AlfalfaGEDB | Msa0853810

M. sativa cultivar zhongmu-4 / Msa0853810

KEGG: K17506
GO: GO:0001101 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009536 GO:0009605 GO:0009607 GO:0009611 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009987 GO:0010033 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0023052 GO:0032870 GO:0033993 GO:0036211 GO:0042221 GO:0042578 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0098542 GO:0140096 GO:1901564 GO:1901700 GO:1901701
PFAM: PF00481.24

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0853810	XP_003615726.1	99.206	378	3	0	1	378	1	378	0.0	776

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0853810	sp\|Q8RX37\|P2C02_ARATH	62.725	389	121	7	1	376	1	378	3.50e-159	454

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0853810	G7JZL5	99.206	378	3	0	1	378	1	378	0.0	776

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0060070	Msa0853810	0.804588	2.010347e-49	-8.615850e-47
Msa0071480	Msa0853810	0.829613	4.666304e-55	-8.615850e-47
Msa0081940	Msa0853810	0.804264	2.347973e-49	-8.615850e-47
Msa0119440	Msa0853810	0.880751	4.239978e-70	-8.615850e-47
Msa0748660	Msa0853810	0.827429	1.572312e-54	-8.615850e-47
Msa0758250	Msa0853810	0.827885	1.221974e-54	-8.615850e-47
Msa0764920	Msa0853810	0.820746	5.829602e-53	-8.615850e-47
Msa0775920	Msa0853810	0.902204	1.230877e-78	-8.615850e-47
Msa0813260	Msa0853810	0.958936	6.829048e-117	-8.615850e-47
Msa0128430	Msa0853810	0.810567	1.080938e-50	-8.615850e-47
Msa0162690	Msa0853810	0.867650	1.170207e-65	-8.615850e-47
Msa0194010	Msa0853810	0.829060	6.358628e-55	-8.615850e-47
Msa0213430	Msa0853810	0.806106	9.665124e-50	-8.615850e-47
Msa0235880	Msa0853810	0.829731	4.368377e-55	-8.615850e-47
Msa0364790	Msa0853810	0.807236	5.577815e-50	-8.615850e-47
Msa0418400	Msa0853810	0.854943	8.788519e-62	-8.615850e-47
Msa0426560	Msa0853810	0.801960	7.034770e-49	-8.615850e-47
Msa0437070	Msa0853810	0.802131	6.488149e-49	-8.615850e-47
Msa0463490	Msa0853810	0.801605	8.323177e-49	-8.615850e-47
Msa0472710	Msa0853810	0.844260	8.442493e-59	-8.615850e-47
Msa0472720	Msa0853810	0.800585	1.344927e-48	-8.615850e-47
Msa0472770	Msa0853810	0.859331	4.454679e-63	-8.615850e-47
Msa0240270	Msa0853810	0.812670	3.771889e-51	-8.615850e-47
Msa0259440	Msa0853810	0.808135	3.593895e-50	-8.615850e-47
Msa0259580	Msa0853810	0.802226	6.203685e-49	-8.615850e-47
Msa0282720	Msa0853810	0.822378	2.446015e-53	-8.615850e-47
Msa0305620	Msa0853810	0.833673	4.660252e-56	-8.615850e-47
Msa0358110	Msa0853810	0.844733	6.296984e-59	-8.615850e-47
Msa0358120	Msa0853810	0.803759	2.990229e-49	-8.615850e-47
Msa0517610	Msa0853810	0.804067	2.581045e-49	-8.615850e-47
Msa0583670	Msa0853810	0.815573	8.627100e-52	-8.615850e-47
Msa0844610	Msa0853810	0.815499	8.960595e-52	-8.615850e-47
Msa0853810	Msa0860250	0.812351	4.429997e-51	-8.615850e-47
Msa0853810	Msa0865970	0.819659	1.033950e-52	-8.615850e-47
Msa0853810	Msa0866070	0.816009	6.895266e-52	-8.615850e-47
Msa0853810	Msa0964960	0.847040	1.487268e-59	-8.615850e-47
Msa0853810	Msa0968050	0.823539	1.311858e-53	-8.615850e-47
Msa0853810	Msa0973070	0.805589	1.240727e-49	-8.615850e-47
Msa0853810	Msa1034700	0.834891	2.305543e-56	-8.615850e-47
Msa0853810	Msa1074540	0.868005	8.999565e-66	-8.615850e-47
Msa0853810	Msa1123720	0.802942	4.414598e-49	-8.615850e-47
Msa0853810	Msa1184750	0.808034	3.775673e-50	-8.615850e-47
Msa0853810	Msa1184780	0.814063	1.864315e-51	-8.615850e-47
Msa0853810	Msa1225100	0.842492	2.501184e-58	-8.615850e-47
Msa0853810	Msa1238690	0.825517	4.490151e-54	-8.615850e-47
Msa0853810	Msa1280150	0.827179	1.805206e-54	-8.615850e-47
Msa0853810	Msa1280170	0.800010	1.761363e-48	-8.615850e-47
Msa0853810	Msa1285200	0.854799	9.677520e-62	-8.615850e-47
Msa0853810	Msa1323280	0.805534	1.274240e-49	-8.615850e-47
Msa0853810	Msa1329870	0.842952	1.888369e-58	-8.615850e-47
Msa0853810	Msa1361250	0.837282	5.697789e-57	-8.615850e-47
Msa0853810	Msa1389760	0.810395	1.177674e-50	-8.615850e-47
Msa0853810	Msa1391550	0.815157	1.067404e-51	-8.615850e-47
Msa0853810	Msa1405220	0.842144	3.092842e-58	-8.615850e-47
Msa0853810	Msa1421900	0.854147	1.493367e-61	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0853810	MtrunA17_Chr5g0430481	99.206	378	3	0	1	378	1	378	0.0	776
Msa0853810	MtrunA17_Chr3g0105371	62.632	380	102	4	1	378	1	342	3.32e-163	461
Msa0853810	MtrunA17_Chr3g0105351	73.810	294	75	2	87	378	25	318	1.28e-162	458
Msa0853810	MtrunA17_Chr1g0150451	40.392	255	139	4	124	374	78	323	8.67e-56	186
Msa0853810	MtrunA17_Chr3g0136711	39.608	255	141	4	124	374	35	280	1.33e-54	182
Msa0853810	MtrunA17_Chr1g0212961	39.062	256	137	7	123	374	97	337	8.08e-54	181
Msa0853810	MtrunA17_Chr3g0126511	38.760	258	143	5	123	376	96	342	9.86e-51	174
Msa0853810	MtrunA17_Chr4g0065141	36.704	267	133	7	131	372	93	348	1.04e-45	161
Msa0853810	MtrunA17_Chr5g0426141	38.996	259	140	10	124	375	35	282	4.98e-45	156
Msa0853810	MtrunA17_Chr4g0070871	38.583	254	122	6	154	375	253	504	3.82e-44	159
Msa0853810	MtrunA17_Chr3g0115851	37.984	258	144	8	124	375	35	282	1.13e-43	152
Msa0853810	MtrunA17_Chr2g0317021	39.147	258	141	8	124	375	86	333	5.90e-43	152
Msa0853810	MtrunA17_Chr4g0050381	37.931	261	140	11	124	375	30	277	1.06e-42	150
Msa0853810	MtrunA17_Chr8g0360351	38.521	257	142	7	124	374	35	281	3.68e-41	146
Msa0853810	MtrunA17_Chr3g0112291	32.277	347	186	9	64	376	46	377	1.88e-39	144
Msa0853810	MtrunA17_Chr2g0279151	38.710	248	131	8	136	375	47	281	4.11e-39	140
Msa0853810	MtrunA17_Chr3g0138281	36.226	265	135	7	131	372	90	343	8.23e-39	142
Msa0853810	MtrunA17_Chr1g0171571	33.459	266	155	4	124	375	388	645	8.56e-39	146
Msa0853810	MtrunA17_Chr2g0299981	32.268	313	140	9	131	375	228	536	1.63e-37	142
Msa0853810	MtrunA17_Chr2g0293811	33.333	249	143	5	143	374	89	331	4.34e-37	137
Msa0853810	MtrunA17_Chr3g0135961	34.351	262	135	7	149	375	281	540	2.52e-36	139
Msa0853810	MtrunA17_Chr4g0051661	38.589	241	134	8	136	372	165	395	4.29e-36	135
Msa0853810	MtrunA17_Chr5g0407161	33.333	261	149	7	129	372	91	343	8.56e-36	134
Msa0853810	MtrunA17_Chr1g0150781	32.219	329	157	10	107	375	222	544	2.71e-35	135
Msa0853810	MtrunA17_Chr5g0435721	37.131	237	129	5	124	343	193	426	7.41e-35	134
Msa0853810	MtrunA17_Chr1g0158781	37.405	262	146	6	131	375	120	380	8.23e-35	132
Msa0853810	MtrunA17_Chr1g0194191	31.502	273	156	7	127	374	83	349	1.14e-33	129
Msa0853810	MtrunA17_Chr3g0144111	34.956	226	115	5	153	372	26	225	1.69e-33	125
Msa0853810	MtrunA17_Chr8g0389921	34.855	241	139	5	152	375	196	435	2.82e-32	126
Msa0853810	MtrunA17_Chr7g0263281	34.529	223	104	6	154	335	71	292	5.21e-32	124
Msa0853810	MtrunA17_Chr1g0150071	32.246	276	115	9	124	337	24	289	4.28e-31	121
Msa0853810	MtrunA17_Chr3g0136811	31.295	278	120	9	124	339	24	292	3.54e-30	119
Msa0853810	MtrunA17_Chr3g0127091	30.479	292	147	10	130	374	67	349	9.77e-29	115
Msa0853810	MtrunA17_Chr4g0001761	30.147	272	120	8	124	334	24	286	3.14e-28	113
Msa0853810	MtrunA17_Chr1g0213351	30.769	286	140	10	145	374	71	354	5.67e-28	113
Msa0853810	MtrunA17_Chr5g0396731	33.212	274	150	7	131	374	80	350	2.63e-27	110
Msa0853810	MtrunA17_Chr1g0181901	31.839	223	110	6	154	335	76	297	2.65e-27	111
Msa0853810	MtrunA17_Chr7g0256751	34.836	244	114	8	134	336	52	291	6.00e-27	111
Msa0853810	MtrunA17_Chr1g0211251	30.804	224	113	6	154	336	81	303	2.30e-25	106
Msa0853810	MtrunA17_Chr3g0089721	32.922	243	118	9	136	337	53	291	2.83e-25	105
Msa0853810	MtrunA17_Chr3g0089711	32.510	243	119	9	136	337	53	291	5.62e-25	104
Msa0853810	MtrunA17_Chr7g0256771	32.319	263	123	10	134	353	53	303	7.97e-25	103
Msa0853810	MtrunA17_Chr2g0286951	29.470	302	152	13	124	375	52	342	2.57e-24	103
Msa0853810	MtrunA17_Chr1g0175381	29.032	279	141	9	153	376	78	354	3.17e-24	102
Msa0853810	MtrunA17_Chr4g0066371	28.521	284	147	11	137	375	69	341	6.00e-24	102
Msa0853810	MtrunA17_Chr7g0271971	29.960	247	144	8	148	374	60	297	1.10e-23	101
Msa0853810	MtrunA17_Chr1g0207571	30.131	229	114	6	154	338	61	287	3.51e-23	99.8
Msa0853810	MtrunA17_Chr7g0250061	30.357	224	114	8	154	336	76	298	4.06e-23	99.8
Msa0853810	MtrunA17_Chr6g0483411	29.237	236	137	7	130	338	51	283	3.03e-22	96.3
Msa0853810	MtrunA17_Chr8g0371321	29.018	224	117	6	154	336	79	301	8.29e-22	95.9
Msa0853810	MtrunA17_Chr1g0192471	27.372	274	167	10	124	374	33	297	8.01e-21	93.2
Msa0853810	MtrunA17_Chr2g0294291	28.889	225	119	6	154	337	75	299	2.15e-20	91.7
Msa0853810	MtrunA17_Chr1g0209451	25.830	271	172	7	123	374	37	297	2.57e-20	92.0
Msa0853810	MtrunA17_Chr4g0004971	29.020	255	135	9	125	334	49	302	5.89e-20	90.1
Msa0853810	MtrunA17_Chr7g0225501	30.645	248	145	10	148	374	78	319	1.06e-19	90.1
Msa0853810	MtrunA17_Chr3g0133801	27.984	243	152	9	148	374	60	295	3.63e-19	88.6
Msa0853810	MtrunA17_Chr1g0153671	28.395	243	151	9	148	374	59	294	4.69e-19	88.2
Msa0853810	MtrunA17_Chr7g0243571	27.863	262	136	10	125	334	63	323	1.49e-16	80.9
Msa0853810	MtrunA17_Chr4g0063111	31.698	265	129	14	136	362	60	310	1.66e-16	80.9
Msa0853810	MtrunA17_Chr1g0192421	28.188	298	171	12	117	372	52	348	2.75e-16	79.3
Msa0853810	MtrunA17_Chr4g0067711	27.652	264	143	11	116	334	51	311	4.79e-16	78.6
Msa0853810	MtrunA17_Chr7g0272061	27.508	309	172	13	117	374	54	361	6.69e-16	78.6
Msa0853810	MtrunA17_Chr6g0486661	28.253	269	140	10	151	374	121	381	8.52e-16	79.3
Msa0853810	MtrunA17_Chr2g0295401	25.436	287	171	12	126	370	64	349	2.46e-15	76.6
Msa0853810	MtrunA17_Chr3g0089691	31.088	193	92	7	186	337	13	205	4.14e-15	75.5
Msa0853810	MtrunA17_Chr7g0221691	26.937	271	135	10	125	334	100	368	2.53e-14	73.9
Msa0853810	MtrunA17_Chr1g0151781	30.556	252	131	11	125	335	40	288	5.24e-14	72.4
Msa0853810	MtrunA17_Chr1g0185141	24.632	272	142	9	161	377	178	441	2.22e-13	72.0
Msa0853810	MtrunA17_Chr7g0249421	25.899	278	137	10	125	334	67	343	2.50e-12	68.2
Msa0853810	MtrunA17_Chr5g0394181	27.037	270	166	13	131	377	339	600	3.55e-11	64.7
Msa0853810	MtrunA17_Chr1g0187481	23.913	230	145	6	149	374	74	277	3.80e-11	63.2
Msa0853810	MtrunA17_Chr4g0068971	29.688	128	78	3	253	374	110	231	7.83e-11	62.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0853810	AT1G07160.1	62.725	389	121	7	1	376	1	378	3.55e-160	454
Msa0853810	AT2G30020.1	61.443	402	125	7	1	378	1	396	1.22e-157	449
Msa0853810	AT2G40180.1	60.952	315	109	6	76	378	77	389	7.40e-126	368
Msa0853810	AT1G67820.1	46.729	321	143	6	37	332	13	330	2.62e-85	266
Msa0853810	AT1G67820.2	47.284	313	128	7	34	332	5	294	5.54e-85	264
Msa0853810	AT4G08260.1	52.869	244	82	4	136	378	1	212	4.06e-78	239
Msa0853810	AT3G27140.1	49.378	241	69	3	136	375	1	189	1.62e-65	208
Msa0853810	AT2G05050.1	44.672	244	83	4	136	378	1	193	3.51e-58	188
Msa0853810	AT4G31750.1	40.392	255	139	4	124	374	34	279	1.65e-55	185
Msa0853810	AT4G31750.3	40.392	255	139	4	124	374	34	279	1.65e-55	185
Msa0853810	AT4G31750.2	40.392	255	139	4	124	374	34	279	1.67e-55	184
Msa0853810	AT5G10740.1	40.000	255	140	4	124	374	34	279	5.02e-55	185
Msa0853810	AT5G10740.2	40.000	255	140	4	124	374	34	279	5.02e-55	185
Msa0853810	AT5G53140.1	39.608	255	140	6	127	376	104	349	6.71e-55	186
Msa0853810	AT5G53140.2	39.608	255	140	6	127	376	104	349	6.71e-55	186
Msa0853810	AT5G24940.1	39.216	255	142	4	124	374	34	279	2.29e-54	186
Msa0853810	AT1G43900.1	38.996	259	138	7	123	375	125	369	1.20e-52	179
Msa0853810	AT4G28400.3	36.965	257	146	7	124	374	14	260	2.63e-44	154
Msa0853810	AT3G15260.2	41.633	245	128	7	136	375	55	289	3.36e-44	154
Msa0853810	AT3G15260.1	41.633	245	128	7	136	375	55	289	3.36e-44	154
Msa0853810	AT4G28400.1	36.965	257	146	7	124	374	36	282	3.48e-44	154
Msa0853810	AT1G78200.5	37.500	248	137	7	136	375	1	238	7.04e-43	149
Msa0853810	AT1G78200.4	37.500	248	137	7	136	375	1	238	7.04e-43	149
Msa0853810	AT1G78200.1	36.364	264	149	8	121	375	30	283	1.52e-42	150
Msa0853810	AT1G78200.3	36.364	264	149	8	121	375	30	283	1.52e-42	150
Msa0853810	AT1G78200.2	36.364	264	149	8	121	375	30	283	1.52e-42	150
Msa0853810	AT2G20630.1	36.327	245	141	6	136	375	45	279	3.28e-42	149
Msa0853810	AT2G20630.2	36.929	241	137	6	136	371	45	275	3.87e-41	147
Msa0853810	AT1G34750.2	38.224	259	142	9	123	375	36	282	6.13e-41	146
Msa0853810	AT1G34750.1	38.224	259	142	9	123	375	36	282	6.13e-41	146
Msa0853810	AT1G34750.3	38.224	259	142	9	123	375	36	282	6.13e-41	146
Msa0853810	AT5G51760.2	34.528	307	145	8	124	376	79	383	2.09e-40	147
Msa0853810	AT5G51760.1	34.528	307	145	8	124	376	109	413	3.02e-40	147
Msa0853810	AT2G29380.1	36.934	287	143	10	123	375	79	361	4.43e-40	145
Msa0853810	AT2G25620.1	32.542	295	153	7	105	375	85	357	5.22e-40	146
Msa0853810	AT2G25620.2	32.542	295	153	7	105	375	85	357	5.22e-40	146
Msa0853810	AT2G33700.1	34.866	261	145	6	129	372	90	342	9.92e-40	145
Msa0853810	AT5G57050.2	33.333	306	144	8	124	375	73	372	3.64e-39	144
Msa0853810	AT5G57050.1	33.987	306	142	9	124	375	113	412	3.96e-39	144
Msa0853810	AT4G26080.1	32.667	300	149	8	123	375	130	423	7.84e-39	144
Msa0853810	AT1G22280.3	34.601	263	152	10	124	375	34	287	1.32e-38	140
Msa0853810	AT1G22280.1	34.749	259	151	10	124	375	34	281	2.03e-37	136
Msa0853810	AT1G72770.4	34.962	266	128	6	154	375	238	502	3.60e-37	140
Msa0853810	AT1G72770.1	34.962	266	128	6	154	375	238	502	3.60e-37	140
Msa0853810	AT1G72770.3	34.962	266	128	6	154	375	238	502	3.60e-37	140
Msa0853810	AT1G17550.1	35.206	267	127	7	154	375	237	502	4.10e-37	140
Msa0853810	AT1G17550.2	35.206	267	127	7	154	375	237	502	4.10e-37	140
Msa0853810	AT2G40860.1	33.077	260	149	5	131	375	400	649	5.51e-37	142
Msa0853810	AT2G40860.4	33.077	260	149	5	131	375	302	551	6.62e-37	140
Msa0853810	AT3G51470.1	32.184	261	151	8	127	372	76	325	1.23e-34	131
Msa0853810	AT3G51470.2	31.801	261	152	7	127	372	32	281	1.24e-34	130
Msa0853810	AT1G48040.1	34.211	266	143	7	133	372	88	347	1.85e-34	131
Msa0853810	AT4G28400.2	38.095	210	119	7	124	327	36	240	2.91e-34	127
Msa0853810	AT2G34740.1	34.274	248	148	8	136	378	101	338	8.85e-34	128
Msa0853810	AT3G11410.1	36.481	233	120	4	131	336	112	343	1.31e-33	129
Msa0853810	AT2G40860.2	32.927	246	140	5	131	361	400	635	3.80e-33	130
Msa0853810	AT1G07430.1	35.169	236	129	5	124	336	121	355	4.91e-33	128
Msa0853810	AT5G59220.1	35.102	245	134	4	124	346	112	353	7.73e-32	124
Msa0853810	AT1G34750.4	39.151	212	116	9	123	328	36	240	1.83e-29	114
Msa0853810	AT2G34740.2	37.438	203	111	8	136	330	115	309	3.82e-29	115
Msa0853810	AT2G34740.3	37.000	200	116	7	136	330	97	291	4.04e-29	115
Msa0853810	AT3G62260.3	31.224	237	141	5	153	372	26	257	4.37e-29	114
Msa0853810	AT3G17250.1	28.520	277	161	8	127	372	121	391	4.41e-29	117
Msa0853810	AT3G62260.1	31.224	237	141	5	153	372	115	346	6.90e-29	116
Msa0853810	AT3G62260.2	31.224	237	141	5	153	372	116	347	7.66e-29	115
Msa0853810	AT4G31860.1	28.213	319	152	10	124	376	24	331	2.60e-28	114
Msa0853810	AT4G31860.3	30.182	275	122	8	124	337	24	289	3.02e-28	112
Msa0853810	AT5G02760.1	31.674	221	111	6	154	335	72	291	3.55e-28	114
Msa0853810	AT3G55050.1	34.375	224	103	7	154	335	84	305	1.57e-27	112
Msa0853810	AT3G55050.2	34.375	224	103	7	154	335	84	305	1.57e-27	112
Msa0853810	AT2G25070.1	30.769	273	123	7	124	337	24	289	4.25e-27	110
Msa0853810	AT2G25070.2	30.769	273	123	7	124	337	24	289	4.25e-27	110
Msa0853810	AT4G33920.1	30.000	280	135	9	154	374	61	338	8.89e-27	110
Msa0853810	AT3G12620.2	32.743	226	102	6	154	334	83	303	9.14e-27	110
Msa0853810	AT3G12620.1	32.743	226	102	6	154	334	83	303	9.14e-27	110
Msa0853810	AT1G18030.1	31.780	236	131	8	130	338	81	313	3.62e-26	108
Msa0853810	AT5G06750.3	32.328	232	108	7	150	335	78	306	6.29e-26	108
Msa0853810	AT5G06750.1	32.328	232	108	7	150	335	78	306	6.29e-26	108
Msa0853810	AT1G18030.2	32.883	222	119	8	130	324	81	299	7.27e-26	106
Msa0853810	AT4G38520.2	33.632	223	108	8	154	336	81	303	3.73e-25	105
Msa0853810	AT4G38520.1	33.632	223	108	8	154	336	81	303	3.73e-25	105
Msa0853810	AT4G31860.2	30.268	261	112	8	124	323	24	275	4.00e-25	103
Msa0853810	AT3G51370.1	30.357	224	114	6	154	336	79	301	2.17e-24	103
Msa0853810	AT3G51370.3	30.357	224	114	6	154	336	79	301	2.17e-24	103
Msa0853810	AT5G66080.1	31.839	223	112	6	154	336	82	304	1.16e-23	101
Msa0853810	AT2G40860.3	32.338	201	116	4	131	316	400	595	1.41e-23	102
Msa0853810	AT4G33920.2	30.579	242	108	8	192	374	15	255	5.16e-23	98.2
Msa0853810	AT4G33920.3	32.227	211	93	6	213	374	16	225	2.62e-22	95.5
Msa0853810	AT1G09160.2	29.289	239	146	9	152	374	66	297	1.09e-21	96.3
Msa0853810	AT1G09160.1	29.289	239	146	9	152	374	66	297	1.09e-21	96.3
Msa0853810	AT1G47380.1	29.388	245	146	10	148	374	58	293	3.67e-21	94.7
Msa0853810	AT4G27800.1	28.179	291	155	10	130	374	66	348	5.74e-21	94.0
Msa0853810	AT3G06270.1	25.753	299	167	11	124	375	53	343	7.07e-21	93.2
Msa0853810	AT5G06750.2	32.461	191	85	5	191	337	36	226	3.23e-20	90.5
Msa0853810	AT3G17090.2	28.251	223	120	7	154	336	84	306	5.21e-20	90.1
Msa0853810	AT3G17090.1	26.354	277	150	9	154	376	84	360	5.87e-20	90.9
Msa0853810	AT5G57050.3	33.831	201	93	7	124	290	113	307	7.95e-20	89.4
Msa0853810	AT3G51370.2	34.194	155	71	3	213	336	62	216	1.45e-19	88.6
Msa0853810	AT1G68410.4	26.778	239	152	8	152	374	71	302	2.47e-19	89.4
Msa0853810	AT1G68410.3	26.778	239	152	8	152	374	71	302	2.47e-19	89.4
Msa0853810	AT1G68410.1	26.778	239	152	8	152	374	71	302	2.47e-19	89.4
Msa0853810	AT1G68410.2	26.778	239	152	8	152	374	71	302	2.47e-19	89.4
Msa0853810	AT5G27930.1	29.836	305	158	15	117	372	55	352	3.68e-19	88.6
Msa0853810	AT5G27930.2	29.836	305	158	15	117	372	55	352	3.68e-19	88.6
Msa0853810	AT5G66080.2	32.961	179	86	5	192	336	22	200	1.63e-18	85.1
Msa0853810	AT3G63320.1	26.198	313	136	10	156	375	71	381	3.17e-18	86.3
Msa0853810	AT3G63340.12	28.685	251	108	9	188	375	204	446	4.71e-18	86.3
Msa0853810	AT3G63340.11	28.685	251	108	9	188	375	204	446	8.03e-18	85.9
Msa0853810	AT3G63340.8	28.685	251	108	9	188	375	204	446	9.66e-18	85.5
Msa0853810	AT3G63340.6	28.685	251	108	9	188	375	204	446	9.81e-18	85.5
Msa0853810	AT3G63340.3	28.685	251	108	9	188	375	204	446	9.81e-18	85.5
Msa0853810	AT3G63340.10	28.685	251	108	9	188	375	204	446	9.81e-18	85.5
Msa0853810	AT3G63340.4	28.685	251	108	9	188	375	204	446	9.81e-18	85.5
Msa0853810	AT3G63340.5	28.685	251	108	9	188	375	204	446	9.93e-18	85.5
Msa0853810	AT3G63340.1	28.685	251	108	9	188	375	204	446	9.93e-18	85.5
Msa0853810	AT3G63340.7	28.685	251	108	9	188	375	204	446	1.00e-17	85.5
Msa0853810	AT3G63320.2	28.163	245	117	8	188	375	56	298	1.07e-17	84.0
Msa0853810	AT3G16800.2	30.000	250	133	10	125	336	64	309	1.80e-17	83.2
Msa0853810	AT3G16800.1	30.000	250	133	10	125	336	64	309	1.80e-17	83.2
Msa0853810	AT3G16800.3	30.000	250	133	10	125	336	64	309	1.80e-17	83.2
Msa0853810	AT5G01700.1	27.645	293	161	11	129	376	4	290	2.86e-17	82.4
Msa0853810	AT5G01700.2	27.609	297	164	11	125	376	49	339	8.72e-17	81.6
Msa0853810	AT1G72770.2	32.727	165	81	3	154	289	238	401	8.78e-17	81.6
Msa0853810	AT1G72770.5	32.727	165	81	3	154	289	238	401	8.78e-17	81.6
Msa0853810	AT3G16800.4	39.007	141	68	6	213	336	75	214	2.34e-16	78.6
Msa0853810	AT3G16800.6	39.007	141	68	6	213	336	75	214	2.34e-16	78.6
Msa0853810	AT5G59220.2	31.915	188	103	4	124	289	112	296	2.43e-16	79.3
Msa0853810	AT3G63340.2	34.899	149	73	6	243	375	339	479	3.26e-15	77.8
Msa0853810	AT3G05640.2	27.491	291	161	14	125	372	64	347	5.94e-15	75.9
Msa0853810	AT3G05640.1	27.491	291	161	14	125	372	64	347	5.94e-15	75.9
Msa0853810	AT3G05640.3	27.491	291	161	14	125	372	64	347	5.94e-15	75.9
Msa0853810	AT1G22280.2	33.553	152	90	8	124	269	34	180	1.03e-13	69.7
Msa0853810	AT3G16560.1	24.281	313	148	10	149	374	170	480	1.65e-13	72.0
Msa0853810	AT3G16560.4	24.281	313	148	10	149	374	170	480	1.65e-13	72.0
Msa0853810	AT3G16560.2	24.281	313	148	10	149	374	170	480	1.65e-13	72.0
Msa0853810	AT3G16560.3	25.746	268	128	8	149	347	170	435	2.46e-13	71.6
Msa0853810	AT5G36250.1	23.793	290	152	9	113	335	57	344	7.47e-12	67.0
Msa0853810	AT5G19280.2	29.412	238	132	10	131	338	318	549	2.43e-11	65.5
Msa0853810	AT1G79630.6	35.252	139	73	5	213	335	112	249	4.14e-11	64.3
Msa0853810	AT1G79630.3	35.252	139	73	5	213	335	112	249	4.14e-11	64.3
Msa0853810	AT1G79630.4	35.252	139	73	5	213	335	112	249	4.14e-11	64.3
Msa0853810	AT1G79630.5	35.252	139	73	5	213	335	112	249	4.14e-11	64.3
Msa0853810	AT1G79630.2	35.252	139	73	5	213	335	152	289	4.39e-11	64.7
Msa0853810	AT1G79630.7	35.252	139	73	5	213	335	152	289	4.39e-11	64.7
Msa0853810	AT1G79630.8	35.507	138	72	5	213	334	218	354	6.96e-11	63.9
Msa0853810	AT1G79630.1	35.507	138	72	5	213	334	222	358	7.39e-11	63.9

Find 97 sgRNAs with CRISPR-Local

Find 167 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTAAAATGATGACATTTAT+TGG	0.132356	5_4:+45805650	Msa0853810:three_prime_UTR
TATAGATTATCTAATTATTT+TGG	0.174941	5_4:+45805769	Msa0853810:three_prime_UTR
TATTAGCTTCAGATGGATTA+TGG	0.192944	5_4:+45805135	Msa0853810:CDS
TTTACGTCTAACAAAGATTC+TGG	0.196863	5_4:+45803629	Msa0853810:CDS
TCTTCGTGGTGAAAACAATT+TGG	0.251614	5_4:+45803850	Msa0853810:CDS
GAGAGGGAGGAGGGAGTATA+TGG	0.257999	5_4:+45803802	Msa0853810:CDS
GTCTGTTTCAAGAGGCTCTT+TGG	0.279836	5_4:+45805489	Msa0853810:CDS
CTAGTAAACAAATGGCTAAA+TGG	0.283175	5_4:-45805716	None:intergenic
AATTGAAACACTATGTTTAG+AGG	0.303735	5_4:+45805536	Msa0853810:CDS
GACGGAGCAAGACATGTTTA+AGG	0.316038	5_4:-45803408	None:intergenic
TTGATTTATGTCGCGGTGTT+TGG	0.326760	5_4:+45804994	Msa0853810:CDS
ATCATTCCAGGTTAGTAATC+AGG	0.327138	5_4:+45805384	Msa0853810:intron
AAATAATTTAACGTTGGAAT+TGG	0.339098	5_4:-45803337	None:intergenic
TGCCGCAAATTCAGCGGCTT+TGG	0.344353	5_4:-45804569	None:intergenic
GTTGTGTAACAGCATTCATT+AGG	0.357922	5_4:+45804722	Msa0853810:CDS
AATATTAACAAGTCATGTTC+AGG	0.369231	5_4:-45805116	None:intergenic
ATTAGCTTCAGATGGATTAT+GGG	0.376455	5_4:+45805136	Msa0853810:CDS
CACTATGTTTAGAGGTTCAT+TGG	0.381019	5_4:+45805544	Msa0853810:exon
GTTGTTGTTCACGATGATTA+AGG	0.382149	5_4:-45803380	None:intergenic
TTCGGTAATCGAAGACAAAA+AGG	0.384570	5_4:-45803593	None:intergenic
TAACAACCAACAACCGTTGA+TGG	0.393883	5_4:+45805444	Msa0853810:CDS
CGCGGTGTTTGGAGGATTCA+AGG	0.409122	5_4:+45805005	Msa0853810:CDS
ATTCTAATAACTTTAGTCTC+AGG	0.420683	5_4:-45805089	None:intergenic
GTTGTTGAGGCGGAGGGAGA+TGG	0.425322	5_4:+45803761	Msa0853810:CDS
AGGTGAAAACACCGGCGAAT+TGG	0.425904	5_4:-45803438	None:intergenic
TGCCAAAGCCGCTGAATTTG+CGG	0.431289	5_4:+45804567	Msa0853810:CDS
ATTTATGTCGCGGTGTTTGG+AGG	0.459287	5_4:+45804997	Msa0853810:CDS
TTACGTCTAACAAAGATTCT+GGG	0.460686	5_4:+45803630	Msa0853810:CDS
ATGGAAGATCGTTATACAGC+TGG	0.461700	5_4:+45803821	Msa0853810:CDS
GTCGTTGTTGTTGTTGAAGA+TGG	0.465895	5_4:-45803521	None:intergenic
TAGGCTAATCTCTAATCATC+AGG	0.469978	5_4:-45805590	None:intergenic
TAAATATTCTAGTAAACAAA+TGG	0.472837	5_4:-45805724	None:intergenic
TTTATTGTAAGAGAGGGAGG+AGG	0.476578	5_4:+45803792	Msa0853810:CDS
CTGTTTATTGTAAGAGAGGG+AGG	0.478469	5_4:+45803789	Msa0853810:CDS
TTGTTGAGGCGGAGGGAGAT+GGG	0.484067	5_4:+45803762	Msa0853810:CDS
ACCTTCAAGGGAAGATGAAA+AGG	0.484633	5_4:+45804834	Msa0853810:CDS
TTGCAGAAAAGAGATGAAGA+AGG	0.490349	5_4:-45803458	None:intergenic
GAGGGATGTTGTTGAGGCGG+AGG	0.493467	5_4:+45803754	Msa0853810:CDS
TTATTGTAAGAGAGGGAGGA+GGG	0.495221	5_4:+45803793	Msa0853810:CDS
TTCAGATGGATTATGGGATA+AGG	0.496992	5_4:+45805142	Msa0853810:CDS
CTTGCTGTATCAAGAGGAAT+CGG	0.497083	5_4:+45805032	Msa0853810:CDS
TCACCCATTGTTTCAAGTGT+CGG	0.498005	5_4:-45805058	None:intergenic
ATATATATACAGAAAAGAAT+AGG	0.498035	5_4:-45805609	None:intergenic
ATCTGATCACCGACCTTCAA+GGG	0.504972	5_4:+45804822	Msa0853810:CDS
CATCTGATCACCGACCTTCA+AGG	0.507130	5_4:+45804821	Msa0853810:CDS
ACAGCTGGGGTTAATCTTCG+TGG	0.510384	5_4:+45803836	Msa0853810:CDS
CGACACCGTCTGCGGTGGCG+AGG	0.516352	5_4:+45803735	Msa0853810:CDS
TACAGGCCATCAACGGTTGT+TGG	0.517697	5_4:-45805450	None:intergenic
ATTCTGTTTATTGTAAGAGA+GGG	0.518939	5_4:+45803786	Msa0853810:CDS
TTGTTAATATTAGCTTCAGA+TGG	0.519141	5_4:+45805128	Msa0853810:CDS
CAGCGGCTTTGGCACCTCCA+TGG	0.527083	5_4:-45804558	None:intergenic
TATTCTGTTTATTGTAAGAG+AGG	0.528687	5_4:+45803785	Msa0853810:CDS
GTGCTGTTATTAGTAGAGGA+GGG	0.529836	5_4:+45804782	Msa0853810:CDS
GCACAATTGTCTGTTTCAAG+AGG	0.531606	5_4:+45805481	Msa0853810:CDS
TTTCATCTTCCCTTGAAGGT+CGG	0.533441	5_4:-45804831	None:intergenic
AGACCGACACTTGAAACAAT+GGG	0.534360	5_4:+45805055	Msa0853810:CDS
AGGGATGTTGTTGAGGCGGA+GGG	0.535503	5_4:+45803755	Msa0853810:CDS
TCGATTACCGAAACTACCCT+TGG	0.539502	5_4:+45803604	Msa0853810:CDS
CAATTTGATTATCATGACAC+TGG	0.543628	5_4:-45805518	None:intergenic
CGTGCTGTTATTAGTAGAGG+AGG	0.544244	5_4:+45804781	Msa0853810:CDS
TGGAAGATCGTTATACAGCT+GGG	0.545761	5_4:+45803822	Msa0853810:CDS
TTTGGCGTATTTGATGGCCA+TGG	0.545794	5_4:+45804541	Msa0853810:CDS
GGTGAAGAAGGTGAAGAACA+AGG	0.546327	5_4:-45803572	None:intergenic
TGAACTCAGAATCGGTATTG+AGG	0.547989	5_4:-45804672	None:intergenic
TGCCGTGCTGTTATTAGTAG+AGG	0.550511	5_4:+45804778	Msa0853810:CDS
TGCTGTTATTAGTAGAGGAG+GGG	0.551553	5_4:+45804783	Msa0853810:CDS
AGAAACAGGTATATTAAGCC+TGG	0.552089	5_4:-45803690	None:intergenic
GACACCGTCTGCGGTGGCGA+GGG	0.554379	5_4:+45803736	Msa0853810:CDS
CGTCGCGGTTTCCAATTCGC+CGG	0.555330	5_4:+45803427	Msa0853810:CDS
ACATCCCTCGCCACCGCAGA+CGG	0.561418	5_4:-45803740	None:intergenic
GTAACAGCATTCATTAGGAA+TGG	0.564177	5_4:+45804727	Msa0853810:CDS
AAACATGTCTTGCTCCGTCG+CGG	0.570392	5_4:+45803412	Msa0853810:exon
GCCACCGCAGACGGTGTCGC+CGG	0.573609	5_4:-45803731	None:intergenic
GAGACCGACACTTGAAACAA+TGG	0.575527	5_4:+45805054	Msa0853810:CDS
TGAGTCAAATAATTTAACGT+TGG	0.579202	5_4:-45803343	None:intergenic
GGATCTCTTGCTGTATCAAG+AGG	0.589287	5_4:+45805026	Msa0853810:CDS
TGAAGAGGAAAAGACCTACC+AGG	0.589521	5_4:+45803672	Msa0853810:CDS
ACAGGTATATTAAGCCTGGT+AGG	0.595689	5_4:-45803686	None:intergenic
GGTAGAACAGAAGAAGATGA+TGG	0.602328	5_4:+45805565	Msa0853810:three_prime_UTR
GAAGGTGAAGAACAAGGAGA+AGG	0.604617	5_4:-45803566	None:intergenic
GAGCGACGAAGATGATGTTG+AGG	0.609121	5_4:+45804630	Msa0853810:CDS
GGCGAGGGATGTTGTTGAGG+CGG	0.612440	5_4:+45803751	Msa0853810:CDS
CGACGAAGATGATGTTGAGG+AGG	0.613126	5_4:+45804633	Msa0853810:CDS
AACTTAGTTGTGTCTAACGC+TGG	0.615689	5_4:+45804751	Msa0853810:CDS
TCCGGCGACACCGTCTGCGG+TGG	0.616313	5_4:+45803730	Msa0853810:CDS
GTTATTTGCCGCAAATTCAG+CGG	0.620742	5_4:-45804575	None:intergenic
TGTTCCGGCGACACCGTCTG+CGG	0.623253	5_4:+45803727	Msa0853810:CDS
GGTGGCGAGGGATGTTGTTG+AGG	0.629842	5_4:+45803748	Msa0853810:CDS
TAGTAGAGGAGGGGTTGCTG+AGG	0.630412	5_4:+45804792	Msa0853810:CDS
CGGCGAATTGGAAACCGCGA+CGG	0.634997	5_4:-45803426	None:intergenic
AAAGGACAGAATTGAGACCC+TGG	0.643034	5_4:+45804852	Msa0853810:CDS
CTCCTCTACTAATAACAGCA+CGG	0.646708	5_4:-45804780	None:intergenic
GGTTATGTTGATTTATGTCG+CGG	0.653499	5_4:+45804987	Msa0853810:CDS
GATGAAGAAGGTGAAAACAC+CGG	0.659578	5_4:-45803446	None:intergenic
GGAAGATCGTTATACAGCTG+GGG	0.671830	5_4:+45803823	Msa0853810:CDS
GTTGAGGAGGCAGTGAAGCG+CGG	0.685913	5_4:+45804646	Msa0853810:CDS
GGCGTATTTGATGGCCATGG+AGG	0.699437	5_4:+45804544	Msa0853810:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTCAATATTTGTTATTTTTT+TGG	+	chr5_4:45804030-45804049	Msa0853810:intron	10.0%
!!!	TATAGATTATCTAATTATTT+TGG	+	chr5_4:45805769-45805788	Msa0853810:three_prime_UTR	10.0%
!!	ATAGAATATATAATATTGAG+TGG	+	chr5_4:45803904-45803923	Msa0853810:intron	15.0%
!!	ATATATATACAGAAAAGAAT+AGG	-	chr5_4:45805612-45805631	None:intergenic	15.0%
!!!	TTTAAAATGATGACATTTAT+TGG	+	chr5_4:45805650-45805669	Msa0853810:three_prime_UTR	15.0%
!!	TAAATATTCTAGTAAACAAA+TGG	-	chr5_4:45805727-45805746	None:intergenic	15.0%
!!	AAATAATTTAACGTTGGAAT+TGG	-	chr5_4:45803340-45803359	None:intergenic	20.0%
!!	AATATATAATATTGAGTGGT+TGG	+	chr5_4:45803908-45803927	Msa0853810:intron	20.0%
!!	TGATTTACTCAAATTATTAG+CGG	-	chr5_4:45804165-45804184	None:intergenic	20.0%
!!	CACAATTCAAATTTAACTAA+TGG	-	chr5_4:45804350-45804369	None:intergenic	20.0%
!!	TAACTTAGAAAAAAACATCT+TGG	+	chr5_4:45804594-45804613	Msa0853810:CDS	20.0%
!	TGAGTCAAATAATTTAACGT+TGG	-	chr5_4:45803346-45803365	None:intergenic	25.0%
!	TATTCTGTTTATTGTAAGAG+AGG	+	chr5_4:45803785-45803804	Msa0853810:CDS	25.0%
!	ATTCTGTTTATTGTAAGAGA+GGG	+	chr5_4:45803786-45803805	Msa0853810:CDS	25.0%
!!	TTGATATGCTTTTGTCAATT+GGG	+	chr5_4:45803939-45803958	Msa0853810:intron	25.0%
!	ACTTGATTTCTTAATTGATC+TGG	+	chr5_4:45803979-45803998	Msa0853810:intron	25.0%
!!!	GTTATTTTTTTGGTCTGATT+TGG	+	chr5_4:45804040-45804059	Msa0853810:intron	25.0%
!!!	AATTTTTAAGCTATGTAGCT+CGG	+	chr5_4:45804111-45804130	Msa0853810:intron	25.0%
!	TTCAGTGTAATTATATGTGT+CGG	+	chr5_4:45804190-45804209	Msa0853810:intron	25.0%
!	GTAGATAGTTGAAACAAATT+AGG	+	chr5_4:45804369-45804388	Msa0853810:intron	25.0%
!	TATAAGATGTGATTGTGTAA+AGG	+	chr5_4:45804476-45804495	Msa0853810:intron	25.0%
!!!	GTTTATTTTGTGATAATTGC+AGG	+	chr5_4:45804513-45804532	Msa0853810:intron	25.0%
!!!	TTTTTTCATGAACTCAGAAT+CGG	-	chr5_4:45804683-45804702	None:intergenic	25.0%
!	TTCATGAAAAAAGATCTACA+TGG	+	chr5_4:45804691-45804710	Msa0853810:CDS	25.0%
!	ATGGTAAAGAAAATTTACCA+GGG	-	chr5_4:45804872-45804891	None:intergenic	25.0%
!	AATGGTAAAGAAAATTTACC+AGG	-	chr5_4:45804873-45804892	None:intergenic	25.0%
!	ATTCTAATAACTTTAGTCTC+AGG	-	chr5_4:45805092-45805111	None:intergenic	25.0%
!	AATATTAACAAGTCATGTTC+AGG	-	chr5_4:45805119-45805138	None:intergenic	25.0%
!!	TTGTTAATATTAGCTTCAGA+TGG	+	chr5_4:45805128-45805147	Msa0853810:CDS	25.0%
!	GATTAACCTATATGTGTATT+CGG	+	chr5_4:45805187-45805206	Msa0853810:intron	25.0%
!	GTTAATCATTCGATATCAAA+AGG	-	chr5_4:45805349-45805368	None:intergenic	25.0%
!	GAATGATTAAGAAACTTGAT+CGG	-	chr5_4:45805371-45805390	None:intergenic	25.0%
!	AATTGAAACACTATGTTTAG+AGG	+	chr5_4:45805536-45805555	Msa0853810:CDS	25.0%
	TTGTTAGACGTAAAAACCAA+GGG	-	chr5_4:45803623-45803642	None:intergenic	30.0%
	TTTGTTAGACGTAAAAACCA+AGG	-	chr5_4:45803624-45803643	None:intergenic	30.0%
	TTTACGTCTAACAAAGATTC+TGG	+	chr5_4:45803629-45803648	Msa0853810:CDS	30.0%
	TTACGTCTAACAAAGATTCT+GGG	+	chr5_4:45803630-45803649	Msa0853810:CDS	30.0%
!	GTTGATATGCTTTTGTCAAT+TGG	+	chr5_4:45803938-45803957	Msa0853810:intron	30.0%
!!	CTTAATTGATCTGGTCTTAT+TGG	+	chr5_4:45803988-45804007	Msa0853810:intron	30.0%
!	ATAGATTTTAAGCTGCTACT+AGG	+	chr5_4:45804275-45804294	Msa0853810:intron	30.0%
!!	TGTTGTTGTTGTTGATGATT+TGG	+	chr5_4:45804448-45804467	Msa0853810:intron	30.0%
!!!	TGATAATTGCAGGCTTTTTT+TGG	+	chr5_4:45804523-45804542	Msa0853810:intron	30.0%
	ATGAAAAAAGATCTACATGG+TGG	+	chr5_4:45804694-45804713	Msa0853810:CDS	30.0%
	AAGAGAACTCAATACACAAA+TGG	-	chr5_4:45804891-45804910	None:intergenic	30.0%
!	TGAAACCTTGTATTTGAGTT+TGG	+	chr5_4:45804927-45804946	Msa0853810:intron	30.0%
	AAGAACCAAACTCAAATACA+AGG	-	chr5_4:45804935-45804954	None:intergenic	30.0%
!!	TATTAGCTTCAGATGGATTA+TGG	+	chr5_4:45805135-45805154	Msa0853810:CDS	30.0%
!!	ATTAGCTTCAGATGGATTAT+GGG	+	chr5_4:45805136-45805155	Msa0853810:CDS	30.0%
	TCAAGTTTCTTAATCATTCC+AGG	+	chr5_4:45805372-45805391	Msa0853810:intron	30.0%
	CAATTTGATTATCATGACAC+TGG	-	chr5_4:45805521-45805540	None:intergenic	30.0%
	CTAGTAAACAAATGGCTAAA+TGG	-	chr5_4:45805719-45805738	None:intergenic	30.0%
!	GTTGTTGTTCACGATGATTA+AGG	-	chr5_4:45803383-45803402	None:intergenic	35.0%
	TTGCAGAAAAGAGATGAAGA+AGG	-	chr5_4:45803461-45803480	None:intergenic	35.0%
	TTCGGTAATCGAAGACAAAA+AGG	-	chr5_4:45803596-45803615	None:intergenic	35.0%
	GTAAAAACCAAGGGTAGTTT+CGG	-	chr5_4:45803614-45803633	None:intergenic	35.0%
!!!	AGAATGATGCTGTTTTGAAG+AGG	+	chr5_4:45803657-45803676	Msa0853810:CDS	35.0%
	AGAAACAGGTATATTAAGCC+TGG	-	chr5_4:45803693-45803712	None:intergenic	35.0%
!	CAAAAAGCATGTTCAGAAAC+AGG	-	chr5_4:45803707-45803726	None:intergenic	35.0%
!!	TGAACATGCTTTTTGTGTTC+CGG	+	chr5_4:45803712-45803731	Msa0853810:CDS	35.0%
	TCTTCGTGGTGAAAACAATT+TGG	+	chr5_4:45803850-45803869	Msa0853810:CDS	35.0%
	ACTCAAATTATTAGCGGTGT+CGG	-	chr5_4:45804159-45804178	None:intergenic	35.0%
!	TGTAAAGGTCTAACTTGTAC+AGG	+	chr5_4:45804491-45804510	Msa0853810:intron	35.0%
!!!	GCTTTTTTTGGCGTATTTGA+TGG	+	chr5_4:45804535-45804554	Msa0853810:CDS	35.0%
	GTTGTGTAACAGCATTCATT+AGG	+	chr5_4:45804722-45804741	Msa0853810:CDS	35.0%
	GTAACAGCATTCATTAGGAA+TGG	+	chr5_4:45804727-45804746	Msa0853810:CDS	35.0%
	TGCATTGAAATTTGTCTTGC+AGG	+	chr5_4:45804962-45804981	Msa0853810:intron	35.0%
	GCATTGAAATTTGTCTTGCA+GGG	+	chr5_4:45804963-45804982	Msa0853810:intron	35.0%
!!	GGTTATGTTGATTTATGTCG+CGG	+	chr5_4:45804987-45805006	Msa0853810:CDS	35.0%
!!	TTCAGATGGATTATGGGATA+AGG	+	chr5_4:45805142-45805161	Msa0853810:CDS	35.0%
	ACATGATTTGAGTGTGTGTT+TGG	-	chr5_4:45805270-45805289	None:intergenic	35.0%
!	GGAAAGTGTGTTTAGTTACT+CGG	-	chr5_4:45805328-45805347	None:intergenic	35.0%
	ATCATTCCAGGTTAGTAATC+AGG	+	chr5_4:45805384-45805403	Msa0853810:intron	35.0%
!	CAATTGTGCAAGCTTTTTAC+AGG	-	chr5_4:45805470-45805489	None:intergenic	35.0%
	CACTATGTTTAGAGGTTCAT+TGG	+	chr5_4:45805544-45805563	Msa0853810:exon	35.0%
	TAGGCTAATCTCTAATCATC+AGG	-	chr5_4:45805593-45805612	None:intergenic	35.0%
!	TGAATTTTTGTACCCGTAGA+TGG	+	chr5_4:45805673-45805692	Msa0853810:three_prime_UTR	35.0%
!	GAATTTTTGTACCCGTAGAT+GGG	+	chr5_4:45805674-45805693	Msa0853810:three_prime_UTR	35.0%
!	AATTTTTGTACCCGTAGATG+GGG	+	chr5_4:45805675-45805694	Msa0853810:three_prime_UTR	35.0%
	GATGAAGAAGGTGAAAACAC+CGG	-	chr5_4:45803449-45803468	None:intergenic	40.0%
!	GTCGTTGTTGTTGTTGAAGA+TGG	-	chr5_4:45803524-45803543	None:intergenic	40.0%
	CGAAGACAAAAAGGTGAAGA+AGG	-	chr5_4:45803587-45803606	None:intergenic	40.0%
	ACAGGTATATTAAGCCTGGT+AGG	-	chr5_4:45803689-45803708	None:intergenic	40.0%
	CTGTTTATTGTAAGAGAGGG+AGG	+	chr5_4:45803789-45803808	Msa0853810:CDS	40.0%
	TTTATTGTAAGAGAGGGAGG+AGG	+	chr5_4:45803792-45803811	Msa0853810:CDS	40.0%
	TTATTGTAAGAGAGGGAGGA+GGG	+	chr5_4:45803793-45803812	Msa0853810:CDS	40.0%
	ATGGAAGATCGTTATACAGC+TGG	+	chr5_4:45803821-45803840	Msa0853810:CDS	40.0%
	TGGAAGATCGTTATACAGCT+GGG	+	chr5_4:45803822-45803841	Msa0853810:CDS	40.0%
	TAAGCTATGTAGCTCGGATA+CGG	+	chr5_4:45804117-45804136	Msa0853810:intron	40.0%
	GTTATTTGCCGCAAATTCAG+CGG	-	chr5_4:45804578-45804597	None:intergenic	40.0%
	TGAACTCAGAATCGGTATTG+AGG	-	chr5_4:45804675-45804694	None:intergenic	40.0%
	AACTTAGTTGTGTCTAACGC+TGG	+	chr5_4:45804751-45804770	Msa0853810:CDS	40.0%
	CTCCTCTACTAATAACAGCA+CGG	-	chr5_4:45804783-45804802	None:intergenic	40.0%
!	GTGCTGTTATTAGTAGAGGA+GGG	+	chr5_4:45804782-45804801	Msa0853810:CDS	40.0%
	TGCTGTTATTAGTAGAGGAG+GGG	+	chr5_4:45804783-45804802	Msa0853810:CDS	40.0%
	TTTCATCTTCCCTTGAAGGT+CGG	-	chr5_4:45804834-45804853	None:intergenic	40.0%
	ACCTTCAAGGGAAGATGAAA+AGG	+	chr5_4:45804834-45804853	Msa0853810:CDS	40.0%
!	TCCTTTTCATCTTCCCTTGA+AGG	-	chr5_4:45804838-45804857	None:intergenic	40.0%
	TTGAAATTTGTCTTGCAGGG+TGG	+	chr5_4:45804966-45804985	Msa0853810:intron	40.0%
	TTGATTTATGTCGCGGTGTT+TGG	+	chr5_4:45804994-45805013	Msa0853810:CDS	40.0%
!	CTTGCTGTATCAAGAGGAAT+CGG	+	chr5_4:45805032-45805051	Msa0853810:CDS	40.0%
	AGACCGACACTTGAAACAAT+GGG	+	chr5_4:45805055-45805074	Msa0853810:CDS	40.0%
!	TCACCCATTGTTTCAAGTGT+CGG	-	chr5_4:45805061-45805080	None:intergenic	40.0%
	CAAACGCCGAATACACATAT+AGG	-	chr5_4:45805196-45805215	None:intergenic	40.0%
!	ATTGCTCGTCAATTTTGCGT+AGG	+	chr5_4:45805418-45805437	Msa0853810:CDS	40.0%
	TAACAACCAACAACCGTTGA+TGG	+	chr5_4:45805444-45805463	Msa0853810:CDS	40.0%
!	AGCTTTTTACAGGCCATCAA+CGG	-	chr5_4:45805460-45805479	None:intergenic	40.0%
	GCACAATTGTCTGTTTCAAG+AGG	+	chr5_4:45805481-45805500	Msa0853810:CDS	40.0%
	GGTAGAACAGAAGAAGATGA+TGG	+	chr5_4:45805565-45805584	Msa0853810:three_prime_UTR	40.0%
!	ATTTTTGTACCCGTAGATGG+GGG	+	chr5_4:45805676-45805695	Msa0853810:three_prime_UTR	40.0%
	GACGGAGCAAGACATGTTTA+AGG	-	chr5_4:45803411-45803430	None:intergenic	45.0%
	GAAGGTGAAGAACAAGGAGA+AGG	-	chr5_4:45803569-45803588	None:intergenic	45.0%
	GGTGAAGAAGGTGAAGAACA+AGG	-	chr5_4:45803575-45803594	None:intergenic	45.0%
	TCGATTACCGAAACTACCCT+TGG	+	chr5_4:45803604-45803623	Msa0853810:CDS	45.0%
	TGAAGAGGAAAAGACCTACC+AGG	+	chr5_4:45803672-45803691	Msa0853810:CDS	45.0%
	GGAAGATCGTTATACAGCTG+GGG	+	chr5_4:45803823-45803842	Msa0853810:CDS	45.0%
!!	TCTGATTTGGTAGCTGCACA+TGG	+	chr5_4:45804053-45804072	Msa0853810:intron	45.0%
!	TTTGGCGTATTTGATGGCCA+TGG	+	chr5_4:45804541-45804560	Msa0853810:CDS	45.0%
!	TGCCGTGCTGTTATTAGTAG+AGG	+	chr5_4:45804778-45804797	Msa0853810:CDS	45.0%
!	CGTGCTGTTATTAGTAGAGG+AGG	+	chr5_4:45804781-45804800	Msa0853810:CDS	45.0%
	ATCTGATCACCGACCTTCAA+GGG	+	chr5_4:45804822-45804841	Msa0853810:CDS	45.0%
	AAAGGACAGAATTGAGACCC+TGG	+	chr5_4:45804852-45804871	Msa0853810:CDS	45.0%
	ATTTATGTCGCGGTGTTTGG+AGG	+	chr5_4:45804997-45805016	Msa0853810:CDS	45.0%
!	GGATCTCTTGCTGTATCAAG+AGG	+	chr5_4:45805026-45805045	Msa0853810:CDS	45.0%
	GAGACCGACACTTGAAACAA+TGG	+	chr5_4:45805054-45805073	Msa0853810:CDS	45.0%
	CTGCTTCCTGATTACTAACC+TGG	-	chr5_4:45805393-45805412	None:intergenic	45.0%
	GTCTGTTTCAAGAGGCTCTT+TGG	+	chr5_4:45805489-45805508	Msa0853810:CDS	45.0%
	AATCTCTACTCCCCCATCTA+CGG	-	chr5_4:45805689-45805708	None:intergenic	45.0%
	AAACATGTCTTGCTCCGTCG+CGG	+	chr5_4:45803412-45803431	Msa0853810:exon	50.0%
	AGGTGAAAACACCGGCGAAT+TGG	-	chr5_4:45803441-45803460	None:intergenic	50.0%
	ACAGCTGGGGTTAATCTTCG+TGG	+	chr5_4:45803836-45803855	Msa0853810:CDS	50.0%
!!	ATATGTGTCGGTGTCGTGTC+CGG	+	chr5_4:45804202-45804221	Msa0853810:intron	50.0%
	GTTTAGGAGGATCCTGGTGT+CGG	-	chr5_4:45804236-45804255	None:intergenic	50.0%
	GACACCAGGATCCTCCTAAA+CGG	+	chr5_4:45804235-45804254	Msa0853810:intron	50.0%
	TGCCAAAGCCGCTGAATTTG+CGG	+	chr5_4:45804567-45804586	Msa0853810:CDS	50.0%
	GAGCGACGAAGATGATGTTG+AGG	+	chr5_4:45804630-45804649	Msa0853810:CDS	50.0%
	CGACGAAGATGATGTTGAGG+AGG	+	chr5_4:45804633-45804652	Msa0853810:CDS	50.0%
	CATCTGATCACCGACCTTCA+AGG	+	chr5_4:45804821-45804840	Msa0853810:CDS	50.0%
	TACAGGCCATCAACGGTTGT+TGG	-	chr5_4:45805453-45805472	None:intergenic	50.0%
	ATCTCTACTCCCCCATCTAC+GGG	-	chr5_4:45805688-45805707	None:intergenic	50.0%
	AGGGATGTTGTTGAGGCGGA+GGG	+	chr5_4:45803755-45803774	Msa0853810:CDS	55.0%
	TTGTTGAGGCGGAGGGAGAT+GGG	+	chr5_4:45803762-45803781	Msa0853810:CDS	55.0%
!	GAGAGGGAGGAGGGAGTATA+TGG	+	chr5_4:45803802-45803821	Msa0853810:CDS	55.0%
	ACCAGGATCCTCCTAAACGG+AGG	+	chr5_4:45804238-45804257	Msa0853810:intron	55.0%
	TCCTCCGTTTAGGAGGATCC+TGG	-	chr5_4:45804242-45804261	None:intergenic	55.0%
	CAGACACTCCTCCGTTTAGG+AGG	-	chr5_4:45804249-45804268	None:intergenic	55.0%
	GCACAGACACTCCTCCGTTT+AGG	-	chr5_4:45804252-45804271	None:intergenic	55.0%
!	GGCGTATTTGATGGCCATGG+AGG	+	chr5_4:45804544-45804563	Msa0853810:CDS	55.0%
	TGCCGCAAATTCAGCGGCTT+TGG	-	chr5_4:45804572-45804591	None:intergenic	55.0%
	TAGTAGAGGAGGGGTTGCTG+AGG	+	chr5_4:45804792-45804811	Msa0853810:CDS	55.0%
	CGCGGTGTTTGGAGGATTCA+AGG	+	chr5_4:45805005-45805024	Msa0853810:CDS	55.0%
	CGGCGAATTGGAAACCGCGA+CGG	-	chr5_4:45803429-45803448	None:intergenic	60.0%
	CGTCGCGGTTTCCAATTCGC+CGG	+	chr5_4:45803427-45803446	Msa0853810:CDS	60.0%
	GGTGGCGAGGGATGTTGTTG+AGG	+	chr5_4:45803748-45803767	Msa0853810:CDS	60.0%
	GGCGAGGGATGTTGTTGAGG+CGG	+	chr5_4:45803751-45803770	Msa0853810:CDS	60.0%
	GAGGGATGTTGTTGAGGCGG+AGG	+	chr5_4:45803754-45803773	Msa0853810:CDS	60.0%
	GTTGTTGAGGCGGAGGGAGA+TGG	+	chr5_4:45803761-45803780	Msa0853810:CDS	60.0%
	GCTCGGATACGGACACGACA+CGG	+	chr5_4:45804128-45804147	Msa0853810:intron	60.0%
	GTTGAGGAGGCAGTGAAGCG+CGG	+	chr5_4:45804646-45804665	Msa0853810:CDS	60.0%
	TGTTCCGGCGACACCGTCTG+CGG	+	chr5_4:45803727-45803746	Msa0853810:CDS	65.0%
	ACATCCCTCGCCACCGCAGA+CGG	-	chr5_4:45803743-45803762	None:intergenic	65.0%
!	CCTGGTGTCGGACACGACAC+CGG	-	chr5_4:45804224-45804243	None:intergenic	65.0%
!	CAGCGGCTTTGGCACCTCCA+TGG	-	chr5_4:45804561-45804580	None:intergenic	65.0%
	GACACCGTCTGCGGTGGCGA+GGG	+	chr5_4:45803736-45803755	Msa0853810:CDS	70.0%
!!	CCGGTGTCGTGTCCGACACC+AGG	+	chr5_4:45804221-45804240	Msa0853810:intron	70.0%
	TCCGGCGACACCGTCTGCGG+TGG	+	chr5_4:45803730-45803749	Msa0853810:CDS	75.0%
!!	GCCACCGCAGACGGTGTCGC+CGG	-	chr5_4:45803734-45803753	None:intergenic	75.0%
	CGACACCGTCTGCGGTGGCG+AGG	+	chr5_4:45803735-45803754	Msa0853810:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_4	gene	45803292	45805819	45803292	ID=Msa0853810;Name=Msa0853810
chr5_4	mRNA	45803292	45805819	45803292	ID=Msa0853810-mRNA-1;Parent=Msa0853810;Name=Msa0853810-mRNA-1;_AED=0.08;_eAED=0.08;_QI=124\|1\|1\|1\|1\|1\|4\|264\|378
chr5_4	exon	45803292	45803871	45803292	ID=Msa0853810-mRNA-1:exon:14465;Parent=Msa0853810-mRNA-1
chr5_4	exon	45804535	45804873	45804535	ID=Msa0853810-mRNA-1:exon:14466;Parent=Msa0853810-mRNA-1
chr5_4	exon	45804984	45805163	45804984	ID=Msa0853810-mRNA-1:exon:14467;Parent=Msa0853810-mRNA-1
chr5_4	exon	45805394	45805819	45805394	ID=Msa0853810-mRNA-1:exon:14468;Parent=Msa0853810-mRNA-1
chr5_4	five_prime_UTR	45803292	45803415	45803292	ID=Msa0853810-mRNA-1:five_prime_utr;Parent=Msa0853810-mRNA-1
chr5_4	CDS	45803416	45803871	45803416	ID=Msa0853810-mRNA-1:cds;Parent=Msa0853810-mRNA-1
chr5_4	CDS	45804535	45804873	45804535	ID=Msa0853810-mRNA-1:cds;Parent=Msa0853810-mRNA-1
chr5_4	CDS	45804984	45805163	45804984	ID=Msa0853810-mRNA-1:cds;Parent=Msa0853810-mRNA-1
chr5_4	CDS	45805394	45805555	45805394	ID=Msa0853810-mRNA-1:cds;Parent=Msa0853810-mRNA-1
chr5_4	three_prime_UTR	45805556	45805819	45805556	ID=Msa0853810-mRNA-1:three_prime_utr;Parent=Msa0853810-mRNA-1

Gene Sequence

>Msa0853810

ATGTCTTGCTCCGTCGCGGTTTCCAATTCGCCGGTGTTTTCACCTTCTTCATCTCTTTTCTGCAACAAATCTGAATCGTTAACGTTATCTCTTTCTCATCTCAAACCATCTTCAACAACAACAACGACGTCTTCATCGTCTTCTTCTTCGCCTTCTCCTTGTTCTTCACCTTCTTCACCTTTTTGTCTTCGATTACCGAAACTACCCTTGGTTTTTACGTCTAACAAAGATTCTGGGTCGCAGAATGATGCTGTTTTGAAGAGGAAAAGACCTACCAGGCTTAATATACCTGTTTCTGAACATGCTTTTTGTGTTCCGGCGACACCGTCTGCGGTGGCGAGGGATGTTGTTGAGGCGGAGGGAGATGGGTATTCTGTTTATTGTAAGAGAGGGAGGAGGGAGTATATGGAAGATCGTTATACAGCTGGGGTTAATCTTCGTGGTGAAAACAATTTGGCTTTTTTTGGCGTATTTGATGGCCATGGAGGTGCCAAAGCCGCTGAATTTGCGGCAAATAACTTAGAAAAAAACATCTTGGACGAAGTTATCATGAGCGACGAAGATGATGTTGAGGAGGCAGTGAAGCGCGGTTACCTCAATACCGATTCTGAGTTCATGAAAAAAGATCTACATGGTGGCTCTTGTTGTGTAACAGCATTCATTAGGAATGGTAACTTAGTTGTGTCTAACGCTGGTGATTGCCGTGCTGTTATTAGTAGAGGAGGGGTTGCTGAGGCACTAACATCTGATCACCGACCTTCAAGGGAAGATGAAAAGGACAGAATTGAGACCCTGGGTGGTTATGTTGATTTATGTCGCGGTGTTTGGAGGATTCAAGGATCTCTTGCTGTATCAAGAGGAATCGGAGACCGACACTTGAAACAATGGGTGACAGCAGAGCCTGAGACTAAAGTTATTAGAATTGAACCTGAACATGACTTGTTAATATTAGCTTCAGATGGATTATGGGATAAGGTTAGTAATCAGGAAGCAGTAGACATTGCTCGTCAATTTTGCGTAGGAAATAACAACCAACAACCGTTGATGGCCTGTAAAAAGCTTGCACAATTGTCTGTTTCAAGAGGCTCTTTGGATGATACCAGTGTCATGATAATCAAATTGAAACACTATGTTTAG

Protein sequence

>Msa0853810

MSCSVAVSNSPVFSPSSSLFCNKSESLTLSLSHLKPSSTTTTTSSSSSSSPSPCSSPSSPFCLRLPKLPLVFTSNKDSGSQNDAVLKRKRPTRLNIPVSEHAFCVPATPSAVARDVVEAEGDGYSVYCKRGRREYMEDRYTAGVNLRGENNLAFFGVFDGHGGAKAAEFAANNLEKNILDEVIMSDEDDVEEAVKRGYLNTDSEFMKKDLHGGSCCVTAFIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDEKDRIETLGGYVDLCRGVWRIQGSLAVSRGIGDRHLKQWVTAEPETKVIRIEPEHDLLILASDGLWDKVSNQEAVDIARQFCVGNNNQQPLMACKKLAQLSVSRGSLDDTSVMIIKLKHYV*