Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0364010 | XP_003600478.1 | 99.552 | 223 | 1 | 0 | 1 | 223 | 1 | 223 | 1.12e-165 | 466 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0364010 | sp|Q8L9X2|RBCX2_ARATH | 54.091 | 220 | 82 | 3 | 1 | 219 | 1 | 202 | 1.07e-80 | 243 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0364010 | G7J266 | 99.552 | 223 | 1 | 0 | 1 | 223 | 1 | 223 | 5.35e-166 | 466 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0005630 | Msa0364010 | 0.827601 | 1.429527e-54 | -8.615850e-47 |
Msa0016830 | Msa0364010 | 0.826524 | 2.587234e-54 | -8.615850e-47 |
Msa0021980 | Msa0364010 | 0.803126 | 4.044625e-49 | -8.615850e-47 |
Msa0028280 | Msa0364010 | 0.815748 | 7.887678e-52 | -8.615850e-47 |
Msa0032450 | Msa0364010 | 0.813134 | 2.985494e-51 | -8.615850e-47 |
Msa0039200 | Msa0364010 | 0.819088 | 1.395164e-52 | -8.615850e-47 |
Msa0040090 | Msa0364010 | 0.813376 | 2.641815e-51 | -8.615850e-47 |
Msa0057740 | Msa0364010 | 0.804802 | 1.813446e-49 | -8.615850e-47 |
Msa0059880 | Msa0364010 | -0.808946 | 2.412344e-50 | -8.615850e-47 |
Msa0065190 | Msa0364010 | 0.861500 | 9.820807e-64 | -8.615850e-47 |
Msa0085580 | Msa0364010 | 0.808938 | 2.421334e-50 | -8.615850e-47 |
Msa0086820 | Msa0364010 | 0.819891 | 9.153678e-53 | -8.615850e-47 |
Msa0087580 | Msa0364010 | 0.801555 | 8.521823e-49 | -8.615850e-47 |
Msa0087780 | Msa0364010 | 0.802647 | 5.079052e-49 | -8.615850e-47 |
Msa0087790 | Msa0364010 | 0.808028 | 3.787632e-50 | -8.615850e-47 |
Msa0096570 | Msa0364010 | 0.834213 | 3.412289e-56 | -8.615850e-47 |
Msa0103060 | Msa0364010 | 0.801569 | 8.462922e-49 | -8.615850e-47 |
Msa0110500 | Msa0364010 | 0.841415 | 4.817642e-58 | -8.615850e-47 |
Msa0117300 | Msa0364010 | 0.821330 | 4.275787e-53 | -8.615850e-47 |
Msa0131090 | Msa0364010 | 0.803610 | 3.210703e-49 | -8.615850e-47 |
Msa0132920 | Msa0364010 | 0.807513 | 4.873853e-50 | -8.615850e-47 |
Msa0133670 | Msa0364010 | 0.817759 | 2.791366e-52 | -8.615850e-47 |
Msa0133880 | Msa0364010 | 0.819175 | 1.332992e-52 | -8.615850e-47 |
Msa0134300 | Msa0364010 | 0.801145 | 1.033865e-48 | -8.615850e-47 |
Msa0134380 | Msa0364010 | 0.816038 | 6.793516e-52 | -8.615850e-47 |
Msa0134420 | Msa0364010 | 0.809949 | 1.469324e-50 | -8.615850e-47 |
Msa0137010 | Msa0364010 | 0.806072 | 9.825204e-50 | -8.615850e-47 |
Msa0150910 | Msa0364010 | -0.802887 | 4.532282e-49 | -8.615850e-47 |
Msa0156780 | Msa0364010 | 0.835898 | 1.283330e-56 | -8.615850e-47 |
Msa0160650 | Msa0364010 | 0.807104 | 5.949456e-50 | -8.615850e-47 |
Msa0163340 | Msa0364010 | -0.800771 | 1.232498e-48 | -8.615850e-47 |
Msa0175480 | Msa0364010 | 0.804875 | 1.750826e-49 | -8.615850e-47 |
Msa0180600 | Msa0364010 | 0.810544 | 1.093711e-50 | -8.615850e-47 |
Msa0184030 | Msa0364010 | 0.806669 | 7.353601e-50 | -8.615850e-47 |
Msa0184120 | Msa0364010 | 0.824289 | 8.750417e-54 | -8.615850e-47 |
Msa0188500 | Msa0364010 | 0.854539 | 1.150806e-61 | -8.615850e-47 |
Msa0197600 | Msa0364010 | 0.814309 | 1.645268e-51 | -8.615850e-47 |
Msa0216010 | Msa0364010 | 0.819468 | 1.143003e-52 | -8.615850e-47 |
Msa0218430 | Msa0364010 | 0.806722 | 7.166171e-50 | -8.615850e-47 |
Msa0218480 | Msa0364010 | 0.809193 | 2.135822e-50 | -8.615850e-47 |
Msa0218590 | Msa0364010 | 0.807151 | 5.814231e-50 | -8.615850e-47 |
Msa0221460 | Msa0364010 | 0.800835 | 1.196205e-48 | -8.615850e-47 |
Msa0222720 | Msa0364010 | 0.812992 | 3.206463e-51 | -8.615850e-47 |
Msa0223190 | Msa0364010 | 0.840403 | 8.882631e-58 | -8.615850e-47 |
Msa0227290 | Msa0364010 | 0.803485 | 3.408328e-49 | -8.615850e-47 |
Msa0229750 | Msa0364010 | 0.827970 | 1.165448e-54 | -8.615850e-47 |
Msa0230980 | Msa0364010 | 0.855196 | 7.417598e-62 | -8.615850e-47 |
Msa0240290 | Msa0364010 | 0.816218 | 6.193587e-52 | -8.615850e-47 |
Msa0244820 | Msa0364010 | 0.803533 | 3.330691e-49 | -8.615850e-47 |
Msa0256170 | Msa0364010 | 0.814365 | 1.598651e-51 | -8.615850e-47 |
Msa0264020 | Msa0364010 | 0.815009 | 1.151165e-51 | -8.615850e-47 |
Msa0264240 | Msa0364010 | 0.822748 | 2.006311e-53 | -8.615850e-47 |
Msa0264420 | Msa0364010 | 0.837591 | 4.747832e-57 | -8.615850e-47 |
Msa0270460 | Msa0364010 | 0.855737 | 5.161776e-62 | -8.615850e-47 |
Msa0278080 | Msa0364010 | 0.802698 | 4.958711e-49 | -8.615850e-47 |
Msa0282880 | Msa0364010 | 0.806546 | 7.806943e-50 | -8.615850e-47 |
Msa0302310 | Msa0364010 | 0.841251 | 5.320369e-58 | -8.615850e-47 |
Msa0309060 | Msa0364010 | 0.820733 | 5.867476e-53 | -8.615850e-47 |
Msa0316720 | Msa0364010 | 0.801153 | 1.029644e-48 | -8.615850e-47 |
Msa0317630 | Msa0364010 | 0.820842 | 5.538803e-53 | -8.615850e-47 |
Msa0329060 | Msa0364010 | 0.819328 | 1.230465e-52 | -8.615850e-47 |
Msa0337760 | Msa0364010 | 0.803366 | 3.607227e-49 | -8.615850e-47 |
Msa0338900 | Msa0364010 | 0.804782 | 1.830705e-49 | -8.615850e-47 |
Msa0339560 | Msa0364010 | 0.824890 | 6.316446e-54 | -8.615850e-47 |
Msa0339670 | Msa0364010 | 0.837696 | 4.463492e-57 | -8.615850e-47 |
Msa0343990 | Msa0364010 | 0.830786 | 2.413115e-55 | -8.615850e-47 |
Msa0352640 | Msa0364010 | 0.837105 | 6.323791e-57 | -8.615850e-47 |
Msa0358720 | Msa0364010 | 0.800007 | 1.763636e-48 | -8.615850e-47 |
Msa0364010 | Msa0369430 | 0.805427 | 1.342088e-49 | -8.615850e-47 |
Msa0364010 | Msa0369750 | 0.810098 | 1.364535e-50 | -8.615850e-47 |
Msa0364010 | Msa0372990 | 0.823576 | 1.286185e-53 | -8.615850e-47 |
Msa0364010 | Msa0375930 | 0.811863 | 5.660044e-51 | -8.615850e-47 |
Msa0364010 | Msa0379500 | 0.817568 | 3.081754e-52 | -8.615850e-47 |
Msa0364010 | Msa0381370 | 0.814236 | 1.707586e-51 | -8.615850e-47 |
Msa0364010 | Msa0387740 | 0.819669 | 1.028643e-52 | -8.615850e-47 |
Msa0364010 | Msa0401570 | 0.812909 | 3.343267e-51 | -8.615850e-47 |
Msa0364010 | Msa0403720 | 0.871237 | 7.965710e-67 | -8.615850e-47 |
Msa0364010 | Msa0404180 | 0.851009 | 1.173174e-60 | -8.615850e-47 |
Msa0364010 | Msa0422520 | 0.811812 | 5.804083e-51 | -8.615850e-47 |
Msa0364010 | Msa0424570 | 0.811318 | 7.433109e-51 | -8.615850e-47 |
Msa0364010 | Msa0426680 | 0.817643 | 2.964724e-52 | -8.615850e-47 |
Msa0364010 | Msa0426860 | 0.813455 | 2.537616e-51 | -8.615850e-47 |
Msa0364010 | Msa0431940 | 0.827070 | 1.916788e-54 | -8.615850e-47 |
Msa0364010 | Msa0436590 | 0.827412 | 1.587218e-54 | -8.615850e-47 |
Msa0364010 | Msa0436600 | 0.831090 | 2.032838e-55 | -8.615850e-47 |
Msa0364010 | Msa0436610 | 0.822149 | 2.764750e-53 | -8.615850e-47 |
Msa0364010 | Msa0448400 | 0.828179 | 1.037877e-54 | -8.615850e-47 |
Msa0364010 | Msa0453310 | 0.800552 | 1.366065e-48 | -8.615850e-47 |
Msa0364010 | Msa0456480 | 0.866716 | 2.326988e-65 | -8.615850e-47 |
Msa0364010 | Msa0459080 | 0.810763 | 9.803278e-51 | -8.615850e-47 |
Msa0364010 | Msa0463960 | 0.804558 | 2.039094e-49 | -8.615850e-47 |
Msa0364010 | Msa0465640 | 0.875018 | 4.287175e-68 | -8.615850e-47 |
Msa0364010 | Msa0472870 | 0.805365 | 1.382519e-49 | -8.615850e-47 |
Msa0364010 | Msa0475360 | 0.831921 | 1.268926e-55 | -8.615850e-47 |
Msa0364010 | Msa0496460 | 0.822333 | 2.505836e-53 | -8.615850e-47 |
Msa0364010 | Msa0496470 | 0.825509 | 4.508879e-54 | -8.615850e-47 |
Msa0364010 | Msa0496570 | 0.804150 | 2.480406e-49 | -8.615850e-47 |
Msa0364010 | Msa0501350 | 0.803397 | 3.554232e-49 | -8.615850e-47 |
Msa0364010 | Msa0509510 | 0.825832 | 3.779536e-54 | -8.615850e-47 |
Msa0364010 | Msa0516000 | 0.811732 | 6.044127e-51 | -8.615850e-47 |
Msa0364010 | Msa0520810 | 0.856800 | 2.518414e-62 | -8.615850e-47 |
Msa0364010 | Msa0535570 | -0.802136 | 6.473949e-49 | -8.615850e-47 |
Msa0364010 | Msa0539400 | 0.800588 | 1.343292e-48 | -8.615850e-47 |
Msa0364010 | Msa0546370 | 0.828693 | 7.800312e-55 | -8.615850e-47 |
Msa0364010 | Msa0549330 | 0.848332 | 6.557605e-60 | -8.615850e-47 |
Msa0364010 | Msa0560370 | 0.812736 | 3.648291e-51 | -8.615850e-47 |
Msa0364010 | Msa0568490 | 0.818791 | 1.629925e-52 | -8.615850e-47 |
Msa0364010 | Msa0569630 | 0.820392 | 7.027247e-53 | -8.615850e-47 |
Msa0364010 | Msa0580540 | 0.807414 | 5.112968e-50 | -8.615850e-47 |
Msa0364010 | Msa0587070 | 0.812819 | 3.499667e-51 | -8.615850e-47 |
Msa0364010 | Msa0591490 | -0.800062 | 1.719055e-48 | -8.615850e-47 |
Msa0364010 | Msa0595240 | 0.811587 | 6.498025e-51 | -8.615850e-47 |
Msa0364010 | Msa0595470 | 0.801957 | 7.046100e-49 | -8.615850e-47 |
Msa0364010 | Msa0604640 | 0.843710 | 1.185227e-58 | -8.615850e-47 |
Msa0364010 | Msa0606680 | 0.809698 | 1.663459e-50 | -8.615850e-47 |
Msa0364010 | Msa0608940 | 0.812063 | 5.118581e-51 | -8.615850e-47 |
Msa0364010 | Msa0623360 | 0.867242 | 1.580798e-65 | -8.615850e-47 |
Msa0364010 | Msa0630850 | 0.841253 | 5.316313e-58 | -8.615850e-47 |
Msa0364010 | Msa0635350 | 0.802012 | 6.864031e-49 | -8.615850e-47 |
Msa0364010 | Msa0638040 | 0.809369 | 1.958135e-50 | -8.615850e-47 |
Msa0364010 | Msa0649530 | 0.804140 | 2.492409e-49 | -8.615850e-47 |
Msa0364010 | Msa0672350 | 0.806766 | 7.013152e-50 | -8.615850e-47 |
Msa0364010 | Msa0677110 | 0.804342 | 2.261931e-49 | -8.615850e-47 |
Msa0364010 | Msa0679780 | 0.809992 | 1.438188e-50 | -8.615850e-47 |
Msa0364010 | Msa0681880 | 0.859914 | 2.973085e-63 | -8.615850e-47 |
Msa0364010 | Msa0685390 | 0.816854 | 4.461339e-52 | -8.615850e-47 |
Msa0364010 | Msa0698900 | 0.803235 | 3.839702e-49 | -8.615850e-47 |
Msa0364010 | Msa0704780 | 0.843027 | 1.803025e-58 | -8.615850e-47 |
Msa0364010 | Msa0705050 | 0.829961 | 3.838869e-55 | -8.615850e-47 |
Msa0364010 | Msa0705130 | 0.823916 | 1.070443e-53 | -8.615850e-47 |
Msa0364010 | Msa0713530 | 0.817954 | 2.522048e-52 | -8.615850e-47 |
Msa0364010 | Msa0714060 | 0.823625 | 1.252344e-53 | -8.615850e-47 |
Msa0364010 | Msa0714200 | 0.826093 | 3.276935e-54 | -8.615850e-47 |
Msa0364010 | Msa0729120 | 0.807791 | 4.253613e-50 | -8.615850e-47 |
Msa0364010 | Msa0729590 | 0.804751 | 1.859043e-49 | -8.615850e-47 |
Msa0364010 | Msa0729780 | 0.867207 | 1.621977e-65 | -8.615850e-47 |
Msa0364010 | Msa0734190 | 0.830152 | 3.449530e-55 | -8.615850e-47 |
Msa0364010 | Msa0736930 | 0.816276 | 6.010194e-52 | -8.615850e-47 |
Msa0364010 | Msa0741600 | 0.822421 | 2.389923e-53 | -8.615850e-47 |
Msa0364010 | Msa0743280 | 0.827610 | 1.422577e-54 | -8.615850e-47 |
Msa0364010 | Msa0748050 | 0.814049 | 1.877705e-51 | -8.615850e-47 |
Msa0364010 | Msa0750590 | 0.809526 | 1.811971e-50 | -8.615850e-47 |
Msa0364010 | Msa0754790 | 0.861906 | 7.377965e-64 | -8.615850e-47 |
Msa0364010 | Msa0754840 | 0.841890 | 3.610456e-58 | -8.615850e-47 |
Msa0364010 | Msa0755590 | 0.824231 | 9.030971e-54 | -8.615850e-47 |
Msa0364010 | Msa0756410 | 0.813869 | 2.056919e-51 | -8.615850e-47 |
Msa0364010 | Msa0756440 | 0.840434 | 8.715820e-58 | -8.615850e-47 |
Msa0364010 | Msa0766880 | 0.811464 | 6.911667e-51 | -8.615850e-47 |
Msa0364010 | Msa0770020 | 0.882532 | 9.623984e-71 | -8.615850e-47 |
Msa0364010 | Msa0772040 | 0.808023 | 3.797230e-50 | -8.615850e-47 |
Msa0364010 | Msa0773290 | 0.820721 | 5.905808e-53 | -8.615850e-47 |
Msa0364010 | Msa0775420 | 0.810136 | 1.339488e-50 | -8.615850e-47 |
Msa0364010 | Msa0782030 | 0.833109 | 6.442636e-56 | -8.615850e-47 |
Msa0364010 | Msa0796460 | 0.818656 | 1.748825e-52 | -8.615850e-47 |
Msa0364010 | Msa0796610 | 0.825644 | 4.188844e-54 | -8.615850e-47 |
Msa0364010 | Msa0797240 | 0.836179 | 1.088913e-56 | -8.615850e-47 |
Msa0364010 | Msa0807980 | 0.800810 | 1.210310e-48 | -8.615850e-47 |
Msa0364010 | Msa0810590 | 0.814003 | 1.921829e-51 | -8.615850e-47 |
Msa0364010 | Msa0812800 | 0.809049 | 2.292912e-50 | -8.615850e-47 |
Msa0364010 | Msa0813630 | 0.815426 | 9.301808e-52 | -8.615850e-47 |
Msa0364010 | Msa0819670 | 0.816422 | 5.577061e-52 | -8.615850e-47 |
Msa0364010 | Msa0822370 | 0.808934 | 2.426949e-50 | -8.615850e-47 |
Msa0364010 | Msa0833910 | 0.823102 | 1.659133e-53 | -8.615850e-47 |
Msa0364010 | Msa0834160 | 0.826884 | 2.122926e-54 | -8.615850e-47 |
Msa0364010 | Msa0834200 | 0.842889 | 1.962788e-58 | -8.615850e-47 |
Msa0364010 | Msa0834240 | 0.833993 | 3.874931e-56 | -8.615850e-47 |
Msa0364010 | Msa0835010 | 0.812446 | 4.223087e-51 | -8.615850e-47 |
Msa0364010 | Msa0835550 | 0.841681 | 4.100354e-58 | -8.615850e-47 |
Msa0364010 | Msa0848780 | 0.859566 | 3.785916e-63 | -8.615850e-47 |
Msa0364010 | Msa0848980 | 0.835274 | 1.846206e-56 | -8.615850e-47 |
Msa0364010 | Msa0850520 | 0.816787 | 4.617876e-52 | -8.615850e-47 |
Msa0364010 | Msa0859950 | 0.851556 | 8.219501e-61 | -8.615850e-47 |
Msa0364010 | Msa0861800 | 0.809046 | 2.296182e-50 | -8.615850e-47 |
Msa0364010 | Msa0863470 | 0.824179 | 9.285105e-54 | -8.615850e-47 |
Msa0364010 | Msa0866310 | 0.805302 | 1.425315e-49 | -8.615850e-47 |
Msa0364010 | Msa0866510 | 0.827870 | 1.232344e-54 | -8.615850e-47 |
Msa0364010 | Msa0871310 | 0.805159 | 1.527236e-49 | -8.615850e-47 |
Msa0364010 | Msa0896920 | -0.835405 | 1.710215e-56 | -8.615850e-47 |
Msa0364010 | Msa0897390 | 0.821445 | 4.022495e-53 | -8.615850e-47 |
Msa0364010 | Msa0899080 | 0.830850 | 2.327374e-55 | -8.615850e-47 |
Msa0364010 | Msa0927890 | 0.818975 | 1.480393e-52 | -8.615850e-47 |
Msa0364010 | Msa0946300 | 0.812742 | 3.637944e-51 | -8.615850e-47 |
Msa0364010 | Msa0950410 | 0.819346 | 1.218563e-52 | -8.615850e-47 |
Msa0364010 | Msa0967250 | 0.821684 | 3.541388e-53 | -8.615850e-47 |
Msa0364010 | Msa0967260 | 0.829395 | 5.273954e-55 | -8.615850e-47 |
Msa0364010 | Msa0968240 | 0.803791 | 2.944971e-49 | -8.615850e-47 |
Msa0364010 | Msa0984820 | 0.803477 | 3.422142e-49 | -8.615850e-47 |
Msa0364010 | Msa0986560 | 0.814411 | 1.561839e-51 | -8.615850e-47 |
Msa0364010 | Msa0995660 | 0.805728 | 1.160622e-49 | -8.615850e-47 |
Msa0364010 | Msa0998940 | 0.808738 | 2.671956e-50 | -8.615850e-47 |
Msa0364010 | Msa0999590 | 0.812761 | 3.603466e-51 | -8.615850e-47 |
Msa0364010 | Msa1014120 | 0.811203 | 7.874245e-51 | -8.615850e-47 |
Msa0364010 | Msa1031220 | 0.801989 | 6.939839e-49 | -8.615850e-47 |
Msa0364010 | Msa1031530 | 0.804618 | 1.981029e-49 | -8.615850e-47 |
Msa0364010 | Msa1033230 | 0.825222 | 5.272639e-54 | -8.615850e-47 |
Msa0364010 | Msa1036020 | -0.822510 | 2.278771e-53 | -8.615850e-47 |
Msa0364010 | Msa1038110 | 0.804864 | 1.760401e-49 | -8.615850e-47 |
Msa0364010 | Msa1041550 | 0.847641 | 1.017079e-59 | -8.615850e-47 |
Msa0364010 | Msa1049440 | 0.813012 | 3.174073e-51 | -8.615850e-47 |
Msa0364010 | Msa1061670 | -0.810859 | 9.347009e-51 | -8.615850e-47 |
Msa0364010 | Msa1069440 | 0.814862 | 1.241367e-51 | -8.615850e-47 |
Msa0364010 | Msa1072640 | 0.822739 | 2.016719e-53 | -8.615850e-47 |
Msa0364010 | Msa1072770 | 0.855866 | 4.730396e-62 | -8.615850e-47 |
Msa0364010 | Msa1079610 | 0.835853 | 1.317650e-56 | -8.615850e-47 |
Msa0364010 | Msa1081530 | 0.851386 | 9.178639e-61 | -8.615850e-47 |
Msa0364010 | Msa1088740 | 0.803132 | 4.033382e-49 | -8.615850e-47 |
Msa0364010 | Msa1101610 | 0.824715 | 6.947778e-54 | -8.615850e-47 |
Msa0364010 | Msa1102180 | 0.828623 | 8.111434e-55 | -8.615850e-47 |
Msa0364010 | Msa1106960 | -0.801123 | 1.044471e-48 | -8.615850e-47 |
Msa0364010 | Msa1108530 | 0.802438 | 5.609825e-49 | -8.615850e-47 |
Msa0364010 | Msa1109880 | -0.805291 | 1.433178e-49 | -8.615850e-47 |
Msa0364010 | Msa1121580 | 0.805191 | 1.503974e-49 | -8.615850e-47 |
Msa0364010 | Msa1122480 | 0.834716 | 2.551856e-56 | -8.615850e-47 |
Msa0364010 | Msa1123340 | 0.800245 | 1.577392e-48 | -8.615850e-47 |
Msa0364010 | Msa1124440 | 0.864023 | 1.637767e-64 | -8.615850e-47 |
Msa0364010 | Msa1129660 | 0.832696 | 8.158832e-56 | -8.615850e-47 |
Msa0364010 | Msa1147600 | 0.803442 | 3.479248e-49 | -8.615850e-47 |
Msa0364010 | Msa1152500 | 0.818649 | 1.756020e-52 | -8.615850e-47 |
Msa0364010 | Msa1154770 | 0.803118 | 4.059776e-49 | -8.615850e-47 |
Msa0364010 | Msa1161120 | 0.831351 | 1.753554e-55 | -8.615850e-47 |
Msa0364010 | Msa1166450 | 0.836226 | 1.059579e-56 | -8.615850e-47 |
Msa0364010 | Msa1168130 | 0.840402 | 8.885140e-58 | -8.615850e-47 |
Msa0364010 | Msa1182530 | 0.819380 | 1.197257e-52 | -8.615850e-47 |
Msa0364010 | Msa1182960 | 0.808830 | 2.553692e-50 | -8.615850e-47 |
Msa0364010 | Msa1186010 | 0.806024 | 1.005567e-49 | -8.615850e-47 |
Msa0364010 | Msa1187810 | 0.804748 | 1.861031e-49 | -8.615850e-47 |
Msa0364010 | Msa1188820 | 0.810786 | 9.693671e-51 | -8.615850e-47 |
Msa0364010 | Msa1190090 | -0.816723 | 4.773625e-52 | -8.615850e-47 |
Msa0364010 | Msa1194170 | -0.805698 | 1.177521e-49 | -8.615850e-47 |
Msa0364010 | Msa1203840 | 0.820265 | 7.515982e-53 | -8.615850e-47 |
Msa0364010 | Msa1203860 | 0.827580 | 1.446546e-54 | -8.615850e-47 |
Msa0364010 | Msa1211300 | 0.819973 | 8.766118e-53 | -8.615850e-47 |
Msa0364010 | Msa1211390 | 0.806467 | 8.110821e-50 | -8.615850e-47 |
Msa0364010 | Msa1215660 | 0.801915 | 7.186018e-49 | -8.615850e-47 |
Msa0364010 | Msa1216370 | -0.820422 | 6.917334e-53 | -8.615850e-47 |
Msa0364010 | Msa1216700 | 0.836808 | 7.533261e-57 | -8.615850e-47 |
Msa0364010 | Msa1216900 | 0.805788 | 1.126989e-49 | -8.615850e-47 |
Msa0364010 | Msa1221170 | -0.819120 | 1.372538e-52 | -8.615850e-47 |
Msa0364010 | Msa1223510 | 0.833196 | 6.128615e-56 | -8.615850e-47 |
Msa0364010 | Msa1229770 | 0.833589 | 4.890318e-56 | -8.615850e-47 |
Msa0364010 | Msa1230190 | 0.807863 | 4.106725e-50 | -8.615850e-47 |
Msa0364010 | Msa1242990 | 0.837159 | 6.126086e-57 | -8.615850e-47 |
Msa0364010 | Msa1243630 | 0.813181 | 2.914164e-51 | -8.615850e-47 |
Msa0364010 | Msa1244220 | 0.812168 | 4.856835e-51 | -8.615850e-47 |
Msa0364010 | Msa1246420 | 0.836428 | 9.412327e-57 | -8.615850e-47 |
Msa0364010 | Msa1257930 | 0.819948 | 8.884353e-53 | -8.615850e-47 |
Msa0364010 | Msa1257960 | 0.803062 | 4.170019e-49 | -8.615850e-47 |
Msa0364010 | Msa1258020 | -0.811365 | 7.260119e-51 | -8.615850e-47 |
Msa0364010 | Msa1262740 | 0.826676 | 2.380304e-54 | -8.615850e-47 |
Msa0364010 | Msa1263000 | -0.806953 | 6.402434e-50 | -8.615850e-47 |
Msa0364010 | Msa1263610 | 0.867317 | 1.496658e-65 | -8.615850e-47 |
Msa0364010 | Msa1264140 | 0.809912 | 1.496639e-50 | -8.615850e-47 |
Msa0364010 | Msa1282210 | 0.818118 | 2.316370e-52 | -8.615850e-47 |
Msa0364010 | Msa1287160 | 0.805708 | 1.171630e-49 | -8.615850e-47 |
Msa0364010 | Msa1287340 | 0.821589 | 3.726494e-53 | -8.615850e-47 |
Msa0364010 | Msa1292700 | 0.808213 | 3.458518e-50 | -8.615850e-47 |
Msa0364010 | Msa1299280 | -0.803866 | 2.840824e-49 | -8.615850e-47 |
Msa0364010 | Msa1301410 | 0.810904 | 9.138616e-51 | -8.615850e-47 |
Msa0364010 | Msa1302780 | 0.841856 | 3.686497e-58 | -8.615850e-47 |
Msa0364010 | Msa1306700 | 0.801924 | 7.156111e-49 | -8.615850e-47 |
Msa0364010 | Msa1307800 | 0.809840 | 1.550832e-50 | -8.615850e-47 |
Msa0364010 | Msa1309910 | 0.805081 | 1.586023e-49 | -8.615850e-47 |
Msa0364010 | Msa1323920 | 0.840797 | 7.004968e-58 | -8.615850e-47 |
Msa0364010 | Msa1325850 | 0.803660 | 3.135674e-49 | -8.615850e-47 |
Msa0364010 | Msa1329660 | 0.837576 | 4.792009e-57 | -8.615850e-47 |
Msa0364010 | Msa1336350 | 0.824183 | 9.266150e-54 | -8.615850e-47 |
Msa0364010 | Msa1342400 | 0.850376 | 1.767349e-60 | -8.615850e-47 |
Msa0364010 | Msa1348330 | -0.800410 | 1.460027e-48 | -8.615850e-47 |
Msa0364010 | Msa1353280 | 0.849149 | 3.892907e-60 | -8.615850e-47 |
Msa0364010 | Msa1356730 | 0.824558 | 7.561979e-54 | -8.615850e-47 |
Msa0364010 | Msa1357720 | 0.851309 | 9.650325e-61 | -8.615850e-47 |
Msa0364010 | Msa1357840 | -0.801540 | 8.580120e-49 | -8.615850e-47 |
Msa0364010 | Msa1368660 | 0.823159 | 1.609299e-53 | -8.615850e-47 |
Msa0364010 | Msa1384980 | 0.808832 | 2.550864e-50 | -8.615850e-47 |
Msa0364010 | Msa1388070 | 0.818559 | 1.840227e-52 | -8.615850e-47 |
Msa0364010 | Msa1388270 | 0.827604 | 1.427538e-54 | -8.615850e-47 |
Msa0364010 | Msa1393600 | 0.829614 | 4.664233e-55 | -8.615850e-47 |
Msa0364010 | Msa1401000 | 0.836754 | 7.774958e-57 | -8.615850e-47 |
Msa0364010 | Msa1401650 | -0.800952 | 1.132094e-48 | -8.615850e-47 |
Msa0364010 | Msa1403950 | 0.809669 | 1.687489e-50 | -8.615850e-47 |
Msa0364010 | Msa1413900 | 0.825926 | 3.591346e-54 | -8.615850e-47 |
Msa0364010 | Msa1414560 | 0.822925 | 1.824512e-53 | -8.615850e-47 |
Msa0364010 | Msa1415120 | 0.816091 | 6.612229e-52 | -8.615850e-47 |
Msa0364010 | Msa1415270 | 0.813850 | 2.077746e-51 | -8.615850e-47 |
Msa0364010 | Msa1422150 | 0.825803 | 3.840860e-54 | -8.615850e-47 |
Msa0364010 | Msa1427180 | 0.837081 | 6.413488e-57 | -8.615850e-47 |
Msa0364010 | Msa1431180 | 0.829746 | 4.331806e-55 | -8.615850e-47 |
Msa0364010 | Msa1431870 | 0.809720 | 1.645597e-50 | -8.615850e-47 |
Msa0364010 | Msa1432250 | 0.812207 | 4.762504e-51 | -8.615850e-47 |
Msa0364010 | Msa1433380 | 0.823549 | 1.304388e-53 | -8.615850e-47 |
Msa0364010 | Msa1446220 | 0.821806 | 3.318759e-53 | -8.615850e-47 |
Msa0364010 | Msa1447990 | 0.800308 | 1.531559e-48 | -8.615850e-47 |
Msa0364010 | Msa1451690 | 0.805652 | 1.203616e-49 | -8.615850e-47 |
Msa0364010 | Msa1452200 | 0.842699 | 2.205108e-58 | -8.615850e-47 |
Msa0364010 | Msa1454940 | 0.813907 | 2.018430e-51 | -8.615850e-47 |
Msa0364010 | Msa1458530 | -0.801152 | 1.030255e-48 | -8.615850e-47 |
Msa0364010 | Msa1459610 | -0.812437 | 4.241957e-51 | -8.615850e-47 |
Msa0364010 | Msa1459630 | 0.825414 | 4.750364e-54 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0364010 | MtrunA17_Chr3g0103441 | 99.528 | 212 | 1 | 0 | 12 | 223 | 1 | 212 | 1.35e-161 | 444 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0364010 | AT5G19855.1 | 54.091 | 220 | 82 | 3 | 1 | 219 | 1 | 202 | 1.09e-81 | 243 |
Msa0364010 | AT5G19855.2 | 45.679 | 162 | 69 | 3 | 1 | 161 | 1 | 144 | 1.81e-43 | 144 |
Find 78 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCTTAACCTTTATGCTAAA+TGG | 0.110147 | 3_1:-56681224 | Msa0364010:CDS |
TGAGATGAAGGATTTATAAT+TGG | 0.183394 | 3_1:-56680781 | Msa0364010:three_prime_UTR |
TTATAAAACCACGTATATTT+AGG | 0.215191 | 3_1:+56682654 | None:intergenic |
AGTAGGTATTTATTTAATAA+AGG | 0.246353 | 3_1:+56683949 | None:intergenic |
TTGGACCTCAATAATTTATA+TGG | 0.249901 | 3_1:-56684136 | Msa0364010:five_prime_UTR |
ATGTGTCAATTTCCCGTAAC+AGG | 0.276020 | 3_1:-56680880 | Msa0364010:three_prime_UTR |
TAATGGACTCTGTATTTAAA+AGG | 0.281463 | 3_1:+56680816 | None:intergenic |
TTGACTCTCCATTCCCTTCC+AGG | 0.282181 | 3_1:+56683570 | None:intergenic |
GCGCGGCGGCGGAAGAACTA+TGG | 0.291206 | 3_1:-56683616 | Msa0364010:CDS |
GTAGGAGCAATATCTGTTAT+TGG | 0.302873 | 3_1:-56683774 | Msa0364010:CDS |
TCTCAAACAATTCAATATAA+TGG | 0.320527 | 3_1:+56680799 | None:intergenic |
CCTTGACCCATTTAGCATAA+AGG | 0.329549 | 3_1:+56681217 | None:intergenic |
TTACGGGAAATTGACACATT+TGG | 0.338762 | 3_1:+56680884 | None:intergenic |
GTAGGTATTTATTTAATAAA+GGG | 0.348053 | 3_1:+56683950 | None:intergenic |
GAGATGAAGGATTTATAATT+GGG | 0.361430 | 3_1:-56680780 | Msa0364010:three_prime_UTR |
TATTGAATTGTTTGAGATGA+AGG | 0.361825 | 3_1:-56680793 | Msa0364010:three_prime_UTR |
TTTGATGGGAAAGAAGCATT+TGG | 0.380847 | 3_1:-56683643 | Msa0364010:CDS |
GACAGCAGCTCAGAATTAAT+TGG | 0.381941 | 3_1:-56681003 | Msa0364010:CDS |
TATTAAATAAATACCTACTT+AGG | 0.392472 | 3_1:-56683945 | Msa0364010:five_prime_UTR |
AAATCTGGTAATCCTGTTAC+GGG | 0.397622 | 3_1:+56680868 | None:intergenic |
GCTTAACCTTTATGCTAAAT+GGG | 0.410431 | 3_1:-56681223 | Msa0364010:CDS |
GAGGTCCAAAATTGTCCAAC+AGG | 0.410809 | 3_1:+56684150 | None:intergenic |
TTGAGATTCATATTAGTTGT+TGG | 0.412533 | 3_1:+56683699 | None:intergenic |
TGTTATTGGTTCATCAATGA+TGG | 0.412805 | 3_1:-56683760 | Msa0364010:CDS |
GAAGGTTGAAGAAGAGAAAG+AGG | 0.415633 | 3_1:+56684031 | None:intergenic |
TAAATCTGGTAATCCTGTTA+CGG | 0.416228 | 3_1:+56680867 | None:intergenic |
AGTTGGAACTTGTGCTGTTA+CGG | 0.423818 | 3_1:+56683983 | None:intergenic |
CGCGGCGGCGGAAGAACTAT+GGG | 0.427517 | 3_1:-56683615 | Msa0364010:CDS |
AGTTGGTATTGTTGATACTT+TGG | 0.428335 | 3_1:-56683817 | Msa0364010:five_prime_UTR |
CAATTTACATAATATAAATC+TGG | 0.435763 | 3_1:+56680853 | None:intergenic |
GTTACCATTGTTAGTGAGCT+TGG | 0.439389 | 3_1:-56683504 | Msa0364010:CDS |
GACTCATGGAGACAGTAATA+TGG | 0.445142 | 3_1:-56681035 | Msa0364010:CDS |
CTCTTGAAAACGTACACAAA+TGG | 0.447892 | 3_1:+56683855 | None:intergenic |
AGAAAGAGGAAGCAGTTTGA+AGG | 0.452121 | 3_1:+56684045 | None:intergenic |
ACTAATATGAATCTCAAGAT+TGG | 0.454557 | 3_1:-56683693 | Msa0364010:CDS |
AAAGTAAACCAAAGAAAAGA+AGG | 0.466036 | 3_1:+56684077 | None:intergenic |
AGAAGCAACGCAGTAATGAT+AGG | 0.467537 | 3_1:-56683530 | Msa0364010:CDS |
CGGATGCAGAGTTTGTTTGA+AGG | 0.480803 | 3_1:+56684013 | None:intergenic |
TTCTGAGCTGCTGTCATCTG+AGG | 0.484742 | 3_1:+56681011 | None:intergenic |
TCAAATATCAGATGAAAACT+TGG | 0.498143 | 3_1:-56681073 | Msa0364010:CDS |
ATGAATCTCAAGATTGGTTG+TGG | 0.515787 | 3_1:-56683687 | Msa0364010:CDS |
CTAGGAATCAAACAAAAGGT+TGG | 0.519851 | 3_1:+56680948 | None:intergenic |
TAGACTAGGAATCAAACAAA+AGG | 0.523858 | 3_1:+56680944 | None:intergenic |
AGAGTACCTTCCCAAGCAAT+CGG | 0.524539 | 3_1:+56681872 | None:intergenic |
TGAGCTTGGTGGTCAATATG+AGG | 0.525773 | 3_1:-56683490 | Msa0364010:CDS |
GTTAACCATATAAATTATTG+AGG | 0.525850 | 3_1:+56684131 | None:intergenic |
TAAAACCACGTATATTTAGG+TGG | 0.529191 | 3_1:+56682657 | None:intergenic |
CATTTGGAAAAGCGCGGCGG+CGG | 0.533131 | 3_1:-56683627 | Msa0364010:CDS |
GTTGATGAGGGAACGACTCA+TGG | 0.541090 | 3_1:-56681049 | Msa0364010:CDS |
CTGAAAGAGTGATGTTGACT+CGG | 0.544416 | 3_1:-56681245 | Msa0364010:CDS |
ATGAAAACTTGGAGTTGATG+AGG | 0.546304 | 3_1:-56681062 | Msa0364010:CDS |
GCTCAACTATTTCACGTACA+AGG | 0.554693 | 3_1:-56682718 | Msa0364010:CDS |
ACCATTGTTAGTGAGCTTGG+TGG | 0.561493 | 3_1:-56683501 | Msa0364010:CDS |
GAAAGAGGAAGCAGTTTGAA+GGG | 0.569048 | 3_1:+56684046 | None:intergenic |
CACTGGTCCATGTTTGTGTG+TGG | 0.571186 | 3_1:-56683730 | Msa0364010:CDS |
TGAAAACTTGGAGTTGATGA+GGG | 0.575874 | 3_1:-56681061 | Msa0364010:CDS |
TCTGAGCTGCTGTCATCTGA+GGG | 0.576725 | 3_1:+56681012 | None:intergenic |
AAAACCACGTATATTTAGGT+GGG | 0.578910 | 3_1:+56682658 | None:intergenic |
GAAGCAGTTTGAAGGGTGCA+AGG | 0.581441 | 3_1:+56684053 | None:intergenic |
ACAAAAGGTTGGAAACAGAA+AGG | 0.583898 | 3_1:+56680959 | None:intergenic |
TTACTGATCCTGGAAGGGAA+TGG | 0.584500 | 3_1:-56683578 | Msa0364010:CDS |
CCTTTATGCTAAATGGGTCA+AGG | 0.586094 | 3_1:-56681217 | Msa0364010:intron |
CATTTGGAAACAATACATGT+TGG | 0.587080 | 3_1:+56680900 | None:intergenic |
GTATCAAACAAACCACAAGA+TGG | 0.596691 | 3_1:-56681907 | Msa0364010:CDS |
AGTGCATCCACACACAAACA+TGG | 0.606637 | 3_1:+56683723 | None:intergenic |
ATACTTTGGATTTGTGAGAG+AGG | 0.615587 | 3_1:-56683803 | Msa0364010:five_prime_UTR |
TTGTGAGAGAGGAACATGGT+AGG | 0.618504 | 3_1:-56683792 | Msa0364010:exon |
TCAATGATGGACTCACACAC+TGG | 0.620604 | 3_1:-56683747 | Msa0364010:CDS |
ACCACCAAGCTCACTAACAA+TGG | 0.632085 | 3_1:+56683500 | None:intergenic |
ATAAAGTTTACACCTAGACT+AGG | 0.637143 | 3_1:+56680930 | None:intergenic |
TGTGCTGTTACGGTCAAAGA+CGG | 0.638016 | 3_1:+56683993 | None:intergenic |
AAGTAAACCAAAGAAAAGAA+GGG | 0.639453 | 3_1:+56684078 | None:intergenic |
GGATTTGTGAGAGAGGAACA+TGG | 0.670016 | 3_1:-56683796 | Msa0364010:exon |
AAGAAGCATTTGGAAAAGCG+CGG | 0.684459 | 3_1:-56683633 | Msa0364010:CDS |
ATTTCACGTACAAGGCTGTG+AGG | 0.686265 | 3_1:-56682710 | Msa0364010:CDS |
AAGCATTTGGAAAAGCGCGG+CGG | 0.723101 | 3_1:-56683630 | Msa0364010:CDS |
GCGGCGGCGGAAGAACTATG+GGG | 0.724394 | 3_1:-56683614 | Msa0364010:CDS |
TGAACCCACCTAAATATACG+TGG | 0.753733 | 3_1:-56682662 | Msa0364010:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTGTATTTAAAATCTTATT+AGG | - | chr3_1:56681652-56681671 | Msa0364010:intron | 10.0% |
!!! | TTTTATTTAAATTTTCCTGT+TGG | - | chr3_1:56680759-56680778 | Msa0364010:three_prime_UTR | 15.0% |
!! | GTAGGTATTTATTTAATAAA+GGG | + | chr3_1:56680977-56680996 | None:intergenic | 15.0% |
!! | AGTAGGTATTTATTTAATAA+AGG | + | chr3_1:56680978-56680997 | None:intergenic | 15.0% |
!! | TATTAAATAAATACCTACTT+AGG | - | chr3_1:56680979-56680998 | Msa0364010:three_prime_UTR | 15.0% |
!!! | AATAGAAAACATAATTTTCA+AGG | + | chr3_1:56682338-56682357 | None:intergenic | 15.0% |
!!! | AAGATTATTGATAATCAATT+TGG | + | chr3_1:56682573-56682592 | None:intergenic | 15.0% |
!!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr3_1:56683313-56683332 | None:intergenic | 15.0% |
!! | AATAGTTAATAAGGATAATT+CGG | - | chr3_1:56683336-56683355 | Msa0364010:intron | 15.0% |
!! | TTCAAATTCAAATGTATTAT+TGG | + | chr3_1:56683593-56683612 | None:intergenic | 15.0% |
!! | AGAATAATATTGTTAAACAA+TGG | + | chr3_1:56683797-56683816 | None:intergenic | 15.0% |
!! | CAATTTACATAATATAAATC+TGG | + | chr3_1:56684074-56684093 | None:intergenic | 15.0% |
!! | GTTAACCATATAAATTATTG+AGG | + | chr3_1:56680796-56680815 | None:intergenic | 20.0% |
!!! | GCTTATATTTTTGTTTTGTT+AGG | - | chr3_1:56681003-56681022 | Msa0364010:CDS | 20.0% |
!!! | TAACATGATCTAAATTTTGT+TGG | - | chr3_1:56681481-56681500 | Msa0364010:intron | 20.0% |
!!! | AACATTTTTTGAGTTAAGAT+TGG | - | chr3_1:56681612-56681631 | Msa0364010:intron | 20.0% |
!! | AAAAATTGAGGAAATACAAA+AGG | + | chr3_1:56681842-56681861 | None:intergenic | 20.0% |
!! | CATGTAAAGATTAAAAATTG+AGG | + | chr3_1:56681854-56681873 | None:intergenic | 20.0% |
!! | TTATAAAACCACGTATATTT+AGG | + | chr3_1:56682273-56682292 | None:intergenic | 20.0% |
!! | ATTTGTCCTTAAATCATATT+AGG | - | chr3_1:56682833-56682852 | Msa0364010:intron | 20.0% |
!!! | AACATCAACATTTTTCTTAA+AGG | + | chr3_1:56682864-56682883 | None:intergenic | 20.0% |
!! | TCTAAATAATTACCATACTT+TGG | + | chr3_1:56682955-56682974 | None:intergenic | 20.0% |
!! | TATGAAATGATTAATAACTG+GGG | + | chr3_1:56683088-56683107 | None:intergenic | 20.0% |
!! | GTATGAAATGATTAATAACT+GGG | + | chr3_1:56683089-56683108 | None:intergenic | 20.0% |
!! | TGTATGAAATGATTAATAAC+TGG | + | chr3_1:56683090-56683109 | None:intergenic | 20.0% |
!!! | CATTTTGAAACAAACTTTTT+TGG | + | chr3_1:56683210-56683229 | None:intergenic | 20.0% |
!! | AAACTAACCAATAGTTAATA+AGG | - | chr3_1:56683327-56683346 | Msa0364010:intron | 20.0% |
!! | GAATTATCCTTATTAACTAT+TGG | + | chr3_1:56683337-56683356 | None:intergenic | 20.0% |
!! | AATGATTAAAAGAAAGAGAA+TGG | + | chr3_1:56683370-56683389 | None:intergenic | 20.0% |
!! | CAAGTAAATACAAATATTCA+TGG | + | chr3_1:56683639-56683658 | None:intergenic | 20.0% |
!! | AATATTTGTATTTACTTGAC+AGG | - | chr3_1:56683641-56683660 | Msa0364010:CDS | 20.0% |
!! | TCTCAAACAATTCAATATAA+TGG | + | chr3_1:56684128-56684147 | None:intergenic | 20.0% |
! | TTGGACCTCAATAATTTATA+TGG | - | chr3_1:56680788-56680807 | Msa0364010:three_prime_UTR | 25.0% |
! | AAGTAAACCAAAGAAAAGAA+GGG | + | chr3_1:56680849-56680868 | None:intergenic | 25.0% |
! | AAAGTAAACCAAAGAAAAGA+AGG | + | chr3_1:56680850-56680869 | None:intergenic | 25.0% |
! | AAAAATATAAGCACCTAAGT+AGG | + | chr3_1:56680995-56681014 | None:intergenic | 25.0% |
! | TTGAGATTCATATTAGTTGT+TGG | + | chr3_1:56681228-56681247 | None:intergenic | 25.0% |
! | ACTAATATGAATCTCAAGAT+TGG | - | chr3_1:56681231-56681250 | Msa0364010:CDS | 25.0% |
! | ATAGTTATACCATCAATATC+AGG | + | chr3_1:56681695-56681714 | None:intergenic | 25.0% |
!! | TAGGACATTCATATTTCTAA+TGG | + | chr3_1:56681947-56681966 | None:intergenic | 25.0% |
! | AGAAATATGAATGTCCTAAT+TGG | - | chr3_1:56681949-56681968 | Msa0364010:intron | 25.0% |
! | TTCATAACATAGCAACAAAA+AGG | + | chr3_1:56682134-56682153 | None:intergenic | 25.0% |
! | GTAAGTGAATTCTTTATTCT+AGG | - | chr3_1:56682293-56682312 | Msa0364010:intron | 25.0% |
!!! | AATTTGGTTTTTTGTCTAAG+AGG | + | chr3_1:56682557-56682576 | None:intergenic | 25.0% |
!! | GAGCTCATAATTTTGTTAAA+AGG | - | chr3_1:56682718-56682737 | Msa0364010:CDS | 25.0% |
! | GTGTAACCTAATATGATTTA+AGG | + | chr3_1:56682842-56682861 | None:intergenic | 25.0% |
! | AGAAAAATGTTGATGTTGTT+AGG | - | chr3_1:56682867-56682886 | Msa0364010:intron | 25.0% |
!! | ACTTTTACAATTCCAAAGTA+TGG | - | chr3_1:56682940-56682959 | Msa0364010:intron | 25.0% |
!!! | ATTGATGTTTTGTTCTATGT+TGG | - | chr3_1:56682984-56683003 | Msa0364010:intron | 25.0% |
! | GTCTTATGAATGGAAAAATT+AGG | + | chr3_1:56683542-56683561 | None:intergenic | 25.0% |
! | ACATGTAAAATAATTCGTGA+AGG | - | chr3_1:56683765-56683784 | Msa0364010:CDS | 25.0% |
! | TCAAATATCAGATGAAAACT+TGG | - | chr3_1:56683851-56683870 | Msa0364010:five_prime_UTR | 25.0% |
!!! | TAATGGACTCTGTATTTAAA+AGG | + | chr3_1:56684111-56684130 | None:intergenic | 25.0% |
!! | TATTGAATTGTTTGAGATGA+AGG | - | chr3_1:56684131-56684150 | Msa0364010:five_prime_UTR | 25.0% |
! | TGAGATGAAGGATTTATAAT+TGG | - | chr3_1:56684143-56684162 | Msa0364010:five_prime_UTR | 25.0% |
! | GAGATGAAGGATTTATAATT+GGG | - | chr3_1:56684144-56684163 | Msa0364010:five_prime_UTR | 25.0% |
! | ATTTTCCTGTTGGACAATTT+TGG | - | chr3_1:56680769-56680788 | Msa0364010:three_prime_UTR | 30.0% |
!!! | AGGGTGTGAGATTTTTTTAA+GGG | + | chr3_1:56680830-56680849 | None:intergenic | 30.0% |
!!! | AAGGGTGTGAGATTTTTTTA+AGG | + | chr3_1:56680831-56680850 | None:intergenic | 30.0% |
! | TAAAGGGTATGCAAAAAAGT+TGG | + | chr3_1:56680961-56680980 | None:intergenic | 30.0% |
! | AGTTGTGATTTTCTTGTAGT+TGG | - | chr3_1:56681090-56681109 | Msa0364010:CDS | 30.0% |
! | AGTTGGTATTGTTGATACTT+TGG | - | chr3_1:56681107-56681126 | Msa0364010:intron | 30.0% |
!! | TGTTATTGGTTCATCAATGA+TGG | - | chr3_1:56681164-56681183 | Msa0364010:intron | 30.0% |
! | TGTTTTGTGGAAGAATTTGA+TGG | - | chr3_1:56681266-56681285 | Msa0364010:intron | 30.0% |
! | GTTTTGTGGAAGAATTTGAT+GGG | - | chr3_1:56681267-56681286 | Msa0364010:intron | 30.0% |
!! | CACTTTTGAGGATGTTAAAA+CGG | - | chr3_1:56681458-56681477 | Msa0364010:intron | 30.0% |
TGTTACAAACATTGAATCAG+AGG | + | chr3_1:56681533-56681552 | None:intergenic | 30.0% | |
GAATCTAAACCTGATATTGA+TGG | - | chr3_1:56681683-56681702 | Msa0364010:intron | 30.0% | |
AAATGATCATATTGAACAGC+AGG | + | chr3_1:56681977-56681996 | None:intergenic | 30.0% | |
AGCTCTGTAATATGAACTAT+AGG | + | chr3_1:56682015-56682034 | None:intergenic | 30.0% | |
AAAACCACGTATATTTAGGT+GGG | + | chr3_1:56682269-56682288 | None:intergenic | 30.0% | |
TAAAACCACGTATATTTAGG+TGG | + | chr3_1:56682270-56682289 | None:intergenic | 30.0% | |
! | ATGTTTTCTATTTAGACGCA+TGG | - | chr3_1:56682346-56682365 | Msa0364010:intron | 30.0% |
! | GTTTTCCACAAAATCTTTCT+AGG | - | chr3_1:56682429-56682448 | Msa0364010:intron | 30.0% |
ACTTAGATTGCTTTCATGAT+CGG | - | chr3_1:56682531-56682550 | Msa0364010:intron | 30.0% | |
! | CAAAATTGCTCAATTTTGTC+TGG | + | chr3_1:56682629-56682648 | None:intergenic | 30.0% |
CTTTCTTGTTCTTATAGATC+AGG | - | chr3_1:56682656-56682675 | Msa0364010:CDS | 30.0% | |
! | ATAAAACGTTTTCCATCTTG+TGG | + | chr3_1:56683032-56683051 | None:intergenic | 30.0% |
! | AATGTAACTTTTGGATACGA+GGG | + | chr3_1:56683485-56683504 | None:intergenic | 30.0% |
! | ACAAGATCCAATGTAACTTT+TGG | + | chr3_1:56683494-56683513 | None:intergenic | 30.0% |
GCTTAACCTTTATGCTAAAT+GGG | - | chr3_1:56683701-56683720 | Msa0364010:CDS | 30.0% | |
! | ATGCAGTGAATTTTGAATTC+CGG | + | chr3_1:56683735-56683754 | None:intergenic | 30.0% |
TAGACTAGGAATCAAACAAA+AGG | + | chr3_1:56683983-56684002 | None:intergenic | 30.0% | |
!! | TTTTGTTTGATTCCTAGTCT+AGG | - | chr3_1:56683982-56684001 | Msa0364010:five_prime_UTR | 30.0% |
ATAAAGTTTACACCTAGACT+AGG | + | chr3_1:56683997-56684016 | None:intergenic | 30.0% | |
CATTTGGAAACAATACATGT+TGG | + | chr3_1:56684027-56684046 | None:intergenic | 30.0% | |
TAAATCTGGTAATCCTGTTA+CGG | + | chr3_1:56684060-56684079 | None:intergenic | 30.0% | |
!!! | GATTTTTTTAAGGGTGTGTG+TGG | + | chr3_1:56680821-56680840 | None:intergenic | 35.0% |
ACGTACACAAATGGAAAAAG+TGG | + | chr3_1:56681063-56681082 | None:intergenic | 35.0% | |
CTCTTGAAAACGTACACAAA+TGG | + | chr3_1:56681072-56681091 | None:intergenic | 35.0% | |
ATACTTTGGATTTGTGAGAG+AGG | - | chr3_1:56681121-56681140 | Msa0364010:intron | 35.0% | |
GTAGGAGCAATATCTGTTAT+TGG | - | chr3_1:56681150-56681169 | Msa0364010:intron | 35.0% | |
! | ATGAATCTCAAGATTGGTTG+TGG | - | chr3_1:56681237-56681256 | Msa0364010:CDS | 35.0% |
!! | TTTGATGGGAAAGAAGCATT+TGG | - | chr3_1:56681281-56681300 | Msa0364010:intron | 35.0% |
! | AGTAGTTCTTTTACTGATCC+TGG | - | chr3_1:56681336-56681355 | Msa0364010:intron | 35.0% |
! | TTCTTTTACTGATCCTGGAA+GGG | - | chr3_1:56681341-56681360 | Msa0364010:intron | 35.0% |
! | TCAATATGAGGACACTTTTG+AGG | - | chr3_1:56681446-56681465 | Msa0364010:intron | 35.0% |
CAACCTATTAATCACTGACA+CGG | - | chr3_1:56681735-56681754 | Msa0364010:intron | 35.0% | |
TAGCAACAAAAAGGTGATAG+TGG | + | chr3_1:56682125-56682144 | None:intergenic | 35.0% | |
ATCCACGATGACTCAAATAT+AGG | - | chr3_1:56682385-56682404 | Msa0364010:intron | 35.0% | |
TTCCTATATTTGAGTCATCG+TGG | + | chr3_1:56682390-56682409 | None:intergenic | 35.0% | |
! | AAAGATTTTGTGGAAAACCC+TGG | + | chr3_1:56682427-56682446 | None:intergenic | 35.0% |
! | TAGTGCCTAGAAAGATTTTG+TGG | + | chr3_1:56682437-56682456 | None:intergenic | 35.0% |
GGATAAAAAAGACTTGCACT+TGG | + | chr3_1:56682488-56682507 | None:intergenic | 35.0% | |
TATGAGCTCAAAGCAAATGT+CGG | + | chr3_1:56682707-56682726 | None:intergenic | 35.0% | |
ATTGAAGTGTGGAAAAGTCT+TGG | + | chr3_1:56682771-56682790 | None:intergenic | 35.0% | |
! | AAGACTTTTCCACACTTCAA+TGG | - | chr3_1:56682770-56682789 | Msa0364010:intron | 35.0% |
! | AGACTTTTCCACACTTCAAT+GGG | - | chr3_1:56682771-56682790 | Msa0364010:intron | 35.0% |
GTATCAAACAAACCACAAGA+TGG | - | chr3_1:56683017-56683036 | Msa0364010:intron | 35.0% | |
! | AAACGTTTTATCCGATTGCT+TGG | - | chr3_1:56683041-56683060 | Msa0364010:intron | 35.0% |
! | AACGTTTTATCCGATTGCTT+GGG | - | chr3_1:56683042-56683061 | Msa0364010:intron | 35.0% |
!!! | GACACTCATTTTGAAACGAA+GGG | + | chr3_1:56683180-56683199 | None:intergenic | 35.0% |
! | TGTGCAGAGTATTAATTGGA+GGG | + | chr3_1:56683284-56683303 | None:intergenic | 35.0% |
! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr3_1:56683288-56683307 | None:intergenic | 35.0% |
!! | TTCAAAATGAGTGTCGCTTT+AGG | + | chr3_1:56683185-56683204 | None:intergenic | 35.0% |
!! | AAGCGACACTCATTTTGAAA+CGG | - | chr3_1:56683419-56683438 | Msa0364010:intron | 35.0% |
GATACGAGGGTAAAACAAAA+TGG | + | chr3_1:56683472-56683491 | None:intergenic | 35.0% | |
! | CAATGTAACTTTTGGATACG+AGG | + | chr3_1:56683486-56683505 | None:intergenic | 35.0% |
CTCGTATCCAAAAGTTACAT+TGG | - | chr3_1:56683484-56683503 | Msa0364010:CDS | 35.0% | |
! | TCAGAATCGAGTCTTATGAA+TGG | + | chr3_1:56683552-56683571 | None:intergenic | 35.0% |
GGCTTAACCTTTATGCTAAA+TGG | - | chr3_1:56683700-56683719 | Msa0364010:CDS | 35.0% | |
!! | ATGAAAACTTGGAGTTGATG+AGG | - | chr3_1:56683862-56683881 | Msa0364010:five_prime_UTR | 35.0% |
!! | TGAAAACTTGGAGTTGATGA+GGG | - | chr3_1:56683863-56683882 | Msa0364010:five_prime_UTR | 35.0% |
ACAAAAGGTTGGAAACAGAA+AGG | + | chr3_1:56683968-56683987 | None:intergenic | 35.0% | |
CTAGGAATCAAACAAAAGGT+TGG | + | chr3_1:56683979-56683998 | None:intergenic | 35.0% | |
TTACGGGAAATTGACACATT+TGG | + | chr3_1:56684043-56684062 | None:intergenic | 35.0% | |
AAATCTGGTAATCCTGTTAC+GGG | + | chr3_1:56684059-56684078 | None:intergenic | 35.0% | |
! | TCTCACACCCTTCTTTTCTT+TGG | - | chr3_1:56680839-56680858 | Msa0364010:three_prime_UTR | 40.0% |
GAAAGAGGAAGCAGTTTGAA+GGG | + | chr3_1:56680881-56680900 | None:intergenic | 40.0% | |
AGAAAGAGGAAGCAGTTTGA+AGG | + | chr3_1:56680882-56680901 | None:intergenic | 40.0% | |
GAAGGTTGAAGAAGAGAAAG+AGG | + | chr3_1:56680896-56680915 | None:intergenic | 40.0% | |
! | AGTTGGAACTTGTGCTGTTA+CGG | + | chr3_1:56680944-56680963 | None:intergenic | 40.0% |
!!! | GTTGTGGAGATGTTGTTTTG+TGG | - | chr3_1:56681253-56681272 | Msa0364010:CDS | 40.0% |
!! | AAGAAGCATTTGGAAAAGCG+CGG | - | chr3_1:56681291-56681310 | Msa0364010:intron | 40.0% |
! | GTTCTTTTACTGATCCTGGA+AGG | - | chr3_1:56681340-56681359 | Msa0364010:intron | 40.0% |
AGAAGCAACGCAGTAATGAT+AGG | - | chr3_1:56681394-56681413 | Msa0364010:intron | 40.0% | |
GTTACCATTGTTAGTGAGCT+TGG | - | chr3_1:56681420-56681439 | Msa0364010:intron | 40.0% | |
TGTCCGTGTCAGTGATTAAT+AGG | + | chr3_1:56681741-56681760 | None:intergenic | 40.0% | |
GCTCAACTATTTCACGTACA+AGG | - | chr3_1:56682206-56682225 | Msa0364010:intron | 40.0% | |
TGAACCCACCTAAATATACG+TGG | - | chr3_1:56682262-56682281 | Msa0364010:intron | 40.0% | |
ATCTAAGTCATGTGATCGAG+CGG | + | chr3_1:56682519-56682538 | None:intergenic | 40.0% | |
ATGAGCTCAAAGCAAATGTC+GGG | + | chr3_1:56682706-56682725 | None:intergenic | 40.0% | |
! | TTTTCCACACTTCAATGGGA+AGG | - | chr3_1:56682775-56682794 | Msa0364010:intron | 40.0% |
CTGAGATATACCAATGCAGT+CGG | + | chr3_1:56682810-56682829 | None:intergenic | 40.0% | |
! | TTTTATCCGATTGCTTGGGA+AGG | - | chr3_1:56683046-56683065 | Msa0364010:intron | 40.0% |
!!! | CGACACTCATTTTGAAACGA+AGG | + | chr3_1:56683181-56683200 | None:intergenic | 40.0% |
! | GTGTGCAGAGTATTAATTGG+AGG | + | chr3_1:56683285-56683304 | None:intergenic | 40.0% |
!!! | GACACTCATTTTGAAACGGA+GGG | - | chr3_1:56683423-56683442 | Msa0364010:intron | 40.0% |
TGGATCTTGTGAATTCGAGT+CGG | - | chr3_1:56683504-56683523 | Msa0364010:CDS | 40.0% | |
! | CTGAAAGAGTGATGTTGACT+CGG | - | chr3_1:56683679-56683698 | Msa0364010:CDS | 40.0% |
CCTTGACCCATTTAGCATAA+AGG | + | chr3_1:56683710-56683729 | None:intergenic | 40.0% | |
CCTTTATGCTAAATGGGTCA+AGG | - | chr3_1:56683707-56683726 | Msa0364010:CDS | 40.0% | |
GACTCATGGAGACAGTAATA+TGG | - | chr3_1:56683889-56683908 | Msa0364010:five_prime_UTR | 40.0% | |
GACAGCAGCTCAGAATTAAT+TGG | - | chr3_1:56683921-56683940 | Msa0364010:five_prime_UTR | 40.0% | |
ATGTGTCAATTTCCCGTAAC+AGG | - | chr3_1:56684044-56684063 | Msa0364010:five_prime_UTR | 40.0% | |
GAGGTCCAAAATTGTCCAAC+AGG | + | chr3_1:56680777-56680796 | None:intergenic | 45.0% | |
! | CGGATGCAGAGTTTGTTTGA+AGG | + | chr3_1:56680914-56680933 | None:intergenic | 45.0% |
! | TGTGCTGTTACGGTCAAAGA+CGG | + | chr3_1:56680934-56680953 | None:intergenic | 45.0% |
GGATTTGTGAGAGAGGAACA+TGG | - | chr3_1:56681128-56681147 | Msa0364010:intron | 45.0% | |
TTGTGAGAGAGGAACATGGT+AGG | - | chr3_1:56681132-56681151 | Msa0364010:intron | 45.0% | |
!! | TCAATGATGGACTCACACAC+TGG | - | chr3_1:56681177-56681196 | Msa0364010:intron | 45.0% |
AGTGCATCCACACACAAACA+TGG | + | chr3_1:56681204-56681223 | None:intergenic | 45.0% | |
TTACTGATCCTGGAAGGGAA+TGG | - | chr3_1:56681346-56681365 | Msa0364010:intron | 45.0% | |
ACCATTGTTAGTGAGCTTGG+TGG | - | chr3_1:56681423-56681442 | Msa0364010:intron | 45.0% | |
ACCACCAAGCTCACTAACAA+TGG | + | chr3_1:56681427-56681446 | None:intergenic | 45.0% | |
! | TGAGCTTGGTGGTCAATATG+AGG | - | chr3_1:56681434-56681453 | Msa0364010:intron | 45.0% |
CACCTTATACGACACTGACA+CGG | - | chr3_1:56681765-56681784 | Msa0364010:intron | 45.0% | |
ATCCGTGTCAGTGTCGTATA+AGG | + | chr3_1:56681770-56681789 | None:intergenic | 45.0% | |
TTGAACAGCAGGCTCCAATT+AGG | + | chr3_1:56681966-56681985 | None:intergenic | 45.0% | |
ATTTCACGTACAAGGCTGTG+AGG | - | chr3_1:56682214-56682233 | Msa0364010:intron | 45.0% | |
GAAAACCCCTTTCTTCTCCA+GGG | - | chr3_1:56682407-56682426 | Msa0364010:intron | 45.0% | |
GAAAACCCTGGAGAAGAAAG+GGG | + | chr3_1:56682415-56682434 | None:intergenic | 45.0% | |
GGAAAACCCTGGAGAAGAAA+GGG | + | chr3_1:56682416-56682435 | None:intergenic | 45.0% | |
TGGAAAACCCTGGAGAAGAA+AGG | + | chr3_1:56682417-56682436 | None:intergenic | 45.0% | |
TGTGATCGAGCGGAATCAAA+TGG | + | chr3_1:56682509-56682528 | None:intergenic | 45.0% | |
TTGTCTGGCGAGTGATTGAA+CGG | + | chr3_1:56682614-56682633 | None:intergenic | 45.0% | |
AAGTCTTGGAGTCGAGACAT+TGG | + | chr3_1:56682757-56682776 | None:intergenic | 45.0% | |
ACAACCTTCCCATTGAAGTG+TGG | + | chr3_1:56682782-56682801 | None:intergenic | 45.0% | |
! | AGAGTACCTTCCCAAGCAAT+CGG | + | chr3_1:56683055-56683074 | None:intergenic | 45.0% |
!!! | CGACACTCATTTTGAAACGG+AGG | - | chr3_1:56683422-56683441 | Msa0364010:intron | 45.0% |
! | TGAATTCGAGTCGGTTCAAG+TGG | - | chr3_1:56683513-56683532 | Msa0364010:CDS | 45.0% |
TGCTAAATGGGTCAAGGTAC+CGG | - | chr3_1:56683713-56683732 | Msa0364010:CDS | 45.0% | |
!!! | TTTTATATTAAATTAGAATA+TGG | - | chr3_1:56682082-56682101 | Msa0364010:intron | 5.0% |
! | GAAGCAGTTTGAAGGGTGCA+AGG | + | chr3_1:56680874-56680893 | None:intergenic | 50.0% |
CACTGGTCCATGTTTGTGTG+TGG | - | chr3_1:56681194-56681213 | Msa0364010:intron | 50.0% | |
! | AAGCATTTGGAAAAGCGCGG+CGG | - | chr3_1:56681294-56681313 | Msa0364010:intron | 50.0% |
TTGACTCTCCATTCCCTTCC+AGG | + | chr3_1:56681357-56681376 | None:intergenic | 50.0% | |
!!! | GACGCATGGCAAGAGTGTTT+TGG | - | chr3_1:56682360-56682379 | Msa0364010:intron | 50.0% |
GGAAAACCCCTTTCTTCTCC+AGG | - | chr3_1:56682406-56682425 | Msa0364010:intron | 50.0% | |
GTTGTTTGAGCCGACTGCAT+TGG | - | chr3_1:56682797-56682816 | Msa0364010:intron | 50.0% | |
! | GTTGATGAGGGAACGACTCA+TGG | - | chr3_1:56683875-56683894 | Msa0364010:five_prime_UTR | 50.0% |
TCTGAGCTGCTGTCATCTGA+GGG | + | chr3_1:56683915-56683934 | None:intergenic | 50.0% | |
TTCTGAGCTGCTGTCATCTG+AGG | + | chr3_1:56683916-56683935 | None:intergenic | 50.0% | |
! | CATTTGGAAAAGCGCGGCGG+CGG | - | chr3_1:56681297-56681316 | Msa0364010:intron | 60.0% |
CGCGGCGGCGGAAGAACTAT+GGG | - | chr3_1:56681309-56681328 | Msa0364010:intron | 65.0% | |
GCGGCGGCGGAAGAACTATG+GGG | - | chr3_1:56681310-56681329 | Msa0364010:intron | 65.0% | |
GCGCGGCGGCGGAAGAACTA+TGG | - | chr3_1:56681308-56681327 | Msa0364010:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 56680745 | 56684201 | 56680745 | ID=Msa0364010;Name=Msa0364010 |
chr3_1 | mRNA | 56680745 | 56684201 | 56680745 | ID=Msa0364010-mRNA-1;Parent=Msa0364010;Name=Msa0364010-mRNA-1;_AED=0.04;_eAED=0.04;_QI=402|1|1|1|1|1|5|254|223 |
chr3_1 | exon | 56680745 | 56681121 | 56680745 | ID=Msa0364010-mRNA-1:exon:10527;Parent=Msa0364010-mRNA-1 |
chr3_1 | exon | 56681218 | 56681283 | 56681218 | ID=Msa0364010-mRNA-1:exon:10526;Parent=Msa0364010-mRNA-1 |
chr3_1 | exon | 56681879 | 56681936 | 56681879 | ID=Msa0364010-mRNA-1:exon:10525;Parent=Msa0364010-mRNA-1 |
chr3_1 | exon | 56682654 | 56682745 | 56682654 | ID=Msa0364010-mRNA-1:exon:10524;Parent=Msa0364010-mRNA-1 |
chr3_1 | exon | 56683467 | 56684201 | 56683467 | ID=Msa0364010-mRNA-1:exon:10523;Parent=Msa0364010-mRNA-1 |
chr3_1 | five_prime_UTR | 56683800 | 56684201 | 56683800 | ID=Msa0364010-mRNA-1:five_prime_utr;Parent=Msa0364010-mRNA-1 |
chr3_1 | CDS | 56683467 | 56683799 | 56683467 | ID=Msa0364010-mRNA-1:cds;Parent=Msa0364010-mRNA-1 |
chr3_1 | CDS | 56682654 | 56682745 | 56682654 | ID=Msa0364010-mRNA-1:cds;Parent=Msa0364010-mRNA-1 |
chr3_1 | CDS | 56681879 | 56681936 | 56681879 | ID=Msa0364010-mRNA-1:cds;Parent=Msa0364010-mRNA-1 |
chr3_1 | CDS | 56681218 | 56681283 | 56681218 | ID=Msa0364010-mRNA-1:cds;Parent=Msa0364010-mRNA-1 |
chr3_1 | CDS | 56680999 | 56681121 | 56680999 | ID=Msa0364010-mRNA-1:cds;Parent=Msa0364010-mRNA-1 |
chr3_1 | three_prime_UTR | 56680745 | 56680998 | 56680745 | ID=Msa0364010-mRNA-1:three_prime_utr;Parent=Msa0364010-mRNA-1 |
Gene Sequence |
Protein sequence |