AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0521100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0521100 MtrunA17_Chr3g0137241 96.084 383 3 2 1 383 1 371 0.0 758
Msa0521100 MtrunA17_Chr1g0149651 66.970 439 86 8 1 383 1 436 0.0 557
Msa0521100 MtrunA17_Chr2g0305101 66.006 353 79 6 31 382 42 354 7.66e-159 452
Msa0521100 MtrunA17_Chr4g0065241 80.709 254 41 3 119 370 71 318 1.68e-148 425
Msa0521100 MtrunA17_Chr5g0398181 67.033 273 78 3 119 385 28 294 1.23e-128 373
Msa0521100 MtrunA17_Chr1g0192791 35.249 261 122 8 119 367 20 245 9.16e-31 119
Msa0521100 MtrunA17_Chr2g0289201 28.102 274 166 4 119 391 118 361 1.01e-28 115
Msa0521100 MtrunA17_Chr1g0151961 32.669 251 139 7 119 367 120 342 1.41e-25 107
Msa0521100 MtrunA17_Chr5g0413201 32.669 251 138 6 119 367 73 294 2.04e-25 105
Msa0521100 MtrunA17_Chr5g0439391 29.032 279 152 7 119 391 47 285 2.45e-24 102
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0521100 AT5G25220.2 64.989 437 81 12 1 383 1 419 9.29e-180 508
Msa0521100 AT5G25220.1 64.908 436 81 12 1 382 1 418 5.68e-179 506
Msa0521100 AT5G11060.1 67.233 412 75 12 1 382 1 382 7.46e-173 489
Msa0521100 AT4G32040.2 62.895 380 126 8 6 383 13 379 2.13e-155 444
Msa0521100 AT4G32040.1 62.895 380 126 8 6 383 13 379 2.94e-155 444
Msa0521100 AT1G62990.1 62.759 290 99 4 96 382 7 290 2.14e-126 367
Msa0521100 AT1G70510.1 33.077 260 137 8 112 367 63 289 2.04e-29 117
Msa0521100 AT1G23380.1 32.616 279 143 9 119 389 86 327 9.57e-29 115
Msa0521100 AT1G70510.2 31.923 260 144 7 112 367 63 293 6.82e-28 112
Msa0521100 AT1G23380.2 32.384 281 143 10 119 389 86 329 6.74e-27 110
Msa0521100 AT4G08150.1 33.205 259 130 8 119 367 135 360 9.79e-26 108
Msa0521100 AT1G62360.1 34.400 250 135 6 119 367 122 343 3.16e-25 106

Find 152 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACGTTAATGTGTTAAATAT+TGG 0.253339 3_4:-73745378 None:intergenic
TCTGCTGCCACCATGATATA+AGG 0.271958 3_4:-73745156 None:intergenic
TCACCTATCATTTACTTTGT+TGG 0.277941 3_4:-73745180 None:intergenic
ATCAATAGCTATCTATATTA+TGG 0.294705 3_4:+73741121 Msa0521100:exon
GGTGCTGCAGCTGCAGCTGC+AGG 0.304840 3_4:-73745269 None:intergenic
GATAATAGTATGGGAGGATT+TGG 0.320582 3_4:+73743927 Msa0521100:CDS
TTATATGGAGTATCAATAAA+TGG 0.332298 3_4:-73740983 None:intergenic
ACGTTAATGTGTTAAATATT+GGG 0.333560 3_4:-73745377 None:intergenic
TGCCAGCTGAGCGTCGATCC+TGG 0.345057 3_4:-73741585 None:intergenic
CGATGACTTCGCTGTGGTTT+CGG 0.353018 3_4:-73741385 None:intergenic
TGTACCTGTTAGACTTTGTA+AGG 0.355039 3_4:-73742553 None:intergenic
AAAGGAGATTGGACAGGAAA+TGG 0.358235 3_4:-73740956 None:intergenic
GTACTCTGCGTTAGGACAAC+AGG 0.363398 3_4:+73741631 Msa0521100:CDS
GGATGGTTCAGATAATAGTA+TGG 0.368115 3_4:+73743917 Msa0521100:CDS
CTTTCCAAACTGCACCTAAC+TGG 0.380352 3_4:+73741222 Msa0521100:CDS
AATTGAAACAGATCAATAAC+TGG 0.381851 3_4:+73744914 Msa0521100:CDS
TGATGAATGAACAACTTATA+TGG 0.383013 3_4:-73740998 None:intergenic
GTTGTTGTTGTTCTGTGAAA+TGG 0.389827 3_4:-73741172 None:intergenic
TGCCTTTCAGGAAGAGGATA+AGG 0.392331 3_4:+73744864 Msa0521100:intron
CAGTCCTTACAAAGTCTAAC+AGG 0.396414 3_4:+73742549 Msa0521100:CDS
GAGCGTCGATCCTGGGCAAC+TGG 0.397329 3_4:-73741577 None:intergenic
TAAACAACTCGACCACTTCA+TGG 0.399427 3_4:+73741676 Msa0521100:CDS
GAGCCATTGACCGGAGGATT+GGG 0.403988 3_4:-73741345 None:intergenic
GCAAGGTTGGTGCAAGAAAC+CGG 0.410624 3_4:+73744886 Msa0521100:CDS
TATAGATAGCTATTGATTCA+TGG 0.417433 3_4:-73741115 None:intergenic
TGGTGTCGAGGTTGCGAAGA+AGG 0.418558 3_4:-73741256 None:intergenic
GATCCAACAAAGTAAATGAT+AGG 0.419063 3_4:+73745177 Msa0521100:three_prime_UTR
AGACGAGCTGGAAAACTTCC+TGG 0.420513 3_4:+73744306 Msa0521100:CDS
AGTGATGTTAATCTGTTTGA+TGG 0.421723 3_4:+73743888 Msa0521100:CDS
AGGGCGTTGTTGAGCCAGTT+AGG 0.423606 3_4:-73741236 None:intergenic
TGAGCCAGTTAGGTGCAGTT+TGG 0.424789 3_4:-73741226 None:intergenic
GGAAGCAGTAATGGCTTGTT+GGG 0.426655 3_4:+73742518 Msa0521100:CDS
GTTCCCAATCCTCCGGTCAA+TGG 0.427348 3_4:+73741342 Msa0521100:CDS
AATGGTGGAGTGGGTTGTCT+TGG 0.431285 3_4:-73741154 None:intergenic
TGGAAGCAGTAATGGCTTGT+TGG 0.435199 3_4:+73742517 Msa0521100:CDS
GAAACGCAAAGGTGAAATAA+TGG 0.435340 3_4:+73741487 Msa0521100:CDS
ATCCTGGGCAACTGGTCAAC+CGG 0.438877 3_4:-73741569 None:intergenic
TCAATCAAAGGAAGAGGAAC+TGG 0.439251 3_4:+73744941 Msa0521100:CDS
GAAGTTGGTACTGTTGTTGT+TGG 0.439599 3_4:-73741300 None:intergenic
GCCCAGGATCGACGCTCAGC+TGG 0.442737 3_4:+73741583 Msa0521100:CDS
TAATCTGTTTGATGGAGGTT+TGG 0.446200 3_4:+73743896 Msa0521100:CDS
AGAGCCATTGACCGGAGGAT+TGG 0.446472 3_4:-73741346 None:intergenic
GCCAGCTGAGCGTCGATCCT+GGG 0.452139 3_4:-73741584 None:intergenic
GGTACTGTTGTTGTTGGTTG+TGG 0.453246 3_4:-73741294 None:intergenic
GCCACCATGATATAAGGGTT+TGG 0.453992 3_4:-73745150 None:intergenic
ATTAAAGCATGAGTTGAAAC+AGG 0.455099 3_4:+73744004 Msa0521100:CDS
ATAGAAGCTGTTCATACAAC+GGG 0.456842 3_4:-73741514 None:intergenic
CTTCGCTGTGGTTTCGGTGG+AGG 0.457682 3_4:-73741379 None:intergenic
TTGTCCTAACGCAGAGTACT+TGG 0.459203 3_4:-73741627 None:intergenic
GGGGAATAGAGAGAAAGAAA+TGG 0.460424 3_4:-73741088 None:intergenic
AACCGGCGGTGTCGAGGTTG+AGG 0.460908 3_4:-73741322 None:intergenic
CAGCGGAGGGAGTGATGAAC+TGG 0.464161 3_4:+73741456 Msa0521100:CDS
CGCCGGTTGACCAGTTGCCC+AGG 0.465203 3_4:+73741567 Msa0521100:CDS
CAACCTCAGTACTTAAAGAT+TGG 0.466078 3_4:+73744334 Msa0521100:CDS
TTCAACGCATTAGAAGTTGA+AGG 0.469895 3_4:-73744973 None:intergenic
GTTGTTGTTGGTTGTGGCGG+TGG 0.469972 3_4:-73741288 None:intergenic
CTGCTGCCACCATGATATAA+GGG 0.470829 3_4:-73745155 None:intergenic
CCATGCAATGGAAGCAGTAA+TGG 0.471444 3_4:+73742509 Msa0521100:CDS
GTTGCTCCTGTACCTTCCCC+TGG 0.471752 3_4:-73743834 None:intergenic
CTGTTTGATGGAGGTTTGGA+TGG 0.472583 3_4:+73743900 Msa0521100:CDS
CTGTGGTTTCGGTGGAGGAC+AGG 0.484561 3_4:-73741374 None:intergenic
CATGGACTCGGACATGTTGT+TGG 0.486135 3_4:-73742491 None:intergenic
TAAATGGTTAGAAAGGAGAT+TGG 0.488612 3_4:-73740967 None:intergenic
AGAGTTCTTACAGTAGGATA+AGG 0.489180 3_4:-73744378 None:intergenic
CGTCACCGGCGCTGGTATGA+AGG 0.491895 3_4:+73741412 Msa0521100:CDS
GTTGCCAAGTACTCTGCGTT+AGG 0.491986 3_4:+73741623 Msa0521100:CDS
ACTGAGACGAGGAAGCTTGA+AGG 0.495890 3_4:+73745246 Msa0521100:three_prime_UTR
GTTTCACCAGGGGAAGGTAC+AGG 0.498577 3_4:+73743828 Msa0521100:CDS
AGTACTGAGGTTGTGTCACC+AGG 0.501554 3_4:-73744324 None:intergenic
CCATTACTGCTTCCATTGCA+TGG 0.504180 3_4:-73742509 None:intergenic
AGGACGGGAGAGCCATTGAC+CGG 0.509843 3_4:-73741354 None:intergenic
GTTCTGTGAAATGGTGGAGT+GGG 0.511127 3_4:-73741163 None:intergenic
AAGCGGTGAGGCAACAGCGG+AGG 0.511964 3_4:+73741442 Msa0521100:CDS
GCAAATTTAAGATTATGAAA+AGG 0.513629 3_4:-73745035 None:intergenic
GTTTCGGTGGAGGACAGGAC+GGG 0.513862 3_4:-73741369 None:intergenic
CTGCTTCCATTGCATGGACT+CGG 0.514678 3_4:-73742503 None:intergenic
TTGACCGGAGGATTGGGAAC+CGG 0.515320 3_4:-73741339 None:intergenic
TGTTGCCTCACCGCTTTCCT+CGG 0.515416 3_4:-73741435 None:intergenic
GTATCAATAAATGGTTAGAA+AGG 0.520381 3_4:-73740974 None:intergenic
ACTTATTTCTAATTCAAGAT+CGG 0.521991 3_4:-73745070 None:intergenic
TCATTCTCTGTTAGAACAAG+AGG 0.524064 3_4:-73743951 None:intergenic
GGTGTCGAGGTTGCGAAGAA+GGG 0.525959 3_4:-73741255 None:intergenic
GAAAATTGTGGACATAAGAG+AGG 0.527462 3_4:+73744269 Msa0521100:CDS
GGTGTCGAGGTTGAGGAAGT+TGG 0.532035 3_4:-73741315 None:intergenic
ATTGGGAACCGGCGGTGTCG+AGG 0.533014 3_4:-73741328 None:intergenic
AGCTATTGATTCATGGTGAA+GGG 0.536452 3_4:-73741108 None:intergenic
GATGGTTCAGATAATAGTAT+GGG 0.538925 3_4:+73743918 Msa0521100:CDS
CGTTGAAGAGCAAGCGCAAG+AGG 0.539470 3_4:+73744989 Msa0521100:CDS
CTCGGCCTTCATACCAGCGC+CGG 0.539817 3_4:-73741417 None:intergenic
GGTTTCGGTGGAGGACAGGA+CGG 0.540180 3_4:-73741370 None:intergenic
GGAAGAGGATAAGGCAAGGT+TGG 0.540633 3_4:+73744873 Msa0521100:intron
GTTGTTGTTCTGTGAAATGG+TGG 0.541053 3_4:-73741169 None:intergenic
GAGTGGTGAGGATCGGAGGT+TGG 0.542790 3_4:-73741200 None:intergenic
CCTCAGTACTTAAAGATTGG+TGG 0.548243 3_4:+73744337 Msa0521100:CDS
GAAAGAGTGGTGAGGATCGG+AGG 0.551627 3_4:-73741204 None:intergenic
ATCGACGACGTCACCGGCGC+TGG 0.555704 3_4:+73741404 Msa0521100:CDS
GGTTAGAAAGGAGATTGGAC+AGG 0.556984 3_4:-73740962 None:intergenic
GAATTAGAAATAAGTAATGC+AGG 0.558191 3_4:+73745078 Msa0521100:CDS
AGAACCAAACCCTTATATCA+TGG 0.559837 3_4:+73745146 Msa0521100:three_prime_UTR
AGCGGTGAGGCAACAGCGGA+GGG 0.559972 3_4:+73741443 Msa0521100:CDS
CGGCGCTGGTATGAAGGCCG+AGG 0.563738 3_4:+73741418 Msa0521100:CDS
AGAGAATGAGAGGTCCCTCA+TGG 0.567340 3_4:+73743965 Msa0521100:CDS
ATAACTGGTTTATCAATCAA+AGG 0.567448 3_4:+73744929 Msa0521100:CDS
TAGCTATTGATTCATGGTGA+AGG 0.567933 3_4:-73741109 None:intergenic
TGTTCTGTGAAATGGTGGAG+TGG 0.567991 3_4:-73741164 None:intergenic
CAAGGTTGGTGCAAGAAACC+GGG 0.570646 3_4:+73744887 Msa0521100:CDS
ACCGCCGGTTCCCAATCCTC+CGG 0.570735 3_4:+73741335 Msa0521100:CDS
CAGCTGCAGCTGCAGCACCT+AGG 0.571350 3_4:+73745273 Msa0521100:three_prime_UTR
GAAGTCATCGACGACGTCAC+CGG 0.571705 3_4:+73741398 Msa0521100:CDS
TTCCTCAACCTCGACACCGC+CGG 0.572536 3_4:+73741320 Msa0521100:CDS
TGACTTCGCTGTGGTTTCGG+TGG 0.576108 3_4:-73741382 None:intergenic
GGTTTATCAATCAAAGGAAG+AGG 0.579093 3_4:+73744935 Msa0521100:CDS
TTGGAAAGAGTGGTGAGGAT+CGG 0.583594 3_4:-73741207 None:intergenic
GGACAGGAAATGGAAAGAAG+AGG 0.586326 3_4:-73740946 None:intergenic
CCACCAATCTTTAAGTACTG+AGG 0.588799 3_4:-73744337 None:intergenic
ATTCTCAATCTCAAACACTC+TGG 0.590285 3_4:-73745486 None:intergenic
AAAGGTAAAATACCATGAAG+TGG 0.598924 3_4:-73741688 None:intergenic
TAGGTGCAGTTTGGAAAGAG+TGG 0.600373 3_4:-73741217 None:intergenic
TGGCGTTGACGTTGGTGTCG+AGG 0.601937 3_4:-73741268 None:intergenic
GGGTTATAAAGAGAAAATTG+TGG 0.610746 3_4:+73744257 Msa0521100:intron
TTGTTCTAACAGAGAATGAG+AGG 0.611125 3_4:+73743955 Msa0521100:CDS
TGTGGCGGTGGCGTTGACGT+TGG 0.611369 3_4:-73741276 None:intergenic
GCTATTGATTCATGGTGAAG+GGG 0.615964 3_4:-73741107 None:intergenic
GGTTCAGATAATAGTATGGG+AGG 0.618510 3_4:+73743921 Msa0521100:CDS
GATGTTAATCTGTTTGATGG+AGG 0.621633 3_4:+73743891 Msa0521100:CDS
TGTGTAACAGGAGTTTCACC+AGG 0.621894 3_4:+73743816 Msa0521100:intron
TGGCAGAAAGCGAAACGCAA+AGG 0.622833 3_4:+73741476 Msa0521100:CDS
GATCTGTTTCAATTGCAACC+CGG 0.623157 3_4:-73744905 None:intergenic
ACCGGAGGATTGGGAACCGG+CGG 0.625286 3_4:-73741336 None:intergenic
GGAAAGCGGTGAGGCAACAG+CGG 0.626255 3_4:+73741439 Msa0521100:CDS
GGGCAACTGGTCAACCGGCG+TGG 0.628223 3_4:-73741564 None:intergenic
ATGTCTTACACGTTCCATGA+GGG 0.635061 3_4:-73743979 None:intergenic
ACAGGAGTTTCACCAGGGGA+AGG 0.636992 3_4:+73743822 Msa0521100:intron
ACATGTCCGAGTCCATGCAA+TGG 0.642083 3_4:+73742497 Msa0521100:CDS
ACTGTTGTTGTTGGTTGTGG+CGG 0.642777 3_4:-73741291 None:intergenic
CATGTCTTACACGTTCCATG+AGG 0.645094 3_4:-73743980 None:intergenic
GATAGAAGCTGTTCATACAA+CGG 0.647941 3_4:-73741515 None:intergenic
TACTCTGCGTTAGGACAACA+GGG 0.650241 3_4:+73741632 Msa0521100:CDS
GGTATGAAGGCCGAGGAAAG+CGG 0.652275 3_4:+73741425 Msa0521100:CDS
ACGGGAGAGCCATTGACCGG+AGG 0.652694 3_4:-73741351 None:intergenic
GTGTTTGAGAATCGCCACGC+CGG 0.654940 3_4:+73741550 Msa0521100:CDS
TTCAGGAAGAGGATAAGGCA+AGG 0.655439 3_4:+73744869 Msa0521100:intron
AGTTGCTACTAGCTAGTGTG+TGG 0.669965 3_4:-73741035 None:intergenic
AATGCAGGTGATAAAAGTGA+CGG 0.675503 3_4:+73745093 Msa0521100:CDS
GGTGGCAATCACATTCAAAG+TGG 0.680210 3_4:+73744355 Msa0521100:CDS
GCAGTTTGGAAAGAGTGGTG+AGG 0.695329 3_4:-73741212 None:intergenic
CGTCGTCGATGACTTCGCTG+TGG 0.697602 3_4:-73741391 None:intergenic
GTGTAACAGGAGTTTCACCA+GGG 0.706920 3_4:+73743817 Msa0521100:intron
ACCAAACCCTTATATCATGG+TGG 0.707203 3_4:+73745149 Msa0521100:three_prime_UTR
GAAGGCCGAGGAAAGCGGTG+AGG 0.708487 3_4:+73741430 Msa0521100:CDS
ACAGAGTTAAAACTGAGACG+AGG 0.728174 3_4:+73745235 Msa0521100:three_prime_UTR
TGTAACAGGAGTTTCACCAG+GGG 0.775474 3_4:+73743818 Msa0521100:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAATAAAAATAAAAT+TGG + chr3_4:73745417-73745436 Msa0521100:three_prime_UTR 0.0%
!!! AATTACAATATTTTTTTGTA+TGG + chr3_4:73742192-73742211 Msa0521100:intron 10.0%
!! TAAAAATAATAATGATTAGT+GGG - chr3_4:73744822-73744841 None:intergenic 10.0%
!! TTTGTAAATATTATTGAGAA+AGG - chr3_4:73741709-73741728 None:intergenic 15.0%
!!! AATTTTCTGCAATAATATTT+TGG + chr3_4:73742248-73742267 Msa0521100:intron 15.0%
!!! TATTTTTTATTTTTTTGTCG+TGG + chr3_4:73742326-73742345 Msa0521100:intron 15.0%
!!! AAGTTTTTATAGGAAAAAAT+AGG + chr3_4:73742707-73742726 Msa0521100:intron 15.0%
!!! ATTTATACTTTTCTCAATAT+AGG + chr3_4:73742801-73742820 Msa0521100:intron 15.0%
!! AATGATAATTAAGATCTTAA+TGG + chr3_4:73742900-73742919 Msa0521100:intron 15.0%
!! CTAATAAATTATTCATTATG+TGG - chr3_4:73743535-73743554 None:intergenic 15.0%
!! AATTTATTAGTAAGATAGAA+TGG + chr3_4:73743545-73743564 Msa0521100:intron 15.0%
!! CTAAAAATAATAATGATTAG+TGG - chr3_4:73744823-73744842 None:intergenic 15.0%
!! AATAAAAATAAAATTGGTAG+AGG + chr3_4:73745423-73745442 Msa0521100:three_prime_UTR 15.0%
!!! CTTTCAATTACTATTTTTTT+TGG - chr3_4:73745584-73745603 None:intergenic 15.0%
!!! TTATATGGAGTATCAATAAA+TGG - chr3_4:73740986-73741005 None:intergenic 20.0%
!! ATCAATAGCTATCTATATTA+TGG + chr3_4:73741121-73741140 Msa0521100:exon 20.0%
!!! GCAAAACTTAAATTTTAACT+CGG + chr3_4:73741858-73741877 Msa0521100:intron 20.0%
!! AAAATAATTAAGGTAGCTAA+TGG + chr3_4:73742021-73742040 Msa0521100:intron 20.0%
!! TATGTTAAAATAAGCTCAAA+AGG - chr3_4:73742088-73742107 None:intergenic 20.0%
!!! TACAATATTTTTTTGTATGG+TGG + chr3_4:73742195-73742214 Msa0521100:intron 20.0%
!!! AGAATTTATTTTCTGTTGTA+TGG + chr3_4:73742392-73742411 Msa0521100:intron 20.0%
!! TTCTCAATATAGGAATTATA+CGG + chr3_4:73742811-73742830 Msa0521100:intron 20.0%
!! TCCTGTATATATGAATTATT+TGG + chr3_4:73742973-73742992 Msa0521100:intron 20.0%
!! CCTGTATATATGAATTATTT+GGG + chr3_4:73742974-73742993 Msa0521100:intron 20.0%
!!! ATATATGAATTATTTGGGTT+AGG + chr3_4:73742979-73742998 Msa0521100:intron 20.0%
!!! TATATGAATTATTTGGGTTA+GGG + chr3_4:73742980-73742999 Msa0521100:intron 20.0%
!! TAAATTATTCATGACGTATT+TGG - chr3_4:73743059-73743078 None:intergenic 20.0%
!!! CATATTGATTAATATCCAAT+TGG - chr3_4:73743328-73743347 None:intergenic 20.0%
!! ATTATTCATTATGTGGTTTA+AGG - chr3_4:73743528-73743547 None:intergenic 20.0%
!! AAATAACATGCTAAAAAGTA+AGG - chr3_4:73743658-73743677 None:intergenic 20.0%
!! AATTAGTACTCATATCTAAT+GGG - chr3_4:73743775-73743794 None:intergenic 20.0%
!! TAATTAGTACTCATATCTAA+TGG - chr3_4:73743776-73743795 None:intergenic 20.0%
!! GATTACATTAAATGTTGAAT+AGG + chr3_4:73744040-73744059 Msa0521100:intron 20.0%
!!! GCAAATTTAAGATTATGAAA+AGG - chr3_4:73745038-73745057 None:intergenic 20.0%
!!! ACTTATTTCTAATTCAAGAT+CGG - chr3_4:73745073-73745092 None:intergenic 20.0%
!! ACGTTAATGTGTTAAATATT+GGG - chr3_4:73745380-73745399 None:intergenic 20.0%
!!! TTGAGATTGAGAATTTTATA+AGG + chr3_4:73745495-73745514 Msa0521100:three_prime_UTR 20.0%
! GTATCAATAAATGGTTAGAA+AGG - chr3_4:73740977-73740996 None:intergenic 25.0%
! TGATGAATGAACAACTTATA+TGG - chr3_4:73741001-73741020 None:intergenic 25.0%
!!! TATAGATAGCTATTGATTCA+TGG - chr3_4:73741118-73741137 None:intergenic 25.0%
!!! CAATTTCACTTTTGCAAAAA+AGG - chr3_4:73741903-73741922 None:intergenic 25.0%
!! ACTGAAAATAAGTCTAAAGT+AGG + chr3_4:73741978-73741997 Msa0521100:intron 25.0%
!!! TTTCTGCAATAATATTTTGG+CGG + chr3_4:73742251-73742270 Msa0521100:intron 25.0%
! AAAACATAATTACACTCCAT+TGG - chr3_4:73742307-73742326 None:intergenic 25.0%
!! TATTTTCTGTTGTATGGTTA+CGG + chr3_4:73742398-73742417 Msa0521100:intron 25.0%
! AGGAATAAGCAACAAAAATT+TGG - chr3_4:73742667-73742686 None:intergenic 25.0%
! CATTCGTGTAATTTATCTTT+AGG - chr3_4:73742687-73742706 None:intergenic 25.0%
!! TACACGAATGAAGTTTTTAT+AGG + chr3_4:73742697-73742716 Msa0521100:intron 25.0%
! TCTCAATATAGGAATTATAC+GGG + chr3_4:73742812-73742831 Msa0521100:intron 25.0%
! TGTAAGAAAATTTGAAAAGG+AGG - chr3_4:73742849-73742868 None:intergenic 25.0%
! GCTTGTAAGAAAATTTGAAA+AGG - chr3_4:73742852-73742871 None:intergenic 25.0%
! TAATTCATATATACAGGACA+AGG - chr3_4:73742971-73742990 None:intergenic 25.0%
! CCCAAATAATTCATATATAC+AGG - chr3_4:73742977-73742996 None:intergenic 25.0%
! ACAATTCTGTCAAAAAAACA+AGG - chr3_4:73743206-73743225 None:intergenic 25.0%
! AAAGTCCAAACAATTCATAT+GGG - chr3_4:73743452-73743471 None:intergenic 25.0%
! ATATGAATTGTTTGGACTTT+GGG + chr3_4:73743452-73743471 Msa0521100:intron 25.0%
! AACATCATAGTTATACTGTA+TGG + chr3_4:73743598-73743617 Msa0521100:intron 25.0%
! AATTCTGTCAAAAAAAAGCA+AGG - chr3_4:73743633-73743652 None:intergenic 25.0%
! GTATCTATATTCAAAGTACA+TGG - chr3_4:73743691-73743710 None:intergenic 25.0%
! AACATTTAATGTAATCCATG+AGG - chr3_4:73744036-73744055 None:intergenic 25.0%
! CATTAAATGTTGAATAGGAA+AGG + chr3_4:73744045-73744064 Msa0521100:intron 25.0%
!!! GTATGTTTTGAATCTGAAAA+AGG - chr3_4:73744435-73744454 None:intergenic 25.0%
! TTTCAGATTCAAAACATACT+TGG + chr3_4:73744436-73744455 Msa0521100:intron 25.0%
! AAGCTATCTTAGATATCTTA+CGG + chr3_4:73744666-73744685 Msa0521100:intron 25.0%
!! AACATTTTATAGATCCAATC+AGG + chr3_4:73744704-73744723 Msa0521100:intron 25.0%
! TAAATATTTGAGAACCTGAT+TGG - chr3_4:73744721-73744740 None:intergenic 25.0%
!!! AACATGTGAACTATTTTGAA+TGG - chr3_4:73744769-73744788 None:intergenic 25.0%
! AATTGAAACAGATCAATAAC+TGG + chr3_4:73744914-73744933 Msa0521100:CDS 25.0%
!! ATAACTGGTTTATCAATCAA+AGG + chr3_4:73744929-73744948 Msa0521100:CDS 25.0%
! GAATTAGAAATAAGTAATGC+AGG + chr3_4:73745078-73745097 Msa0521100:CDS 25.0%
! GACGTTAATGTGTTAAATAT+TGG - chr3_4:73745381-73745400 None:intergenic 25.0%
TAAATGGTTAGAAAGGAGAT+TGG - chr3_4:73740970-73740989 None:intergenic 30.0%
AAGAAATGGAGAAAAAAGGA+GGG - chr3_4:73741077-73741096 None:intergenic 30.0%
AAAGAAATGGAGAAAAAAGG+AGG - chr3_4:73741078-73741097 None:intergenic 30.0%
GAGAAAGAAATGGAGAAAAA+AGG - chr3_4:73741081-73741100 None:intergenic 30.0%
AAAGGTAAAATACCATGAAG+TGG - chr3_4:73741691-73741710 None:intergenic 30.0%
! TGTCAATTAATGGATGGAAA+TGG + chr3_4:73741774-73741793 Msa0521100:intron 30.0%
! TTAATGGATGGAAATGGATT+TGG + chr3_4:73741780-73741799 Msa0521100:intron 30.0%
AAGTGAAATTGAAACATGCA+CGG + chr3_4:73741912-73741931 Msa0521100:intron 30.0%
GTCATTCATGCATAGTAATA+GGG - chr3_4:73741960-73741979 None:intergenic 30.0%
AGTCATTCATGCATAGTAAT+AGG - chr3_4:73741961-73741980 None:intergenic 30.0%
!!! CCTTTTGAGCTTATTTTAAC+CGG + chr3_4:73742085-73742104 Msa0521100:intron 30.0%
TTTATGTATAGAAGCTTGCA+TGG - chr3_4:73742278-73742297 None:intergenic 30.0%
TATACATAAATCCTTGCCAA+TGG + chr3_4:73742288-73742307 Msa0521100:intron 30.0%
AAATTTGTGTCTACAGTAAC+TGG - chr3_4:73742361-73742380 None:intergenic 30.0%
! GTTACTGTAGACACAAATTT+TGG + chr3_4:73742361-73742380 Msa0521100:intron 30.0%
CTCAATATAGGAATTATACG+GGG + chr3_4:73742813-73742832 Msa0521100:intron 30.0%
!! TTAATGGTTGATAGTCAAAG+AGG + chr3_4:73742916-73742935 Msa0521100:intron 30.0%
ATTCATGACGTATTTGGTAT+AGG - chr3_4:73743053-73743072 None:intergenic 30.0%
GCTGTTATAGTTATACTGTA+TGG + chr3_4:73743171-73743190 Msa0521100:intron 30.0%
TCAAAAAAACAAGGACAACT+GGG - chr3_4:73743197-73743216 None:intergenic 30.0%
! TTTCTTGGTGGATAATAGTT+TGG - chr3_4:73743253-73743272 None:intergenic 30.0%
ACAAGTTAGCTAATCTTTCT+TGG - chr3_4:73743268-73743287 None:intergenic 30.0%
!!! CATACATCACTTTTTCCAAT+TGG + chr3_4:73743310-73743329 Msa0521100:intron 30.0%
AGTAATAATCAAGCCCTTAA+TGG + chr3_4:73743374-73743393 Msa0521100:intron 30.0%
CTTTGACTATCAACCATTAA+GGG - chr3_4:73742916-73742935 None:intergenic 30.0%
CAAAGTCCAAACAATTCATA+TGG - chr3_4:73743453-73743472 None:intergenic 30.0%
CATATGAATTGTTTGGACTT+TGG + chr3_4:73743451-73743470 Msa0521100:intron 30.0%
AAAAAAAAGCAAGGACAACT+GGG - chr3_4:73743624-73743643 None:intergenic 30.0%
ATTCAAAGTACATGGTAGTT+TGG - chr3_4:73743683-73743702 None:intergenic 30.0%
AGTGATGTTAATCTGTTTGA+TGG + chr3_4:73743888-73743907 Msa0521100:CDS 30.0%
GATGGTTCAGATAATAGTAT+GGG + chr3_4:73743918-73743937 Msa0521100:CDS 30.0%
! ATTAAAGCATGAGTTGAAAC+AGG + chr3_4:73744004-73744023 Msa0521100:CDS 30.0%
TGTGTTGAAACTTGAAATGA+TGG - chr3_4:73744112-73744131 None:intergenic 30.0%
GGGTTATAAAGAGAAAATTG+TGG + chr3_4:73744257-73744276 Msa0521100:intron 30.0%
CAATATAGAGTTCTTACAGT+AGG - chr3_4:73744387-73744406 None:intergenic 30.0%
GATCCAACAAAGTAAATGAT+AGG + chr3_4:73745177-73745196 Msa0521100:three_prime_UTR 30.0%
TCACCTATCATTTACTTTGT+TGG - chr3_4:73745183-73745202 None:intergenic 30.0%
! TAAACTTTTTGTTGCATCCT+AGG - chr3_4:73745293-73745312 None:intergenic 30.0%
!! AGCTATTGATTCATGGTGAA+GGG - chr3_4:73741111-73741130 None:intergenic 35.0%
!! TAGCTATTGATTCATGGTGA+AGG - chr3_4:73741112-73741131 None:intergenic 35.0%
! GTTGTTGTTGTTCTGTGAAA+TGG - chr3_4:73741175-73741194 None:intergenic 35.0%
GAAACGCAAAGGTGAAATAA+TGG + chr3_4:73741487-73741506 Msa0521100:CDS 35.0%
ATAGAAGCTGTTCATACAAC+GGG - chr3_4:73741517-73741536 None:intergenic 35.0%
GATAGAAGCTGTTCATACAA+CGG - chr3_4:73741518-73741537 None:intergenic 35.0%
AAGCTTTGCGTGTCAATTAA+TGG + chr3_4:73741764-73741783 Msa0521100:intron 35.0%
TTTGCGTGTCAATTAATGGA+TGG + chr3_4:73741768-73741787 Msa0521100:intron 35.0%
! TGGAAAATTTTCTCTCTCTC+TGG + chr3_4:73741800-73741819 Msa0521100:intron 35.0%
TCATGCATAGTAATAGGGAA+AGG - chr3_4:73741955-73741974 None:intergenic 35.0%
CATGTTAAGATAGGCTCAAA+AGG - chr3_4:73742058-73742077 None:intergenic 35.0%
GGTCAAGTTCATGTTAAGAT+AGG - chr3_4:73742067-73742086 None:intergenic 35.0%
CCGGTTAAAATAAGCTCAAA+AGG - chr3_4:73742118-73742137 None:intergenic 35.0%
TTTAACCGGCATGTTTATGT+AGG + chr3_4:73742129-73742148 Msa0521100:intron 35.0%
TTAACCGGCATGTTTATGTA+GGG + chr3_4:73742130-73742149 Msa0521100:intron 35.0%
ATAATTACACTCCATTGGCA+AGG - chr3_4:73742302-73742321 None:intergenic 35.0%
TGTACCTGTTAGACTTTGTA+AGG - chr3_4:73742556-73742575 None:intergenic 35.0%
! GTATGTTTTCGGTTCAGTAT+AGG + chr3_4:73742752-73742771 Msa0521100:intron 35.0%
GTCAAAAAAACAAGGACAAC+TGG - chr3_4:73743198-73743217 None:intergenic 35.0%
ATAATAACATGCTACGAGCA+TGG - chr3_4:73743229-73743248 None:intergenic 35.0%
AGTTAGCTAATCTTTCTTGG+TGG - chr3_4:73743265-73743284 None:intergenic 35.0%
CCTTTGACTATCAACCATTA+AGG - chr3_4:73743391-73743410 None:intergenic 35.0%
!! CCTTAATGGTTGATAGTCAA+AGG + chr3_4:73743388-73743407 Msa0521100:intron 35.0%
!! TAATGGTTGATAGTCAAAGG+AGG + chr3_4:73743391-73743410 Msa0521100:intron 35.0%
CAAACAATTCATATGGGACA+AGG - chr3_4:73743446-73743465 None:intergenic 35.0%
CTTGTCCCATATGAATTGTT+TGG + chr3_4:73743444-73743463 Msa0521100:intron 35.0%
! AATTGTTTGGACTTTGGGTT+AGG + chr3_4:73743457-73743476 Msa0521100:intron 35.0%
! ATTGTTTGGACTTTGGGTTA+GGG + chr3_4:73743458-73743477 Msa0521100:intron 35.0%
CAAAAAAAAGCAAGGACAAC+TGG - chr3_4:73743625-73743644 None:intergenic 35.0%
TTTATCTCCACATGTGTAAC+AGG + chr3_4:73743804-73743823 Msa0521100:intron 35.0%
GATGTTAATCTGTTTGATGG+AGG + chr3_4:73743891-73743910 Msa0521100:CDS 35.0%
TAATCTGTTTGATGGAGGTT+TGG + chr3_4:73743896-73743915 Msa0521100:CDS 35.0%
GGATGGTTCAGATAATAGTA+TGG + chr3_4:73743917-73743936 Msa0521100:CDS 35.0%
GATAATAGTATGGGAGGATT+TGG + chr3_4:73743927-73743946 Msa0521100:CDS 35.0%
TCATTCTCTGTTAGAACAAG+AGG - chr3_4:73743954-73743973 None:intergenic 35.0%
TTGTTCTAACAGAGAATGAG+AGG + chr3_4:73743955-73743974 Msa0521100:CDS 35.0%
CCATTCTCTAATACACGTTT+CGG - chr3_4:73744219-73744238 None:intergenic 35.0%
CGAAACGTGTATTAGAGAAT+GGG + chr3_4:73744217-73744236 Msa0521100:intron 35.0%
!!! TGGGTTGCTCTTATTTTTGT+AGG + chr3_4:73744236-73744255 Msa0521100:intron 35.0%
!!! GGGTTGCTCTTATTTTTGTA+GGG + chr3_4:73744237-73744256 Msa0521100:intron 35.0%
GAAAATTGTGGACATAAGAG+AGG + chr3_4:73744269-73744288 Msa0521100:CDS 35.0%
CAACCTCAGTACTTAAAGAT+TGG + chr3_4:73744334-73744353 Msa0521100:CDS 35.0%
AGAGTTCTTACAGTAGGATA+AGG - chr3_4:73744381-73744400 None:intergenic 35.0%
GGTTTATCAATCAAAGGAAG+AGG + chr3_4:73744935-73744954 Msa0521100:CDS 35.0%
TTCAACGCATTAGAAGTTGA+AGG - chr3_4:73744976-73744995 None:intergenic 35.0%
AATGCAGGTGATAAAAGTGA+CGG + chr3_4:73745093-73745112 Msa0521100:CDS 35.0%
ACGGTCGTTACATGTAAAAA+TGG + chr3_4:73745112-73745131 Msa0521100:exon 35.0%
AGAACCAAACCCTTATATCA+TGG + chr3_4:73745146-73745165 Msa0521100:three_prime_UTR 35.0%
ATTCTCAATCTCAAACACTC+TGG - chr3_4:73745489-73745508 None:intergenic 35.0%
AAAGGAGATTGGACAGGAAA+TGG - chr3_4:73740959-73740978 None:intergenic 40.0%
AGAAAAAAGGAGGGAAGAGA+GGG - chr3_4:73741068-73741087 None:intergenic 40.0%
GGGGAATAGAGAGAAAGAAA+TGG - chr3_4:73741091-73741110 None:intergenic 40.0%
!! GCTATTGATTCATGGTGAAG+GGG - chr3_4:73741110-73741129 None:intergenic 40.0%
! GTTGTTGTTCTGTGAAATGG+TGG - chr3_4:73741172-73741191 None:intergenic 40.0%
!! GAAGTTGGTACTGTTGTTGT+TGG - chr3_4:73741303-73741322 None:intergenic 40.0%
TAAACAACTCGACCACTTCA+TGG + chr3_4:73741676-73741695 Msa0521100:CDS 40.0%
AACTCCCTACATAAACATGC+CGG - chr3_4:73742137-73742156 None:intergenic 40.0%
CAGTCCTTACAAAGTCTAAC+AGG + chr3_4:73742549-73742568 Msa0521100:CDS 40.0%
ACTGAACCGAAAACATACTG+CGG - chr3_4:73742750-73742769 None:intergenic 40.0%
TATCCCAATATGAGACCCTA+TGG - chr3_4:73742778-73742797 None:intergenic 40.0%
TCAAAGAGGAACATGACTAC+AGG + chr3_4:73742930-73742949 Msa0521100:intron 40.0%
TGATAGTCAAAGGAGGAACA+TGG + chr3_4:73743398-73743417 Msa0521100:intron 40.0%
CAATTCATATGGGACAAGGA+AGG - chr3_4:73743442-73743461 None:intergenic 40.0%
TGAAACTCCTGTTACACATG+TGG - chr3_4:73743814-73743833 None:intergenic 40.0%
GGTTCAGATAATAGTATGGG+AGG + chr3_4:73743921-73743940 Msa0521100:CDS 40.0%
ATGTCTTACACGTTCCATGA+GGG - chr3_4:73743982-73744001 None:intergenic 40.0%
! AGCATGAGTTGAAACAGGTA+CGG + chr3_4:73744009-73744028 Msa0521100:intron 40.0%
CCGAAACGTGTATTAGAGAA+TGG + chr3_4:73744216-73744235 Msa0521100:intron 40.0%
! CCACCAATCTTTAAGTACTG+AGG - chr3_4:73744340-73744359 None:intergenic 40.0%
CCTCAGTACTTAAAGATTGG+TGG + chr3_4:73744337-73744356 Msa0521100:CDS 40.0%
GCTTGATCATAGACAAGCAA+GGG - chr3_4:73744535-73744554 None:intergenic 40.0%
TGCTTGATCATAGACAAGCA+AGG - chr3_4:73744536-73744555 None:intergenic 40.0%
GATATGTGTTTGTGCCTTTC+AGG + chr3_4:73744852-73744871 Msa0521100:intron 40.0%
GATCTGTTTCAATTGCAACC+CGG - chr3_4:73744908-73744927 None:intergenic 40.0%
TCAATCAAAGGAAGAGGAAC+TGG + chr3_4:73744941-73744960 Msa0521100:CDS 40.0%
ACCAAACCCTTATATCATGG+TGG + chr3_4:73745149-73745168 Msa0521100:three_prime_UTR 40.0%
ACAGAGTTAAAACTGAGACG+AGG + chr3_4:73745235-73745254 Msa0521100:three_prime_UTR 40.0%
GGACAGGAAATGGAAAGAAG+AGG - chr3_4:73740949-73740968 None:intergenic 45.0%
GGTTAGAAAGGAGATTGGAC+AGG - chr3_4:73740965-73740984 None:intergenic 45.0%
AGTTGCTACTAGCTAGTGTG+TGG - chr3_4:73741038-73741057 None:intergenic 45.0%
GAGAAAAAAGGAGGGAAGAG+AGG - chr3_4:73741069-73741088 None:intergenic 45.0%
! GTTCTGTGAAATGGTGGAGT+GGG - chr3_4:73741166-73741185 None:intergenic 45.0%
! TGTTCTGTGAAATGGTGGAG+TGG - chr3_4:73741167-73741186 None:intergenic 45.0%
TTGGAAAGAGTGGTGAGGAT+CGG - chr3_4:73741210-73741229 None:intergenic 45.0%
TAGGTGCAGTTTGGAAAGAG+TGG - chr3_4:73741220-73741239 None:intergenic 45.0%
CTTTCCAAACTGCACCTAAC+TGG + chr3_4:73741222-73741241 Msa0521100:CDS 45.0%
! ACTGTTGTTGTTGGTTGTGG+CGG - chr3_4:73741294-73741313 None:intergenic 45.0%
! GGTACTGTTGTTGTTGGTTG+TGG - chr3_4:73741297-73741316 None:intergenic 45.0%
! TTGTCCTAACGCAGAGTACT+TGG - chr3_4:73741630-73741649 None:intergenic 45.0%
TACTCTGCGTTAGGACAACA+GGG + chr3_4:73741632-73741651 Msa0521100:CDS 45.0%
! TTTTCTCTCTCTCTGGACTC+TGG + chr3_4:73741807-73741826 Msa0521100:intron 45.0%
TTTCTCTCTCTCTGGACTCT+GGG + chr3_4:73741808-73741827 Msa0521100:intron 45.0%
CCATTACTGCTTCCATTGCA+TGG - chr3_4:73742512-73742531 None:intergenic 45.0%
CCATGCAATGGAAGCAGTAA+TGG + chr3_4:73742509-73742528 Msa0521100:CDS 45.0%
! TGGAAGCAGTAATGGCTTGT+TGG + chr3_4:73742517-73742536 Msa0521100:CDS 45.0%
!! GGAAGCAGTAATGGCTTGTT+GGG + chr3_4:73742518-73742537 Msa0521100:CDS 45.0%
TTCGGTTCAGTATAGGCCAT+AGG + chr3_4:73742759-73742778 Msa0521100:intron 45.0%
TCGGTTCAGTATAGGCCATA+GGG + chr3_4:73742760-73742779 Msa0521100:intron 45.0%
TAGGCCATAGGGTCTCATAT+TGG + chr3_4:73742771-73742790 Msa0521100:intron 45.0%
AGGCCATAGGGTCTCATATT+GGG + chr3_4:73742772-73742791 Msa0521100:intron 45.0%
TGTGTAACAGGAGTTTCACC+AGG + chr3_4:73743816-73743835 Msa0521100:intron 45.0%
GTGTAACAGGAGTTTCACCA+GGG + chr3_4:73743817-73743836 Msa0521100:intron 45.0%
TGTAACAGGAGTTTCACCAG+GGG + chr3_4:73743818-73743837 Msa0521100:intron 45.0%
CTGTTTGATGGAGGTTTGGA+TGG + chr3_4:73743900-73743919 Msa0521100:CDS 45.0%
CATGTCTTACACGTTCCATG+AGG - chr3_4:73743983-73744002 None:intergenic 45.0%
! ATTTTACGCAAGAGACGAGC+TGG + chr3_4:73744294-73744313 Msa0521100:CDS 45.0%
GGTGGCAATCACATTCAAAG+TGG + chr3_4:73744355-73744374 Msa0521100:CDS 45.0%
TGTTTGTGCCTTTCAGGAAG+AGG + chr3_4:73744858-73744877 Msa0521100:intron 45.0%
TGCCTTTCAGGAAGAGGATA+AGG + chr3_4:73744864-73744883 Msa0521100:intron 45.0%
TGCCTTATCCTCTTCCTGAA+AGG - chr3_4:73744869-73744888 None:intergenic 45.0%
TTCAGGAAGAGGATAAGGCA+AGG + chr3_4:73744869-73744888 Msa0521100:intron 45.0%
GCCACCATGATATAAGGGTT+TGG - chr3_4:73745153-73745172 None:intergenic 45.0%
CTGCTGCCACCATGATATAA+GGG - chr3_4:73745158-73745177 None:intergenic 45.0%
TCTGCTGCCACCATGATATA+AGG - chr3_4:73745159-73745178 None:intergenic 45.0%
!! CTTATTAATTAAAATAATTA+AGG + chr3_4:73742011-73742030 Msa0521100:intron 5.0%
!! AATAATTTATAATGATATAA+TGG + chr3_4:73743070-73743089 Msa0521100:intron 5.0%
!!! TTTATTTTTATTTTTTTGAA+AGG - chr3_4:73745409-73745428 None:intergenic 5.0%
!! AATGGTGGAGTGGGTTGTCT+TGG - chr3_4:73741157-73741176 None:intergenic 50.0%
GCAGTTTGGAAAGAGTGGTG+AGG - chr3_4:73741215-73741234 None:intergenic 50.0%
TGAGCCAGTTAGGTGCAGTT+TGG - chr3_4:73741229-73741248 None:intergenic 50.0%
CGATGACTTCGCTGTGGTTT+CGG - chr3_4:73741388-73741407 None:intergenic 50.0%
TGGCAGAAAGCGAAACGCAA+AGG + chr3_4:73741476-73741495 Msa0521100:CDS 50.0%
GTTGCCAAGTACTCTGCGTT+AGG + chr3_4:73741623-73741642 Msa0521100:CDS 50.0%
GTACTCTGCGTTAGGACAAC+AGG + chr3_4:73741631-73741650 Msa0521100:CDS 50.0%
CATGGACTCGGACATGTTGT+TGG - chr3_4:73742494-73742513 None:intergenic 50.0%
ACATGTCCGAGTCCATGCAA+TGG + chr3_4:73742497-73742516 Msa0521100:CDS 50.0%
CTGCTTCCATTGCATGGACT+CGG - chr3_4:73742506-73742525 None:intergenic 50.0%
! CTGCTGCCGCAGTATGTTTT+CGG + chr3_4:73742741-73742760 Msa0521100:intron 50.0%
CAAAGGAGGAACATGGCTAC+AGG + chr3_4:73743405-73743424 Msa0521100:intron 50.0%
AGAGAATGAGAGGTCCCTCA+TGG + chr3_4:73743965-73743984 Msa0521100:CDS 50.0%
TGAAACAGGTACGGTCCTCA+TGG + chr3_4:73744018-73744037 Msa0521100:intron 50.0%
AGACGAGCTGGAAAACTTCC+TGG + chr3_4:73744306-73744325 Msa0521100:CDS 50.0%
! AGTACTGAGGTTGTGTCACC+AGG - chr3_4:73744327-73744346 None:intergenic 50.0%
GGAAGAGGATAAGGCAAGGT+TGG + chr3_4:73744873-73744892 Msa0521100:intron 50.0%
!! GCAAGGTTGGTGCAAGAAAC+CGG + chr3_4:73744886-73744905 Msa0521100:CDS 50.0%
!! CAAGGTTGGTGCAAGAAACC+GGG + chr3_4:73744887-73744906 Msa0521100:CDS 50.0%
ACTGAGACGAGGAAGCTTGA+AGG + chr3_4:73745246-73745265 Msa0521100:three_prime_UTR 50.0%
GAAAGAGTGGTGAGGATCGG+AGG - chr3_4:73741207-73741226 None:intergenic 55.0%
!! AGGGCGTTGTTGAGCCAGTT+AGG - chr3_4:73741239-73741258 None:intergenic 55.0%
! GGTGTCGAGGTTGCGAAGAA+GGG - chr3_4:73741258-73741277 None:intergenic 55.0%
! TGGTGTCGAGGTTGCGAAGA+AGG - chr3_4:73741259-73741278 None:intergenic 55.0%
! GTTGTTGTTGGTTGTGGCGG+TGG - chr3_4:73741291-73741310 None:intergenic 55.0%
! GGTGTCGAGGTTGAGGAAGT+TGG - chr3_4:73741318-73741337 None:intergenic 55.0%
TTGACCGGAGGATTGGGAAC+CGG - chr3_4:73741342-73741361 None:intergenic 55.0%
GTTCCCAATCCTCCGGTCAA+TGG + chr3_4:73741342-73741361 Msa0521100:CDS 55.0%
GAGCCATTGACCGGAGGATT+GGG - chr3_4:73741348-73741367 None:intergenic 55.0%
AGAGCCATTGACCGGAGGAT+TGG - chr3_4:73741349-73741368 None:intergenic 55.0%
TGACTTCGCTGTGGTTTCGG+TGG - chr3_4:73741385-73741404 None:intergenic 55.0%
GAAGTCATCGACGACGTCAC+CGG + chr3_4:73741398-73741417 Msa0521100:CDS 55.0%
GGTATGAAGGCCGAGGAAAG+CGG + chr3_4:73741425-73741444 Msa0521100:CDS 55.0%
TGTTGCCTCACCGCTTTCCT+CGG - chr3_4:73741438-73741457 None:intergenic 55.0%
GTGTTTGAGAATCGCCACGC+CGG + chr3_4:73741550-73741569 Msa0521100:CDS 55.0%
ATCCTGGGCAACTGGTCAAC+CGG - chr3_4:73741572-73741591 None:intergenic 55.0%
ATGCGACTGCGACATCAACG+AGG - chr3_4:73742436-73742455 None:intergenic 55.0%
ACAGGAGTTTCACCAGGGGA+AGG + chr3_4:73743822-73743841 Msa0521100:intron 55.0%
! GTTTCACCAGGGGAAGGTAC+AGG + chr3_4:73743828-73743847 Msa0521100:CDS 55.0%
CGTTGAAGAGCAAGCGCAAG+AGG + chr3_4:73744989-73745008 Msa0521100:CDS 55.0%
GAGTGGTGAGGATCGGAGGT+TGG - chr3_4:73741203-73741222 None:intergenic 60.0%
!! TGGCGTTGACGTTGGTGTCG+AGG - chr3_4:73741271-73741290 None:intergenic 60.0%
TTCCTCAACCTCGACACCGC+CGG + chr3_4:73741320-73741339 Msa0521100:CDS 60.0%
AGGACGGGAGAGCCATTGAC+CGG - chr3_4:73741357-73741376 None:intergenic 60.0%
GTTTCGGTGGAGGACAGGAC+GGG - chr3_4:73741372-73741391 None:intergenic 60.0%
GGTTTCGGTGGAGGACAGGA+CGG - chr3_4:73741373-73741392 None:intergenic 60.0%
CTGTGGTTTCGGTGGAGGAC+AGG - chr3_4:73741377-73741396 None:intergenic 60.0%
CTTCGCTGTGGTTTCGGTGG+AGG - chr3_4:73741382-73741401 None:intergenic 60.0%
CGTCGTCGATGACTTCGCTG+TGG - chr3_4:73741394-73741413 None:intergenic 60.0%
GGAAAGCGGTGAGGCAACAG+CGG + chr3_4:73741439-73741458 Msa0521100:CDS 60.0%
CAGCGGAGGGAGTGATGAAC+TGG + chr3_4:73741456-73741475 Msa0521100:CDS 60.0%
CTCTCTCTCTGGACTCTGGG+TGG + chr3_4:73741811-73741830 Msa0521100:intron 60.0%
GTTGCTCCTGTACCTTCCCC+TGG - chr3_4:73743837-73743856 None:intergenic 60.0%
!! TGTGGCGGTGGCGTTGACGT+TGG - chr3_4:73741279-73741298 None:intergenic 65.0%
! AACCGGCGGTGTCGAGGTTG+AGG - chr3_4:73741325-73741344 None:intergenic 65.0%
! ATTGGGAACCGGCGGTGTCG+AGG - chr3_4:73741331-73741350 None:intergenic 65.0%
!! ACCGCCGGTTCCCAATCCTC+CGG + chr3_4:73741335-73741354 Msa0521100:CDS 65.0%
ACCGGAGGATTGGGAACCGG+CGG - chr3_4:73741339-73741358 None:intergenic 65.0%
ACGGGAGAGCCATTGACCGG+AGG - chr3_4:73741354-73741373 None:intergenic 65.0%
!! CGTCACCGGCGCTGGTATGA+AGG + chr3_4:73741412-73741431 Msa0521100:CDS 65.0%
CTCGGCCTTCATACCAGCGC+CGG - chr3_4:73741420-73741439 None:intergenic 65.0%
GAAGGCCGAGGAAAGCGGTG+AGG + chr3_4:73741430-73741449 Msa0521100:CDS 65.0%
AAGCGGTGAGGCAACAGCGG+AGG + chr3_4:73741442-73741461 Msa0521100:CDS 65.0%
AGCGGTGAGGCAACAGCGGA+GGG + chr3_4:73741443-73741462 Msa0521100:CDS 65.0%
!! GAGCGTCGATCCTGGGCAAC+TGG - chr3_4:73741580-73741599 None:intergenic 65.0%
!! GCCAGCTGAGCGTCGATCCT+GGG - chr3_4:73741587-73741606 None:intergenic 65.0%
!! TGCCAGCTGAGCGTCGATCC+TGG - chr3_4:73741588-73741607 None:intergenic 65.0%
CAGCTGCAGCTGCAGCACCT+AGG + chr3_4:73745273-73745292 Msa0521100:three_prime_UTR 65.0%
ATCGACGACGTCACCGGCGC+TGG + chr3_4:73741404-73741423 Msa0521100:CDS 70.0%
!! CGGCGCTGGTATGAAGGCCG+AGG + chr3_4:73741418-73741437 Msa0521100:CDS 70.0%
GGGCAACTGGTCAACCGGCG+TGG - chr3_4:73741567-73741586 None:intergenic 70.0%
! CGCCGGTTGACCAGTTGCCC+AGG + chr3_4:73741567-73741586 Msa0521100:CDS 70.0%
GCCCAGGATCGACGCTCAGC+TGG + chr3_4:73741583-73741602 Msa0521100:CDS 70.0%
! GGTGCTGCAGCTGCAGCTGC+AGG - chr3_4:73745272-73745291 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 73740916 73745648 73740916 ID=Msa0521100;Name=Msa0521100
chr3_4 mRNA 73740916 73745648 73740916 ID=Msa0521100-mRNA-1;Parent=Msa0521100;Name=Msa0521100-mRNA-1;_AED=0.11;_eAED=0.11;_QI=224|1|1|1|1|1|5|520|421
chr3_4 exon 73740916 73741697 73740916 ID=Msa0521100-mRNA-1:exon:20730;Parent=Msa0521100-mRNA-1
chr3_4 exon 73742450 73742570 73742450 ID=Msa0521100-mRNA-1:exon:20731;Parent=Msa0521100-mRNA-1
chr3_4 exon 73743826 73744025 73743826 ID=Msa0521100-mRNA-1:exon:20732;Parent=Msa0521100-mRNA-1
chr3_4 exon 73744258 73744389 73744258 ID=Msa0521100-mRNA-1:exon:20733;Parent=Msa0521100-mRNA-1
chr3_4 exon 73744874 73745648 73744874 ID=Msa0521100-mRNA-1:exon:20734;Parent=Msa0521100-mRNA-1
chr3_4 five_prime_UTR 73740916 73741139 73740916 ID=Msa0521100-mRNA-1:five_prime_utr;Parent=Msa0521100-mRNA-1
chr3_4 CDS 73741140 73741697 73741140 ID=Msa0521100-mRNA-1:cds;Parent=Msa0521100-mRNA-1
chr3_4 CDS 73742450 73742570 73742450 ID=Msa0521100-mRNA-1:cds;Parent=Msa0521100-mRNA-1
chr3_4 CDS 73743826 73744025 73743826 ID=Msa0521100-mRNA-1:cds;Parent=Msa0521100-mRNA-1
chr3_4 CDS 73744258 73744389 73744258 ID=Msa0521100-mRNA-1:cds;Parent=Msa0521100-mRNA-1
chr3_4 CDS 73744874 73745128 73744874 ID=Msa0521100-mRNA-1:cds;Parent=Msa0521100-mRNA-1
chr3_4 three_prime_UTR 73745129 73745648 73745129 ID=Msa0521100-mRNA-1:three_prime_utr;Parent=Msa0521100-mRNA-1
Gene Sequence

>Msa0521100

ATGGCGTATCACAACCAAGACAACCCACTCCACCATTTCACAGAACAACAACAACAACAACCAACCTCCGATCCTCACCACTCTTTCCAAACTGCACCTAACTGGCTCAACAACGCCCTTCTTCGCAACCTCGACACCAACGTCAACGCCACCGCCACAACCAACAACAACAGTACCAACTTCCTCAACCTCGACACCGCCGGTTCCCAATCCTCCGGTCAATGGCTCTCCCGTCCTGTCCTCCACCGAAACCACAGCGAAGTCATCGACGACGTCACCGGCGCTGGTATGAAGGCCGAGGAAAGCGGTGAGGCAACAGCGGAGGGAGTGATGAACTGGCAGAAAGCGAAACGCAAAGGTGAAATAATGGCGCACCCGTTGTATGAACAGCTTCTATCAGCACACGTGTCGTGTTTGAGAATCGCCACGCCGGTTGACCAGTTGCCCAGGATCGACGCTCAGCTGGCAGAGTCACAGAATGTTGTTGCCAAGTACTCTGCGTTAGGACAACAGGGCATGCTTGATAACGATGATAATAAACAACTCGACCACTTCATGTCGCATTATGTTTTGTTGCTTTGTTCGTTCAAAGAACAGCTCCAACAACATGTCCGAGTCCATGCAATGGAAGCAGTAATGGCTTGTTGGGAGATCGAACAGTCCTTACAAAGTCTAACAGGAGTTTCACCAGGGGAAGGTACAGGAGCAACAATGTCTGAAGATGAAGATGAGCAAGTAGACAGTGATGTTAATCTGTTTGATGGAGGTTTGGATGGTTCAGATAATAGTATGGGAGGATTTGGTCCTCTTGTTCTAACAGAGAATGAGAGGTCCCTCATGGAACGTGTAAGACATGAATTAAAGCATGAGTTGAAACAGGGTTATAAAGAGAAAATTGTGGACATAAGAGAGGAAATTTTACGCAAGAGACGAGCTGGAAAACTTCCTGGTGACACAACCTCAGTACTTAAAGATTGGTGGCAATCACATTCAAAGTGGCCTTATCCTACTGAAGAGGATAAGGCAAGGTTGGTGCAAGAAACCGGGTTGCAATTGAAACAGATCAATAACTGGTTTATCAATCAAAGGAAGAGGAACTGGCACAGCAATCCTTCAACTTCTAATGCGTTGAAGAGCAAGCGCAAGAGGTATTTCTATATTAAAAAAATAGTCCTTTTCATAATCTTAAATTTGCATGAACTCTGCACCGATCTTGAATTAGAAATAAGTAATGCAGGTGATAAAAGTGACGGTCGTTACATGTAA

Protein sequence

>Msa0521100

MAYHNQDNPLHHFTEQQQQQPTSDPHHSFQTAPNWLNNALLRNLDTNVNATATTNNNSTNFLNLDTAGSQSSGQWLSRPVLHRNHSEVIDDVTGAGMKAEESGEATAEGVMNWQKAKRKGEIMAHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLAESQNVVAKYSALGQQGMLDNDDNKQLDHFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSEDEDEQVDSDVNLFDGGLDGSDNSMGGFGPLVLTENERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKDWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSNALKSKRKRYFYIKKIVLFIILNLHELCTDLELEISNAGDKSDGRYM*