-48657156 Msa0295850:CDS 30.0%
!!! TTCGATCATTTTTTCTTGCA+CGG - chr2_3:48657208-48657227 Msa0295850:CDS 30.0%
!!! AAGAAAGCTTTGGTTTTCTA+TGG - chr2_3:48657496-48657515 Msa0295850:CDS 30.0%
GTAACAAGAAAAACTCTCTA+AGG - chr2_3:48657617-48657636 Msa0295850:intron 30.0%
CGTGATAATAAAAAGGAGTT+TGG + chr2_3:48657658-48657677 None:intergenic 30.0%
GATTCAATGGATGATATGAT+TGG - chr2_3:48657896-48657915 Msa0295850:CDS 30.0%
TAACTACAACAATGCATTGT+TGG - chr2_3:48657997-48658016 Msa0295850:CDS 30.0%
TTTAGGAGGTTCAAATTCAA+AGG - chr2_3:48658069-48658088 Msa0295850:CDS 30.0%
TTTGAAGATGTTGTCATAGT+TGG + chr2_3:48658112-48658131 None:intergenic 30.0%
CACTCTCTTCTCTTTATAAT+TGG - chr2_3:48658155-48658174 Msa0295850:intron 30.0%
GTACTTCATCATCTAACAAA+AGG - chr2_3:48658206-48658225 Msa0295850:intron 30.0%
! TTAGTTTGGAAAATGTTGTG+AGG - chr2_3:48658230-48658249 Msa0295850:intron 30.0%
TTGATGCAATGAAGATGTTT+GGG + chr2_3:48658314-48658333 None:intergenic 30.0%
TTCATCCCTTGAATTTGATA+TGG + chr2_3:48658361-48658380 None:intergenic 30.0%
ATCAAATTCAAGGGATGAAT+TGG - chr2_3:48658362-48658381 Msa0295850:intron 30.0%
!!! AAAGAAGGGTATTGAGATTT+TGG - chr2_3:48658480-48658499 Msa0295850:CDS 30.0%
AACAACAACGAAAGAAAGTT+GGG + chr2_3:48656747-48656766 None:intergenic 30.0%
TAACAACAACGAAAGAAAGT+TGG + chr2_3:48656748-48656767 None:intergenic 30.0%
! TTTTTGAATGGTTATGGCTA+TGG + chr2_3:48656808-48656827 None:intergenic 30.0%
AAAATATACCTCTTCAACCA+TGG - chr2_3:48656851-48656870 Msa0295850:three_prime_UTR 30.0%
ATCTCTACAAATTTGATCCA+TGG - chr2_3:48657021-48657040 Msa0295850:three_prime_UTR 30.0%
TCTCTACAAATTTGATCCAT+GGG - chr2_3:48657022-48657041 Msa0295850:three_prime_UTR 30.0%
GTCTATCTATCTATCTATTC+TGG - chr2_3:48657137-48657156 Msa0295850:CDS 30.0%
!!! TTCGATCATTTTTTCTTGCA+CGG - chr2_3:48657208-48657227 Msa0295850:CDS 30.0%
!!! AAGAAAGCTTTGGTTTTCTA+TGG - chr2_3:48657496-48657515 Msa0295850:CDS 30.0%
GTAACAAGAAAAACTCTCTA+AGG - chr2_3:48657617-48657636 Msa0295850:intron 30.0%
CGTGATAATAAAAAGGAGTT+TGG + chr2_3:48657658-48657677 None:intergenic 30.0%
GATTCAATGGATGATATGAT+TGG - chr2_3:48657896-48657915 Msa0295850:CDS 30.0%
TAACTACAACAATGCATTGT+TGG - chr2_3:48657997-48658016 Msa0295850:CDS 30.0%
TTTAGGAGGTTCAAATTCAA+AGG - chr2_3:48658069-48658088 Msa0295850:CDS 30.0%
TTTGAAGATGTTGTCATAGT+TGG + chr2_3:48658112-48658131 None:intergenic 30.0%
CACTCTCTTCTCTTTATAAT+TGG - chr2_3:48658155-48658174 Msa0295850:intron 30.0%
GTACTTCATCATCTAACAAA+AGG - chr2_3:48658206-48658225 Msa0295850:intron 30.0%
! TTAGTTTGGAAAATGTTGTG+AGG - chr2_3:48658230-48658249 Msa0295850:intron 30.0%
TTGATGCAATGAAGATGTTT+GGG + chr2_3:48658314-48658333 None:intergenic 30.0%
TTCATCCCTTGAATTTGATA+TGG + chr2_3:48658361-48658380 None:intergenic 30.0%
ATCAAATTCAAGGGATGAAT+TGG - chr2_3:48658362-48658381 Msa0295850:intron 30.0%
!!! AAAGAAGGGTATTGAGATTT+TGG - chr2_3:48658480-48658499 Msa0295850:CDS 30.0%
!!! TCGATCATTTTTTCTTGCAC+GGG - chr2_3:48657209-48657228 Msa0295850:CDS 35.0%
!!! TTTTTTTTTGGGCACCCTTT+TGG - chr2_3:48657299-48657318 Msa0295850:CDS 35.0%
!!! TTTTTAGCTAAGGCAACGTT+TGG - chr2_3:48657325-48657344 Msa0295850:CDS 35.0%
AGTGGTATTTCTTTAGTCCA+AGG - chr2_3:48657356-48657375 Msa0295850:CDS 35.0%
GTGGTATTTCTTTAGTCCAA+GGG - chr2_3:48657357-48657376 Msa0295850:CDS 35.0%
!!! GATAAGCCTGTTTTAACTTC+TGG - chr2_3:48657451-48657470 Msa0295850:CDS 35.0%
!!! AAAGCTTTGGTTTTCTATGG+TGG - chr2_3:48657499-48657518 Msa0295850:CDS 35.0%
!!! AAGCTTTGGTTTTCTATGGT+GGG - chr2_3:48657500-48657519 Msa0295850:CDS 35.0%
!!! CAATTGGTTTTGATACCTCT+TGG + chr2_3:48657532-48657551 None:intergenic 35.0%
!! CAAGAGGTATCAAAACCAAT+TGG - chr2_3:48657530-48657549 Msa0295850:CDS 35.0%
ATACTCATGCATGATCCAAT+TGG + chr2_3:48657548-48657567 None:intergenic 35.0%
ATTGGATCATGCATGAGTAT+AGG - chr2_3:48657548-48657567 Msa0295850:CDS 35.0%
!!! TGTTGCTTTTCTTGTAGATC+CGG + chr2_3:48657844-48657863 None:intergenic 35.0%
ACAAGAAAAGCAACACACAT+AGG - chr2_3:48657849-48657868 Msa0295850:CDS 35.0%
ACATGATAGGGAAGATTCAA+TGG - chr2_3:48657883-48657902 Msa0295850:CDS 35.0%
TCAATGGATGATATGATTGG+AGG - chr2_3:48657899-48657918 Msa0295850:CDS 35.0%
!!! AAGAGAAGAGAGTGTTCTTT+TGG + chr2_3:48658149-48658168 None:intergenic 35.0%
TGATGCAATGAAGATGTTTG+GGG + chr2_3:48658313-48658332 None:intergenic 35.0%
GTTGATGCAATGAAGATGTT+TGG + chr2_3:48658315-48658334 None:intergenic 35.0%
CATCAACCACAAACAATGTT+GGG - chr2_3:48658328-48658347 Msa0295850:intron 35.0%
ATTGATCCCAACATTGTTTG+TGG + chr2_3:48658337-48658356 None:intergenic 35.0%
ATTCAAGGGATGAATTGGTA+TGG - chr2_3:48658367-48658386 Msa0295850:intron 35.0%
GTGAATCCATCAAGATTTAG+TGG - chr2_3:48658407-48658426 Msa0295850:CDS 35.0%
ATGGTACCACTAAATCTTGA+TGG + chr2_3:48658416-48658435 None:intergenic 35.0%
GAGAGTTTAGTGTAAGGTTA+TGG + chr2_3:48658435-48658454 None:intergenic 35.0%
ATTCGAGAGAGTTTAGTGTA+AGG + chr2_3:48658441-48658460 None:intergenic 35.0%
ACCCTTCTTTACAATCTAGT+CGG + chr2_3:48658470-48658489 None:intergenic 35.0%
!!! TCGATCATTTTTTCTTGCAC+GGG - chr2_3:48657209-48657228 Msa0295850:CDS 35.0%
!!! TTTTTTTTTGGGCACCCTTT+TGG - chr2_3:48657299-48657318 Msa0295850:CDS 35.0%
!!! TTTTTAGCTAAGGCAACGTT+TGG - chr2_3:48657325-48657344 Msa0295850:CDS 35.0%
AGTGGTATTTCTTTAGTCCA+AGG - chr2_3:48657356-48657375 Msa0295850:CDS 35.0%
GTGGTATTTCTTTAGTCCAA+GGG - chr2_3:48657357-48657376 Msa0295850:CDS 35.0%
!!! GATAAGCCTGTTTTAACTTC+TGG - chr2_3:48657451-48657470 Msa0295850:CDS 35.0%
!!! AAAGCTTTGGTTTTCTATGG+TGG - chr2_3:48657499-48657518 Msa0295850:CDS 35.0%
!!! AAGCTTTGGTTTTCTATGGT+GGG - chr2_3:48657500-48657519 Msa0295850:CDS 35.0%
!!! CAATTGGTTTTGATACCTCT+TGG + chr2_3:48657532-48657551 None:intergenic 35.0%
!! CAAGAGGTATCAAAACCAAT+TGG - chr2_3:48657530-48657549 Msa0295850:CDS 35.0%
ATACTCATGCATGATCCAAT+TGG + chr2_3:48657548-48657567 None:intergenic 35.0%
ATTGGATCATGCATGAGTAT+AGG - chr2_3:48657548-48657567 Msa0295850:CDS 35.0%
!!! TGTTGCTTTTCTTGTAGATC+CGG + chr2_3:48657844-48657863 None:intergenic 35.0%
ACAAGAAAAGCAACACACAT+AGG - chr2_3:48657849-48657868 Msa0295850:CDS 35.0%
ACATGATAGGGAAGATTCAA+TGG - chr2_3:48657883-48657902 Msa0295850:CDS 35.0%
TCAATGGATGATATGATTGG+AGG - chr2_3:48657899-48657918 Msa0295850:CDS 35.0%
!!! AAGAGAAGAGAGTGTTCTTT+TGG + chr2_3:48658149-48658168 None:intergenic 35.0%
TGATGCAATGAAGATGTTTG+GGG + chr2_3:48658313-48658332 None:intergenic 35.0%
GTTGATGCAATGAAGATGTT+TGG + chr2_3:48658315-48658334 None:intergenic 35.0%
CATCAACCACAAACAATGTT+GGG - chr2_3:48658328-48658347 Msa0295850:intron 35.0%
ATTGATCCCAACATTGTTTG+TGG + chr2_3:48658337-48658356 None:intergenic 35.0%
ATTCAAGGGATGAATTGGTA+TGG - chr2_3:48658367-48658386 Msa0295850:intron 35.0%
GTGAATCCATCAAGATTTAG+TGG - chr2_3:48658407-48658426 Msa0295850:CDS 35.0%
ATGGTACCACTAAATCTTGA+TGG + chr2_3:48658416-48658435 None:intergenic 35.0%
GAGAGTTTAGTGTAAGGTTA+TGG + chr2_3:48658435-48658454 None:intergenic 35.0%
ATTCGAGAGAGTTTAGTGTA+AGG + chr2_3:48658441-48658460 None:intergenic 35.0%
ACCCTTCTTTACAATCTAGT+CGG + chr2_3:48658470-48658489 None:intergenic 35.0%
TGATGAATCGGTACTTTCCA+TGG + chr2_3:48656871-48656890 None:intergenic 40.0%
!! GAAAGTACCGATTCATCAAC+TGG - chr2_3:48656873-48656892 Msa0295850:three_prime_UTR 40.0%
!! TTGCGAACCAGTTGATGAAT+CGG + chr2_3:48656883-48656902 None:intergenic 40.0%
CTTCATCTGTAGGGTGAAAT+CGG + chr2_3:48656929-48656948 None:intergenic 40.0%
CAACAAGCTCTTCATCTGTA+GGG + chr2_3:48656938-48656957 None:intergenic 40.0%
ACAACAAGCTCTTCATCTGT+AGG + chr2_3:48656939-48656958 None:intergenic 40.0%
!!! CTGAAGCTGCTTTTTTCTTG+AGG + chr2_3:48656968-48656987 None:intergenic 40.0%
GAGATCAACTTCAGCTATGA+TGG + chr2_3:48657006-48657025 None:intergenic 40.0%
!! ATGTAATCTCTGGAAGTACC+TGG + chr2_3:48657053-48657072 None:intergenic 40.0%
ATTTCTTTAGTCCAAGGGAC+AGG - chr2_3:48657362-48657381 Msa0295850:CDS 40.0%
! TGCAACTTCTGGTTATTGGA+AGG - chr2_3:48657417-48657436 Msa0295850:CDS 40.0%
!!! AAGCCTGTTTTAACTTCTGG+TGG - chr2_3:48657454-48657473 Msa0295850:CDS 40.0%
!!! AGCCTGTTTTAACTTCTGGT+GGG - chr2_3:48657455-48657474 Msa0295850:CDS 40.0%
! AGTTGGTGTGAAGAAAGCTT+TGG - chr2_3:48657486-48657505 Msa0295850:CDS 40.0%
!!! TTGGTTTTGATACCTCTTGG+TGG + chr2_3:48657529-48657548 None:intergenic 40.0%
!!! GAAGAGAGTGTTCTTTTGGA+AGG + chr2_3:48658145-48658164 None:intergenic 40.0%
GTGAGGAATGATCATGAGAA+TGG - chr2_3:48658247-48658266 Msa0295850:intron 40.0%
GATGCAATGAAGATGTTTGG+GGG + chr2_3:48658312-48658331 None:intergenic 40.0%
GCATCAACCACAAACAATGT+TGG - chr2_3:48658327-48658346 Msa0295850:intron 40.0%
! TGCCGACTAGATTGTAAAGA+AGG - chr2_3:48658465-48658484 Msa0295850:CDS 40.0%
GCCGACTAGATTGTAAAGAA+GGG - chr2_3:48658466-48658485 Msa0295850:CDS 40.0%
TCAAACTTGATCTTCAGCCA+TGG - chr2_3:48658559-48658578 Msa0295850:exon 40.0%
TGATGAATCGGTACTTTCCA+TGG + chr2_3:48656871-48656890 None:intergenic 40.0%
!! GAAAGTACCGATTCATCAAC+TGG - chr2_3:48656873-48656892 Msa0295850:three_prime_UTR 40.0%
!! TTGCGAACCAGTTGATGAAT+CGG + chr2_3:48656883-48656902 None:intergenic 40.0%
CTTCATCTGTAGGGTGAAAT+CGG + chr2_3:48656929-48656948 None:intergenic 40.0%
CAACAAGCTCTTCATCTGTA+GGG + chr2_3:48656938-48656957 None:intergenic 40.0%
ACAACAAGCTCTTCATCTGT+AGG + chr2_3:48656939-48656958 None:intergenic 40.0%
!!! CTGAAGCTGCTTTTTTCTTG+AGG + chr2_3:48656968-48656987 None:intergenic 40.0%
GAGATCAACTTCAGCTATGA+TGG + chr2_3:48657006-48657025 None:intergenic 40.0%
!! ATGTAATCTCTGGAAGTACC+TGG + chr2_3:48657053-48657072 None:intergenic 40.0%
ATTTCTTTAGTCCAAGGGAC+AGG - chr2_3:48657362-48657381 Msa0295850:CDS 40.0%
! TGCAACTTCTGGTTATTGGA+AGG - chr2_3:48657417-48657436 Msa0295850:CDS 40.0%
!!! AAGCCTGTTTTAACTTCTGG+TGG - chr2_3:48657454-48657473 Msa0295850:CDS 40.0%
!!! AGCCTGTTTTAACTTCTGGT+GGG - chr2_3:48657455-48657474 Msa0295850:CDS 40.0%
! AGTTGGTGTGAAGAAAGCTT+TGG - chr2_3:48657486-48657505 Msa0295850:CDS 40.0%
!!! TTGGTTTTGATACCTCTTGG+TGG + chr2_3:48657529-48657548 None:intergenic 40.0%
!!! GAAGAGAGTGTTCTTTTGGA+AGG + chr2_3:48658145-48658164 None:intergenic 40.0%
GTGAGGAATGATCATGAGAA+TGG - chr2_3:48658247-48658266 Msa0295850:intron 40.0%
GATGCAATGAAGATGTTTGG+GGG + chr2_3:48658312-48658331 None:intergenic 40.0%
GCATCAACCACAAACAATGT+TGG - chr2_3:48658327-48658346 Msa0295850:intron 40.0%
! TGCCGACTAGATTGTAAAGA+AGG - chr2_3:48658465-48658484 Msa0295850:CDS 40.0%
GCCGACTAGATTGTAAAGAA+GGG - chr2_3:48658466-48658485 Msa0295850:CDS 40.0%
TCAAACTTGATCTTCAGCCA+TGG - chr2_3:48658559-48658578 Msa0295850:exon 40.0%
GGTACTTTCCATGGTTGAAG+AGG + chr2_3:48656862-48656881 None:intergenic 45.0%
GCTATGATGGCTACTGGTAA+AGG + chr2_3:48656993-48657012 None:intergenic 45.0%
ACTTCAGCTATGATGGCTAC+TGG + chr2_3:48656999-48657018 None:intergenic 45.0%
TCTGGTTATTGGAAGGCAAC+TGG - chr2_3:48657424-48657443 Msa0295850:CDS 45.0%
GTCCCACCAGAAGTTAAAAC+AGG + chr2_3:48657460-48657479 None:intergenic 45.0%
TCTGGTGGGACACAAAAAGT+TGG - chr2_3:48657469-48657488 Msa0295850:CDS 45.0%
AAGCCTAATAATAGGCCTCC+TGG - chr2_3:48657583-48657602 Msa0295850:CDS 45.0%
CAACCAGGAGGCCTATTATT+AGG + chr2_3:48657589-48657608 None:intergenic 45.0%
TTGTTACCCAAGTCACAACC+AGG + chr2_3:48657604-48657623 None:intergenic 45.0%
! TTGATGATTGGGTGTTGTGC+CGG - chr2_3:48657822-48657841 Msa0295850:CDS 45.0%
GTCACCAGTGGAACATGATA+GGG - chr2_3:48657871-48657890 Msa0295850:CDS 45.0%
TCTTCCCTATCATGTTCCAC+TGG + chr2_3:48657878-48657897 None:intergenic 45.0%
AGTACCACCATCAATCAACG+TGG - chr2_3:48657922-48657941 Msa0295850:CDS 45.0%
GTACCACCATCAATCAACGT+GGG - chr2_3:48657923-48657942 Msa0295850:CDS 45.0%
! ATTTGGCCCACGTTGATTGA+TGG + chr2_3:48657932-48657951 None:intergenic 45.0%
ACCTTGAAGCAGCACTCATT+TGG + chr2_3:48657949-48657968 None:intergenic 45.0%
GAAGATGTTGCAGCTCAAGT+TGG - chr2_3:48658184-48658203 Msa0295850:intron 45.0%
GGTACTTTCCATGGTTGAAG+AGG + chr2_3:48656862-48656881 None:intergenic 45.0%
GCTATGATGGCTACTGGTAA+AGG + chr2_3:48656993-48657012 None:intergenic 45.0%
ACTTCAGCTATGATGGCTAC+TGG + chr2_3:48656999-48657018 None:intergenic 45.0%
TCTGGTTATTGGAAGGCAAC+TGG - chr2_3:48657424-48657443 Msa0295850:CDS 45.0%
GTCCCACCAGAAGTTAAAAC+AGG + chr2_3:48657460-48657479 None:intergenic 45.0%
TCTGGTGGGACACAAAAAGT+TGG - chr2_3:48657469-48657488 Msa0295850:CDS 45.0%
AAGCCTAATAATAGGCCTCC+TGG - chr2_3:48657583-48657602 Msa0295850:CDS 45.0%
CAACCAGGAGGCCTATTATT+AGG + chr2_3:48657589-48657608 None:intergenic 45.0%
TTGTTACCCAAGTCACAACC+AGG + chr2_3:48657604-48657623 None:intergenic 45.0%
! TTGATGATTGGGTGTTGTGC+CGG - chr2_3:48657822-48657841 Msa0295850:CDS 45.0%
GTCACCAGTGGAACATGATA+GGG - chr2_3:48657871-48657890 Msa0295850:CDS 45.0%
TCTTCCCTATCATGTTCCAC+TGG + chr2_3:48657878-48657897 None:intergenic 45.0%
AGTACCACCATCAATCAACG+TGG - chr2_3:48657922-48657941 Msa0295850:CDS 45.0%
GTACCACCATCAATCAACGT+GGG - chr2_3:48657923-48657942 Msa0295850:CDS 45.0%
! ATTTGGCCCACGTTGATTGA+TGG + chr2_3:48657932-48657951 None:intergenic 45.0%
ACCTTGAAGCAGCACTCATT+TGG + chr2_3:48657949-48657968 None:intergenic 45.0%
GAAGATGTTGCAGCTCAAGT+TGG - chr2_3:48658184-48658203 Msa0295850:intron 45.0%
GTAGGGTGAAATCGGAATCC+AGG + chr2_3:48656921-48656940 None:intergenic 50.0%
TTTGATCCATGGGAGCTACC+AGG - chr2_3:48657032-48657051 Msa0295850:three_prime_UTR 50.0%
CAACGTTTGGAGAGCAAGAG+TGG - chr2_3:48657338-48657357 Msa0295850:CDS 50.0%
TTCGGATACTTCCTGTCCCT+TGG + chr2_3:48657376-48657395 None:intergenic 50.0%
!! AGGGACAGGAAGTATCCGAA+TGG - chr2_3:48657376-48657395 Msa0295850:CDS 50.0%
!! GGAAGTATCCGAATGGAGCT+AGG - chr2_3:48657383-48657402 Msa0295850:CDS 50.0%
CTGTTTGGCCTAGCTCCATT+CGG + chr2_3:48657394-48657413 None:intergenic 50.0%
GAATGGAGCTAGGCCAAACA+GGG - chr2_3:48657393-48657412 Msa0295850:CDS 50.0%
! GGGCTGCAACTTCTGGTTAT+TGG - chr2_3:48657413-48657432 Msa0295850:CDS 50.0%
! TATGGTGGGAAACCACCAAG+AGG - chr2_3:48657514-48657533 Msa0295850:CDS 50.0%
TTACCCAAGTCACAACCAGG+AGG + chr2_3:48657601-48657620 None:intergenic 50.0%
CAACACACATAGGTCACCAG+TGG - chr2_3:48657859-48657878 Msa0295850:CDS 50.0%
GGTCACCAGTGGAACATGAT+AGG - chr2_3:48657870-48657889 Msa0295850:CDS 50.0%
!! GCCAAATGAGTGCTGCTTCA+AGG - chr2_3:48657945-48657964 Msa0295850:CDS 50.0%
GTAGGGTGAAATCGGAATCC+AGG + chr2_3:48656921-48656940 None:intergenic 50.0%
TTTGATCCATGGGAGCTACC+AGG - chr2_3:48657032-48657051 Msa0295850:three_prime_UTR 50.0%
CAACGTTTGGAGAGCAAGAG+TGG - chr2_3:48657338-48657357 Msa0295850:CDS 50.0%
TTCGGATACTTCCTGTCCCT+TGG + chr2_3:48657376-48657395 None:intergenic 50.0%
!! AGGGACAGGAAGTATCCGAA+TGG - chr2_3:48657376-48657395 Msa0295850:CDS 50.0%
!! GGAAGTATCCGAATGGAGCT+AGG - chr2_3:48657383-48657402 Msa0295850:CDS 50.0%
CTGTTTGGCCTAGCTCCATT+CGG + chr2_3:48657394-48657413 None:intergenic 50.0%
GAATGGAGCTAGGCCAAACA+GGG - chr2_3:48657393-48657412 Msa0295850:CDS 50.0%
! GGGCTGCAACTTCTGGTTAT+TGG - chr2_3:48657413-48657432 Msa0295850:CDS 50.0%
! TATGGTGGGAAACCACCAAG+AGG - chr2_3:48657514-48657533 Msa0295850:CDS 50.0%
TTACCCAAGTCACAACCAGG+AGG + chr2_3:48657601-48657620 None:intergenic 50.0%
CAACACACATAGGTCACCAG+TGG - chr2_3:48657859-48657878 Msa0295850:CDS 50.0%
GGTCACCAGTGGAACATGAT+AGG - chr2_3:48657870-48657889 Msa0295850:CDS 50.0%
!! GCCAAATGAGTGCTGCTTCA+AGG - chr2_3:48657945-48657964 Msa0295850:CDS 50.0%
GGTGAAATCGGAATCCAGGC+GGG + chr2_3:48656917-48656936 None:intergenic 55.0%
GGGTGAAATCGGAATCCAGG+CGG + chr2_3:48656918-48656937 None:intergenic 55.0%
! GAAGTACCTGGTAGCTCCCA+TGG + chr2_3:48657041-48657060 None:intergenic 55.0%
CGAATGGAGCTAGGCCAAAC+AGG - chr2_3:48657392-48657411 Msa0295850:CDS 55.0%
CCAGAAGTTGCAGCCCTGTT+TGG + chr2_3:48657409-48657428 None:intergenic 55.0%
CCAAACAGGGCTGCAACTTC+TGG - chr2_3:48657406-48657425 Msa0295850:CDS 55.0%
TAGGCCTCCTGGTTGTGACT+TGG - chr2_3:48657594-48657613 Msa0295850:CDS 55.0%
AGGCCTCCTGGTTGTGACTT+GGG - chr2_3:48657595-48657614 Msa0295850:CDS 55.0%
! TGGCCCACGTTGATTGATGG+TGG + chr2_3:48657929-48657948 None:intergenic 55.0%
GCATGCTGCAACTGCTTCCA+TGG + chr2_3:48658579-48658598 None:intergenic 55.0%
TGGAAGCAGTTGCAGCATGC+AGG - chr2_3:48658579-48658598 Msa0295850:five_prime_UTR 55.0%
GGTGAAATCGGAATCCAGGC+GGG + chr2_3:48656917-48656936 None:intergenic 55.0%
GGGTGAAATCGGAATCCAGG+CGG + chr2_3:48656918-48656937 None:intergenic 55.0%
! GAAGTACCTGGTAGCTCCCA+TGG + chr2_3:48657041-48657060 None:intergenic 55.0%
CGAATGGAGCTAGGCCAAAC+AGG - chr2_3:48657392-48657411 Msa0295850:CDS 55.0%
CCAGAAGTTGCAGCCCTGTT+TGG + chr2_3:48657409-48657428 None:intergenic 55.0%
CCAAACAGGGCTGCAACTTC+TGG - chr2_3:48657406-48657425 Msa0295850:CDS 55.0%
TAGGCCTCCTGGTTGTGACT+TGG - chr2_3:48657594-48657613 Msa0295850:CDS 55.0%
AGGCCTCCTGGTTGTGACTT+GGG - chr2_3:48657595-48657614 Msa0295850:CDS 55.0%
! TGGCCCACGTTGATTGATGG+TGG + chr2_3:48657929-48657948 None:intergenic 55.0%
GCATGCTGCAACTGCTTCCA+TGG + chr2_3:48658579-48658598 None:intergenic 55.0%
TGGAAGCAGTTGCAGCATGC+AGG - chr2_3:48658579-48658598 Msa0295850:five_prime_UTR 55.0%
CAACAACCGAATCTCCCGCC+TGG - chr2_3:48656900-48656919 Msa0295850:three_prime_UTR 60.0%
CGGAATCCAGGCGGGAGATT+CGG + chr2_3:48656909-48656928 None:intergenic 60.0%
GCAGTTGCAGCATGCAGGTG+AGG - chr2_3:48658584-48658603 Msa0295850:five_prime_UTR 60.0%
CAACAACCGAATCTCCCGCC+TGG - chr2_3:48656900-48656919 Msa0295850:three_prime_UTR 60.0%
CGGAATCCAGGCGGGAGATT+CGG + chr2_3:48656909-48656928 None:intergenic 60.0%
GCAGTTGCAGCATGCAGGTG+AGG - chr2_3:48658584-48658603 Msa0295850:five_prime_UTR 60.0%
GCAGCATGCAGGTGAGGCCA+TGG - chr2_3:48658590-48658609 Msa0295850:five_prime_UTR 65.0%
GCAGCATGCAGGTGAGGCCA+TGG - chr2_3:48658590-48658609 Msa0295850:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 48656740 48658707 48656740 ID=Msa0295850;Name=Msa0295850
chr2_3 mRNA 48656740 48658707 48656740 ID=Msa0295850-mRNA-1;Parent=Msa0295850;Name=Msa0295850-mRNA-1;_AED=0.08;_eAED=0.08;_QI=130|1|1|1|1|1|3|314|354
chr2_3 exon 48656740 48657626 48656740 ID=Msa0295850-mRNA-1:exon:15266;Parent=Msa0295850-mRNA-1
chr2_3 exon 48657808 48658115 48657808 ID=Msa0295850-mRNA-1:exon:15265;Parent=Msa0295850-mRNA-1
chr2_3 exon 48658394 48658707 48658394 ID=Msa0295850-mRNA-1:exon:15264;Parent=Msa0295850-mRNA-1
chr2_3 five_prime_UTR 48658578 48658707 48658578 ID=Msa0295850-mRNA-1:five_prime_utr;Parent=Msa0295850-mRNA-1
chr2_3 CDS 48658394 48658577 48658394 ID=Msa0295850-mRNA-1:cds;Parent=Msa0295850-mRNA-1
chr2_3 CDS 48657808 48658115 48657808 ID=Msa0295850-mRNA-1:cds;Parent=Msa0295850-mRNA-1
chr2_3 CDS 48657054 48657626 48657054 ID=Msa0295850-mRNA-1:cds;Parent=Msa0295850-mRNA-1
chr2_3 three_prime_UTR 48656740 48657053 48656740 ID=Msa0295850-mRNA-1:three_prime_utr;Parent=Msa0295850-mRNA-1
Gene Sequence

>Msa0295850

ATGGAAAGTACCGATTCATCAACTGGTTCGCAACAACCGAATCTCCCGCCTGGATTCCGATTTCACCCTACAGATGAAGAGCTTGTTGTTCATTACCTCAAGAAAAAAGCAGCTTCAGCTCCTTTACCAGTAGCCATCATAGCTGAAGTTGATCTCTACAAATTTGATCCATGGGAGCTACCAGCTAAGGCAACGTTTGGAGAGCAAGAGTGGTATTTCTTTAGTCCAAGGGACAGGAAGTATCCGAATGGAGCTAGGCCAAACAGGGCTGCAACTTCTGGTTATTGGAAGGCAACTGGTACTGATAAGCCTGTTTTAACTTCTGGTGGGACACAAAAAGTTGGTGTGAAGAAAGCTTTGGTTTTCTATGGTGGGAAACCACCAAGAGGTATCAAAACCAATTGGATCATGCATGAGTATAGGCTTGCTGATAATAAGCCTAATAATAGGCCTCCTGGTTGTGACTTGGGTAACAAGAAAAACTCTCTAAGGCTTGATGATTGGGTGTTGTGCCGGATCTACAAGAAAAGCAACACACATAGGTCACCAGTGGAACATGATAGGGAAGATTCAATGGATGATATGATTGGAGGAGTACCACCATCAATCAACGTGGGCCAAATGAGTGCTGCTTCAAGGTTTCATAATTTTTCAAGGTTGTCATCAAATAACTACAACAATGCATTGTTGGAAAATGACCAAAATTTATTAGAAGGAATGATGATGAATAACAACAATAATTTAGGAGGTTCAAATTCAAAGGCTGAACTATCATTTGTACCAACTATGACAACATCTTCAAATGCTCATTCACCTTCCAAAAGAACACTCTCTTCTCTTTATAATTGGAATGATGAAGATGTTGCAGCTCAAGTTGGTACTTCATCATCTAACAAAAGGTTTAGTTTGGAAAATGTTGTGAGGAATGATCATGAGAATGGAACTGTTGCTACTTCTTTTGCTTCTCTTCTTAATAATCTCCCCCAAACATCTTCATTGCATCAACCACAAACAATGTTGGGATCAATACCATATCAAATTCAAGGGATGAATTGGTATGGTTAA
Protein sequence

>Msa0295850

MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPVEHDREDSMDDMIGGVPPSINVGQMSAASRFHNFSRLSSNNYNNALLENDQNLLEGMMMNNNNNLGGSNSKAELSFVPTMTTSSNAHSPSKRTLSSLYNWNDEDVAAQVGTSSSNKRFSLENVVRNDHENGTVATSFASLLNNLPQTSSLHQPQTMLGSIPYQIQGMNWYG*