Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0681880 | XP_003606324.1 | 98.155 | 542 | 10 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0681880 | sp|Q9FYC2|PAO_ARATH | 70.363 | 523 | 144 | 5 | 30 | 542 | 16 | 537 | 0.0 | 780 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0681880 | G7JM88 | 98.155 | 542 | 10 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1110 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005630 | Msa0681880 | 0.847174 | 1.366618e-59 | -8.615850e-47 |
| Msa0014970 | Msa0681880 | 0.812424 | 4.270245e-51 | -8.615850e-47 |
| Msa0021980 | Msa0681880 | 0.825175 | 5.408777e-54 | -8.615850e-47 |
| Msa0032450 | Msa0681880 | 0.805256 | 1.457069e-49 | -8.615850e-47 |
| Msa0040090 | Msa0681880 | 0.831599 | 1.523930e-55 | -8.615850e-47 |
| Msa0041780 | Msa0681880 | 0.845679 | 3.494557e-59 | -8.615850e-47 |
| Msa0044530 | Msa0681880 | 0.833700 | 4.587269e-56 | -8.615850e-47 |
| Msa0044780 | Msa0681880 | 0.809308 | 2.017526e-50 | -8.615850e-47 |
| Msa0050320 | Msa0681880 | 0.819705 | 1.009361e-52 | -8.615850e-47 |
| Msa0077250 | Msa0681880 | -0.814958 | 1.181685e-51 | -8.615850e-47 |
| Msa0085580 | Msa0681880 | 0.814354 | 1.608313e-51 | -8.615850e-47 |
| Msa0087780 | Msa0681880 | 0.804173 | 2.452751e-49 | -8.615850e-47 |
| Msa0087790 | Msa0681880 | 0.800665 | 1.295402e-48 | -8.615850e-47 |
| Msa0090350 | Msa0681880 | 0.817168 | 3.791938e-52 | -8.615850e-47 |
| Msa0091090 | Msa0681880 | 0.808544 | 2.940370e-50 | -8.615850e-47 |
| Msa0091220 | Msa0681880 | 0.837161 | 6.119536e-57 | -8.615850e-47 |
| Msa0091240 | Msa0681880 | 0.834917 | 2.271624e-56 | -8.615850e-47 |
| Msa0096570 | Msa0681880 | 0.853649 | 2.078882e-61 | -8.615850e-47 |
| Msa0117300 | Msa0681880 | 0.857271 | 1.829319e-62 | -8.615850e-47 |
| Msa0623360 | Msa0681880 | 0.854581 | 1.118883e-61 | -8.615850e-47 |
| Msa0630850 | Msa0681880 | 0.956462 | 2.788144e-114 | -8.615850e-47 |
| Msa0648200 | Msa0681880 | 0.862463 | 4.977180e-64 | -8.615850e-47 |
| Msa0648300 | Msa0681880 | 0.812506 | 4.097066e-51 | -8.615850e-47 |
| Msa0659020 | Msa0681880 | 0.822900 | 1.849250e-53 | -8.615850e-47 |
| Msa0681880 | Msa0682730 | -0.812717 | 3.682968e-51 | -8.615850e-47 |
| Msa0681880 | Msa0691140 | 0.833746 | 4.467784e-56 | -8.615850e-47 |
| Msa0681880 | Msa0704780 | 0.856021 | 4.261690e-62 | -8.615850e-47 |
| Msa0681880 | Msa0705050 | 0.844002 | 9.896517e-59 | -8.615850e-47 |
| Msa0681880 | Msa0714060 | 0.824627 | 7.285906e-54 | -8.615850e-47 |
| Msa0681880 | Msa0714200 | 0.823360 | 1.444841e-53 | -8.615850e-47 |
| Msa0681880 | Msa0729780 | 0.843823 | 1.105765e-58 | -8.615850e-47 |
| Msa0681880 | Msa0734190 | 0.841063 | 5.963047e-58 | -8.615850e-47 |
| Msa0681880 | Msa0756440 | 0.808122 | 3.617157e-50 | -8.615850e-47 |
| Msa0681880 | Msa0770020 | 0.839768 | 1.300271e-57 | -8.615850e-47 |
| Msa0681880 | Msa0775420 | 0.861939 | 7.208811e-64 | -8.615850e-47 |
| Msa0681880 | Msa0776590 | 0.829157 | 6.022320e-55 | -8.615850e-47 |
| Msa0681880 | Msa0796460 | 0.831416 | 1.690083e-55 | -8.615850e-47 |
| Msa0681880 | Msa0812800 | 0.862250 | 5.790564e-64 | -8.615850e-47 |
| Msa0681880 | Msa0834200 | 0.881554 | 2.178908e-70 | -8.615850e-47 |
| Msa0681880 | Msa0834240 | 0.861661 | 8.768849e-64 | -8.615850e-47 |
| Msa0681880 | Msa0835550 | 0.812730 | 3.659666e-51 | -8.615850e-47 |
| Msa0681880 | Msa0846300 | 0.809367 | 1.959395e-50 | -8.615850e-47 |
| Msa0681880 | Msa0848980 | 0.829623 | 4.641283e-55 | -8.615850e-47 |
| Msa0681880 | Msa0853150 | 0.835457 | 1.659148e-56 | -8.615850e-47 |
| Msa0681880 | Msa0861480 | 0.815633 | 8.364608e-52 | -8.615850e-47 |
| Msa0681880 | Msa0861560 | 0.807088 | 5.996661e-50 | -8.615850e-47 |
| Msa0681880 | Msa0884840 | 0.822569 | 2.208383e-53 | -8.615850e-47 |
| Msa0681880 | Msa0896920 | -0.827118 | 1.866025e-54 | -8.615850e-47 |
| Msa0681880 | Msa0899730 | 0.809579 | 1.764820e-50 | -8.615850e-47 |
| Msa0681880 | Msa0912110 | 0.800409 | 1.461065e-48 | -8.615850e-47 |
| Msa0681880 | Msa0927890 | 0.808158 | 3.553434e-50 | -8.615850e-47 |
| Msa0681880 | Msa0967260 | 0.802452 | 5.571846e-49 | -8.615850e-47 |
| Msa0681880 | Msa0968240 | 0.805318 | 1.414443e-49 | -8.615850e-47 |
| Msa0681880 | Msa0975560 | 0.814562 | 1.446224e-51 | -8.615850e-47 |
| Msa0681880 | Msa0984820 | 0.804971 | 1.671882e-49 | -8.615850e-47 |
| Msa0681880 | Msa0998940 | 0.801630 | 8.224278e-49 | -8.615850e-47 |
| Msa0681880 | Msa0999590 | 0.823973 | 1.037848e-53 | -8.615850e-47 |
| Msa0681880 | Msa1031530 | 0.805631 | 1.216332e-49 | -8.615850e-47 |
| Msa0681880 | Msa1036020 | -0.804275 | 2.335461e-49 | -8.615850e-47 |
| Msa0681880 | Msa1038110 | 0.821461 | 3.989234e-53 | -8.615850e-47 |
| Msa0681880 | Msa1038610 | 0.800948 | 1.134180e-48 | -8.615850e-47 |
| Msa0681880 | Msa1041550 | 0.808178 | 3.517997e-50 | -8.615850e-47 |
| Msa0681880 | Msa1061760 | -0.800897 | 1.161449e-48 | -8.615850e-47 |
| Msa0681880 | Msa1063210 | -0.813972 | 1.952145e-51 | -8.615850e-47 |
| Msa0681880 | Msa1070630 | 0.804802 | 1.813955e-49 | -8.615850e-47 |
| Msa0681880 | Msa1071310 | 0.813241 | 2.827158e-51 | -8.615850e-47 |
| Msa0681880 | Msa1072770 | 0.812953 | 3.270517e-51 | -8.615850e-47 |
| Msa0681880 | Msa1081530 | 0.814014 | 1.910856e-51 | -8.615850e-47 |
| Msa0681880 | Msa1089130 | 0.808800 | 2.592404e-50 | -8.615850e-47 |
| Msa0681880 | Msa1101610 | 0.859553 | 3.819901e-63 | -8.615850e-47 |
| Msa0681880 | Msa1127200 | -0.802076 | 6.659737e-49 | -8.615850e-47 |
| Msa0681880 | Msa1129660 | 0.832020 | 1.199523e-55 | -8.615850e-47 |
| Msa0681880 | Msa1133440 | 0.835931 | 1.259166e-56 | -8.615850e-47 |
| Msa0681880 | Msa1147600 | 0.814415 | 1.558460e-51 | -8.615850e-47 |
| Msa0681880 | Msa1158450 | 0.804973 | 1.670439e-49 | -8.615850e-47 |
| Msa0681880 | Msa1172070 | 0.816082 | 6.644109e-52 | -8.615850e-47 |
| Msa0681880 | Msa1172120 | 0.810168 | 1.317858e-50 | -8.615850e-47 |
| Msa0681880 | Msa1199580 | 0.880615 | 4.744781e-70 | -8.615850e-47 |
| Msa0681880 | Msa1204380 | 0.802472 | 5.520807e-49 | -8.615850e-47 |
| Msa0681880 | Msa1207710 | 0.802270 | 6.075690e-49 | -8.615850e-47 |
| Msa0681880 | Msa1207760 | 0.813632 | 2.320009e-51 | -8.615850e-47 |
| Msa0681880 | Msa1211260 | 0.808443 | 3.089869e-50 | -8.615850e-47 |
| Msa0681880 | Msa1211300 | 0.818391 | 2.008467e-52 | -8.615850e-47 |
| Msa0681880 | Msa1216700 | 0.837785 | 4.233428e-57 | -8.615850e-47 |
| Msa0681880 | Msa1216900 | 0.842183 | 3.021759e-58 | -8.615850e-47 |
| Msa0681880 | Msa1219060 | 0.802547 | 5.326296e-49 | -8.615850e-47 |
| Msa0681880 | Msa1229770 | 0.827903 | 1.209989e-54 | -8.615850e-47 |
| Msa0681880 | Msa1240060 | -0.820241 | 7.608878e-53 | -8.615850e-47 |
| Msa0681880 | Msa1243630 | 0.829398 | 5.264806e-55 | -8.615850e-47 |
| Msa0681880 | Msa1244220 | 0.826886 | 2.120390e-54 | -8.615850e-47 |
| Msa0681880 | Msa1257930 | 0.813796 | 2.134746e-51 | -8.615850e-47 |
| Msa0681880 | Msa1257960 | 0.809527 | 1.810516e-50 | -8.615850e-47 |
| Msa0681880 | Msa1262740 | 0.819971 | 8.775852e-53 | -8.615850e-47 |
| Msa0681880 | Msa1263610 | 0.856025 | 4.252692e-62 | -8.615850e-47 |
| Msa0681880 | Msa1281370 | -0.815880 | 7.369166e-52 | -8.615850e-47 |
| Msa0681880 | Msa1282210 | 0.809845 | 1.546934e-50 | -8.615850e-47 |
| Msa0681880 | Msa1283120 | 0.815731 | 7.955337e-52 | -8.615850e-47 |
| Msa0681880 | Msa1298540 | 0.808724 | 2.691105e-50 | -8.615850e-47 |
| Msa0681880 | Msa1298980 | 0.807344 | 5.293037e-50 | -8.615850e-47 |
| Msa0681880 | Msa1306700 | 0.801955 | 7.051256e-49 | -8.615850e-47 |
| Msa0681880 | Msa1320530 | -0.828160 | 1.049249e-54 | -8.615850e-47 |
| Msa0681880 | Msa1328630 | 0.877331 | 6.844500e-69 | -8.615850e-47 |
| Msa0681880 | Msa1328720 | 0.882946 | 6.796870e-71 | -8.615850e-47 |
| Msa0681880 | Msa1329010 | 0.804586 | 2.011558e-49 | -8.615850e-47 |
| Msa0681880 | Msa1329660 | 0.843207 | 1.614889e-58 | -8.615850e-47 |
| Msa0681880 | Msa1330900 | 0.803299 | 3.724458e-49 | -8.615850e-47 |
| Msa0681880 | Msa1332690 | 0.810362 | 1.196841e-50 | -8.615850e-47 |
| Msa0681880 | Msa1339310 | 0.811987 | 5.317665e-51 | -8.615850e-47 |
| Msa0681880 | Msa1342400 | 0.861707 | 8.490440e-64 | -8.615850e-47 |
| Msa0681880 | Msa1348330 | -0.810137 | 1.338613e-50 | -8.615850e-47 |
| Msa0681880 | Msa1352630 | 0.821878 | 3.195270e-53 | -8.615850e-47 |
| Msa0681880 | Msa1353280 | 0.850479 | 1.653956e-60 | -8.615850e-47 |
| Msa0681880 | Msa1355780 | -0.826946 | 2.051737e-54 | -8.615850e-47 |
| Msa0681880 | Msa1357720 | 0.802267 | 6.084636e-49 | -8.615850e-47 |
| Msa0681880 | Msa1368660 | 0.861406 | 1.049557e-63 | -8.615850e-47 |
| Msa0681880 | Msa1388270 | 0.821798 | 3.333278e-53 | -8.615850e-47 |
| Msa0681880 | Msa1388520 | 0.802420 | 5.659360e-49 | -8.615850e-47 |
| Msa0681880 | Msa1401000 | 0.833012 | 6.807351e-56 | -8.615850e-47 |
| Msa0681880 | Msa1407200 | 0.805652 | 1.203820e-49 | -8.615850e-47 |
| Msa0681880 | Msa1409050 | 0.806306 | 8.771816e-50 | -8.615850e-47 |
| Msa0681880 | Msa1409760 | 0.808225 | 3.438481e-50 | -8.615850e-47 |
| Msa0681880 | Msa1413900 | 0.815165 | 1.063333e-51 | -8.615850e-47 |
| Msa0681880 | Msa1415560 | 0.820332 | 7.253295e-53 | -8.615850e-47 |
| Msa0681880 | Msa1423930 | -0.826633 | 2.437705e-54 | -8.615850e-47 |
| Msa0681880 | Msa1427180 | 0.847088 | 1.442526e-59 | -8.615850e-47 |
| Msa0681880 | Msa1428560 | 0.846700 | 1.841950e-59 | -8.615850e-47 |
| Msa0681880 | Msa1431180 | 0.853175 | 2.842701e-61 | -8.615850e-47 |
| Msa0681880 | Msa1433380 | 0.805507 | 1.291076e-49 | -8.615850e-47 |
| Msa0681880 | Msa1442070 | 0.853909 | 1.749069e-61 | -8.615850e-47 |
| Msa0681880 | Msa1445700 | 0.824004 | 1.020776e-53 | -8.615850e-47 |
| Msa0681880 | Msa1446220 | 0.854179 | 1.462492e-61 | -8.615850e-47 |
| Msa0681880 | Msa1450630 | 0.833145 | 6.310630e-56 | -8.615850e-47 |
| Msa0681880 | Msa1450850 | 0.802265 | 6.088998e-49 | -8.615850e-47 |
| Msa0681880 | Msa1451690 | 0.840550 | 8.126761e-58 | -8.615850e-47 |
| Msa0681880 | Msa1452790 | 0.806163 | 9.398648e-50 | -8.615850e-47 |
| Msa0681880 | Msa1459610 | -0.807140 | 5.846155e-50 | -8.615850e-47 |
| Msa0681880 | Msa1459630 | 0.834981 | 2.188294e-56 | -8.615850e-47 |
| Msa0121480 | Msa0681880 | 0.812573 | 3.961713e-51 | -8.615850e-47 |
| Msa0134380 | Msa0681880 | 0.826195 | 3.099528e-54 | -8.615850e-47 |
| Msa0136180 | Msa0681880 | 0.831618 | 1.507128e-55 | -8.615850e-47 |
| Msa0137010 | Msa0681880 | 0.826789 | 2.236577e-54 | -8.615850e-47 |
| Msa0154720 | Msa0681880 | 0.819794 | 9.632022e-53 | -8.615850e-47 |
| Msa0160650 | Msa0681880 | 0.857953 | 1.148484e-62 | -8.615850e-47 |
| Msa0173280 | Msa0681880 | 0.801843 | 7.435189e-49 | -8.615850e-47 |
| Msa0180600 | Msa0681880 | 0.811806 | 5.824031e-51 | -8.615850e-47 |
| Msa0183200 | Msa0681880 | 0.808724 | 2.691105e-50 | -8.615850e-47 |
| Msa0184030 | Msa0681880 | 0.818801 | 1.621854e-52 | -8.615850e-47 |
| Msa0185950 | Msa0681880 | 0.801411 | 9.117864e-49 | -8.615850e-47 |
| Msa0186510 | Msa0681880 | 0.819428 | 1.167584e-52 | -8.615850e-47 |
| Msa0188500 | Msa0681880 | 0.852552 | 4.284664e-61 | -8.615850e-47 |
| Msa0196260 | Msa0681880 | -0.813330 | 2.702888e-51 | -8.615850e-47 |
| Msa0200840 | Msa0681880 | 0.820069 | 8.334651e-53 | -8.615850e-47 |
| Msa0200870 | Msa0681880 | 0.814221 | 1.720678e-51 | -8.615850e-47 |
| Msa0223190 | Msa0681880 | 0.849249 | 3.649587e-60 | -8.615850e-47 |
| Msa0229420 | Msa0681880 | 0.807886 | 4.060409e-50 | -8.615850e-47 |
| Msa0229750 | Msa0681880 | 0.848206 | 7.102479e-60 | -8.615850e-47 |
| Msa0230980 | Msa0681880 | 0.851006 | 1.175112e-60 | -8.615850e-47 |
| Msa0372990 | Msa0681880 | 0.836858 | 7.313191e-57 | -8.615850e-47 |
| Msa0375930 | Msa0681880 | 0.805019 | 1.634096e-49 | -8.615850e-47 |
| Msa0378670 | Msa0681880 | 0.847264 | 1.290548e-59 | -8.615850e-47 |
| Msa0378700 | Msa0681880 | 0.851291 | 9.766711e-61 | -8.615850e-47 |
| Msa0379500 | Msa0681880 | 0.820093 | 8.230858e-53 | -8.615850e-47 |
| Msa0380590 | Msa0681880 | -0.809725 | 1.641742e-50 | -8.615850e-47 |
| Msa0385770 | Msa0681880 | 0.827160 | 1.824091e-54 | -8.615850e-47 |
| Msa0387740 | Msa0681880 | 0.852470 | 4.521201e-61 | -8.615850e-47 |
| Msa0403720 | Msa0681880 | 0.871863 | 4.941072e-67 | -8.615850e-47 |
| Msa0404180 | Msa0681880 | 0.845856 | 3.127673e-59 | -8.615850e-47 |
| Msa0409250 | Msa0681880 | -0.821069 | 4.910872e-53 | -8.615850e-47 |
| Msa0416390 | Msa0681880 | -0.804671 | 1.931632e-49 | -8.615850e-47 |
| Msa0421390 | Msa0681880 | 0.843355 | 1.474109e-58 | -8.615850e-47 |
| Msa0424570 | Msa0681880 | 0.806352 | 8.576216e-50 | -8.615850e-47 |
| Msa0428330 | Msa0681880 | 0.851237 | 1.011685e-60 | -8.615850e-47 |
| Msa0431940 | Msa0681880 | 0.856484 | 3.119430e-62 | -8.615850e-47 |
| Msa0436590 | Msa0681880 | 0.840226 | 9.879151e-58 | -8.615850e-47 |
| Msa0436600 | Msa0681880 | 0.852869 | 3.478764e-61 | -8.615850e-47 |
| Msa0436610 | Msa0681880 | 0.849705 | 2.724664e-60 | -8.615850e-47 |
| Msa0438680 | Msa0681880 | 0.829567 | 4.790370e-55 | -8.615850e-47 |
| Msa0448400 | Msa0681880 | 0.860461 | 2.032682e-63 | -8.615850e-47 |
| Msa0453970 | Msa0681880 | -0.805262 | 1.453441e-49 | -8.615850e-47 |
| Msa0243820 | Msa0681880 | 0.851018 | 1.166496e-60 | -8.615850e-47 |
| Msa0264240 | Msa0681880 | 0.804822 | 1.796086e-49 | -8.615850e-47 |
| Msa0264420 | Msa0681880 | 0.857019 | 2.170495e-62 | -8.615850e-47 |
| Msa0270460 | Msa0681880 | 0.846578 | 1.989063e-59 | -8.615850e-47 |
| Msa0282500 | Msa0681880 | 0.827271 | 1.715950e-54 | -8.615850e-47 |
| Msa0302310 | Msa0681880 | 0.857261 | 1.841569e-62 | -8.615850e-47 |
| Msa0309060 | Msa0681880 | 0.827905 | 1.208165e-54 | -8.615850e-47 |
| Msa0339670 | Msa0681880 | 0.862228 | 5.879445e-64 | -8.615850e-47 |
| Msa0343990 | Msa0681880 | 0.829917 | 3.937034e-55 | -8.615850e-47 |
| Msa0352640 | Msa0681880 | 0.849482 | 3.142941e-60 | -8.615850e-47 |
| Msa0364010 | Msa0681880 | 0.859914 | 2.973085e-63 | -8.615850e-47 |
| Msa0496460 | Msa0681880 | 0.824883 | 6.341787e-54 | -8.615850e-47 |
| Msa0496470 | Msa0681880 | 0.852141 | 5.608140e-61 | -8.615850e-47 |
| Msa0496570 | Msa0681880 | 0.837750 | 4.321997e-57 | -8.615850e-47 |
| Msa0500420 | Msa0681880 | -0.805594 | 1.238000e-49 | -8.615850e-47 |
| Msa0501350 | Msa0681880 | 0.805955 | 1.039691e-49 | -8.615850e-47 |
| Msa0516000 | Msa0681880 | 0.805497 | 1.297270e-49 | -8.615850e-47 |
| Msa0520810 | Msa0681880 | 0.840574 | 8.010396e-58 | -8.615850e-47 |
| Msa0546370 | Msa0681880 | 0.936755 | 1.044523e-97 | -8.615850e-47 |
| Msa0547200 | Msa0681880 | -0.816566 | 5.175748e-52 | -8.615850e-47 |
| Msa0554440 | Msa0681880 | 0.838418 | 2.910131e-57 | -8.615850e-47 |
| Msa0568460 | Msa0681880 | 0.821531 | 3.842385e-53 | -8.615850e-47 |
| Msa0601920 | Msa0681880 | -0.815047 | 1.128925e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0681880 | MtrunA17_Chr4g0027961 | 98.155 | 542 | 10 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1110 |
| Msa0681880 | MtrunA17_Chr8g0378721 | 34.953 | 535 | 291 | 20 | 33 | 539 | 22 | 527 | 2.84e-91 | 289 |
| Msa0681880 | MtrunA17_Chr8g0378671 | 35.338 | 532 | 292 | 19 | 33 | 539 | 22 | 526 | 5.35e-91 | 289 |
| Msa0681880 | MtrunA17_Chr8g0378701 | 35.142 | 387 | 209 | 12 | 33 | 397 | 36 | 402 | 1.03e-66 | 222 |
| Msa0681880 | MtrunA17_Chr3g0136771 | 28.931 | 477 | 276 | 17 | 78 | 520 | 84 | 531 | 2.28e-52 | 187 |
| Msa0681880 | MtrunA17_Chr8g0378691 | 33.333 | 132 | 79 | 5 | 414 | 539 | 26 | 154 | 2.25e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0681880 | AT3G44880.1 | 70.363 | 523 | 144 | 5 | 30 | 542 | 16 | 537 | 0.0 | 780 |
| Msa0681880 | AT4G25650.1 | 33.539 | 486 | 273 | 13 | 84 | 541 | 73 | 536 | 2.69e-83 | 269 |
| Msa0681880 | AT4G25650.2 | 32.220 | 509 | 272 | 14 | 84 | 541 | 73 | 559 | 8.36e-80 | 261 |
| Msa0681880 | AT2G24820.1 | 27.837 | 564 | 324 | 19 | 15 | 532 | 7 | 533 | 8.71e-54 | 191 |
Find 138 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTCTTCTGTTTCTGTTTC+TGG | -0.065980 | 4_4:-42767159 | None:intergenic |
| GCCTACGCCGTTTCAGCTTC+TGG | 0.120106 | 4_4:+42767355 | Msa0681880:CDS |
| AACTATAAAGACAAATAAAA+TGG | 0.178282 | 4_4:+42766908 | Msa0681880:five_prime_UTR |
| CACTTCTAACTGTTACTAAA+AGG | 0.221780 | 4_4:-42767181 | None:intergenic |
| ATAACATGGTGCAATAAATT+TGG | 0.238122 | 4_4:-42770142 | None:intergenic |
| CTCAGGGATTGCTCTTTGTT+TGG | 0.265240 | 4_4:+42768168 | Msa0681880:CDS |
| TTTCTTCTGTTTCTGTTTCT+GGG | 0.265580 | 4_4:-42767158 | None:intergenic |
| CTGCTCTTGCCGAACCATTC+AGG | 0.272155 | 4_4:-42771158 | None:intergenic |
| ATATCCATATTACCCATTTC+TGG | 0.295421 | 4_4:-42770549 | None:intergenic |
| GATGAAAAGAGAAACGGTTT+TGG | 0.304587 | 4_4:-42767095 | None:intergenic |
| AGATCTTCAATCAAAGAAAC+TGG | 0.307795 | 4_4:-42767320 | None:intergenic |
| GTTTCCTACCTTGGTGTCTC+AGG | 0.314846 | 4_4:+42768151 | Msa0681880:CDS |
| ATTTCCACTCCATAGGTTAC+AGG | 0.323502 | 4_4:+42770024 | Msa0681880:intron |
| TACTCAGCTGCGCATAGTTT+TGG | 0.327030 | 4_4:+42771462 | Msa0681880:CDS |
| CCTACGCCGTTTCAGCTTCT+GGG | 0.330171 | 4_4:+42767356 | Msa0681880:CDS |
| TTCTTCCAGCTCACGGTGCC+AGG | 0.334083 | 4_4:+42770634 | Msa0681880:CDS |
| CCGTGGTTGGTGACCAGAAA+TGG | 0.334810 | 4_4:+42770536 | Msa0681880:CDS |
| GATCCAACAGCACGCGCTTC+CGG | 0.340404 | 4_4:-42768107 | None:intergenic |
| TGCATAATATATTCAAGGTC+TGG | 0.342298 | 4_4:-42771881 | None:intergenic |
| AGTTTCTTTGATTGAAGATC+TGG | 0.343549 | 4_4:+42767322 | Msa0681880:CDS |
| TGCTACTAGGTTTCCTACCT+TGG | 0.353927 | 4_4:+42768142 | Msa0681880:CDS |
| GTGACCAGAAATGGGTAATA+TGG | 0.353988 | 4_4:+42770545 | Msa0681880:CDS |
| GAAGGAAGGATAGATGAAAA+TGG | 0.368399 | 4_4:+42768002 | Msa0681880:CDS |
| GCAACTAGTAATAAAACCTT+TGG | 0.368592 | 4_4:-42771596 | None:intergenic |
| GTTAATGTCACCGCCATTCT+CGG | 0.368858 | 4_4:-42771042 | None:intergenic |
| TTGTGTTGGCATTTAGAAAT+TGG | 0.373510 | 4_4:+42771111 | Msa0681880:CDS |
| GTCACCAACCACGGGGAGTT+TGG | 0.380037 | 4_4:-42770527 | None:intergenic |
| AGATGGATTCACGTGGTTCA+TGG | 0.404907 | 4_4:+42770079 | Msa0681880:CDS |
| TCACGGTGCCAGGGCCTGCC+TGG | 0.405008 | 4_4:+42770644 | Msa0681880:CDS |
| TTTGTTTGGCCTGATGAGAA+TGG | 0.405990 | 4_4:+42768182 | Msa0681880:CDS |
| GCACGCGCTTCCGGACCTTC+AGG | 0.406540 | 4_4:-42768098 | None:intergenic |
| CAGGCCCTGGCACCGTGAGC+TGG | 0.407256 | 4_4:-42770639 | None:intergenic |
| TTCTCCCAACCATTCTCATC+AGG | 0.410926 | 4_4:-42768191 | None:intergenic |
| GGTCCGGAAGCGCGTGCTGT+TGG | 0.422340 | 4_4:+42768104 | Msa0681880:CDS |
| CTCCTAGAGCTTGTGCTACT+AGG | 0.425826 | 4_4:+42768129 | Msa0681880:CDS |
| ACTTGCCACCAGGCAGGCCC+TGG | 0.430231 | 4_4:-42770652 | None:intergenic |
| TGGGTCGTGAAATTGTGCTT+TGG | 0.438370 | 4_4:+42767375 | Msa0681880:CDS |
| AGCTTGTAAAGGAGCTTATG+AGG | 0.440308 | 4_4:+42771366 | Msa0681880:CDS |
| TTGATAAGGCTAATTCTCAA+TGG | 0.441751 | 4_4:+42767399 | Msa0681880:CDS |
| TCAGGCTTCACCTGAAGGTC+CGG | 0.443398 | 4_4:+42768088 | Msa0681880:CDS |
| GATGGATTCACGTGGTTCAT+GGG | 0.447972 | 4_4:+42770080 | Msa0681880:CDS |
| ATCCCTCAGGCTTCACCTGA+AGG | 0.455756 | 4_4:+42768083 | Msa0681880:CDS |
| TTTCCTACCTTGGTGTCTCA+GGG | 0.456423 | 4_4:+42768152 | Msa0681880:CDS |
| CCTCGTGATGTTTGCTCAGT+TGG | 0.458758 | 4_4:-42771913 | None:intergenic |
| AATTGTGCTTTGGTTTGATA+AGG | 0.463189 | 4_4:+42767385 | Msa0681880:CDS |
| TGATAAGGCTAATTCTCAAT+GGG | 0.464457 | 4_4:+42767400 | Msa0681880:CDS |
| TGAAACGGCGTAGGCAAACT+AGG | 0.465653 | 4_4:-42767347 | None:intergenic |
| AACTTGCAGTGTTCTTATCA+TGG | 0.471539 | 4_4:+42768026 | Msa0681880:CDS |
| TAAACAAATCATTACATTGG+AGG | 0.472678 | 4_4:-42768230 | None:intergenic |
| CCACGTGAATCCATCTTGAA+TGG | 0.476840 | 4_4:-42770072 | None:intergenic |
| GCATAATATATTCAAGGTCT+GGG | 0.479790 | 4_4:-42771880 | None:intergenic |
| TGTCTCAGGTGGTTCCTAGA+TGG | 0.480851 | 4_4:+42770937 | Msa0681880:intron |
| ACACAACTGTTGCACCAGTC+AGG | 0.489551 | 4_4:-42771411 | None:intergenic |
| CGTGGTTGGTGACCAGAAAT+GGG | 0.494565 | 4_4:+42770537 | Msa0681880:CDS |
| GACAATGCATAATATATTCA+AGG | 0.495002 | 4_4:-42771886 | None:intergenic |
| GTGAAGGATGAAAAGAGAAA+CGG | 0.495635 | 4_4:-42767101 | None:intergenic |
| ATGTTCACCGTCGCAAACTC+TGG | 0.495962 | 4_4:-42768579 | None:intergenic |
| CGAGTCTTACCAGGTGCCAT+GGG | 0.496305 | 4_4:-42770586 | None:intergenic |
| ACTATAAAGACAAATAAAAT+GGG | 0.496411 | 4_4:+42766909 | Msa0681880:five_prime_UTR |
| AACCGTACTATCAAAACGTC+AGG | 0.497409 | 4_4:+42771199 | Msa0681880:CDS |
| TGATGTTTGCTCAGTTGGTA+TGG | 0.498301 | 4_4:-42771908 | None:intergenic |
| AATGGCCAACCTGAATGGTT+CGG | 0.505921 | 4_4:+42771149 | Msa0681880:CDS |
| TTCAATGTCCCCATGGCACC+TGG | 0.510022 | 4_4:+42770577 | Msa0681880:CDS |
| TTTGGCCTGATGAGAATGGT+TGG | 0.514461 | 4_4:+42768186 | Msa0681880:CDS |
| TCGAAATTTCTTCCAGCTCA+CGG | 0.516385 | 4_4:+42770627 | Msa0681880:CDS |
| GCGAGTCTTACCAGGTGCCA+TGG | 0.519997 | 4_4:-42770587 | None:intergenic |
| ACGGCAATGGCCAACCTGAA+TGG | 0.522604 | 4_4:+42771144 | Msa0681880:CDS |
| TGCAGTGTTCTTATCATGGG+TGG | 0.523912 | 4_4:+42768030 | Msa0681880:CDS |
| CTAAAGTGTTCAGCTTGTAA+AGG | 0.524879 | 4_4:+42771355 | Msa0681880:CDS |
| TGGCTGAGGCGACACGGCAA+TGG | 0.525095 | 4_4:+42771131 | Msa0681880:CDS |
| AGGTGCCATGGGGACATTGA+AGG | 0.525388 | 4_4:-42770575 | None:intergenic |
| GTACGGTTGAAGGCAATGGC+TGG | 0.525732 | 4_4:-42771184 | None:intergenic |
| CATCTTGAATGGAAGAGGCT+TGG | 0.526200 | 4_4:-42770061 | None:intergenic |
| TCACGACCCAGAAGCTGAAA+CGG | 0.528461 | 4_4:-42767362 | None:intergenic |
| TTGGCCTGATGAGAATGGTT+GGG | 0.528911 | 4_4:+42768187 | Msa0681880:CDS |
| GAATCCATCTTGAATGGAAG+AGG | 0.529803 | 4_4:-42770066 | None:intergenic |
| ACTTGCAGTGTTCTTATCAT+GGG | 0.533069 | 4_4:+42768027 | Msa0681880:CDS |
| CATTTCTGGTCACCAACCAC+GGG | 0.533924 | 4_4:-42770535 | None:intergenic |
| ATCACGGATGATTATTTCGA+AGG | 0.535670 | 4_4:+42771785 | Msa0681880:three_prime_UTR |
| CTACGGCTATGATACTCTCA+TGG | 0.535693 | 4_4:+42768617 | Msa0681880:CDS |
| TGAACGTGTTATTACTCCAA+AGG | 0.541133 | 4_4:+42771580 | Msa0681880:exon |
| CGGTGCCAGGGCCTGCCTGG+TGG | 0.541920 | 4_4:+42770647 | Msa0681880:CDS |
| ACGATGGAGCGAGTCTTACC+AGG | 0.542041 | 4_4:-42770595 | None:intergenic |
| TTTCTCGCAGAAACCGAGAA+TGG | 0.544480 | 4_4:+42771029 | Msa0681880:CDS |
| GTCCAATGTTCATACCATCT+AGG | 0.546736 | 4_4:-42770951 | None:intergenic |
| GGTGACATGATTGTACTTCA+AGG | 0.548561 | 4_4:+42770993 | Msa0681880:CDS |
| TCTTCCAGCTCACGGTGCCA+GGG | 0.550242 | 4_4:+42770635 | Msa0681880:CDS |
| CAAGCCTCTTCCATTCAAGA+TGG | 0.553250 | 4_4:+42770062 | Msa0681880:CDS |
| ATGCGCAGCTGAGTATCTGA+TGG | 0.558491 | 4_4:-42771454 | None:intergenic |
| GATAGTACGGTTGAAGGCAA+TGG | 0.559294 | 4_4:-42771188 | None:intergenic |
| CTTATGAGGGATTCCAAACA+TGG | 0.560004 | 4_4:+42771380 | Msa0681880:CDS |
| AGGTTGCACTGTGATCCCTC+AGG | 0.562050 | 4_4:+42768070 | Msa0681880:CDS |
| AATCTTACTTGCCACCAGGC+AGG | 0.562524 | 4_4:-42770658 | None:intergenic |
| TAAATTTGGAACTGATCCGC+GGG | 0.568789 | 4_4:-42770128 | None:intergenic |
| ATCGGCCTGTGTTGGTGTGA+AGG | 0.569741 | 4_4:-42771084 | None:intergenic |
| AACCTAGTAGCACAAGCTCT+AGG | 0.570794 | 4_4:-42768131 | None:intergenic |
| CCATTTCTGGTCACCAACCA+CGG | 0.571640 | 4_4:-42770536 | None:intergenic |
| GACCTTCAGGTGAAGCCTGA+GGG | 0.571686 | 4_4:-42768085 | None:intergenic |
| ACAAAACGATCGGCCTGTGT+TGG | 0.573172 | 4_4:-42771092 | None:intergenic |
| TTCCTAGATGGTATGAACAT+TGG | 0.578101 | 4_4:+42770949 | Msa0681880:CDS |
| GCTTGTAAAGGAGCTTATGA+GGG | 0.580240 | 4_4:+42771367 | Msa0681880:CDS |
| AAAACTACACTTACGGACAA+AGG | 0.584684 | 4_4:-42767458 | None:intergenic |
| ATGGATTCACGTGGTTCATG+GGG | 0.586611 | 4_4:+42770081 | Msa0681880:CDS |
| TGGCATTTAGAAATTGGCTG+AGG | 0.593473 | 4_4:+42771117 | Msa0681880:CDS |
| TCTTGCCGAACCATTCAGGT+TGG | 0.593673 | 4_4:-42771154 | None:intergenic |
| ACATGTTAACATTAACATCA+AGG | 0.598287 | 4_4:-42771705 | None:intergenic |
| AGAAATTGGCTGAGGCGACA+CGG | 0.601844 | 4_4:+42771125 | Msa0681880:CDS |
| GATACCAAACTCCCCGTGGT+TGG | 0.603630 | 4_4:+42770523 | Msa0681880:CDS |
| ACATGGCAGAAAATCCTGAC+TGG | 0.607454 | 4_4:+42771397 | Msa0681880:CDS |
| CCATTCAAGATGGATTCACG+TGG | 0.609365 | 4_4:+42770072 | Msa0681880:CDS |
| CCTCACCTTCACACCAACAC+AGG | 0.610530 | 4_4:+42771079 | Msa0681880:CDS |
| ATGTTCCTTCAATGTCCCCA+TGG | 0.611264 | 4_4:+42770570 | Msa0681880:CDS |
| AAATGCCAACACAAAACGAT+CGG | 0.613810 | 4_4:-42771102 | None:intergenic |
| ATAAATTTGGAACTGATCCG+CGG | 0.618874 | 4_4:-42770129 | None:intergenic |
| TGAGCAAAATCAATGTGAGA+AGG | 0.619222 | 4_4:-42768654 | None:intergenic |
| GTGGTTGAAAGTGCCATCAA+TGG | 0.622871 | 4_4:-42767023 | None:intergenic |
| ATTTCGAGCACTGCAAACGA+TGG | 0.623592 | 4_4:-42770611 | None:intergenic |
| AATTGTAAATGTTAGAGATG+AGG | 0.623678 | 4_4:+42771620 | Msa0681880:three_prime_UTR |
| CCTGTGTTGGTGTGAAGGTG+AGG | 0.628478 | 4_4:-42771079 | None:intergenic |
| TAGAAATCTTACTTGCCACC+AGG | 0.633598 | 4_4:-42770662 | None:intergenic |
| GGACCTTCAGGTGAAGCCTG+AGG | 0.638965 | 4_4:-42768086 | None:intergenic |
| TACTTGTTAATATAATAACA+TGG | 0.641143 | 4_4:-42770156 | None:intergenic |
| CCACTCCATAGGTTACAGGA+AGG | 0.641894 | 4_4:+42770028 | Msa0681880:intron |
| GAGCAATCCCTGAGACACCA+AGG | 0.653614 | 4_4:-42768159 | None:intergenic |
| AATCCCTGAGACACCAAGGT+AGG | 0.654755 | 4_4:-42768155 | None:intergenic |
| TGTTGCTAAAGATGAAAGTG+TGG | 0.655843 | 4_4:-42767042 | None:intergenic |
| TGAACATTGGACTTCAAACA+AGG | 0.656690 | 4_4:+42770962 | Msa0681880:CDS |
| CTCGCAGAAACCGAGAATGG+CGG | 0.656709 | 4_4:+42771032 | Msa0681880:CDS |
| GACAAAGGAGCAAGACGATG+AGG | 0.657329 | 4_4:-42767443 | None:intergenic |
| GATCTTCAATCAAAGAAACT+GGG | 0.658234 | 4_4:-42767319 | None:intergenic |
| ACTTCAAACAAGGTATATGA+CGG | 0.664094 | 4_4:+42770972 | Msa0681880:CDS |
| CCCAGAAGCTGAAACGGCGT+AGG | 0.671253 | 4_4:-42767356 | None:intergenic |
| GAGCTAATGAAGGGAACCCG+CGG | 0.685044 | 4_4:+42770112 | Msa0681880:CDS |
| TACACATATTAACGTACACG+TGG | 0.692393 | 4_4:-42771651 | None:intergenic |
| TGTAAAACCAGAGTTTGCGA+CGG | 0.708528 | 4_4:+42768572 | Msa0681880:CDS |
| GAGTCTTACCAGGTGCCATG+GGG | 0.713819 | 4_4:-42770585 | None:intergenic |
| GATCGATACCAAACTCCCCG+TGG | 0.727360 | 4_4:+42770519 | Msa0681880:CDS |
| ATTTCTGGTCACCAACCACG+GGG | 0.751627 | 4_4:-42770534 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTGATTAAATTTAAATAATT+TGG | - | chr4_4:42769030-42769049 | None:intergenic | 10.0% |
| !! | AATATTCATATTATTAAGAA+AGG | - | chr4_4:42769554-42769573 | None:intergenic | 10.0% |
| !! | ATTATTTAGTATTATTTGTT+AGG | + | chr4_4:42769974-42769993 | Msa0681880:intron | 10.0% |
| !!! | TTATTTAGTATTATTTGTTA+GGG | + | chr4_4:42769975-42769994 | Msa0681880:intron | 10.0% |
| !!! | TATTCATTTTTAATTGAAAA+GGG | + | chr4_4:42770316-42770335 | Msa0681880:intron | 10.0% |
| !! | AACTATAAAGACAAATAAAA+TGG | + | chr4_4:42766908-42766927 | Msa0681880:five_prime_UTR | 15.0% |
| !! | ACTATAAAGACAAATAAAAT+GGG | + | chr4_4:42766909-42766928 | Msa0681880:five_prime_UTR | 15.0% |
| !! | AATTAAACAAATCATTACAT+TGG | - | chr4_4:42768236-42768255 | None:intergenic | 15.0% |
| !!! | TATAAGATAACATTTTTAAG+TGG | - | chr4_4:42768476-42768495 | None:intergenic | 15.0% |
| !! | TATTAAGATATTATTGTAAG+TGG | + | chr4_4:42768764-42768783 | Msa0681880:intron | 15.0% |
| !! | TGAGTGAAAATATATAAAAA+TGG | - | chr4_4:42768865-42768884 | None:intergenic | 15.0% |
| !! | TAAATTTAATCACTTAAGAT+TGG | + | chr4_4:42769037-42769056 | Msa0681880:intron | 15.0% |
| !!! | TACTTGTTAATATAATAACA+TGG | - | chr4_4:42770159-42770178 | None:intergenic | 15.0% |
| !!! | AAATGAATACTATTCTTTTA+TGG | - | chr4_4:42770305-42770324 | None:intergenic | 15.0% |
| !!! | GTATTCATTTTTAATTGAAA+AGG | + | chr4_4:42770315-42770334 | Msa0681880:intron | 15.0% |
| !!! | TGTTTTTTTTTTTTTTGTAG+TGG | + | chr4_4:42771845-42771864 | Msa0681880:three_prime_UTR | 15.0% |
| !!! | TTGTTTGAGTTTTTTAACAA+TGG | - | chr4_4:42766991-42767010 | None:intergenic | 20.0% |
| !! | AAATTTAATTAAGCCATGTT+TGG | + | chr4_4:42767506-42767525 | Msa0681880:intron | 20.0% |
| !! | ATTATAAGTAAGTGTATGTT+TGG | - | chr4_4:42767822-42767841 | None:intergenic | 20.0% |
| !! | TTAGATCATTAAACCTATTA+TGG | - | chr4_4:42768384-42768403 | None:intergenic | 20.0% |
| !!! | TATACTTTTATTGATCTGTT+TGG | + | chr4_4:42768516-42768535 | Msa0681880:intron | 20.0% |
| !!! | TTGGTAAAATTTTGTATGTT+AGG | + | chr4_4:42768535-42768554 | Msa0681880:intron | 20.0% |
| !!! | ACCTTTTTAACAAAACAAAA+AGG | + | chr4_4:42769060-42769079 | Msa0681880:intron | 20.0% |
| !!! | CCTTTTTAACAAAACAAAAA+GGG | + | chr4_4:42769061-42769080 | Msa0681880:intron | 20.0% |
| !! | TATAAATTGGTATAAGATCT+TGG | - | chr4_4:42769272-42769291 | None:intergenic | 20.0% |
| !! | TATTGTGTCTTAATGATTTA+TGG | + | chr4_4:42769837-42769856 | Msa0681880:intron | 20.0% |
| !! | TAAATTTAGCAAATCCAAAA+GGG | - | chr4_4:42769877-42769896 | None:intergenic | 20.0% |
| !!! | TTCTATGAAACCATTTTATT+CGG | + | chr4_4:42770816-42770835 | Msa0681880:intron | 20.0% |
| !! | TAAAAATCTTCCGAATAAAA+TGG | - | chr4_4:42770829-42770848 | None:intergenic | 20.0% |
| !!! | AAACAAAATTGTTTTTCAGT+TGG | - | chr4_4:42771531-42771550 | None:intergenic | 20.0% |
| !!! | GTTTATTTTTTCATAGATCA+CGG | + | chr4_4:42771769-42771788 | Msa0681880:three_prime_UTR | 20.0% |
| !!! | AAATTGTGACTTTTTTGTGA+AGG | - | chr4_4:42767120-42767139 | None:intergenic | 25.0% |
| !! | TTCATCAATTTCGTTCTTTT+CGG | - | chr4_4:42767246-42767265 | None:intergenic | 25.0% |
| ! | ACAACAAAAAACTACACTTA+CGG | - | chr4_4:42767468-42767487 | None:intergenic | 25.0% |
| !!! | CTTATTTTCATTTGTTCTTC+AGG | - | chr4_4:42767654-42767673 | None:intergenic | 25.0% |
| ! | AAAAACCAACCAAATCATAA+AGG | - | chr4_4:42767978-42767997 | None:intergenic | 25.0% |
| ! | TAAACAAATCATTACATTGG+AGG | - | chr4_4:42768233-42768252 | None:intergenic | 25.0% |
| !! | AGTTGATATAAGTCCATAAT+AGG | + | chr4_4:42768368-42768387 | Msa0681880:intron | 25.0% |
| ! | TTAGAAAAGTTGTTGTGATT+GGG | + | chr4_4:42768450-42768469 | Msa0681880:intron | 25.0% |
| ! | TAAAAATGGAACAAACCAAA+AGG | - | chr4_4:42768851-42768870 | None:intergenic | 25.0% |
| !!! | CCCTTTTTGTTTTGTTAAAA+AGG | - | chr4_4:42769064-42769083 | None:intergenic | 25.0% |
| !!! | AGTGTTTCTAAATTTTGTGT+AGG | - | chr4_4:42769423-42769442 | None:intergenic | 25.0% |
| !! | ATCACAAATTATTTCTCTCT+TGG | + | chr4_4:42769500-42769519 | Msa0681880:intron | 25.0% |
| !! | GATTTGAGATATATGATGAT+AGG | - | chr4_4:42769532-42769551 | None:intergenic | 25.0% |
| ! | CTAAATTTAGCAAATCCAAA+AGG | - | chr4_4:42769878-42769897 | None:intergenic | 25.0% |
| ! | ATAACATGGTGCAATAAATT+TGG | - | chr4_4:42770145-42770164 | None:intergenic | 25.0% |
| ! | GGCATCAAATAATGTAAAAT+GGG | - | chr4_4:42770235-42770254 | None:intergenic | 25.0% |
| ! | TGGCATCAAATAATGTAAAA+TGG | - | chr4_4:42770236-42770255 | None:intergenic | 25.0% |
| ! | TTATTTGATGCCATCTTAAA+TGG | + | chr4_4:42770243-42770262 | Msa0681880:intron | 25.0% |
| ! | ATGAATTATGTACTTGTTCA+TGG | + | chr4_4:42770279-42770298 | Msa0681880:intron | 25.0% |
| !!! | CATTTTTAATTGAAAAGGGA+CGG | + | chr4_4:42770320-42770339 | Msa0681880:intron | 25.0% |
| ! | AAAGACTATTACTTTATGCT+TGG | + | chr4_4:42770426-42770445 | Msa0681880:intron | 25.0% |
| !!! | AAACTAAGCACTATTTTTTC+AGG | + | chr4_4:42770491-42770510 | Msa0681880:intron | 25.0% |
| !! | CGGAAGATTTTTAAACAAAT+TGG | + | chr4_4:42770836-42770855 | Msa0681880:intron | 25.0% |
| !!! | TTCTAGGATAAAATATTTCC+AGG | + | chr4_4:42770883-42770902 | Msa0681880:intron | 25.0% |
| !!! | TTTGTTTTTCATGTAGATGT+TGG | + | chr4_4:42771312-42771331 | Msa0681880:intron | 25.0% |
| !!! | ATTGTTTTTCAGTTGGTTTA+TGG | - | chr4_4:42771524-42771543 | None:intergenic | 25.0% |
| ! | AATTGTAAATGTTAGAGATG+AGG | + | chr4_4:42771620-42771639 | Msa0681880:three_prime_UTR | 25.0% |
| ! | ACATGTTAACATTAACATCA+AGG | - | chr4_4:42771708-42771727 | None:intergenic | 25.0% |
| ! | GACAATGCATAATATATTCA+AGG | - | chr4_4:42771889-42771908 | None:intergenic | 25.0% |
| !! | AACAAAAAAAGCACCATTGA+TGG | + | chr4_4:42767010-42767029 | Msa0681880:exon | 30.0% |
| !! | TTTCTTCTGTTTCTGTTTCT+GGG | - | chr4_4:42767161-42767180 | None:intergenic | 30.0% |
| CACTTCTAACTGTTACTAAA+AGG | - | chr4_4:42767184-42767203 | None:intergenic | 30.0% | |
| GATCTTCAATCAAAGAAACT+GGG | - | chr4_4:42767322-42767341 | None:intergenic | 30.0% | |
| AGATCTTCAATCAAAGAAAC+TGG | - | chr4_4:42767323-42767342 | None:intergenic | 30.0% | |
| AGTTTCTTTGATTGAAGATC+TGG | + | chr4_4:42767322-42767341 | Msa0681880:CDS | 30.0% | |
| !! | AATTGTGCTTTGGTTTGATA+AGG | + | chr4_4:42767385-42767404 | Msa0681880:CDS | 30.0% |
| TTGATAAGGCTAATTCTCAA+TGG | + | chr4_4:42767399-42767418 | Msa0681880:CDS | 30.0% | |
| TGATAAGGCTAATTCTCAAT+GGG | + | chr4_4:42767400-42767419 | Msa0681880:CDS | 30.0% | |
| TGTTGTTGAAGATTGAATTG+AGG | + | chr4_4:42767482-42767501 | Msa0681880:intron | 30.0% | |
| GTTGTTGAAGATTGAATTGA+GGG | + | chr4_4:42767483-42767502 | Msa0681880:intron | 30.0% | |
| TTAAGCCATGTTTGGATAAA+CGG | + | chr4_4:42767514-42767533 | Msa0681880:intron | 30.0% | |
| ACTTAATTGAGCACATCTAT+TGG | - | chr4_4:42767942-42767961 | None:intergenic | 30.0% | |
| GTAAACTGACCTTTATGATT+TGG | + | chr4_4:42767966-42767985 | Msa0681880:intron | 30.0% | |
| TTATGGACTTATATCAACTC+AGG | - | chr4_4:42768367-42768386 | None:intergenic | 30.0% | |
| CTTAGAAAAGTTGTTGTGAT+TGG | + | chr4_4:42768449-42768468 | Msa0681880:intron | 30.0% | |
| TATACTAAGTGATGTTGATG+TGG | + | chr4_4:42768803-42768822 | Msa0681880:intron | 30.0% | |
| TGCAATCAAGAATTTAGTCA+AGG | + | chr4_4:42768941-42768960 | Msa0681880:intron | 30.0% | |
| !!! | TCTTGATGTCTAGCTTTTAA+GGG | - | chr4_4:42769125-42769144 | None:intergenic | 30.0% |
| !!! | TTCTTGATGTCTAGCTTTTA+AGG | - | chr4_4:42769126-42769145 | None:intergenic | 30.0% |
| TTAAAAGCTAGACATCAAGA+AGG | + | chr4_4:42769125-42769144 | Msa0681880:intron | 30.0% | |
| AAATATGATTTCCACTCCAT+AGG | + | chr4_4:42770017-42770036 | Msa0681880:intron | 30.0% | |
| TATATTAACAAGTAAGCCAG+TGG | + | chr4_4:42770165-42770184 | Msa0681880:intron | 30.0% | |
| !! | TGAAAAGTACTTTCATGCAA+AGG | - | chr4_4:42770191-42770210 | None:intergenic | 30.0% |
| ! | AGTACTTTTCATACGAATTC+TGG | + | chr4_4:42770200-42770219 | Msa0681880:intron | 30.0% |
| AAGTTACTCACCATTTAAGA+TGG | - | chr4_4:42770256-42770275 | None:intergenic | 30.0% | |
| ATATCCATATTACCCATTTC+TGG | - | chr4_4:42770552-42770571 | None:intergenic | 30.0% | |
| ACATGAACAAGAAAATCGTT+AGG | - | chr4_4:42770920-42770939 | None:intergenic | 30.0% | |
| ACTTCAAACAAGGTATATGA+CGG | + | chr4_4:42770972-42770991 | Msa0681880:CDS | 30.0% | |
| ! | TTGTGTTGGCATTTAGAAAT+TGG | + | chr4_4:42771111-42771130 | Msa0681880:CDS | 30.0% |
| TTGGTTTATGGAAAAAGCTA+AGG | - | chr4_4:42771512-42771531 | None:intergenic | 30.0% | |
| GCAACTAGTAATAAAACCTT+TGG | - | chr4_4:42771599-42771618 | None:intergenic | 30.0% | |
| GCATAATATATTCAAGGTCT+GGG | - | chr4_4:42771883-42771902 | None:intergenic | 30.0% | |
| TGCATAATATATTCAAGGTC+TGG | - | chr4_4:42771884-42771903 | None:intergenic | 30.0% | |
| TGTTGCTAAAGATGAAAGTG+TGG | - | chr4_4:42767045-42767064 | None:intergenic | 35.0% | |
| ! | GATGAAAAGAGAAACGGTTT+TGG | - | chr4_4:42767098-42767117 | None:intergenic | 35.0% |
| GTGAAGGATGAAAAGAGAAA+CGG | - | chr4_4:42767104-42767123 | None:intergenic | 35.0% | |
| !! | GTTTCTTCTGTTTCTGTTTC+TGG | - | chr4_4:42767162-42767181 | None:intergenic | 35.0% |
| ! | GTTCTTCATCGAAGTTTTCA+TGG | + | chr4_4:42767282-42767301 | Msa0681880:CDS | 35.0% |
| ! | AGTTTTCATGGAGAGATCAT+TGG | + | chr4_4:42767294-42767313 | Msa0681880:CDS | 35.0% |
| AAAACTACACTTACGGACAA+AGG | - | chr4_4:42767461-42767480 | None:intergenic | 35.0% | |
| TTAAGCCGTTTATCCAAACA+TGG | - | chr4_4:42767522-42767541 | None:intergenic | 35.0% | |
| ACTACTGTGATACCAAACAT+AGG | - | chr4_4:42767726-42767745 | None:intergenic | 35.0% | |
| CAGTAGTTATGTCAGAATCA+CGG | + | chr4_4:42767739-42767758 | Msa0681880:intron | 35.0% | |
| ACTTATTTGAGCTCATCTAC+TGG | - | chr4_4:42767888-42767907 | None:intergenic | 35.0% | |
| !! | ACTGACCTTTATGATTTGGT+TGG | + | chr4_4:42767970-42767989 | Msa0681880:intron | 35.0% |
| !!! | ATGATTTGGTTGGTTTTTGC+AGG | + | chr4_4:42767980-42767999 | Msa0681880:intron | 35.0% |
| GAAGGAAGGATAGATGAAAA+TGG | + | chr4_4:42768002-42768021 | Msa0681880:CDS | 35.0% | |
| AACTTGCAGTGTTCTTATCA+TGG | + | chr4_4:42768026-42768045 | Msa0681880:CDS | 35.0% | |
| ACTTGCAGTGTTCTTATCAT+GGG | + | chr4_4:42768027-42768046 | Msa0681880:CDS | 35.0% | |
| CGAGCTAAATACCCTAATTA+CGG | + | chr4_4:42768420-42768439 | Msa0681880:intron | 35.0% | |
| CTAAGAAACCACCGTAATTA+GGG | - | chr4_4:42768434-42768453 | None:intergenic | 35.0% | |
| TCTAAGAAACCACCGTAATT+AGG | - | chr4_4:42768435-42768454 | None:intergenic | 35.0% | |
| !!! | TCTGGTTTTACAAAGTCATC+AGG | - | chr4_4:42768564-42768583 | None:intergenic | 35.0% |
| TGAGCAAAATCAATGTGAGA+AGG | - | chr4_4:42768657-42768676 | None:intergenic | 35.0% | |
| !!! | CATTGATTTTGCTCATCACA+AGG | + | chr4_4:42768662-42768681 | Msa0681880:CDS | 35.0% |
| CACACTTCAACTTGACTTTA+TGG | + | chr4_4:42768694-42768713 | Msa0681880:intron | 35.0% | |
| ! | GGTTTTCAGTGTCTTAGAAA+GGG | - | chr4_4:42769251-42769270 | None:intergenic | 35.0% |
| ! | TGGTTTTCAGTGTCTTAGAA+AGG | - | chr4_4:42769252-42769271 | None:intergenic | 35.0% |
| GTGCTTGGGTACTTATAAAT+TGG | - | chr4_4:42769285-42769304 | None:intergenic | 35.0% | |
| TCCTTAAAAGCTAGCTATCA+AGG | + | chr4_4:42769317-42769336 | Msa0681880:intron | 35.0% | |
| CCTTAAAAGCTAGCTATCAA+GGG | + | chr4_4:42769318-42769337 | Msa0681880:intron | 35.0% | |
| CTTAAAAGCTAGCTATCAAG+GGG | + | chr4_4:42769319-42769338 | Msa0681880:intron | 35.0% | |
| GATGGTGTATTTATGTTGCT+TGG | - | chr4_4:42769350-42769369 | None:intergenic | 35.0% | |
| ATGCATATTGTTACATGTGC+AGG | + | chr4_4:42769391-42769410 | Msa0681880:intron | 35.0% | |
| GTAGTCATAACGTCAACTAT+TGG | - | chr4_4:42769467-42769486 | None:intergenic | 35.0% | |
| ! | CCAGGATTTTTGAATAGTGA+GGG | - | chr4_4:42769713-42769732 | None:intergenic | 35.0% |
| ! | TCCAGGATTTTTGAATAGTG+AGG | - | chr4_4:42769714-42769733 | None:intergenic | 35.0% |
| CTCTCAAACATCAAGTAGTA+TGG | - | chr4_4:42769750-42769769 | None:intergenic | 35.0% | |
| CATACTACTTGATGTTTGAG+AGG | + | chr4_4:42769748-42769767 | Msa0681880:intron | 35.0% | |
| ! | ATAAATTTGGAACTGATCCG+CGG | - | chr4_4:42770132-42770151 | None:intergenic | 35.0% |
| AACGAATGGAAAGAAAACAG+CGG | - | chr4_4:42770455-42770474 | None:intergenic | 35.0% | |
| ACAGCGAATAATTTCTGTCA+AGG | - | chr4_4:42770771-42770790 | None:intergenic | 35.0% | |
| ! | GATTTTCTTGTTCATGTCTC+AGG | + | chr4_4:42770923-42770942 | Msa0681880:intron | 35.0% |
| TTCCTAGATGGTATGAACAT+TGG | + | chr4_4:42770949-42770968 | Msa0681880:CDS | 35.0% | |
| TGAACATTGGACTTCAAACA+AGG | + | chr4_4:42770962-42770981 | Msa0681880:CDS | 35.0% | |
| AAATGCCAACACAAAACGAT+CGG | - | chr4_4:42771105-42771124 | None:intergenic | 35.0% | |
| !! | TACCTGACGTTTTGATAGTA+CGG | - | chr4_4:42771204-42771223 | None:intergenic | 35.0% |
| ! | TTTTTGCAGACGATGGAAAA+CGG | - | chr4_4:42771258-42771277 | None:intergenic | 35.0% |
| !!! | ATTCTTGTTTTTGCAGACGA+TGG | - | chr4_4:42771265-42771284 | None:intergenic | 35.0% |
| ! | CTAAAGTGTTCAGCTTGTAA+AGG | + | chr4_4:42771355-42771374 | Msa0681880:CDS | 35.0% |
| ! | TGAACGTGTTATTACTCCAA+AGG | + | chr4_4:42771580-42771599 | Msa0681880:exon | 35.0% |
| TACACATATTAACGTACACG+TGG | - | chr4_4:42771654-42771673 | None:intergenic | 35.0% | |
| ATCACGGATGATTATTTCGA+AGG | + | chr4_4:42771785-42771804 | Msa0681880:three_prime_UTR | 35.0% | |
| !!! | GGTTTTGGAGGTTTGTTTCT+TGG | - | chr4_4:42767083-42767102 | None:intergenic | 40.0% |
| !! | GAAAAGAGAAACGGTTTTGG+AGG | - | chr4_4:42767095-42767114 | None:intergenic | 40.0% |
| ! | TTTCGTTCTTTTCGGCTTCT+GGG | - | chr4_4:42767238-42767257 | None:intergenic | 40.0% |
| ! | ATTTCGTTCTTTTCGGCTTC+TGG | - | chr4_4:42767239-42767258 | None:intergenic | 40.0% |
| AAACATAGGCTAAGAGCTTC+TGG | - | chr4_4:42767712-42767731 | None:intergenic | 40.0% | |
| AGAAGCTCTTAGCCTATGTT+TGG | + | chr4_4:42767711-42767730 | Msa0681880:intron | 40.0% | |
| TAGTTATGTCAGAATCACGG+TGG | + | chr4_4:42767742-42767761 | Msa0681880:intron | 40.0% | |
| TGACTTTGTAGAAGCAAGGT+GGG | - | chr4_4:42767768-42767787 | None:intergenic | 40.0% | |
| ACCTTGCTTCTACAAAGTCA+CGG | + | chr4_4:42767768-42767787 | Msa0681880:intron | 40.0% | |
| !!! | TTTGGTTGGTTTTTGCAGGA+AGG | + | chr4_4:42767984-42768003 | Msa0681880:intron | 40.0% |
| ! | TATCATGGGTGGTCTTTTGA+TGG | + | chr4_4:42768041-42768060 | Msa0681880:CDS | 40.0% |
| TTTGTTTGGCCTGATGAGAA+TGG | + | chr4_4:42768182-42768201 | Msa0681880:CDS | 40.0% | |
| GCTAAATACCCTAATTACGG+TGG | + | chr4_4:42768423-42768442 | Msa0681880:intron | 40.0% | |
| TGTAAAACCAGAGTTTGCGA+CGG | + | chr4_4:42768572-42768591 | Msa0681880:CDS | 40.0% | |
| ! | ATTCAGCGCGATCTTTTCTA+CGG | + | chr4_4:42768600-42768619 | Msa0681880:CDS | 40.0% |
| AACTTGACTTTATGGTGTGC+TGG | + | chr4_4:42768702-42768721 | Msa0681880:intron | 40.0% | |
| ATGTGGTCCAAAGATTGTGA+AGG | + | chr4_4:42768820-42768839 | Msa0681880:intron | 40.0% | |
| TGTGGTCCAAAGATTGTGAA+GGG | + | chr4_4:42768821-42768840 | Msa0681880:intron | 40.0% | |
| !!! | GTCAAGGACAGTGCTTTTTT+AGG | + | chr4_4:42768957-42768976 | Msa0681880:intron | 40.0% |
| !!! | GATGTCTAGCTTTTAAGGGA+GGG | - | chr4_4:42769121-42769140 | None:intergenic | 40.0% |
| !!! | TGATGTCTAGCTTTTAAGGG+AGG | - | chr4_4:42769122-42769141 | None:intergenic | 40.0% |
| GCTCTCTATGATACCTTACT+TGG | + | chr4_4:42769197-42769216 | Msa0681880:intron | 40.0% | |
| ! | GATACCTTACTTGGTCTTTC+CGG | + | chr4_4:42769206-42769225 | Msa0681880:intron | 40.0% |
| TATAAGTACCCAAGCACTTG+AGG | + | chr4_4:42769288-42769307 | Msa0681880:intron | 40.0% | |
| !!! | CCCTTGATAGCTAGCTTTTA+AGG | - | chr4_4:42769321-42769340 | None:intergenic | 40.0% |
| ACCATCAAGCATTCCATTCA+GGG | + | chr4_4:42769364-42769383 | Msa0681880:intron | 40.0% | |
| GAGATATATGATGATAGGCG+TGG | - | chr4_4:42769527-42769546 | None:intergenic | 40.0% | |
| CCCTCACTATTCAAAAATCC+TGG | + | chr4_4:42769710-42769729 | Msa0681880:intron | 40.0% | |
| AAGTAGTATGGAATCAGCGA+CGG | - | chr4_4:42769738-42769757 | None:intergenic | 40.0% | |
| ! | TGCACAGTCAATTTCCCTTT+TGG | + | chr4_4:42769860-42769879 | Msa0681880:intron | 40.0% |
| ATTTCCACTCCATAGGTTAC+AGG | + | chr4_4:42770024-42770043 | Msa0681880:intron | 40.0% | |
| GAATCCATCTTGAATGGAAG+AGG | - | chr4_4:42770069-42770088 | None:intergenic | 40.0% | |
| !! | GCTTTTCAGGAGCTAATGAA+GGG | + | chr4_4:42770103-42770122 | Msa0681880:CDS | 40.0% |
| ! | TAAATTTGGAACTGATCCGC+GGG | - | chr4_4:42770131-42770150 | None:intergenic | 40.0% |
| ACGGTATCTACCTCGATATT+TGG | + | chr4_4:42770339-42770358 | Msa0681880:intron | 40.0% | |
| CCTCGATATTTGGATGATTG+CGG | + | chr4_4:42770349-42770368 | Msa0681880:intron | 40.0% | |
| !! | GCTGTTTTCTTTCCATTCGT+TGG | + | chr4_4:42770454-42770473 | Msa0681880:intron | 40.0% |
| TGAGCTTCAAAACCAACGAA+TGG | - | chr4_4:42770469-42770488 | None:intergenic | 40.0% | |
| GTGACCAGAAATGGGTAATA+TGG | + | chr4_4:42770545-42770564 | Msa0681880:CDS | 40.0% | |
| TCGAAATTTCTTCCAGCTCA+CGG | + | chr4_4:42770627-42770646 | Msa0681880:CDS | 40.0% | |
| TAGAAATCTTACTTGCCACC+AGG | - | chr4_4:42770665-42770684 | None:intergenic | 40.0% | |
| !!! | CGTGGTTTTATCGAAGAGAA+TGG | - | chr4_4:42770706-42770725 | None:intergenic | 40.0% |
| CTGTCAATGAAACATTCACG+TGG | - | chr4_4:42770724-42770743 | None:intergenic | 40.0% | |
| !! | AACCTCTAACATCGACTTCT+AGG | + | chr4_4:42770867-42770886 | Msa0681880:intron | 40.0% |
| ATCCTAGAAGTCGATGTTAG+AGG | - | chr4_4:42770872-42770891 | None:intergenic | 40.0% | |
| TTTCTTGTTCATGTCTCAGG+TGG | + | chr4_4:42770926-42770945 | Msa0681880:intron | 40.0% | |
| GTCCAATGTTCATACCATCT+AGG | - | chr4_4:42770954-42770973 | None:intergenic | 40.0% | |
| GGTGACATGATTGTACTTCA+AGG | + | chr4_4:42770993-42771012 | Msa0681880:CDS | 40.0% | |
| TGGCATTTAGAAATTGGCTG+AGG | + | chr4_4:42771117-42771136 | Msa0681880:CDS | 40.0% | |
| !! | CGTTTTGATAGTACGGTTGA+AGG | - | chr4_4:42771197-42771216 | None:intergenic | 40.0% |
| AACCGTACTATCAAAACGTC+AGG | + | chr4_4:42771199-42771218 | Msa0681880:CDS | 40.0% | |
| AGCTTGTAAAGGAGCTTATG+AGG | + | chr4_4:42771366-42771385 | Msa0681880:CDS | 40.0% | |
| GCTTGTAAAGGAGCTTATGA+GGG | + | chr4_4:42771367-42771386 | Msa0681880:CDS | 40.0% | |
| ! | TGATGTTTGCTCAGTTGGTA+TGG | - | chr4_4:42771911-42771930 | None:intergenic | 40.0% |
| !! | GTGGTTGAAAGTGCCATCAA+TGG | - | chr4_4:42767026-42767045 | None:intergenic | 45.0% |
| ! | TAGGGTTCAGTTTTTGTGGG+TGG | - | chr4_4:42767215-42767234 | None:intergenic | 45.0% |
| ! | GGGTAGGGTTCAGTTTTTGT+GGG | - | chr4_4:42767218-42767237 | None:intergenic | 45.0% |
| ! | TGGGTAGGGTTCAGTTTTTG+TGG | - | chr4_4:42767219-42767238 | None:intergenic | 45.0% |
| ! | TTCTTTTCGGCTTCTGGGTA+GGG | - | chr4_4:42767233-42767252 | None:intergenic | 45.0% |
| TGGGTCGTGAAATTGTGCTT+TGG | + | chr4_4:42767375-42767394 | Msa0681880:CDS | 45.0% | |
| GTGACTTTGTAGAAGCAAGG+TGG | - | chr4_4:42767769-42767788 | None:intergenic | 45.0% | |
| ACCGTGACTTTGTAGAAGCA+AGG | - | chr4_4:42767772-42767791 | None:intergenic | 45.0% | |
| TGCTTCTACAAAGTCACGGT+AGG | + | chr4_4:42767772-42767791 | Msa0681880:intron | 45.0% | |
| !!! | GTTGGTTTTTGCAGGAAGGA+AGG | + | chr4_4:42767988-42768007 | Msa0681880:intron | 45.0% |
| TGCAGTGTTCTTATCATGGG+TGG | + | chr4_4:42768030-42768049 | Msa0681880:CDS | 45.0% | |
| AACCTAGTAGCACAAGCTCT+AGG | - | chr4_4:42768134-42768153 | None:intergenic | 45.0% | |
| TGCTACTAGGTTTCCTACCT+TGG | + | chr4_4:42768142-42768161 | Msa0681880:CDS | 45.0% | |
| !! | TTTCCTACCTTGGTGTCTCA+GGG | + | chr4_4:42768152-42768171 | Msa0681880:CDS | 45.0% |
| CTCAGGGATTGCTCTTTGTT+TGG | + | chr4_4:42768168-42768187 | Msa0681880:CDS | 45.0% | |
| TTTGGCCTGATGAGAATGGT+TGG | + | chr4_4:42768186-42768205 | Msa0681880:CDS | 45.0% | |
| TTGGCCTGATGAGAATGGTT+GGG | + | chr4_4:42768187-42768206 | Msa0681880:CDS | 45.0% | |
| TTCTCCCAACCATTCTCATC+AGG | - | chr4_4:42768194-42768213 | None:intergenic | 45.0% | |
| CTACGGCTATGATACTCTCA+TGG | + | chr4_4:42768617-42768636 | Msa0681880:CDS | 45.0% | |
| GTCCAAAGATTGTGAAGGGA+GGG | + | chr4_4:42768825-42768844 | Msa0681880:intron | 45.0% | |
| TATCATAGAGAGCAGCCACT+GGG | - | chr4_4:42769190-42769209 | None:intergenic | 45.0% | |
| GAAGAGTTCCTCAAGTGCTT+GGG | - | chr4_4:42769299-42769318 | None:intergenic | 45.0% | |
| CACCATCAAGCATTCCATTC+AGG | + | chr4_4:42769363-42769382 | Msa0681880:intron | 45.0% | |
| TCCCTGAATGGAATGCTTGA+TGG | - | chr4_4:42769368-42769387 | None:intergenic | 45.0% | |
| TCAAGCATTCCATTCAGGGA+CGG | + | chr4_4:42769368-42769387 | Msa0681880:intron | 45.0% | |
| AATATGCATCCGTCCCTGAA+TGG | - | chr4_4:42769380-42769399 | None:intergenic | 45.0% | |
| GTGCAAGCAGAAAAACAGTG+AGG | + | chr4_4:42769773-42769792 | Msa0681880:intron | 45.0% | |
| CAAGCAGAAAAACAGTGAGG+CGG | + | chr4_4:42769776-42769795 | Msa0681880:intron | 45.0% | |
| GAAAAACAGTGAGGCGGTAT+AGG | + | chr4_4:42769782-42769801 | Msa0681880:intron | 45.0% | |
| TCTCTCCTTCCTGTAACCTA+TGG | - | chr4_4:42770036-42770055 | None:intergenic | 45.0% | |
| CATCTTGAATGGAAGAGGCT+TGG | - | chr4_4:42770064-42770083 | None:intergenic | 45.0% | |
| CAAGCCTCTTCCATTCAAGA+TGG | + | chr4_4:42770062-42770081 | Msa0681880:CDS | 45.0% | |
| CCACGTGAATCCATCTTGAA+TGG | - | chr4_4:42770075-42770094 | None:intergenic | 45.0% | |
| ! | CCATTCAAGATGGATTCACG+TGG | + | chr4_4:42770072-42770091 | Msa0681880:CDS | 45.0% |
| ! | AGATGGATTCACGTGGTTCA+TGG | + | chr4_4:42770079-42770098 | Msa0681880:CDS | 45.0% |
| ! | GATGGATTCACGTGGTTCAT+GGG | + | chr4_4:42770080-42770099 | Msa0681880:CDS | 45.0% |
| ATGGATTCACGTGGTTCATG+GGG | + | chr4_4:42770081-42770100 | Msa0681880:CDS | 45.0% | |
| !! | GGCTTTTCAGGAGCTAATGA+AGG | + | chr4_4:42770102-42770121 | Msa0681880:CDS | 45.0% |
| TACTTTCATGCAAAGGCCAC+TGG | - | chr4_4:42770184-42770203 | None:intergenic | 45.0% | |
| CCGCAATCATCCAAATATCG+AGG | - | chr4_4:42770352-42770371 | None:intergenic | 45.0% | |
| ATGTTCCTTCAATGTCCCCA+TGG | + | chr4_4:42770570-42770589 | Msa0681880:CDS | 45.0% | |
| ! | ATTTCGAGCACTGCAAACGA+TGG | - | chr4_4:42770614-42770633 | None:intergenic | 45.0% |
| ! | CGTTAGGATTTGCTTGTTCC+TGG | - | chr4_4:42770904-42770923 | None:intergenic | 45.0% |
| TTTCTCGCAGAAACCGAGAA+TGG | + | chr4_4:42771029-42771048 | Msa0681880:CDS | 45.0% | |
| GTTAATGTCACCGCCATTCT+CGG | - | chr4_4:42771045-42771064 | None:intergenic | 45.0% | |
| AATGGCCAACCTGAATGGTT+CGG | + | chr4_4:42771149-42771168 | Msa0681880:CDS | 45.0% | |
| GATAGTACGGTTGAAGGCAA+TGG | - | chr4_4:42771191-42771210 | None:intergenic | 45.0% | |
| ! | TACTCAGCTGCGCATAGTTT+TGG | + | chr4_4:42771462-42771481 | Msa0681880:CDS | 45.0% |
| !! | ATATGAATATTATAAAAAAT+TGG | + | chr4_4:42769563-42769582 | Msa0681880:intron | 5.0% |
| !! | ATTTACATAATATAAAAAAT+TGG | + | chr4_4:42769685-42769704 | Msa0681880:intron | 5.0% |
| ! | GTTCTTTTCGGCTTCTGGGT+AGG | - | chr4_4:42767234-42767253 | None:intergenic | 50.0% |
| TGAAACGGCGTAGGCAAACT+AGG | - | chr4_4:42767350-42767369 | None:intergenic | 50.0% | |
| TCACGACCCAGAAGCTGAAA+CGG | - | chr4_4:42767365-42767384 | None:intergenic | 50.0% | |
| GACAAAGGAGCAAGACGATG+AGG | - | chr4_4:42767446-42767465 | None:intergenic | 50.0% | |
| !! | TGGTCTTTTGATGGACGTGG+AGG | + | chr4_4:42768050-42768069 | Msa0681880:CDS | 50.0% |
| ! | CTCCTAGAGCTTGTGCTACT+AGG | + | chr4_4:42768129-42768148 | Msa0681880:CDS | 50.0% |
| !! | GTTTCCTACCTTGGTGTCTC+AGG | + | chr4_4:42768151-42768170 | Msa0681880:CDS | 50.0% |
| AATCCCTGAGACACCAAGGT+AGG | - | chr4_4:42768158-42768177 | None:intergenic | 50.0% | |
| ATGTTCACCGTCGCAAACTC+TGG | - | chr4_4:42768582-42768601 | None:intergenic | 50.0% | |
| GGTCCAAAGATTGTGAAGGG+AGG | + | chr4_4:42768824-42768843 | Msa0681880:intron | 50.0% | |
| ! | ATTGTGAAGGGAGGGCCTTT+TGG | + | chr4_4:42768833-42768852 | Msa0681880:intron | 50.0% |
| TAAGTACCCAACCAACCACC+CGG | + | chr4_4:42769091-42769110 | Msa0681880:intron | 50.0% | |
| GTATCATAGAGAGCAGCCAC+TGG | - | chr4_4:42769191-42769210 | None:intergenic | 50.0% | |
| CTGACCGGAAAGACCAAGTA+AGG | - | chr4_4:42769213-42769232 | None:intergenic | 50.0% | |
| TTAGAAAGGGCTCCCTATGG+AGG | - | chr4_4:42769238-42769257 | None:intergenic | 50.0% | |
| GTCTTAGAAAGGGCTCCCTA+TGG | - | chr4_4:42769241-42769260 | None:intergenic | 50.0% | |
| GGAAGAGTTCCTCAAGTGCT+TGG | - | chr4_4:42769300-42769319 | None:intergenic | 50.0% | |
| AGTGAGGCGGTATAGGAGAT+GGG | + | chr4_4:42769789-42769808 | Msa0681880:intron | 50.0% | |
| CCTTCCTGTAACCTATGGAG+TGG | - | chr4_4:42770031-42770050 | None:intergenic | 50.0% | |
| CCACTCCATAGGTTACAGGA+AGG | + | chr4_4:42770028-42770047 | Msa0681880:intron | 50.0% | |
| TGGATGATTGCGGCATCATG+TGG | + | chr4_4:42770359-42770378 | Msa0681880:intron | 50.0% | |
| !! | ATTTCTGGTCACCAACCACG+GGG | - | chr4_4:42770537-42770556 | None:intergenic | 50.0% |
| !! | CATTTCTGGTCACCAACCAC+GGG | - | chr4_4:42770538-42770557 | None:intergenic | 50.0% |
| !! | CCATTTCTGGTCACCAACCA+CGG | - | chr4_4:42770539-42770558 | None:intergenic | 50.0% |
| !! | CGTGGTTGGTGACCAGAAAT+GGG | + | chr4_4:42770537-42770556 | Msa0681880:CDS | 50.0% |
| AATCTTACTTGCCACCAGGC+AGG | - | chr4_4:42770661-42770680 | None:intergenic | 50.0% | |
| TGTCTCAGGTGGTTCCTAGA+TGG | + | chr4_4:42770937-42770956 | Msa0681880:intron | 50.0% | |
| ACAAAACGATCGGCCTGTGT+TGG | - | chr4_4:42771095-42771114 | None:intergenic | 50.0% | |
| ! | ACAGGCCGATCGTTTTGTGT+TGG | + | chr4_4:42771097-42771116 | Msa0681880:CDS | 50.0% |
| AGAAATTGGCTGAGGCGACA+CGG | + | chr4_4:42771125-42771144 | Msa0681880:CDS | 50.0% | |
| TCTTGCCGAACCATTCAGGT+TGG | - | chr4_4:42771157-42771176 | None:intergenic | 50.0% | |
| ACACAACTGTTGCACCAGTC+AGG | - | chr4_4:42771414-42771433 | None:intergenic | 50.0% | |
| ! | GTTGTGTTTTGCGCGACTTC+TGG | + | chr4_4:42771427-42771446 | Msa0681880:CDS | 50.0% |
| ATGCGCAGCTGAGTATCTGA+TGG | - | chr4_4:42771457-42771476 | None:intergenic | 50.0% | |
| CCTACGCCGTTTCAGCTTCT+GGG | + | chr4_4:42767356-42767375 | Msa0681880:CDS | 55.0% | |
| !! | GGGTGGTCTTTTGATGGACG+TGG | + | chr4_4:42768047-42768066 | Msa0681880:CDS | 55.0% |
| AGGTTGCACTGTGATCCCTC+AGG | + | chr4_4:42768070-42768089 | Msa0681880:CDS | 55.0% | |
| ATCCCTCAGGCTTCACCTGA+AGG | + | chr4_4:42768083-42768102 | Msa0681880:CDS | 55.0% | |
| GACCTTCAGGTGAAGCCTGA+GGG | - | chr4_4:42768088-42768107 | None:intergenic | 55.0% | |
| TCAGGCTTCACCTGAAGGTC+CGG | + | chr4_4:42768088-42768107 | Msa0681880:CDS | 55.0% | |
| GAGCAATCCCTGAGACACCA+AGG | - | chr4_4:42768162-42768181 | None:intergenic | 55.0% | |
| GGCCCTCCCTTCACAATCTT+TGG | - | chr4_4:42768830-42768849 | None:intergenic | 55.0% | |
| AAGTACCCAACCAACCACCC+GGG | + | chr4_4:42769092-42769111 | Msa0681880:intron | 55.0% | |
| !! | CTTTTAAGGGAGGGTTCCCC+GGG | - | chr4_4:42769112-42769131 | None:intergenic | 55.0% |
| !! | GCTTTTAAGGGAGGGTTCCC+CGG | - | chr4_4:42769113-42769132 | None:intergenic | 55.0% |
| TCGGCTCTCCTGGGATGTTT+GGG | - | chr4_4:42769164-42769183 | None:intergenic | 55.0% | |
| ! | ATCGGCTCTCCTGGGATGTT+TGG | - | chr4_4:42769165-42769184 | None:intergenic | 55.0% |
| ATGGAATCAGCGACGGATCC+AGG | - | chr4_4:42769731-42769750 | None:intergenic | 55.0% | |
| CAGTGAGGCGGTATAGGAGA+TGG | + | chr4_4:42769788-42769807 | Msa0681880:intron | 55.0% | |
| AGGCGGTATAGGAGATGGGT+GGG | + | chr4_4:42769793-42769812 | Msa0681880:intron | 55.0% | |
| ! | CGTGGTTCATGGGGCTTTTC+AGG | + | chr4_4:42770090-42770109 | Msa0681880:CDS | 55.0% |
| GAGCTAATGAAGGGAACCCG+CGG | + | chr4_4:42770112-42770131 | Msa0681880:CDS | 55.0% | |
| GATCGATACCAAACTCCCCG+TGG | + | chr4_4:42770519-42770538 | Msa0681880:CDS | 55.0% | |
| GATACCAAACTCCCCGTGGT+TGG | + | chr4_4:42770523-42770542 | Msa0681880:CDS | 55.0% | |
| !! | CCGTGGTTGGTGACCAGAAA+TGG | + | chr4_4:42770536-42770555 | Msa0681880:CDS | 55.0% |
| ! | AGGTGCCATGGGGACATTGA+AGG | - | chr4_4:42770578-42770597 | None:intergenic | 55.0% |
| TTCAATGTCCCCATGGCACC+TGG | + | chr4_4:42770577-42770596 | Msa0681880:CDS | 55.0% | |
| ! | GAGTCTTACCAGGTGCCATG+GGG | - | chr4_4:42770588-42770607 | None:intergenic | 55.0% |
| ! | CGAGTCTTACCAGGTGCCAT+GGG | - | chr4_4:42770589-42770608 | None:intergenic | 55.0% |
| ACGATGGAGCGAGTCTTACC+AGG | - | chr4_4:42770598-42770617 | None:intergenic | 55.0% | |
| CTCGCAGAAACCGAGAATGG+CGG | + | chr4_4:42771032-42771051 | Msa0681880:CDS | 55.0% | |
| ! | CCTGTGTTGGTGTGAAGGTG+AGG | - | chr4_4:42771082-42771101 | None:intergenic | 55.0% |
| CCTCACCTTCACACCAACAC+AGG | + | chr4_4:42771079-42771098 | Msa0681880:CDS | 55.0% | |
| ! | ATCGGCCTGTGTTGGTGTGA+AGG | - | chr4_4:42771087-42771106 | None:intergenic | 55.0% |
| ACGGCAATGGCCAACCTGAA+TGG | + | chr4_4:42771144-42771163 | Msa0681880:CDS | 55.0% | |
| CTGCTCTTGCCGAACCATTC+AGG | - | chr4_4:42771161-42771180 | None:intergenic | 55.0% | |
| GTACGGTTGAAGGCAATGGC+TGG | - | chr4_4:42771187-42771206 | None:intergenic | 55.0% | |
| GCCTACGCCGTTTCAGCTTC+TGG | + | chr4_4:42767355-42767374 | Msa0681880:CDS | 60.0% | |
| CCCAGAAGCTGAAACGGCGT+AGG | - | chr4_4:42767359-42767378 | None:intergenic | 60.0% | |
| GGACCTTCAGGTGAAGCCTG+AGG | - | chr4_4:42768089-42768108 | None:intergenic | 60.0% | |
| GATCCAACAGCACGCGCTTC+CGG | - | chr4_4:42768110-42768129 | None:intergenic | 60.0% | |
| AGTACCCAACCAACCACCCG+GGG | + | chr4_4:42769093-42769112 | Msa0681880:intron | 60.0% | |
| ACTCCACCCCCAAACATCCC+AGG | + | chr4_4:42769153-42769172 | Msa0681880:intron | 60.0% | |
| TCTCCTGGGATGTTTGGGGG+TGG | - | chr4_4:42769159-42769178 | None:intergenic | 60.0% | |
| GGCTCTCCTGGGATGTTTGG+GGG | - | chr4_4:42769162-42769181 | None:intergenic | 60.0% | |
| CGGCTCTCCTGGGATGTTTG+GGG | - | chr4_4:42769163-42769182 | None:intergenic | 60.0% | |
| !! | ACTGGGACATCGGCTCTCCT+GGG | - | chr4_4:42769173-42769192 | None:intergenic | 60.0% |
| GAGAGCAGCCACTGGGACAT+CGG | - | chr4_4:42769183-42769202 | None:intergenic | 60.0% | |
| TTTCCGGTCAGCGCCTCCAT+AGG | + | chr4_4:42769222-42769241 | Msa0681880:intron | 60.0% | |
| TTCCGGTCAGCGCCTCCATA+GGG | + | chr4_4:42769223-42769242 | Msa0681880:intron | 60.0% | |
| GAGGCGGTATAGGAGATGGG+TGG | + | chr4_4:42769792-42769811 | Msa0681880:intron | 60.0% | |
| GTCACCAACCACGGGGAGTT+TGG | - | chr4_4:42770530-42770549 | None:intergenic | 60.0% | |
| GCGAGTCTTACCAGGTGCCA+TGG | - | chr4_4:42770590-42770609 | None:intergenic | 60.0% | |
| TTCTTCCAGCTCACGGTGCC+AGG | + | chr4_4:42770634-42770653 | Msa0681880:CDS | 60.0% | |
| ! | TCTTCCAGCTCACGGTGCCA+GGG | + | chr4_4:42770635-42770654 | Msa0681880:CDS | 60.0% |
| ! | GGTTCCCCGGGTGGTTGGTT+GGG | - | chr4_4:42769100-42769119 | None:intergenic | 65.0% |
| TTAAGGGAGGGTTCCCCGGG+TGG | - | chr4_4:42769109-42769128 | None:intergenic | 65.0% | |
| !! | CACTGGGACATCGGCTCTCC+TGG | - | chr4_4:42769174-42769193 | None:intergenic | 65.0% |
| CAGGAGAGCCGATGTCCCAG+TGG | + | chr4_4:42769172-42769191 | Msa0681880:intron | 65.0% | |
| !! | CTCCCTATGGAGGCGCTGAC+CGG | - | chr4_4:42769228-42769247 | None:intergenic | 65.0% |
| TGGCTGAGGCGACACGGCAA+TGG | + | chr4_4:42771131-42771150 | Msa0681880:CDS | 65.0% | |
| GCACGCGCTTCCGGACCTTC+AGG | - | chr4_4:42768101-42768120 | None:intergenic | 70.0% | |
| ! | GGTCCGGAAGCGCGTGCTGT+TGG | + | chr4_4:42768104-42768123 | Msa0681880:CDS | 70.0% |
| GGGTTCCCCGGGTGGTTGGT+TGG | - | chr4_4:42769101-42769120 | None:intergenic | 70.0% | |
| ACTTGCCACCAGGCAGGCCC+TGG | - | chr4_4:42770655-42770674 | None:intergenic | 70.0% | |
| GGGAGGGTTCCCCGGGTGGT+TGG | - | chr4_4:42769105-42769124 | None:intergenic | 75.0% | |
| CAGGCCCTGGCACCGTGAGC+TGG | - | chr4_4:42770642-42770661 | None:intergenic | 75.0% | |
| ! | TCACGGTGCCAGGGCCTGCC+TGG | + | chr4_4:42770644-42770663 | Msa0681880:CDS | 75.0% |
| !! | CGGTGCCAGGGCCTGCCTGG+TGG | + | chr4_4:42770647-42770666 | Msa0681880:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 42766903 | 42771931 | 42766903 | ID=Msa0681880;Name=Msa0681880 |
| chr4_4 | mRNA | 42766903 | 42771931 | 42766903 | ID=Msa0681880-mRNA-1;Parent=Msa0681880;Name=Msa0681880-mRNA-1;_AED=0.01;_eAED=0.01;_QI=126|1|1|1|1|1|7|349|542 |
| chr4_4 | exon | 42766903 | 42767466 | 42766903 | ID=Msa0681880-mRNA-1:exon:10248;Parent=Msa0681880-mRNA-1 |
| chr4_4 | exon | 42768002 | 42768237 | 42768002 | ID=Msa0681880-mRNA-1:exon:10249;Parent=Msa0681880-mRNA-1 |
| chr4_4 | exon | 42768557 | 42768683 | 42768557 | ID=Msa0681880-mRNA-1:exon:10250;Parent=Msa0681880-mRNA-1 |
| chr4_4 | exon | 42770039 | 42770175 | 42770039 | ID=Msa0681880-mRNA-1:exon:10251;Parent=Msa0681880-mRNA-1 |
| chr4_4 | exon | 42770513 | 42770672 | 42770513 | ID=Msa0681880-mRNA-1:exon:10252;Parent=Msa0681880-mRNA-1 |
| chr4_4 | exon | 42770945 | 42771220 | 42770945 | ID=Msa0681880-mRNA-1:exon:10253;Parent=Msa0681880-mRNA-1 |
| chr4_4 | exon | 42771328 | 42771931 | 42771328 | ID=Msa0681880-mRNA-1:exon:10254;Parent=Msa0681880-mRNA-1 |
| chr4_4 | five_prime_UTR | 42766903 | 42767028 | 42766903 | ID=Msa0681880-mRNA-1:five_prime_utr;Parent=Msa0681880-mRNA-1 |
| chr4_4 | CDS | 42767029 | 42767466 | 42767029 | ID=Msa0681880-mRNA-1:cds;Parent=Msa0681880-mRNA-1 |
| chr4_4 | CDS | 42768002 | 42768237 | 42768002 | ID=Msa0681880-mRNA-1:cds;Parent=Msa0681880-mRNA-1 |
| chr4_4 | CDS | 42768557 | 42768683 | 42768557 | ID=Msa0681880-mRNA-1:cds;Parent=Msa0681880-mRNA-1 |
| chr4_4 | CDS | 42770039 | 42770175 | 42770039 | ID=Msa0681880-mRNA-1:cds;Parent=Msa0681880-mRNA-1 |
| chr4_4 | CDS | 42770513 | 42770672 | 42770513 | ID=Msa0681880-mRNA-1:cds;Parent=Msa0681880-mRNA-1 |
| chr4_4 | CDS | 42770945 | 42771220 | 42770945 | ID=Msa0681880-mRNA-1:cds;Parent=Msa0681880-mRNA-1 |
| chr4_4 | CDS | 42771328 | 42771582 | 42771328 | ID=Msa0681880-mRNA-1:cds;Parent=Msa0681880-mRNA-1 |
| chr4_4 | three_prime_UTR | 42771583 | 42771931 | 42771583 | ID=Msa0681880-mRNA-1:three_prime_utr;Parent=Msa0681880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
