Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0546370 | XP_003606324.1 | 96.333 | 409 | 14 | 1 | 4 | 412 | 135 | 542 | 0.0 | 828 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0546370 | sp|Q9FYC2|PAO_ARATH | 75.245 | 408 | 97 | 3 | 8 | 412 | 131 | 537 | 0.0 | 663 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0546370 | G7JM88 | 96.333 | 409 | 14 | 1 | 4 | 412 | 135 | 542 | 0.0 | 828 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005630 | Msa0546370 | 0.810658 | 1.033020e-50 | -8.615850e-47 |
| Msa0021980 | Msa0546370 | 0.867820 | 1.032067e-65 | -8.615850e-47 |
| Msa0041780 | Msa0546370 | 0.834608 | 2.716324e-56 | -8.615850e-47 |
| Msa0050320 | Msa0546370 | 0.803231 | 3.847171e-49 | -8.615850e-47 |
| Msa0053960 | Msa0546370 | 0.807244 | 5.555817e-50 | -8.615850e-47 |
| Msa0085580 | Msa0546370 | 0.816071 | 6.678627e-52 | -8.615850e-47 |
| Msa0090350 | Msa0546370 | 0.807090 | 5.989303e-50 | -8.615850e-47 |
| Msa0096570 | Msa0546370 | 0.821108 | 4.810888e-53 | -8.615850e-47 |
| Msa0117300 | Msa0546370 | 0.824723 | 6.917253e-54 | -8.615850e-47 |
| Msa0121480 | Msa0546370 | 0.818618 | 1.784284e-52 | -8.615850e-47 |
| Msa0154720 | Msa0546370 | 0.803186 | 3.931928e-49 | -8.615850e-47 |
| Msa0160650 | Msa0546370 | 0.853831 | 1.842663e-61 | -8.615850e-47 |
| Msa0184030 | Msa0546370 | 0.813639 | 2.311361e-51 | -8.615850e-47 |
| Msa0188500 | Msa0546370 | 0.831011 | 2.125464e-55 | -8.615850e-47 |
| Msa0200840 | Msa0546370 | 0.851106 | 1.101487e-60 | -8.615850e-47 |
| Msa0200870 | Msa0546370 | 0.865908 | 4.195838e-65 | -8.615850e-47 |
| Msa0201130 | Msa0546370 | 0.813967 | 1.957633e-51 | -8.615850e-47 |
| Msa0203180 | Msa0546370 | 0.809437 | 1.893332e-50 | -8.615850e-47 |
| Msa0216550 | Msa0546370 | 0.811828 | 5.759699e-51 | -8.615850e-47 |
| Msa0223190 | Msa0546370 | 0.842727 | 2.167708e-58 | -8.615850e-47 |
| Msa0225880 | Msa0546370 | 0.804277 | 2.334051e-49 | -8.615850e-47 |
| Msa0230980 | Msa0546370 | 0.810822 | 9.521292e-51 | -8.615850e-47 |
| Msa0372990 | Msa0546370 | 0.824566 | 7.531241e-54 | -8.615850e-47 |
| Msa0378670 | Msa0546370 | 0.831019 | 2.116405e-55 | -8.615850e-47 |
| Msa0378700 | Msa0546370 | 0.834786 | 2.450843e-56 | -8.615850e-47 |
| Msa0387740 | Msa0546370 | 0.805603 | 1.232738e-49 | -8.615850e-47 |
| Msa0401570 | Msa0546370 | 0.800607 | 1.331598e-48 | -8.615850e-47 |
| Msa0403720 | Msa0546370 | 0.847349 | 1.223611e-59 | -8.615850e-47 |
| Msa0404180 | Msa0546370 | 0.822717 | 2.040259e-53 | -8.615850e-47 |
| Msa0408160 | Msa0546370 | 0.806269 | 8.927457e-50 | -8.615850e-47 |
| Msa0411000 | Msa0546370 | 0.804039 | 2.615057e-49 | -8.615850e-47 |
| Msa0421390 | Msa0546370 | 0.836157 | 1.103305e-56 | -8.615850e-47 |
| Msa0428330 | Msa0546370 | 0.823779 | 1.152400e-53 | -8.615850e-47 |
| Msa0431940 | Msa0546370 | 0.846384 | 2.246825e-59 | -8.615850e-47 |
| Msa0436590 | Msa0546370 | 0.801189 | 1.012450e-48 | -8.615850e-47 |
| Msa0436600 | Msa0546370 | 0.831890 | 1.291283e-55 | -8.615850e-47 |
| Msa0436610 | Msa0546370 | 0.818757 | 1.659614e-52 | -8.615850e-47 |
| Msa0448400 | Msa0546370 | 0.840690 | 7.469834e-58 | -8.615850e-47 |
| Msa0243470 | Msa0546370 | 0.854907 | 9.000036e-62 | -8.615850e-47 |
| Msa0243820 | Msa0546370 | 0.843844 | 1.091449e-58 | -8.615850e-47 |
| Msa0246300 | Msa0546370 | 0.807845 | 4.142415e-50 | -8.615850e-47 |
| Msa0256410 | Msa0546370 | 0.800838 | 1.194156e-48 | -8.615850e-47 |
| Msa0260470 | Msa0546370 | 0.808807 | 2.583217e-50 | -8.615850e-47 |
| Msa0264240 | Msa0546370 | 0.821736 | 3.445959e-53 | -8.615850e-47 |
| Msa0264420 | Msa0546370 | 0.865302 | 6.515326e-65 | -8.615850e-47 |
| Msa0270460 | Msa0546370 | 0.812264 | 4.626945e-51 | -8.615850e-47 |
| Msa0281940 | Msa0546370 | 0.830646 | 2.611600e-55 | -8.615850e-47 |
| Msa0282500 | Msa0546370 | 0.848373 | 6.389353e-60 | -8.615850e-47 |
| Msa0302310 | Msa0546370 | 0.856335 | 3.449021e-62 | -8.615850e-47 |
| Msa0319690 | Msa0546370 | -0.809755 | 1.617357e-50 | -8.615850e-47 |
| Msa0339560 | Msa0546370 | 0.823353 | 1.449946e-53 | -8.615850e-47 |
| Msa0339670 | Msa0546370 | 0.865039 | 7.882384e-65 | -8.615850e-47 |
| Msa0343990 | Msa0546370 | 0.816738 | 4.736308e-52 | -8.615850e-47 |
| Msa0352640 | Msa0546370 | 0.878980 | 1.809448e-69 | -8.615850e-47 |
| Msa0364010 | Msa0546370 | 0.828693 | 7.800312e-55 | -8.615850e-47 |
| Msa0496460 | Msa0546370 | 0.868277 | 7.357573e-66 | -8.615850e-47 |
| Msa0496470 | Msa0546370 | 0.882151 | 1.324336e-70 | -8.615850e-47 |
| Msa0496570 | Msa0546370 | 0.866858 | 2.096680e-65 | -8.615850e-47 |
| Msa0520810 | Msa0546370 | 0.838307 | 3.108026e-57 | -8.615850e-47 |
| Msa0546370 | Msa0554440 | 0.866527 | 2.670976e-65 | -8.615850e-47 |
| Msa0546370 | Msa0601920 | -0.830021 | 3.712388e-55 | -8.615850e-47 |
| Msa0546370 | Msa0623360 | 0.842480 | 2.521032e-58 | -8.615850e-47 |
| Msa0546370 | Msa0630850 | 0.937963 | 1.470642e-98 | -8.615850e-47 |
| Msa0546370 | Msa0643020 | -0.807306 | 5.392107e-50 | -8.615850e-47 |
| Msa0546370 | Msa0648200 | 0.854327 | 1.325289e-61 | -8.615850e-47 |
| Msa0546370 | Msa0648300 | 0.851470 | 8.693264e-61 | -8.615850e-47 |
| Msa0546370 | Msa0659020 | 0.802163 | 6.390569e-49 | -8.615850e-47 |
| Msa0546370 | Msa0664130 | 0.802564 | 5.285053e-49 | -8.615850e-47 |
| Msa0546370 | Msa0681880 | 0.936755 | 1.044523e-97 | -8.615850e-47 |
| Msa0546370 | Msa0682730 | -0.827044 | 1.944351e-54 | -8.615850e-47 |
| Msa0546370 | Msa0691140 | 0.844143 | 9.076173e-59 | -8.615850e-47 |
| Msa0546370 | Msa0704780 | 0.818279 | 2.129323e-52 | -8.615850e-47 |
| Msa0546370 | Msa0729780 | 0.813981 | 1.943823e-51 | -8.615850e-47 |
| Msa0546370 | Msa0734190 | 0.801423 | 9.066384e-49 | -8.615850e-47 |
| Msa0546370 | Msa0738600 | 0.808017 | 3.807039e-50 | -8.615850e-47 |
| Msa0546370 | Msa0770020 | 0.826045 | 3.365556e-54 | -8.615850e-47 |
| Msa0546370 | Msa0773260 | 0.804432 | 2.166021e-49 | -8.615850e-47 |
| Msa0546370 | Msa0775420 | 0.857849 | 1.232784e-62 | -8.615850e-47 |
| Msa0546370 | Msa0796460 | 0.870573 | 1.317289e-66 | -8.615850e-47 |
| Msa0546370 | Msa0807980 | 0.849675 | 2.776504e-60 | -8.615850e-47 |
| Msa0546370 | Msa0810590 | 0.803833 | 2.886068e-49 | -8.615850e-47 |
| Msa0546370 | Msa0812800 | 0.846355 | 2.287720e-59 | -8.615850e-47 |
| Msa0546370 | Msa0818950 | 0.806358 | 8.550041e-50 | -8.615850e-47 |
| Msa0546370 | Msa0834200 | 0.847768 | 9.381997e-60 | -8.615850e-47 |
| Msa0546370 | Msa0834240 | 0.834692 | 2.586806e-56 | -8.615850e-47 |
| Msa0546370 | Msa0835550 | 0.814350 | 1.611409e-51 | -8.615850e-47 |
| Msa0546370 | Msa0846300 | 0.819973 | 8.764797e-53 | -8.615850e-47 |
| Msa0546370 | Msa0848980 | 0.814266 | 1.681222e-51 | -8.615850e-47 |
| Msa0546370 | Msa0853150 | 0.805711 | 1.170044e-49 | -8.615850e-47 |
| Msa0546370 | Msa0871310 | 0.804413 | 2.185929e-49 | -8.615850e-47 |
| Msa0546370 | Msa0873010 | 0.819006 | 1.456829e-52 | -8.615850e-47 |
| Msa0546370 | Msa0927890 | 0.800204 | 1.608245e-48 | -8.615850e-47 |
| Msa0546370 | Msa0967250 | 0.800356 | 1.497585e-48 | -8.615850e-47 |
| Msa0546370 | Msa0975560 | 0.844454 | 7.486478e-59 | -8.615850e-47 |
| Msa0546370 | Msa0984820 | 0.808439 | 3.095447e-50 | -8.615850e-47 |
| Msa0546370 | Msa0984860 | 0.806328 | 8.675273e-50 | -8.615850e-47 |
| Msa0546370 | Msa0999590 | 0.846963 | 1.560547e-59 | -8.615850e-47 |
| Msa0546370 | Msa1038110 | 0.833225 | 6.025623e-56 | -8.615850e-47 |
| Msa0546370 | Msa1044450 | 0.809607 | 1.740797e-50 | -8.615850e-47 |
| Msa0546370 | Msa1053990 | -0.806656 | 7.400098e-50 | -8.615850e-47 |
| Msa0546370 | Msa1065620 | 0.801528 | 8.631026e-49 | -8.615850e-47 |
| Msa0546370 | Msa1081530 | 0.804599 | 1.999661e-49 | -8.615850e-47 |
| Msa0546370 | Msa1089130 | 0.803367 | 3.605257e-49 | -8.615850e-47 |
| Msa0546370 | Msa1101610 | 0.813194 | 2.896383e-51 | -8.615850e-47 |
| Msa0546370 | Msa1108530 | 0.814306 | 1.647962e-51 | -8.615850e-47 |
| Msa0546370 | Msa1129660 | 0.811168 | 8.010703e-51 | -8.615850e-47 |
| Msa0546370 | Msa1152280 | 0.814056 | 1.870715e-51 | -8.615850e-47 |
| Msa0546370 | Msa1164570 | 0.801668 | 8.076511e-49 | -8.615850e-47 |
| Msa0546370 | Msa1172070 | 0.805632 | 1.215602e-49 | -8.615850e-47 |
| Msa0546370 | Msa1186580 | 0.804940 | 1.696957e-49 | -8.615850e-47 |
| Msa0546370 | Msa1199580 | 0.843428 | 1.409753e-58 | -8.615850e-47 |
| Msa0546370 | Msa1204380 | 0.807380 | 5.200028e-50 | -8.615850e-47 |
| Msa0546370 | Msa1207760 | 0.810802 | 9.615053e-51 | -8.615850e-47 |
| Msa0546370 | Msa1211260 | 0.807968 | 3.900675e-50 | -8.615850e-47 |
| Msa0546370 | Msa1211300 | 0.807018 | 6.203860e-50 | -8.615850e-47 |
| Msa0546370 | Msa1211390 | 0.801929 | 7.140209e-49 | -8.615850e-47 |
| Msa0546370 | Msa1216700 | 0.827811 | 1.272886e-54 | -8.615850e-47 |
| Msa0546370 | Msa1216900 | 0.821448 | 4.015891e-53 | -8.615850e-47 |
| Msa0546370 | Msa1229770 | 0.827765 | 1.305538e-54 | -8.615850e-47 |
| Msa0546370 | Msa1240060 | -0.816231 | 6.151002e-52 | -8.615850e-47 |
| Msa0546370 | Msa1240820 | 0.815183 | 1.053167e-51 | -8.615850e-47 |
| Msa0546370 | Msa1262740 | 0.836307 | 1.010318e-56 | -8.615850e-47 |
| Msa0546370 | Msa1263610 | 0.840804 | 6.971416e-58 | -8.615850e-47 |
| Msa0546370 | Msa1264140 | 0.801401 | 9.161298e-49 | -8.615850e-47 |
| Msa0546370 | Msa1281370 | -0.808535 | 2.953140e-50 | -8.615850e-47 |
| Msa0546370 | Msa1282210 | 0.813618 | 2.336893e-51 | -8.615850e-47 |
| Msa0546370 | Msa1296600 | 0.801617 | 8.275905e-49 | -8.615850e-47 |
| Msa0546370 | Msa1298540 | 0.802895 | 4.515263e-49 | -8.615850e-47 |
| Msa0546370 | Msa1299370 | 0.802264 | 6.092206e-49 | -8.615850e-47 |
| Msa0546370 | Msa1320530 | -0.836987 | 6.778585e-57 | -8.615850e-47 |
| Msa0546370 | Msa1328630 | 0.838759 | 2.375607e-57 | -8.615850e-47 |
| Msa0546370 | Msa1328720 | 0.843617 | 1.255062e-58 | -8.615850e-47 |
| Msa0546370 | Msa1329010 | 0.809725 | 1.641742e-50 | -8.615850e-47 |
| Msa0546370 | Msa1329660 | 0.831032 | 2.100082e-55 | -8.615850e-47 |
| Msa0546370 | Msa1339310 | 0.800845 | 1.190701e-48 | -8.615850e-47 |
| Msa0546370 | Msa1342400 | 0.857146 | 1.990570e-62 | -8.615850e-47 |
| Msa0546370 | Msa1351590 | 0.800486 | 1.409350e-48 | -8.615850e-47 |
| Msa0546370 | Msa1353280 | 0.880286 | 6.221940e-70 | -8.615850e-47 |
| Msa0546370 | Msa1357720 | 0.805274 | 1.444994e-49 | -8.615850e-47 |
| Msa0546370 | Msa1368660 | 0.849453 | 3.201930e-60 | -8.615850e-47 |
| Msa0546370 | Msa1370630 | 0.805900 | 1.067682e-49 | -8.615850e-47 |
| Msa0546370 | Msa1371360 | 0.811814 | 5.798286e-51 | -8.615850e-47 |
| Msa0546370 | Msa1401000 | 0.814707 | 1.342964e-51 | -8.615850e-47 |
| Msa0546370 | Msa1413900 | 0.803644 | 3.159309e-49 | -8.615850e-47 |
| Msa0546370 | Msa1415560 | 0.842787 | 2.088980e-58 | -8.615850e-47 |
| Msa0546370 | Msa1427180 | 0.847916 | 8.544672e-60 | -8.615850e-47 |
| Msa0546370 | Msa1428440 | 0.809311 | 2.014613e-50 | -8.615850e-47 |
| Msa0546370 | Msa1428560 | 0.842994 | 1.840725e-58 | -8.615850e-47 |
| Msa0546370 | Msa1431180 | 0.816263 | 6.052100e-52 | -8.615850e-47 |
| Msa0546370 | Msa1433380 | 0.815736 | 7.932938e-52 | -8.615850e-47 |
| Msa0546370 | Msa1442070 | 0.806754 | 7.054874e-50 | -8.615850e-47 |
| Msa0546370 | Msa1445700 | 0.846218 | 2.493463e-59 | -8.615850e-47 |
| Msa0546370 | Msa1446220 | 0.833842 | 4.226476e-56 | -8.615850e-47 |
| Msa0546370 | Msa1459630 | 0.830632 | 2.633182e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0546370 | MtrunA17_Chr4g0027961 | 96.333 | 409 | 14 | 1 | 4 | 412 | 135 | 542 | 0.0 | 828 |
| Msa0546370 | MtrunA17_Chr8g0378721 | 34.192 | 427 | 229 | 19 | 8 | 409 | 128 | 527 | 3.25e-64 | 214 |
| Msa0546370 | MtrunA17_Chr8g0378671 | 33.568 | 426 | 234 | 17 | 8 | 410 | 128 | 527 | 3.70e-63 | 212 |
| Msa0546370 | MtrunA17_Chr8g0378701 | 33.692 | 279 | 148 | 11 | 8 | 267 | 142 | 402 | 1.63e-39 | 146 |
| Msa0546370 | MtrunA17_Chr3g0136771 | 28.777 | 417 | 234 | 16 | 8 | 390 | 144 | 531 | 1.62e-37 | 143 |
| Msa0546370 | MtrunA17_Chr8g0378691 | 33.083 | 133 | 80 | 5 | 284 | 410 | 26 | 155 | 1.67e-14 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0546370 | AT3G44880.1 | 75.245 | 408 | 97 | 3 | 8 | 412 | 131 | 537 | 0.0 | 663 |
| Msa0546370 | AT4G25650.1 | 31.364 | 440 | 235 | 16 | 8 | 411 | 128 | 536 | 2.42e-60 | 204 |
| Msa0546370 | AT4G25650.2 | 30.022 | 463 | 234 | 17 | 8 | 411 | 128 | 559 | 5.17e-57 | 196 |
| Msa0546370 | AT2G24820.1 | 27.356 | 435 | 245 | 16 | 8 | 402 | 130 | 533 | 9.13e-38 | 144 |
Find 120 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAACATGGTGCAATAAATT+TGG | 0.238122 | 4_1:-38034004 | None:intergenic |
| ATCTCCTCTCCATAGGTTAC+AGG | 0.261578 | 4_1:+38033886 | Msa0546370:intron |
| CTCAGGGATTGCTCTTTGTT+TGG | 0.265240 | 4_1:+38032529 | Msa0546370:CDS |
| CTGCTCTTGCCGAACCATTC+AGG | 0.272155 | 4_1:-38035014 | None:intergenic |
| ATATCCATATTACCCATTTC+TGG | 0.295421 | 4_1:-38034405 | None:intergenic |
| GTTTCCTACCTTGGTGTCTC+AGG | 0.314846 | 4_1:+38032512 | Msa0546370:CDS |
| TACTCAGCTGCGCATAGTTT+TGG | 0.327030 | 4_1:+38035318 | Msa0546370:CDS |
| GATCCAACAGCACGCGCTTC+GGG | 0.334072 | 4_1:-38032468 | None:intergenic |
| TTCTTCCAGCTCACGGTGCC+AGG | 0.334083 | 4_1:+38034490 | Msa0546370:CDS |
| CCGTGGTTGGTGACCAGAAA+TGG | 0.334810 | 4_1:+38034392 | Msa0546370:CDS |
| TGCTACTAGGTTTCCTACCT+TGG | 0.353927 | 4_1:+38032503 | Msa0546370:CDS |
| GTGACCAGAAATGGGTAATA+TGG | 0.353988 | 4_1:+38034401 | Msa0546370:CDS |
| GAAGGAAGGATAGATGAAAA+TGG | 0.368399 | 4_1:+38032363 | Msa0546370:CDS |
| GTTAATGTCACCGCCATTCT+CGG | 0.368858 | 4_1:-38034898 | None:intergenic |
| TTGTGTTGGCATTTAGAAAT+TGG | 0.374763 | 4_1:+38034967 | Msa0546370:CDS |
| GTCACCAACCACGGGGAGTT+TGG | 0.380037 | 4_1:-38034383 | None:intergenic |
| AGATGGATTCACGTGGTTCA+TGG | 0.404907 | 4_1:+38033941 | Msa0546370:CDS |
| TCACGGTGCCAGGGCCTGCC+TGG | 0.405008 | 4_1:+38034500 | Msa0546370:CDS |
| TTTGTTTGGCCTGATGAGAA+TGG | 0.405990 | 4_1:+38032543 | Msa0546370:CDS |
| GCACGCGCTTCGGGACCTTC+AGG | 0.406540 | 4_1:-38032459 | None:intergenic |
| CAGGCCCTGGCACCGTGAGC+TGG | 0.407256 | 4_1:-38034495 | None:intergenic |
| TTCTCCCAACCATTCTCATC+AGG | 0.410926 | 4_1:-38032552 | None:intergenic |
| GGTCCCGAAGCGCGTGCTGT+TGG | 0.424723 | 4_1:+38032465 | Msa0546370:CDS |
| CTCCTAGAGCTTGTGCTACT+AGG | 0.425826 | 4_1:+38032490 | Msa0546370:CDS |
| GCAACTAGTAATAAAACCTT+AGG | 0.427716 | 4_1:-38035452 | None:intergenic |
| ACTTGCCACCAGGCAGGCCC+TGG | 0.430231 | 4_1:-38034508 | None:intergenic |
| TGCATACTATATGCAAGGTC+CGG | 0.431269 | 4_1:-38035736 | None:intergenic |
| AGATCCAACAGCACGCGCTT+CGG | 0.435428 | 4_1:-38032469 | None:intergenic |
| AGCTTGTAAAGGAGCTTATG+AGG | 0.440308 | 4_1:+38035222 | Msa0546370:CDS |
| GATGGATTCACGTGGTTCAT+GGG | 0.447972 | 4_1:+38033942 | Msa0546370:CDS |
| ATCCCTCAGGCTTCACCTGA+AGG | 0.455756 | 4_1:+38032444 | Msa0546370:CDS |
| TTTCCTACCTTGGTGTCTCA+GGG | 0.456423 | 4_1:+38032513 | Msa0546370:CDS |
| AACTTGCAGTGTTCTTATCA+TGG | 0.471539 | 4_1:+38032387 | Msa0546370:CDS |
| TAAACAAATCATTACATTGG+AGG | 0.472678 | 4_1:-38032591 | None:intergenic |
| TGAACGTGTTATTACTCCTA+AGG | 0.474031 | 4_1:+38035436 | Msa0546370:exon |
| CCACGTGAATCCATCTTGAA+TGG | 0.476840 | 4_1:-38033934 | None:intergenic |
| TGTCTCAGGTGGTTCCTAGA+TGG | 0.480851 | 4_1:+38034793 | Msa0546370:intron |
| GCATACTATATGCAAGGTCC+GGG | 0.487929 | 4_1:-38035735 | None:intergenic |
| ACACAACTGTTGCACCAGTC+AGG | 0.489551 | 4_1:-38035267 | None:intergenic |
| CGTGGTTGGTGACCAGAAAT+GGG | 0.494565 | 4_1:+38034393 | Msa0546370:CDS |
| ATGTTCACCGTCGCAAACTC+TGG | 0.495962 | 4_1:-38032935 | None:intergenic |
| CGAGTCTTACCAGGTGCCAT+GGG | 0.496305 | 4_1:-38034442 | None:intergenic |
| AACCGTACTATCAAAACGTC+AGG | 0.497409 | 4_1:+38035055 | Msa0546370:CDS |
| AAGGTCCGGGGTTCGAATCC+CGG | 0.497578 | 4_1:-38035722 | None:intergenic |
| ATCACGTATGATTATTTCGA+AGG | 0.504224 | 4_1:+38035645 | Msa0546370:three_prime_UTR |
| AATGGCCAACCTGAATGGTT+CGG | 0.505921 | 4_1:+38035005 | Msa0546370:CDS |
| TTCAATGTCCCCATGGCACC+TGG | 0.510022 | 4_1:+38034433 | Msa0546370:CDS |
| TTTGGCCTGATGAGAATGGT+TGG | 0.514461 | 4_1:+38032547 | Msa0546370:CDS |
| TCGAAATTTCTTCCAGCTCA+CGG | 0.516385 | 4_1:+38034483 | Msa0546370:CDS |
| GCGAGTCTTACCAGGTGCCA+TGG | 0.519997 | 4_1:-38034443 | None:intergenic |
| ACGGCAATGGCCAACCTGAA+TGG | 0.522604 | 4_1:+38035000 | Msa0546370:CDS |
| TGCAGTGTTCTTATCATGGG+TGG | 0.523912 | 4_1:+38032391 | Msa0546370:CDS |
| CTAAAGTGTTCAGCTTGTAA+AGG | 0.524879 | 4_1:+38035211 | Msa0546370:CDS |
| CAAGTTTGAAGAGTGTTCAA+AGG | 0.525022 | 4_1:+38031157 | Msa0546370:CDS |
| TGGCTGAGGCGACACGGCAA+TGG | 0.525095 | 4_1:+38034987 | Msa0546370:CDS |
| AGGTGCCATGGGGACATTGA+AGG | 0.525388 | 4_1:-38034431 | None:intergenic |
| GTACGGTTGAAGGCAATGGC+TGG | 0.525732 | 4_1:-38035040 | None:intergenic |
| CATCTTGAATGGAAGAGGCT+TGG | 0.526200 | 4_1:-38033923 | None:intergenic |
| AGTGGCCGGGATTCGAACCC+CGG | 0.527243 | 4_1:+38035717 | Msa0546370:three_prime_UTR |
| TTGGCCTGATGAGAATGGTT+GGG | 0.528911 | 4_1:+38032548 | Msa0546370:CDS |
| GAATCCATCTTGAATGGAAG+AGG | 0.529803 | 4_1:-38033928 | None:intergenic |
| ACTTGCAGTGTTCTTATCAT+GGG | 0.533069 | 4_1:+38032388 | Msa0546370:CDS |
| CATTTCTGGTCACCAACCAC+GGG | 0.533924 | 4_1:-38034391 | None:intergenic |
| CTACGGCTATGATACTCTCA+TGG | 0.535693 | 4_1:+38032973 | Msa0546370:CDS |
| CGGTGCCAGGGCCTGCCTGG+TGG | 0.541920 | 4_1:+38034503 | Msa0546370:CDS |
| ACGATGGAGCGAGTCTTACC+AGG | 0.542041 | 4_1:-38034451 | None:intergenic |
| TTTCTCGCAGAAACCGAGAA+TGG | 0.544070 | 4_1:+38034885 | Msa0546370:CDS |
| GAACACTCTTCAAACTTGTG+TGG | 0.544087 | 4_1:-38031152 | None:intergenic |
| GTCCAATGTTCATACCATCT+AGG | 0.546736 | 4_1:-38034807 | None:intergenic |
| GGTGACATGATTGTACTTCA+AGG | 0.548561 | 4_1:+38034849 | Msa0546370:CDS |
| TCTTCCAGCTCACGGTGCCA+GGG | 0.550242 | 4_1:+38034491 | Msa0546370:CDS |
| CAAGCCTCTTCCATTCAAGA+TGG | 0.553250 | 4_1:+38033924 | Msa0546370:CDS |
| AAGACAAATGTGGCGTAATG+AGG | 0.555400 | 4_1:+38031124 | None:intergenic |
| ATGCGCAGCTGAGTATCTGA+TGG | 0.558491 | 4_1:-38035310 | None:intergenic |
| GATAGTACGGTTGAAGGCAA+TGG | 0.559294 | 4_1:-38035044 | None:intergenic |
| CTTATGAGGGATTCCAAACA+TGG | 0.560004 | 4_1:+38035236 | Msa0546370:CDS |
| AGGTTGCACTGTGATCCCTC+AGG | 0.562050 | 4_1:+38032431 | Msa0546370:CDS |
| AATCTTACTTGCCACCAGGC+AGG | 0.562524 | 4_1:-38034514 | None:intergenic |
| ATCGGCCTGTGTTGGTGTGA+AGG | 0.562936 | 4_1:-38034940 | None:intergenic |
| ACAGGCCGATCGCTTTGTGT+TGG | 0.566142 | 4_1:+38034953 | Msa0546370:CDS |
| AACCTAGTAGCACAAGCTCT+AGG | 0.570794 | 4_1:-38032492 | None:intergenic |
| CCATTTCTGGTCACCAACCA+CGG | 0.571640 | 4_1:-38034392 | None:intergenic |
| GACCTTCAGGTGAAGCCTGA+GGG | 0.571686 | 4_1:-38032446 | None:intergenic |
| TTCCTAGATGGTATGAACAT+TGG | 0.578101 | 4_1:+38034805 | Msa0546370:CDS |
| ACAAAGCGATCGGCCTGTGT+TGG | 0.578127 | 4_1:-38034948 | None:intergenic |
| GACAATGCATACTATATGCA+AGG | 0.578961 | 4_1:-38035741 | None:intergenic |
| GCTTGTAAAGGAGCTTATGA+GGG | 0.580240 | 4_1:+38035223 | Msa0546370:CDS |
| ATGGATTCACGTGGTTCATG+GGG | 0.586611 | 4_1:+38033943 | Msa0546370:CDS |
| TGGCATTTAGAAATTGGCTG+AGG | 0.593473 | 4_1:+38034973 | Msa0546370:CDS |
| TCTTGCCGAACCATTCAGGT+TGG | 0.593673 | 4_1:-38035010 | None:intergenic |
| ACATGTTAACATTAACATCA+AGG | 0.598287 | 4_1:-38035561 | None:intergenic |
| AGAAATTGGCTGAGGCGACA+CGG | 0.601844 | 4_1:+38034981 | Msa0546370:CDS |
| GATACCAAACTCCCCGTGGT+TGG | 0.603630 | 4_1:+38034379 | Msa0546370:CDS |
| AAATGCCAACACAAAGCGAT+CGG | 0.604570 | 4_1:-38034958 | None:intergenic |
| TAAATTTGGAACTGATCCGT+GGG | 0.605118 | 4_1:-38033990 | None:intergenic |
| ACATGGCAGAAAATCCTGAC+TGG | 0.607454 | 4_1:+38035253 | Msa0546370:CDS |
| CCATTCAAGATGGATTCACG+TGG | 0.609365 | 4_1:+38033934 | Msa0546370:CDS |
| CCTCACCTTCACACCAACAC+AGG | 0.610530 | 4_1:+38034935 | Msa0546370:CDS |
| ATGTTCCTTCAATGTCCCCA+TGG | 0.611264 | 4_1:+38034426 | Msa0546370:CDS |
| ATAAATTTGGAACTGATCCG+TGG | 0.611314 | 4_1:-38033991 | None:intergenic |
| TGAGCAAAATCAATGTGAGA+AGG | 0.619222 | 4_1:-38033010 | None:intergenic |
| ATTTCGAGCACTGCAAACGA+TGG | 0.623592 | 4_1:-38034467 | None:intergenic |
| AATTGTAAATGTTAGAGATG+AGG | 0.623678 | 4_1:+38035476 | Msa0546370:three_prime_UTR |
| CCTGTGTTGGTGTGAAGGTG+AGG | 0.628478 | 4_1:-38034935 | None:intergenic |
| GGACCTTCAGGTGAAGCCTG+AGG | 0.630949 | 4_1:-38032447 | None:intergenic |
| TAGAAATCTTACTTGCCACC+AGG | 0.633598 | 4_1:-38034518 | None:intergenic |
| GAGCTAATGATGGGAACCCA+CGG | 0.640090 | 4_1:+38033974 | Msa0546370:CDS |
| TACTTGTTAATATAATAACA+TGG | 0.641143 | 4_1:-38034018 | None:intergenic |
| GAGCAATCCCTGAGACACCA+AGG | 0.653614 | 4_1:-38032520 | None:intergenic |
| AATCCCTGAGACACCAAGGT+AGG | 0.654755 | 4_1:-38032516 | None:intergenic |
| TGAACATTGGACTTCAAACA+AGG | 0.656690 | 4_1:+38034818 | Msa0546370:CDS |
| CTCGCAGAAACCGAGAATGG+CGG | 0.656709 | 4_1:+38034888 | Msa0546370:CDS |
| ACTTCAAACAAGGTATATGA+CGG | 0.664094 | 4_1:+38034828 | Msa0546370:CDS |
| CCTCTCCATAGGTTACAGGA+AGG | 0.690079 | 4_1:+38033890 | Msa0546370:intron |
| TACACATATTAACGTACACG+TGG | 0.692393 | 4_1:-38035507 | None:intergenic |
| AGTAAAACCAGAGTTTGCGA+CGG | 0.704753 | 4_1:+38032928 | Msa0546370:CDS |
| CATACTATATGCAAGGTCCG+GGG | 0.707751 | 4_1:-38035734 | None:intergenic |
| GAGTCTTACCAGGTGCCATG+GGG | 0.713819 | 4_1:-38034441 | None:intergenic |
| GATCGATACCAAACTCCCCG+TGG | 0.727360 | 4_1:+38034375 | Msa0546370:CDS |
| ATTTCTGGTCACCAACCACG+GGG | 0.751627 | 4_1:-38034390 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTAATTTTTAATCACTT+AGG | + | chr4_1:38033363-38033382 | Msa0546370:intron | 10.0% |
| !!! | TATTCATTTTTAATTGAAAA+AGG | + | chr4_1:38034178-38034197 | Msa0546370:intron | 10.0% |
| !! | AAAAAAAAGAAGAAAGAAAT+TGG | + | chr4_1:38031333-38031352 | Msa0546370:intron | 15.0% |
| !! | AATATTAACATTATTACAAG+TGG | - | chr4_1:38031759-38031778 | None:intergenic | 15.0% |
| !! | AATTAAACAAATCATTACAT+TGG | - | chr4_1:38032597-38032616 | None:intergenic | 15.0% |
| !! | TTAGAAAAATTGTTGTAATT+GGG | + | chr4_1:38032811-38032830 | Msa0546370:intron | 15.0% |
| !! | TAAATTTATCAAATCCAAAA+GGG | - | chr4_1:38033729-38033748 | None:intergenic | 15.0% |
| !! | ATAAATTTATCAAATCCAAA+AGG | - | chr4_1:38033730-38033749 | None:intergenic | 15.0% |
| !!! | TACTTGTTAATATAATAACA+TGG | - | chr4_1:38034021-38034040 | None:intergenic | 15.0% |
| !!! | AAATTAAGAACTATTTTTTC+AGG | + | chr4_1:38034347-38034366 | Msa0546370:intron | 15.0% |
| !!! | AATCTTTATGTATGTTTTTT+TGG | + | chr4_1:38035693-38035712 | Msa0546370:three_prime_UTR | 15.0% |
| !! | CAATTTAGTCAAAAAAACAA+AGG | - | chr4_1:38031692-38031711 | None:intergenic | 20.0% |
| !!! | NNNNNNNNCTCACTTGATTT+TGG | - | chr4_1:38031968-38031987 | None:intergenic | 20.0% |
| !! | TGTTATAAGTAAGTTATGTT+TGG | - | chr4_1:38032168-38032187 | None:intergenic | 20.0% |
| !! | CTTAGAAAAATTGTTGTAAT+TGG | + | chr4_1:38032810-38032829 | Msa0546370:intron | 20.0% |
| !! | TATAACATAACATTTCTAAG+TGG | - | chr4_1:38032837-38032856 | None:intergenic | 20.0% |
| !!! | TTGCTATTAAGAATTTATCT+AGG | + | chr4_1:38033270-38033289 | Msa0546370:intron | 20.0% |
| !!! | ATTATTAGGTATTGTTTGTT+AGG | + | chr4_1:38033836-38033855 | Msa0546370:intron | 20.0% |
| !!! | TTATTAGGTATTGTTTGTTA+GGG | + | chr4_1:38033837-38033856 | Msa0546370:intron | 20.0% |
| !!! | AAATGAATACTACTCTTTTA+TGG | - | chr4_1:38034167-38034186 | None:intergenic | 20.0% |
| !!! | TCATTTTTAATTGAAAAAGG+AGG | + | chr4_1:38034181-38034200 | Msa0546370:intron | 20.0% |
| !!! | CATTTTTAATTGAAAAAGGA+GGG | + | chr4_1:38034182-38034201 | Msa0546370:intron | 20.0% |
| !!! | TTCTATGAAACCATTTTATT+CGG | + | chr4_1:38034672-38034691 | Msa0546370:intron | 20.0% |
| !! | TAAAAATCTTCCGAATAAAA+TGG | - | chr4_1:38034685-38034704 | None:intergenic | 20.0% |
| !!! | AAACAAAATTGTTTTTCAGT+TGG | - | chr4_1:38035387-38035406 | None:intergenic | 20.0% |
| !! | ACAAGTAATACATGCATTTT+TGG | + | chr4_1:38031200-38031219 | Msa0546370:intron | 25.0% |
| !!! | AGTGACCAAATCAAATTTTT+TGG | + | chr4_1:38031372-38031391 | Msa0546370:intron | 25.0% |
| ! | CATGACCAAAAAATTTGATT+TGG | - | chr4_1:38031380-38031399 | None:intergenic | 25.0% |
| ! | GAAATTTACATACAACTACA+AGG | - | chr4_1:38031654-38031673 | None:intergenic | 25.0% |
| ! | AATTTACACGAGAAAATTTC+AGG | - | chr4_1:38031732-38031751 | None:intergenic | 25.0% |
| ! | AAAAACCAACCAAATCATAA+AGG | - | chr4_1:38032339-38032358 | None:intergenic | 25.0% |
| ! | TAAACAAATCATTACATTGG+AGG | - | chr4_1:38032594-38032613 | None:intergenic | 25.0% |
| !! | AGTTGATATAAGTCCATAAT+AGG | + | chr4_1:38032729-38032748 | Msa0546370:intron | 25.0% |
| ! | TTAGATCATTGAACCTATTA+TGG | - | chr4_1:38032745-38032764 | None:intergenic | 25.0% |
| !! | ATGGTAAAATTGTGTTTTTC+AGG | + | chr4_1:38032891-38032910 | Msa0546370:intron | 25.0% |
| !!! | ACCTTTTTAGCAAAACAAAA+GGG | + | chr4_1:38033390-38033409 | Msa0546370:intron | 25.0% |
| !!! | TCTTCATATCTAGCTTTTAA+AGG | - | chr4_1:38033450-38033469 | None:intergenic | 25.0% |
| ! | TTAAAAGCTAGATATGAAGA+CGG | + | chr4_1:38033450-38033469 | Msa0546370:intron | 25.0% |
| ! | TATAAATTGGTACAGGATAT+TGG | - | chr4_1:38033597-38033616 | None:intergenic | 25.0% |
| ! | TTGTAGGAGTTGAAATTATT+AGG | + | chr4_1:38033822-38033841 | Msa0546370:intron | 25.0% |
| ! | ATAACATGGTGCAATAAATT+TGG | - | chr4_1:38034007-38034026 | None:intergenic | 25.0% |
| !! | AGTACTTTTCATATGAATTC+TGG | + | chr4_1:38034062-38034081 | Msa0546370:intron | 25.0% |
| ! | AGCATCAAATAACGTAAAAT+GGG | - | chr4_1:38034097-38034116 | None:intergenic | 25.0% |
| ! | TAGCATCAAATAACGTAAAA+TGG | - | chr4_1:38034098-38034117 | None:intergenic | 25.0% |
| !! | CGGAAGATTTTTAAACAAAT+TGG | + | chr4_1:38034692-38034711 | Msa0546370:intron | 25.0% |
| !!! | TTCTAGGATAAAATATTTCC+AGG | + | chr4_1:38034739-38034758 | Msa0546370:intron | 25.0% |
| !!! | TCAAAGTTGTGTTTTATTCT+TGG | - | chr4_1:38035136-38035155 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTCATGTAGATGT+TGG | + | chr4_1:38035168-38035187 | Msa0546370:intron | 25.0% |
| !!! | ATTGTTTTTCAGTTGGTTTA+TGG | - | chr4_1:38035380-38035399 | None:intergenic | 25.0% |
| ! | AATTGTAAATGTTAGAGATG+AGG | + | chr4_1:38035476-38035495 | Msa0546370:three_prime_UTR | 25.0% |
| ! | ACATGTTAACATTAACATCA+AGG | - | chr4_1:38035564-38035583 | None:intergenic | 25.0% |
| !!! | TATGTATGTTTTTTTGGTAG+TGG | + | chr4_1:38035699-38035718 | Msa0546370:three_prime_UTR | 25.0% |
| TTCAAAGGTTTGATGTATGT+AGG | + | chr4_1:38031172-38031191 | Msa0546370:intron | 30.0% | |
| TTGGACCAAGAATATGAATT+TGG | + | chr4_1:38031253-38031272 | Msa0546370:intron | 30.0% | |
| TGTGACCAAATTCATATTCT+TGG | - | chr4_1:38031261-38031280 | None:intergenic | 30.0% | |
| TTTCTCTCTCTTATTGTTGT+GGG | - | chr4_1:38031303-38031322 | None:intergenic | 30.0% | |
| ! | TTTTCTCTCTCTTATTGTTG+TGG | - | chr4_1:38031304-38031323 | None:intergenic | 30.0% |
| GAAAGAAATTGGCAATACTT+TGG | + | chr4_1:38031344-38031363 | Msa0546370:intron | 30.0% | |
| ! | AGTCATCTAGATAGTCATTT+TGG | + | chr4_1:38031492-38031511 | Msa0546370:intron | 30.0% |
| !! | TCATTTTGGAGAAAAACAGT+GGG | + | chr4_1:38031506-38031525 | Msa0546370:intron | 30.0% |
| TTGATCACAATTACATGTAG+CGG | - | chr4_1:38031906-38031925 | None:intergenic | 30.0% | |
| ACTTATTTGAGCACATCTAT+TGG | - | chr4_1:38032303-38032322 | None:intergenic | 30.0% | |
| GTAAACTGACCTTTATGATT+TGG | + | chr4_1:38032327-38032346 | Msa0546370:intron | 30.0% | |
| TTATGGACTTATATCAACTC+AGG | - | chr4_1:38032728-38032747 | None:intergenic | 30.0% | |
| CTAAGAAACCAACATAACTA+GGG | - | chr4_1:38032795-38032814 | None:intergenic | 30.0% | |
| TCTAAGAAACCAACATAACT+AGG | - | chr4_1:38032796-38032815 | None:intergenic | 30.0% | |
| TTTACCATGCAGATCAATAA+AGG | - | chr4_1:38032879-38032898 | None:intergenic | 30.0% | |
| !! | CACTCTTTAACTTGACTTTA+TGG | + | chr4_1:38033050-38033069 | Msa0546370:intron | 30.0% |
| AAATATATGTGATGCTGATG+TGG | + | chr4_1:38033157-38033176 | Msa0546370:intron | 30.0% | |
| !! | CACCTTTTTAGCAAAACAAA+AGG | + | chr4_1:38033389-38033408 | Msa0546370:intron | 30.0% |
| !!! | TCCCTTTTGTTTTGCTAAAA+AGG | - | chr4_1:38033394-38033413 | None:intergenic | 30.0% |
| !!! | CATATCTAGCTTTTAAAGGA+GGG | - | chr4_1:38033446-38033465 | None:intergenic | 30.0% |
| !!! | TCATATCTAGCTTTTAAAGG+AGG | - | chr4_1:38033447-38033466 | None:intergenic | 30.0% |
| GTGTTTGGGTACTTATAAAT+TGG | - | chr4_1:38033610-38033629 | None:intergenic | 30.0% | |
| TATATTAACAAGTAAGCCAG+CGG | + | chr4_1:38034027-38034046 | Msa0546370:intron | 30.0% | |
| !! | TGAAAAGTACTTTCATGCAA+AGG | - | chr4_1:38034053-38034072 | None:intergenic | 30.0% |
| ATGAACTATGTACTTGTTCA+TGG | + | chr4_1:38034141-38034160 | Msa0546370:intron | 30.0% | |
| ! | ACTGTTTTCTTTCCATTTGT+TGG | + | chr4_1:38034310-38034329 | Msa0546370:intron | 30.0% |
| ATATCCATATTACCCATTTC+TGG | - | chr4_1:38034408-38034427 | None:intergenic | 30.0% | |
| ACATGAACAAGAAAATCGTT+AGG | - | chr4_1:38034776-38034795 | None:intergenic | 30.0% | |
| ACTTCAAACAAGGTATATGA+CGG | + | chr4_1:38034828-38034847 | Msa0546370:CDS | 30.0% | |
| ! | TTGTGTTGGCATTTAGAAAT+TGG | + | chr4_1:38034967-38034986 | Msa0546370:CDS | 30.0% |
| ! | GTTTTGTAGACAATGGAAAA+CGG | - | chr4_1:38035114-38035133 | None:intergenic | 30.0% |
| !!! | ATTCTTGGTTTTGTAGACAA+TGG | - | chr4_1:38035121-38035140 | None:intergenic | 30.0% |
| TTGGTTTATGGAAAAAGCTA+AGG | - | chr4_1:38035368-38035387 | None:intergenic | 30.0% | |
| GCAACTAGTAATAAAACCTT+AGG | - | chr4_1:38035455-38035474 | None:intergenic | 30.0% | |
| ATCACGTATGATTATTTCGA+AGG | + | chr4_1:38035645-38035664 | Msa0546370:three_prime_UTR | 30.0% | |
| !! | CAAGTTTGAAGAGTGTTCAA+AGG | + | chr4_1:38031157-38031176 | Msa0546370:CDS | 35.0% |
| !!! | ACATGCATTTTTGGTACTTC+AGG | + | chr4_1:38031209-38031228 | Msa0546370:intron | 35.0% |
| !! | GTCATTTTGGAGAAAAACAG+TGG | + | chr4_1:38031505-38031524 | Msa0546370:intron | 35.0% |
| TTATATGACACTACAAGCCA+TGG | - | chr4_1:38031542-38031561 | None:intergenic | 35.0% | |
| CTTGTAGTGTCATATAAACG+TGG | + | chr4_1:38031545-38031564 | Msa0546370:intron | 35.0% | |
| ATCGGTTGAACTAAGTCTTA+CGG | - | chr4_1:38031602-38031621 | None:intergenic | 35.0% | |
| AACACGAGTATGAGCATTAT+CGG | - | chr4_1:38031620-38031639 | None:intergenic | 35.0% | |
| GCTACATGTAATTGTGATCA+AGG | + | chr4_1:38031905-38031924 | Msa0546370:intron | 35.0% | |
| TTTGTGCAATAAGCACATGT+AGG | - | chr4_1:38031942-38031961 | None:intergenic | 35.0% | |
| !! | AGTAAGTTATGTTTGGTGTC+AGG | - | chr4_1:38032161-38032180 | None:intergenic | 35.0% |
| CAAACACTTGTAAGAGCTTA+TGG | - | chr4_1:38032224-38032243 | None:intergenic | 35.0% | |
| ACTTATTTGAGCTCATCTAC+TGG | - | chr4_1:38032249-38032268 | None:intergenic | 35.0% | |
| !! | ACTGACCTTTATGATTTGGT+TGG | + | chr4_1:38032331-38032350 | Msa0546370:intron | 35.0% |
| !!! | ATGATTTGGTTGGTTTTTGC+AGG | + | chr4_1:38032341-38032360 | Msa0546370:intron | 35.0% |
| GAAGGAAGGATAGATGAAAA+TGG | + | chr4_1:38032363-38032382 | Msa0546370:CDS | 35.0% | |
| AACTTGCAGTGTTCTTATCA+TGG | + | chr4_1:38032387-38032406 | Msa0546370:CDS | 35.0% | |
| ACTTGCAGTGTTCTTATCAT+GGG | + | chr4_1:38032388-38032407 | Msa0546370:CDS | 35.0% | |
| GCTAAATACCCTAGTTATGT+TGG | + | chr4_1:38032784-38032803 | Msa0546370:intron | 35.0% | |
| !!! | TCTGGTTTTACTAAGTCATC+AGG | - | chr4_1:38032920-38032939 | None:intergenic | 35.0% |
| TGAGCAAAATCAATGTGAGA+AGG | - | chr4_1:38033013-38033032 | None:intergenic | 35.0% | |
| !!! | CATTGATTTTGCTCATCACA+AGG | + | chr4_1:38033018-38033037 | Msa0546370:CDS | 35.0% |
| TTTCTTAACCCGAAAAAGCA+CGG | - | chr4_1:38033297-38033316 | None:intergenic | 35.0% | |
| ! | GGTTTTCAGTGTCTTAGAAA+GGG | - | chr4_1:38033576-38033595 | None:intergenic | 35.0% |
| ! | TGGTTTTCAGTGTCTTAGAA+AGG | - | chr4_1:38033577-38033596 | None:intergenic | 35.0% |
| GGGTACTTATAAATTGGTAC+AGG | - | chr4_1:38033604-38033623 | None:intergenic | 35.0% | |
| TTTATAAGTACCCAAACACC+TGG | + | chr4_1:38033611-38033630 | Msa0546370:intron | 35.0% | |
| TTATAAGTACCCAAACACCT+GGG | + | chr4_1:38033612-38033631 | Msa0546370:intron | 35.0% | |
| !! | AATTTTGATCTCCTCTCCAT+AGG | + | chr4_1:38033879-38033898 | Msa0546370:intron | 35.0% |
| ! | TAAATTTGGAACTGATCCGT+GGG | - | chr4_1:38033993-38034012 | None:intergenic | 35.0% |
| ! | ATAAATTTGGAACTGATCCG+TGG | - | chr4_1:38033994-38034013 | None:intergenic | 35.0% |
| CCTCAATATTTGGATGATTG+CGG | + | chr4_1:38034211-38034230 | Msa0546370:intron | 35.0% | |
| AAGAAAACAGTGACAAGACT+AGG | - | chr4_1:38034301-38034320 | None:intergenic | 35.0% | |
| ACAGCGAATAATTTCTGTCA+AGG | - | chr4_1:38034627-38034646 | None:intergenic | 35.0% | |
| ! | GATTTTCTTGTTCATGTCTC+AGG | + | chr4_1:38034779-38034798 | Msa0546370:intron | 35.0% |
| TTCCTAGATGGTATGAACAT+TGG | + | chr4_1:38034805-38034824 | Msa0546370:CDS | 35.0% | |
| TGAACATTGGACTTCAAACA+AGG | + | chr4_1:38034818-38034837 | Msa0546370:CDS | 35.0% | |
| !! | TACCTGACGTTTTGATAGTA+CGG | - | chr4_1:38035060-38035079 | None:intergenic | 35.0% |
| ! | CTAAAGTGTTCAGCTTGTAA+AGG | + | chr4_1:38035211-38035230 | Msa0546370:CDS | 35.0% |
| ! | TGAACGTGTTATTACTCCTA+AGG | + | chr4_1:38035436-38035455 | Msa0546370:exon | 35.0% |
| TACACATATTAACGTACACG+TGG | - | chr4_1:38035510-38035529 | None:intergenic | 35.0% | |
| !!! | TATGTTTTTTTGGTAGTGGC+CGG | + | chr4_1:38035703-38035722 | Msa0546370:three_prime_UTR | 35.0% |
| GACAATGCATACTATATGCA+AGG | - | chr4_1:38035744-38035763 | None:intergenic | 35.0% | |
| ! | TGAGTTTTGCTCAGTTAGTA+TGG | - | chr4_1:38035766-38035785 | None:intergenic | 35.0% |
| GAACACTCTTCAAACTTGTG+TGG | - | chr4_1:38031155-38031174 | None:intergenic | 40.0% | |
| !!! | GCATTTTTGGTACTTCAGGA+CGG | + | chr4_1:38031213-38031232 | Msa0546370:intron | 40.0% |
| ACTTCAGGACGGAAAATTCT+TGG | + | chr4_1:38031224-38031243 | Msa0546370:intron | 40.0% | |
| CTTCAGGACGGAAAATTCTT+GGG | + | chr4_1:38031225-38031244 | Msa0546370:intron | 40.0% | |
| GTGGGATGTCATTCATTGAT+TGG | - | chr4_1:38031285-38031304 | None:intergenic | 40.0% | |
| ATGCACTCATGTGAAACTGT+TGG | + | chr4_1:38031813-38031832 | Msa0546370:intron | 40.0% | |
| !! | CATGTAGCGGTGTTACAAAA+TGG | - | chr4_1:38031893-38031912 | None:intergenic | 40.0% |
| TGCAATAAGCACATGTAGGT+AGG | - | chr4_1:38031938-38031957 | None:intergenic | 40.0% | |
| TGGATATGTCAGAATCACGA+TGG | + | chr4_1:38032088-38032107 | Msa0546370:intron | 40.0% | |
| TGACTTTGTAGAAGCAAGGT+GGG | - | chr4_1:38032114-38032133 | None:intergenic | 40.0% | |
| ACCTTGCTTCTACAAAGTCA+CGG | + | chr4_1:38032114-38032133 | Msa0546370:intron | 40.0% | |
| !!! | TTTGGTTGGTTTTTGCAGGA+AGG | + | chr4_1:38032345-38032364 | Msa0546370:intron | 40.0% |
| ! | TATCATGGGTGGTCTTTTGA+TGG | + | chr4_1:38032402-38032421 | Msa0546370:CDS | 40.0% |
| TTTGTTTGGCCTGATGAGAA+TGG | + | chr4_1:38032543-38032562 | Msa0546370:CDS | 40.0% | |
| TGTGCCTTTATTGATCTGCA+TGG | + | chr4_1:38032872-38032891 | Msa0546370:intron | 40.0% | |
| AGTAAAACCAGAGTTTGCGA+CGG | + | chr4_1:38032928-38032947 | Msa0546370:CDS | 40.0% | |
| ! | ATTCAGCGCGATCTTTTCTA+CGG | + | chr4_1:38032956-38032975 | Msa0546370:CDS | 40.0% |
| AACTTGACTTTATGGTGTGC+TGG | + | chr4_1:38033058-38033077 | Msa0546370:intron | 40.0% | |
| !! | TATCTAGGACCGTGCTTTTT+CGG | + | chr4_1:38033285-38033304 | Msa0546370:intron | 40.0% |
| TTAGTAAGTACCCGAGCATT+TGG | + | chr4_1:38033416-38033435 | Msa0546370:intron | 40.0% | |
| TAGTAAGTACCCGAGCATTT+GGG | + | chr4_1:38033417-38033436 | Msa0546370:intron | 40.0% | |
| TATAAGTACCCAAACACCTG+GGG | + | chr4_1:38033613-38033632 | Msa0546370:intron | 40.0% | |
| !!! | GTTGCTTGCATTTTTAGCCT+TGG | - | chr4_1:38033662-38033681 | None:intergenic | 40.0% |
| ATCGAGCATTCCATACTACT+GGG | + | chr4_1:38033693-38033712 | Msa0546370:intron | 40.0% | |
| AAATTCCTGTCCCAGTAGTA+TGG | - | chr4_1:38033706-38033725 | None:intergenic | 40.0% | |
| CTATCGACATAAGCAGTTGT+AGG | + | chr4_1:38033806-38033825 | Msa0546370:intron | 40.0% | |
| GAATCCATCTTGAATGGAAG+AGG | - | chr4_1:38033931-38033950 | None:intergenic | 40.0% | |
| !! | GCTTTTCAGGAGCTAATGAT+GGG | + | chr4_1:38033965-38033984 | Msa0546370:CDS | 40.0% |
| ! | AGGGCATCTACCTCAATATT+TGG | + | chr4_1:38034201-38034220 | Msa0546370:intron | 40.0% |
| CCGCAATCATCCAAATATTG+AGG | - | chr4_1:38034214-38034233 | None:intergenic | 40.0% | |
| TGAGCTTCAGAACCAACAAA+TGG | - | chr4_1:38034325-38034344 | None:intergenic | 40.0% | |
| GTGACCAGAAATGGGTAATA+TGG | + | chr4_1:38034401-38034420 | Msa0546370:CDS | 40.0% | |
| TCGAAATTTCTTCCAGCTCA+CGG | + | chr4_1:38034483-38034502 | Msa0546370:CDS | 40.0% | |
| TAGAAATCTTACTTGCCACC+AGG | - | chr4_1:38034521-38034540 | None:intergenic | 40.0% | |
| !!! | CGTGGTTTTATCGAAGAGAA+TGG | - | chr4_1:38034562-38034581 | None:intergenic | 40.0% |
| CTGTCAATGAAACATTCACG+TGG | - | chr4_1:38034580-38034599 | None:intergenic | 40.0% | |
| !! | AACCTCTAACATCGACTTCT+AGG | + | chr4_1:38034723-38034742 | Msa0546370:intron | 40.0% |
| ATCCTAGAAGTCGATGTTAG+AGG | - | chr4_1:38034728-38034747 | None:intergenic | 40.0% | |
| TTTCTTGTTCATGTCTCAGG+TGG | + | chr4_1:38034782-38034801 | Msa0546370:intron | 40.0% | |
| GTCCAATGTTCATACCATCT+AGG | - | chr4_1:38034810-38034829 | None:intergenic | 40.0% | |
| GGTGACATGATTGTACTTCA+AGG | + | chr4_1:38034849-38034868 | Msa0546370:CDS | 40.0% | |
| AAATGCCAACACAAAGCGAT+CGG | - | chr4_1:38034961-38034980 | None:intergenic | 40.0% | |
| TGGCATTTAGAAATTGGCTG+AGG | + | chr4_1:38034973-38034992 | Msa0546370:CDS | 40.0% | |
| !! | CGTTTTGATAGTACGGTTGA+AGG | - | chr4_1:38035053-38035072 | None:intergenic | 40.0% |
| AACCGTACTATCAAAACGTC+AGG | + | chr4_1:38035055-38035074 | Msa0546370:CDS | 40.0% | |
| AGCTTGTAAAGGAGCTTATG+AGG | + | chr4_1:38035222-38035241 | Msa0546370:CDS | 40.0% | |
| GCTTGTAAAGGAGCTTATGA+GGG | + | chr4_1:38035223-38035242 | Msa0546370:CDS | 40.0% | |
| CTTATGAGGGATTCCAAACA+TGG | + | chr4_1:38035236-38035255 | Msa0546370:CDS | 40.0% | |
| ! | TCAGGATTTTCTGCCATGTT+TGG | - | chr4_1:38035252-38035271 | None:intergenic | 40.0% |
| !!! | ATGTTTTTTTGGTAGTGGCC+GGG | + | chr4_1:38035704-38035723 | Msa0546370:three_prime_UTR | 40.0% |
| TGCATACTATATGCAAGGTC+CGG | - | chr4_1:38035739-38035758 | None:intergenic | 40.0% | |
| GGAAAATTCTTGGGTGGTCT+TGG | + | chr4_1:38031234-38031253 | Msa0546370:intron | 45.0% | |
| ! | CACAAGGAGATAGTCTTAGG+TGG | - | chr4_1:38031406-38031425 | None:intergenic | 45.0% |
| CACCTAAGACTATCTCCTTG+TGG | + | chr4_1:38031404-38031423 | Msa0546370:intron | 45.0% | |
| GTCCACAAGGAGATAGTCTT+AGG | - | chr4_1:38031409-38031428 | None:intergenic | 45.0% | |
| TGACACTACAAGCCATGGTT+TGG | - | chr4_1:38031537-38031556 | None:intergenic | 45.0% | |
| CAAGTCACAACCACAACTTG+CGG | - | chr4_1:38031841-38031860 | None:intergenic | 45.0% | |
| ! | AGTTGTGGTTGTGACTTGTG+AGG | + | chr4_1:38031843-38031862 | Msa0546370:intron | 45.0% |
| GTGACTTTGTAGAAGCAAGG+TGG | - | chr4_1:38032115-38032134 | None:intergenic | 45.0% | |
| ACCGTGACTTTGTAGAAGCA+AGG | - | chr4_1:38032118-38032137 | None:intergenic | 45.0% | |
| TGCTTCTACAAAGTCACGGT+AGG | + | chr4_1:38032118-38032137 | Msa0546370:intron | 45.0% | |
| !!! | GTTGGTTTTTGCAGGAAGGA+AGG | + | chr4_1:38032349-38032368 | Msa0546370:intron | 45.0% |
| TGCAGTGTTCTTATCATGGG+TGG | + | chr4_1:38032391-38032410 | Msa0546370:CDS | 45.0% | |
| AACCTAGTAGCACAAGCTCT+AGG | - | chr4_1:38032495-38032514 | None:intergenic | 45.0% | |
| TGCTACTAGGTTTCCTACCT+TGG | + | chr4_1:38032503-38032522 | Msa0546370:CDS | 45.0% | |
| !! | TTTCCTACCTTGGTGTCTCA+GGG | + | chr4_1:38032513-38032532 | Msa0546370:CDS | 45.0% |
| CTCAGGGATTGCTCTTTGTT+TGG | + | chr4_1:38032529-38032548 | Msa0546370:CDS | 45.0% | |
| TTTGGCCTGATGAGAATGGT+TGG | + | chr4_1:38032547-38032566 | Msa0546370:CDS | 45.0% | |
| TTGGCCTGATGAGAATGGTT+GGG | + | chr4_1:38032548-38032567 | Msa0546370:CDS | 45.0% | |
| TTCTCCCAACCATTCTCATC+AGG | - | chr4_1:38032555-38032574 | None:intergenic | 45.0% | |
| CTACGGCTATGATACTCTCA+TGG | + | chr4_1:38032973-38032992 | Msa0546370:CDS | 45.0% | |
| !!! | ATCTAGGACCGTGCTTTTTC+GGG | + | chr4_1:38033286-38033305 | Msa0546370:intron | 45.0% |
| AGTAAGTACCCGAGCATTTG+GGG | + | chr4_1:38033418-38033437 | Msa0546370:intron | 45.0% | |
| GCTCTCTACGATGCTTTACT+CGG | + | chr4_1:38033522-38033541 | Msa0546370:intron | 45.0% | |
| ATAAGTACCCAAACACCTGG+GGG | + | chr4_1:38033614-38033633 | Msa0546370:intron | 45.0% | |
| !! | GGTAGCTAGCTTTGAAGGAA+GGG | - | chr4_1:38033641-38033660 | None:intergenic | 45.0% |
| !! | TGGTAGCTAGCTTTGAAGGA+AGG | - | chr4_1:38033642-38033661 | None:intergenic | 45.0% |
| TCCTTCAAAGCTAGCTACCA+AGG | + | chr4_1:38033642-38033661 | Msa0546370:intron | 45.0% | |
| CAGTAGTATGGAATGCTCGA+TGG | - | chr4_1:38033694-38033713 | None:intergenic | 45.0% | |
| CATCGAGCATTCCATACTAC+TGG | + | chr4_1:38033692-38033711 | Msa0546370:intron | 45.0% | |
| ! | TGGGACAGGAATTTCCCTTT+TGG | + | chr4_1:38033712-38033731 | Msa0546370:intron | 45.0% |
| ATCTCCTCTCCATAGGTTAC+AGG | + | chr4_1:38033886-38033905 | Msa0546370:intron | 45.0% | |
| TCTCTCCTTCCTGTAACCTA+TGG | - | chr4_1:38033898-38033917 | None:intergenic | 45.0% | |
| CATCTTGAATGGAAGAGGCT+TGG | - | chr4_1:38033926-38033945 | None:intergenic | 45.0% | |
| CAAGCCTCTTCCATTCAAGA+TGG | + | chr4_1:38033924-38033943 | Msa0546370:CDS | 45.0% | |
| CCACGTGAATCCATCTTGAA+TGG | - | chr4_1:38033937-38033956 | None:intergenic | 45.0% | |
| ! | CCATTCAAGATGGATTCACG+TGG | + | chr4_1:38033934-38033953 | Msa0546370:CDS | 45.0% |
| ! | AGATGGATTCACGTGGTTCA+TGG | + | chr4_1:38033941-38033960 | Msa0546370:CDS | 45.0% |
| ! | GATGGATTCACGTGGTTCAT+GGG | + | chr4_1:38033942-38033961 | Msa0546370:CDS | 45.0% |
| ATGGATTCACGTGGTTCATG+GGG | + | chr4_1:38033943-38033962 | Msa0546370:CDS | 45.0% | |
| !! | GGCTTTTCAGGAGCTAATGA+TGG | + | chr4_1:38033964-38033983 | Msa0546370:CDS | 45.0% |
| ATGTTCCTTCAATGTCCCCA+TGG | + | chr4_1:38034426-38034445 | Msa0546370:CDS | 45.0% | |
| ! | ATTTCGAGCACTGCAAACGA+TGG | - | chr4_1:38034470-38034489 | None:intergenic | 45.0% |
| ! | CGTTAGGATTTGCTTGTTCC+TGG | - | chr4_1:38034760-38034779 | None:intergenic | 45.0% |
| TTTCTCGCAGAAACCGAGAA+TGG | + | chr4_1:38034885-38034904 | Msa0546370:CDS | 45.0% | |
| GTTAATGTCACCGCCATTCT+CGG | - | chr4_1:38034901-38034920 | None:intergenic | 45.0% | |
| AATGGCCAACCTGAATGGTT+CGG | + | chr4_1:38035005-38035024 | Msa0546370:CDS | 45.0% | |
| GATAGTACGGTTGAAGGCAA+TGG | - | chr4_1:38035047-38035066 | None:intergenic | 45.0% | |
| ACATGGCAGAAAATCCTGAC+TGG | + | chr4_1:38035253-38035272 | Msa0546370:CDS | 45.0% | |
| ! | TACTCAGCTGCGCATAGTTT+TGG | + | chr4_1:38035318-38035337 | Msa0546370:CDS | 45.0% |
| CATACTATATGCAAGGTCCG+GGG | - | chr4_1:38035737-38035756 | None:intergenic | 45.0% | |
| GCATACTATATGCAAGGTCC+GGG | - | chr4_1:38035738-38035757 | None:intergenic | 45.0% | |
| !! | ATATATAATTAATTAATCTT+TGG | - | chr4_1:38033184-38033203 | None:intergenic | 5.0% |
| !! | TGATTAAAAATTAATTAAAT+TGG | - | chr4_1:38033360-38033379 | None:intergenic | 5.0% |
| CAGGACGGAAAATTCTTGGG+TGG | + | chr4_1:38031228-38031247 | Msa0546370:intron | 50.0% | |
| AGACTATCTCCTTGTGGACC+AGG | + | chr4_1:38031410-38031429 | Msa0546370:intron | 50.0% | |
| GACTATCTCCTTGTGGACCA+GGG | + | chr4_1:38031411-38031430 | Msa0546370:intron | 50.0% | |
| ACTCGATACCTCCAAATCCC+TGG | - | chr4_1:38031431-38031450 | None:intergenic | 50.0% | |
| CAGTGGGAACAACCAAACCA+TGG | + | chr4_1:38031522-38031541 | Msa0546370:intron | 50.0% | |
| !! | TCACGGTAGGTCACTGATTC+TGG | + | chr4_1:38032131-38032150 | Msa0546370:intron | 50.0% |
| !! | TGGTCTTTTGATGGACGTGG+AGG | + | chr4_1:38032411-38032430 | Msa0546370:CDS | 50.0% |
| ! | CTCCTAGAGCTTGTGCTACT+AGG | + | chr4_1:38032490-38032509 | Msa0546370:CDS | 50.0% |
| !! | GTTTCCTACCTTGGTGTCTC+AGG | + | chr4_1:38032512-38032531 | Msa0546370:CDS | 50.0% |
| AATCCCTGAGACACCAAGGT+AGG | - | chr4_1:38032519-38032538 | None:intergenic | 50.0% | |
| ATGTTCACCGTCGCAAACTC+TGG | - | chr4_1:38032938-38032957 | None:intergenic | 50.0% | |
| ATCAGCTGTCATGGGATGCT+TGG | - | chr4_1:38033490-38033509 | None:intergenic | 50.0% | |
| TTTCCGATCAGTGCCTCCAT+AGG | + | chr4_1:38033547-38033566 | Msa0546370:intron | 50.0% | |
| TTCCGATCAGTGCCTCCATA+GGG | + | chr4_1:38033548-38033567 | Msa0546370:intron | 50.0% | |
| TTAGAAAGGGCTCCCTATGG+AGG | - | chr4_1:38033563-38033582 | None:intergenic | 50.0% | |
| GTCTTAGAAAGGGCTCCCTA+TGG | - | chr4_1:38033566-38033585 | None:intergenic | 50.0% | |
| !! | GCCTTGGTAGCTAGCTTTGA+AGG | - | chr4_1:38033646-38033665 | None:intergenic | 50.0% |
| GCATTCCATACTACTGGGAC+AGG | + | chr4_1:38033698-38033717 | Msa0546370:intron | 50.0% | |
| CCTTCCTGTAACCTATGGAG+AGG | - | chr4_1:38033893-38033912 | None:intergenic | 50.0% | |
| CCTCTCCATAGGTTACAGGA+AGG | + | chr4_1:38033890-38033909 | Msa0546370:intron | 50.0% | |
| ! | GAGCTAATGATGGGAACCCA+CGG | + | chr4_1:38033974-38033993 | Msa0546370:CDS | 50.0% |
| TACTTTCATGCAAAGGCCGC+TGG | - | chr4_1:38034046-38034065 | None:intergenic | 50.0% | |
| TGGATGATTGCGGCATCATG+CGG | + | chr4_1:38034221-38034240 | Msa0546370:intron | 50.0% | |
| !! | ATTTCTGGTCACCAACCACG+GGG | - | chr4_1:38034393-38034412 | None:intergenic | 50.0% |
| !! | CATTTCTGGTCACCAACCAC+GGG | - | chr4_1:38034394-38034413 | None:intergenic | 50.0% |
| !! | CCATTTCTGGTCACCAACCA+CGG | - | chr4_1:38034395-38034414 | None:intergenic | 50.0% |
| !! | CGTGGTTGGTGACCAGAAAT+GGG | + | chr4_1:38034393-38034412 | Msa0546370:CDS | 50.0% |
| AATCTTACTTGCCACCAGGC+AGG | - | chr4_1:38034517-38034536 | None:intergenic | 50.0% | |
| TGTCTCAGGTGGTTCCTAGA+TGG | + | chr4_1:38034793-38034812 | Msa0546370:intron | 50.0% | |
| AGAAATTGGCTGAGGCGACA+CGG | + | chr4_1:38034981-38035000 | Msa0546370:CDS | 50.0% | |
| TCTTGCCGAACCATTCAGGT+TGG | - | chr4_1:38035013-38035032 | None:intergenic | 50.0% | |
| ACACAACTGTTGCACCAGTC+AGG | - | chr4_1:38035270-38035289 | None:intergenic | 50.0% | |
| ! | GTTGTGTTTTGCGCGACTTC+TGG | + | chr4_1:38035283-38035302 | Msa0546370:CDS | 50.0% |
| ATGCGCAGCTGAGTATCTGA+TGG | - | chr4_1:38035313-38035332 | None:intergenic | 50.0% | |
| CTCCTTGTGGACCAGGGATT+TGG | + | chr4_1:38031417-38031436 | Msa0546370:intron | 55.0% | |
| CTCCAAATCCCTGGTCCACA+AGG | - | chr4_1:38031422-38031441 | None:intergenic | 55.0% | |
| CTTGTGGACCAGGGATTTGG+AGG | + | chr4_1:38031420-38031439 | Msa0546370:intron | 55.0% | |
| ACTGTTGGCACCGCAAGTTG+TGG | + | chr4_1:38031828-38031847 | Msa0546370:intron | 55.0% | |
| !! | GGGTGGTCTTTTGATGGACG+TGG | + | chr4_1:38032408-38032427 | Msa0546370:CDS | 55.0% |
| AGGTTGCACTGTGATCCCTC+AGG | + | chr4_1:38032431-38032450 | Msa0546370:CDS | 55.0% | |
| ATCCCTCAGGCTTCACCTGA+AGG | + | chr4_1:38032444-38032463 | Msa0546370:CDS | 55.0% | |
| GACCTTCAGGTGAAGCCTGA+GGG | - | chr4_1:38032449-38032468 | None:intergenic | 55.0% | |
| AGATCCAACAGCACGCGCTT+CGG | - | chr4_1:38032472-38032491 | None:intergenic | 55.0% | |
| GAGCAATCCCTGAGACACCA+AGG | - | chr4_1:38032523-38032542 | None:intergenic | 55.0% | |
| AGGAGGGTTCCCCAAATGCT+CGG | - | chr4_1:38033430-38033449 | None:intergenic | 55.0% | |
| ! | TGTCATGGGATGCTTGGTGG+TGG | - | chr4_1:38033484-38033503 | None:intergenic | 55.0% |
| AGCTGTCATGGGATGCTTGG+TGG | - | chr4_1:38033487-38033506 | None:intergenic | 55.0% | |
| GCTGGGACATCAGCTGTCAT+GGG | - | chr4_1:38033498-38033517 | None:intergenic | 55.0% | |
| CATGACAGCTGATGTCCCAG+CGG | + | chr4_1:38033497-38033516 | Msa0546370:intron | 55.0% | |
| !! | CTCCCTATGGAGGCACTGAT+CGG | - | chr4_1:38033553-38033572 | None:intergenic | 55.0% |
| ! | CGTGGTTCATGGGGCTTTTC+AGG | + | chr4_1:38033952-38033971 | Msa0546370:CDS | 55.0% |
| GATCGATACCAAACTCCCCG+TGG | + | chr4_1:38034375-38034394 | Msa0546370:CDS | 55.0% | |
| GATACCAAACTCCCCGTGGT+TGG | + | chr4_1:38034379-38034398 | Msa0546370:CDS | 55.0% | |
| !! | CCGTGGTTGGTGACCAGAAA+TGG | + | chr4_1:38034392-38034411 | Msa0546370:CDS | 55.0% |
| ! | AGGTGCCATGGGGACATTGA+AGG | - | chr4_1:38034434-38034453 | None:intergenic | 55.0% |
| TTCAATGTCCCCATGGCACC+TGG | + | chr4_1:38034433-38034452 | Msa0546370:CDS | 55.0% | |
| ! | GAGTCTTACCAGGTGCCATG+GGG | - | chr4_1:38034444-38034463 | None:intergenic | 55.0% |
| ! | CGAGTCTTACCAGGTGCCAT+GGG | - | chr4_1:38034445-38034464 | None:intergenic | 55.0% |
| ACGATGGAGCGAGTCTTACC+AGG | - | chr4_1:38034454-38034473 | None:intergenic | 55.0% | |
| CTCGCAGAAACCGAGAATGG+CGG | + | chr4_1:38034888-38034907 | Msa0546370:CDS | 55.0% | |
| ! | CCTGTGTTGGTGTGAAGGTG+AGG | - | chr4_1:38034938-38034957 | None:intergenic | 55.0% |
| CCTCACCTTCACACCAACAC+AGG | + | chr4_1:38034935-38034954 | Msa0546370:CDS | 55.0% | |
| ! | ATCGGCCTGTGTTGGTGTGA+AGG | - | chr4_1:38034943-38034962 | None:intergenic | 55.0% |
| ACAAAGCGATCGGCCTGTGT+TGG | - | chr4_1:38034951-38034970 | None:intergenic | 55.0% | |
| ACAGGCCGATCGCTTTGTGT+TGG | + | chr4_1:38034953-38034972 | Msa0546370:CDS | 55.0% | |
| ACGGCAATGGCCAACCTGAA+TGG | + | chr4_1:38035000-38035019 | Msa0546370:CDS | 55.0% | |
| CTGCTCTTGCCGAACCATTC+AGG | - | chr4_1:38035017-38035036 | None:intergenic | 55.0% | |
| GTACGGTTGAAGGCAATGGC+TGG | - | chr4_1:38035043-38035062 | None:intergenic | 55.0% | |
| GGACCTTCAGGTGAAGCCTG+AGG | - | chr4_1:38032450-38032469 | None:intergenic | 60.0% | |
| GATCCAACAGCACGCGCTTC+GGG | - | chr4_1:38032471-38032490 | None:intergenic | 60.0% | |
| GGAGGGTTCCCCAAATGCTC+GGG | - | chr4_1:38033429-38033448 | None:intergenic | 60.0% | |
| CGCTGGGACATCAGCTGTCA+TGG | - | chr4_1:38033499-38033518 | None:intergenic | 60.0% | |
| CATCGTAGAGAGCAGCCGCT+GGG | - | chr4_1:38033515-38033534 | None:intergenic | 60.0% | |
| GAAGGGTCCCCCAGGTGTTT+GGG | - | chr4_1:38033624-38033643 | None:intergenic | 60.0% | |
| ! | CTTTGAAGGAAGGGTCCCCC+AGG | - | chr4_1:38033632-38033651 | None:intergenic | 60.0% |
| GTCACCAACCACGGGGAGTT+TGG | - | chr4_1:38034386-38034405 | None:intergenic | 60.0% | |
| GCGAGTCTTACCAGGTGCCA+TGG | - | chr4_1:38034446-38034465 | None:intergenic | 60.0% | |
| TTCTTCCAGCTCACGGTGCC+AGG | + | chr4_1:38034490-38034509 | Msa0546370:CDS | 60.0% | |
| ! | TCTTCCAGCTCACGGTGCCA+GGG | + | chr4_1:38034491-38034510 | Msa0546370:CDS | 60.0% |
| AAGGTCCGGGGTTCGAATCC+CGG | - | chr4_1:38035725-38035744 | None:intergenic | 60.0% | |
| GCATCGTAGAGAGCAGCCGC+TGG | - | chr4_1:38033516-38033535 | None:intergenic | 65.0% | |
| GGAAGGGTCCCCCAGGTGTT+TGG | - | chr4_1:38033625-38033644 | None:intergenic | 65.0% | |
| TGGCTGAGGCGACACGGCAA+TGG | + | chr4_1:38034987-38035006 | Msa0546370:CDS | 65.0% | |
| AGTGGCCGGGATTCGAACCC+CGG | + | chr4_1:38035717-38035736 | Msa0546370:three_prime_UTR | 65.0% | |
| GCACGCGCTTCGGGACCTTC+AGG | - | chr4_1:38032462-38032481 | None:intergenic | 70.0% | |
| GGTCCCGAAGCGCGTGCTGT+TGG | + | chr4_1:38032465-38032484 | Msa0546370:CDS | 70.0% | |
| ACTTGCCACCAGGCAGGCCC+TGG | - | chr4_1:38034511-38034530 | None:intergenic | 70.0% | |
| CAGGCCCTGGCACCGTGAGC+TGG | - | chr4_1:38034498-38034517 | None:intergenic | 75.0% | |
| ! | TCACGGTGCCAGGGCCTGCC+TGG | + | chr4_1:38034500-38034519 | Msa0546370:CDS | 75.0% |
| !! | CGGTGCCAGGGCCTGCCTGG+TGG | + | chr4_1:38034503-38034522 | Msa0546370:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 38031131 | 38035786 | 38031131 | ID=Msa0546370;Name=Msa0546370 |
| chr4_1 | mRNA | 38031131 | 38035786 | 38031131 | ID=Msa0546370-mRNA-1;Parent=Msa0546370;Name=Msa0546370-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.83|0.85|0.85|1|1|7|348|412 |
| chr4_1 | exon | 38031131 | 38031178 | 38031131 | ID=Msa0546370-mRNA-1:exon:9697;Parent=Msa0546370-mRNA-1 |
| chr4_1 | exon | 38032363 | 38032598 | 38032363 | ID=Msa0546370-mRNA-1:exon:9698;Parent=Msa0546370-mRNA-1 |
| chr4_1 | exon | 38032913 | 38033039 | 38032913 | ID=Msa0546370-mRNA-1:exon:9699;Parent=Msa0546370-mRNA-1 |
| chr4_1 | exon | 38033901 | 38034037 | 38033901 | ID=Msa0546370-mRNA-1:exon:9700;Parent=Msa0546370-mRNA-1 |
| chr4_1 | exon | 38034369 | 38034528 | 38034369 | ID=Msa0546370-mRNA-1:exon:9701;Parent=Msa0546370-mRNA-1 |
| chr4_1 | exon | 38034801 | 38035076 | 38034801 | ID=Msa0546370-mRNA-1:exon:9702;Parent=Msa0546370-mRNA-1 |
| chr4_1 | exon | 38035184 | 38035786 | 38035184 | ID=Msa0546370-mRNA-1:exon:9703;Parent=Msa0546370-mRNA-1 |
| chr4_1 | CDS | 38031131 | 38031178 | 38031131 | ID=Msa0546370-mRNA-1:cds;Parent=Msa0546370-mRNA-1 |
| chr4_1 | CDS | 38032363 | 38032598 | 38032363 | ID=Msa0546370-mRNA-1:cds;Parent=Msa0546370-mRNA-1 |
| chr4_1 | CDS | 38032913 | 38033039 | 38032913 | ID=Msa0546370-mRNA-1:cds;Parent=Msa0546370-mRNA-1 |
| chr4_1 | CDS | 38033901 | 38034037 | 38033901 | ID=Msa0546370-mRNA-1:cds;Parent=Msa0546370-mRNA-1 |
| chr4_1 | CDS | 38034369 | 38034528 | 38034369 | ID=Msa0546370-mRNA-1:cds;Parent=Msa0546370-mRNA-1 |
| chr4_1 | CDS | 38034801 | 38035076 | 38034801 | ID=Msa0546370-mRNA-1:cds;Parent=Msa0546370-mRNA-1 |
| chr4_1 | CDS | 38035184 | 38035438 | 38035184 | ID=Msa0546370-mRNA-1:cds;Parent=Msa0546370-mRNA-1 |
| chr4_1 | three_prime_UTR | 38035439 | 38035786 | 38035439 | ID=Msa0546370-mRNA-1:three_prime_utr;Parent=Msa0546370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
