Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0470560 | XP_024635296.1 | 92.761 | 815 | 58 | 1 | 1 | 814 | 1 | 815 | 0.0 | 1540 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0470560 | sp|P90648|MHCKB_DICDI | 29.237 | 236 | 151 | 4 | 521 | 754 | 489 | 710 | 5.33e-22 | 105 |
Msa0470560 | sp|P90648|MHCKB_DICDI | 30.952 | 168 | 98 | 4 | 530 | 692 | 578 | 732 | 1.26e-12 | 75.5 |
Msa0470560 | sp|P90648|MHCKB_DICDI | 26.178 | 191 | 130 | 3 | 627 | 815 | 505 | 686 | 1.16e-11 | 72.4 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0470560 | A0A396IXU9 | 92.770 | 816 | 58 | 1 | 1 | 815 | 1 | 816 | 0.0 | 1521 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0077390 | Msa0470560 | 0.810716 | 1.003715e-50 | -8.615850e-47 |
Msa0096450 | Msa0470560 | 0.801929 | 7.140262e-49 | -8.615850e-47 |
Msa0170320 | Msa0470560 | 0.809978 | 1.448315e-50 | -8.615850e-47 |
Msa0373930 | Msa0470560 | 0.820873 | 5.449309e-53 | -8.615850e-47 |
Msa0380340 | Msa0470560 | 0.815580 | 8.593818e-52 | -8.615850e-47 |
Msa0423770 | Msa0470560 | 0.929691 | 4.827822e-93 | -8.615850e-47 |
Msa0431690 | Msa0470560 | 0.802468 | 5.531245e-49 | -8.615850e-47 |
Msa0449760 | Msa0470560 | 0.820054 | 8.398521e-53 | -8.615850e-47 |
Msa0470560 | Msa0498220 | 0.818606 | 1.795153e-52 | -8.615850e-47 |
Msa0470560 | Msa0528970 | 0.824067 | 9.866681e-54 | -8.615850e-47 |
Msa0470560 | Msa0540070 | 0.807001 | 6.254937e-50 | -8.615850e-47 |
Msa0470560 | Msa0543900 | 0.820446 | 6.830029e-53 | -8.615850e-47 |
Msa0470560 | Msa0553460 | 0.810935 | 8.999982e-51 | -8.615850e-47 |
Msa0470560 | Msa0564510 | 0.823535 | 1.314891e-53 | -8.615850e-47 |
Msa0470560 | Msa0584070 | 0.806071 | 9.826570e-50 | -8.615850e-47 |
Msa0470560 | Msa0599770 | 0.821201 | 4.579132e-53 | -8.615850e-47 |
Msa0470560 | Msa0599890 | 0.822574 | 2.203004e-53 | -8.615850e-47 |
Msa0470560 | Msa0607540 | 0.814551 | 1.454461e-51 | -8.615850e-47 |
Msa0470560 | Msa0640380 | 0.817278 | 3.582860e-52 | -8.615850e-47 |
Msa0470560 | Msa0647830 | 0.812407 | 4.305711e-51 | -8.615850e-47 |
Msa0470560 | Msa0678820 | 0.821645 | 3.616864e-53 | -8.615850e-47 |
Msa0470560 | Msa0767080 | 0.807796 | 4.243195e-50 | -8.615850e-47 |
Msa0470560 | Msa0806090 | 0.816766 | 4.668070e-52 | -8.615850e-47 |
Msa0470560 | Msa0828540 | 0.803048 | 4.199065e-49 | -8.615850e-47 |
Msa0470560 | Msa0876850 | -0.806866 | 6.681254e-50 | -8.615850e-47 |
Msa0470560 | Msa1068200 | -0.800348 | 1.503507e-48 | -8.615850e-47 |
Msa0470560 | Msa1075080 | -0.802790 | 4.746490e-49 | -8.615850e-47 |
Msa0470560 | Msa1228210 | 0.805282 | 1.439275e-49 | -8.615850e-47 |
Msa0470560 | Msa1271280 | 0.801695 | 7.974489e-49 | -8.615850e-47 |
Msa0470560 | Msa1271300 | 0.807906 | 4.020890e-50 | -8.615850e-47 |
Msa0470560 | Msa1327320 | 0.806825 | 6.815574e-50 | -8.615850e-47 |
Msa0470560 | Msa1357530 | 0.815321 | 9.815591e-52 | -8.615850e-47 |
Msa0470560 | Msa1393040 | 0.801095 | 1.058228e-48 | -8.615850e-47 |
Msa0470560 | Msa1459950 | 0.801491 | 8.779922e-49 | -8.615850e-47 |
Msa0470560 | Msa1464940 | 0.804152 | 2.477548e-49 | -8.615850e-47 |
Msa0295640 | Msa0470560 | -0.808513 | 2.985581e-50 | -8.615850e-47 |
Msa0331920 | Msa0470560 | 0.807739 | 4.363057e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0470560 | MtrunA17_Chr3g0125181 | 92.770 | 816 | 58 | 1 | 1 | 815 | 1 | 816 | 0.0 | 1521 |
Msa0470560 | MtrunA17_Chr8g0381281 | 28.571 | 161 | 108 | 3 | 533 | 689 | 211 | 368 | 1.59e-13 | 73.9 |
Msa0470560 | MtrunA17_Chr4g0020751 | 23.547 | 344 | 204 | 8 | 518 | 815 | 48 | 378 | 8.16e-13 | 71.2 |
Msa0470560 | MtrunA17_Chr4g0059031 | 28.022 | 182 | 106 | 7 | 530 | 695 | 56 | 228 | 2.94e-11 | 67.4 |
Msa0470560 | MtrunA17_Chr4g0059031 | 23.938 | 259 | 175 | 7 | 530 | 770 | 398 | 652 | 3.43e-11 | 67.0 |
Msa0470560 | MtrunA17_Chr8g0390861 | 25.263 | 285 | 185 | 9 | 496 | 770 | 878 | 1144 | 9.92e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0470560 | AT1G21651.1 | 43.780 | 836 | 425 | 14 | 1 | 818 | 1 | 809 | 0.0 | 648 |
Msa0470560 | AT1G21650.3 | 43.630 | 832 | 424 | 14 | 1 | 814 | 1 | 805 | 0.0 | 647 |
Msa0470560 | AT1G24530.1 | 24.880 | 209 | 102 | 3 | 533 | 735 | 194 | 353 | 3.57e-15 | 79.0 |
Msa0470560 | AT1G49450.1 | 25.899 | 278 | 165 | 10 | 535 | 776 | 135 | 407 | 8.24e-15 | 78.6 |
Msa0470560 | AT4G02730.1 | 24.601 | 313 | 194 | 11 | 526 | 815 | 35 | 328 | 1.51e-14 | 76.3 |
Msa0470560 | AT5G49200.1 | 23.746 | 299 | 179 | 8 | 523 | 775 | 120 | 415 | 3.55e-14 | 75.9 |
Msa0470560 | AT5G16750.1 | 25.000 | 260 | 171 | 9 | 530 | 770 | 397 | 651 | 4.85e-13 | 73.6 |
Msa0470560 | AT5G50120.1 | 30.222 | 225 | 129 | 11 | 533 | 734 | 164 | 383 | 8.72e-13 | 71.6 |
Msa0470560 | AT1G49040.1 | 23.488 | 281 | 195 | 8 | 496 | 770 | 864 | 1130 | 1.33e-12 | 72.4 |
Msa0470560 | AT1G47610.1 | 22.727 | 352 | 210 | 11 | 515 | 815 | 5 | 345 | 2.15e-12 | 70.1 |
Msa0470560 | AT3G18950.1 | 25.271 | 277 | 168 | 10 | 535 | 776 | 139 | 411 | 2.93e-12 | 70.5 |
Msa0470560 | AT2G26490.1 | 24.000 | 325 | 197 | 12 | 535 | 815 | 97 | 415 | 1.13e-11 | 68.6 |
Msa0470560 | AT3G51930.1 | 25.000 | 200 | 121 | 3 | 516 | 689 | 43 | 239 | 2.69e-11 | 67.0 |
Msa0470560 | AT1G24130.1 | 27.203 | 261 | 144 | 11 | 516 | 735 | 100 | 355 | 6.62e-11 | 65.9 |
Find 231 sgRNAs with CRISPR-Local
Find 571 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTAGGTTGTGTAGGGTTTA+TGG | 0.112985 | 3_3:+72660306 | Msa0470560:CDS |
AAGATTATGGATCAGGTTTC+TGG | 0.185139 | 3_3:+72660609 | Msa0470560:CDS |
ATACATTCCTTGACTGCTTT+TGG | 0.193440 | 3_3:+72664722 | Msa0470560:CDS |
CACCCTGTAGAGGCATAATT+TGG | 0.200463 | 3_3:-72667444 | None:intergenic |
TTTCGGCTAGTTATATTTCT+TGG | 0.223347 | 3_3:+72660889 | Msa0470560:CDS |
AGCTGTGATTGCTTTGAATT+TGG | 0.260975 | 3_3:+72660488 | Msa0470560:CDS |
GGTTTGGTTGCTGGCAGTTT+GGG | 0.267919 | 3_3:+72660513 | Msa0470560:CDS |
TGCTTTGAATTTGGAAGGTT+TGG | 0.270758 | 3_3:+72660497 | Msa0470560:CDS |
TACTGCTAGTAGGGATTTGC+TGG | 0.272897 | 3_3:+72665085 | Msa0470560:CDS |
CTATGAGTCTGCAGGGAAAA+TGG | 0.273135 | 3_3:+72665339 | Msa0470560:CDS |
GGAAAACTTTATATTGGATA+TGG | 0.275046 | 3_3:+72666452 | Msa0470560:CDS |
TGTTGGTGGTAGTCTGTATT+TGG | 0.279100 | 3_3:+72660344 | Msa0470560:CDS |
CACAACTTGGCAAGAATTAC+AGG | 0.280339 | 3_3:-72661122 | None:intergenic |
GGCACCATTATGCAATGTTT+TGG | 0.291144 | 3_3:-72665309 | None:intergenic |
TCTCATTTACACACGTTTAG+AGG | 0.306155 | 3_3:+72664536 | Msa0470560:CDS |
TCCGCACCTTGAAGAATATC+AGG | 0.311910 | 3_3:-72661215 | None:intergenic |
AGAACTCAAAATTGTCGTTT+AGG | 0.313712 | 3_3:+72659624 | Msa0470560:five_prime_UTR |
TTGTTAGCCAAACACCAATT+TGG | 0.314879 | 3_3:+72661050 | Msa0470560:CDS |
ATTGAATTGTAGGAATTATC+AGG | 0.322957 | 3_3:+72666350 | Msa0470560:intron |
GCCGAGAGAACACGGGTTGC+AGG | 0.323753 | 3_3:+72661172 | Msa0470560:CDS |
ATGCTTATTCCTCTAAATTC+TGG | 0.327929 | 3_3:+72660004 | Msa0470560:CDS |
AGCCAAGGAAAACTTTATAT+TGG | 0.340396 | 3_3:+72666446 | Msa0470560:CDS |
GTCAAGATCCCTTGAGGAAA+TGG | 0.354823 | 3_3:+72664669 | Msa0470560:CDS |
AGGGATTGGTCTTGATGTTT+CGG | 0.356607 | 3_3:+72660872 | Msa0470560:CDS |
ATCAATGTGTACGGAATGTT+TGG | 0.362479 | 3_3:+72660659 | Msa0470560:CDS |
GTGTTACTGCGGGTTCTTAT+TGG | 0.363147 | 3_3:+72660813 | Msa0470560:CDS |
GAGGCAATGTGATAGGGTTT+TGG | 0.363399 | 3_3:+72660374 | Msa0470560:CDS |
GTATATATACAGCAAAATTT+CGG | 0.365622 | 3_3:-72667359 | None:intergenic |
AAAGAGTCTTCTTAAGTGAT+AGG | 0.366104 | 3_3:-72660959 | None:intergenic |
AGGTTTGGTTGCTGGCAGTT+TGG | 0.370091 | 3_3:+72660512 | Msa0470560:CDS |
GGATGTAAGGAAATCCATTC+AGG | 0.371810 | 3_3:+72661025 | Msa0470560:CDS |
TTCTGACATGGAGGAGTTAC+CGG | 0.372552 | 3_3:+72659705 | Msa0470560:exon |
GAACTGACCGTCAACGCATT+TGG | 0.372554 | 3_3:+72666383 | Msa0470560:CDS |
GGTGATGGGAAGAAAGATTA+TGG | 0.376930 | 3_3:+72660596 | Msa0470560:CDS |
TGTCCGTGTATGGTCCTTGC+AGG | 0.380459 | 3_3:+72663611 | Msa0470560:CDS |
GTGCTAGGGGAAGATCTTCC+TGG | 0.384634 | 3_3:+72665038 | Msa0470560:CDS |
GCGGGGCAACGAATTGTGTT+TGG | 0.385640 | 3_3:-72659838 | None:intergenic |
TTCGGCTAGTTATATTTCTT+GGG | 0.389745 | 3_3:+72660890 | Msa0470560:CDS |
GAAGACTCTTTGCAAGTGTC+TGG | 0.389805 | 3_3:+72660971 | Msa0470560:CDS |
AATTTGGAAGGTTTGGTTGC+TGG | 0.392358 | 3_3:+72660504 | Msa0470560:CDS |
TTCCTTACATCCACAACATC+TGG | 0.395450 | 3_3:-72661014 | None:intergenic |
AAGCTCGGCTTCCAGAGTTC+TGG | 0.402186 | 3_3:+72667383 | Msa0470560:three_prime_UTR |
TGGATTGGATTATCTACATC+TGG | 0.404388 | 3_3:-72667424 | None:intergenic |
CTCATCAGACCAGAATTTAG+AGG | 0.409193 | 3_3:-72660013 | None:intergenic |
TTAAACTTTGAATCAGTAAC+CGG | 0.410365 | 3_3:-72660186 | None:intergenic |
CTCAAGCAACTGACACAACT+TGG | 0.412877 | 3_3:-72661135 | None:intergenic |
GTTGCTTGAGGAAAGTTCTA+AGG | 0.414180 | 3_3:+72661148 | Msa0470560:CDS |
TGCTTGGATTATCAAGTGTT+TGG | 0.414901 | 3_3:+72660221 | Msa0470560:CDS |
AGCATATTCATTGTTGATTG+AGG | 0.416299 | 3_3:-72659986 | None:intergenic |
TTGATAAAACTGTCCGTGTA+TGG | 0.421746 | 3_3:+72663601 | Msa0470560:CDS |
GGGAAGAAAGATTATGGATC+AGG | 0.422516 | 3_3:+72660602 | Msa0470560:CDS |
ATTCGGAGCTTACAGTAAAT+AGG | 0.423958 | 3_3:+72661084 | Msa0470560:CDS |
TTAAGTTTAGTTATGTTGCT+TGG | 0.425344 | 3_3:+72660205 | Msa0470560:CDS |
CAGAAGGATTGGCGCTTTAG+TGG | 0.425799 | 3_3:+72664698 | Msa0470560:CDS |
AATCCAAATTATGCCTCTAC+AGG | 0.428267 | 3_3:+72667441 | Msa0470560:three_prime_UTR |
AAGAGAAGAAGGGCCTTGAT+TGG | 0.431693 | 3_3:-72659887 | None:intergenic |
TTTACGCTGCTTGGAAGGAT+TGG | 0.433206 | 3_3:+72660037 | Msa0470560:CDS |
CATAGCCCGTTGGCGGTGCT+AGG | 0.434963 | 3_3:+72665023 | Msa0470560:CDS |
GCCTGCAACCCGTGTTCTCT+CGG | 0.437862 | 3_3:-72661173 | None:intergenic |
GGCCATCTTGGTTGTATCAC+TGG | 0.438571 | 3_3:+72661305 | Msa0470560:CDS |
AGGTTCTTTACAGTGGTAGT+TGG | 0.439248 | 3_3:+72664967 | Msa0470560:CDS |
ATGAAGAGTGGTGTTGTTGT+TGG | 0.440174 | 3_3:-72659942 | None:intergenic |
TCTAAAGGTAGGGTTTGCTT+TGG | 0.441851 | 3_3:+72660120 | Msa0470560:CDS |
TATAGCTGTCACAACAGAAC+TGG | 0.445426 | 3_3:-72666417 | None:intergenic |
CTTCCCCTAGCACCGCCAAC+GGG | 0.446882 | 3_3:-72665028 | None:intergenic |
TCCGATTGTTACTTTGTCTC+CGG | 0.448029 | 3_3:+72660167 | Msa0470560:CDS |
TTGGGTATGGCTCGGATGTA+TGG | 0.449228 | 3_3:+72660778 | Msa0470560:CDS |
CTCAAGGGATCTTGACTAAG+AGG | 0.453735 | 3_3:-72664662 | None:intergenic |
ATATGAGAATGGTTGCATAA+AGG | 0.454174 | 3_3:+72665115 | Msa0470560:CDS |
TCACGACACCGTTTCCGTTA+CGG | 0.454390 | 3_3:+72660068 | Msa0470560:CDS |
GTCCAGATGTTGTGGATGTA+AGG | 0.454904 | 3_3:+72661012 | Msa0470560:CDS |
TCCTGGCTATTACTGCTAGT+AGG | 0.455054 | 3_3:+72665075 | Msa0470560:CDS |
AAAGATCTGCAAGGCCATCT+TGG | 0.455347 | 3_3:+72661293 | Msa0470560:CDS |
TGTAGAGGCATAATTTGGAT+TGG | 0.457218 | 3_3:-72667439 | None:intergenic |
AATTTGGTGGATTGATGAAT+GGG | 0.459741 | 3_3:+72660400 | Msa0470560:CDS |
TGGAGAGATGAAGTCTATCC+TGG | 0.460630 | 3_3:+72665058 | Msa0470560:CDS |
GGTTCTTTACAGTGGTAGTT+GGG | 0.460743 | 3_3:+72664968 | Msa0470560:CDS |
TATCTCGAATCCCCGCTCTC+TGG | 0.461547 | 3_3:-72660750 | None:intergenic |
TGTATCACTGGATTAGCTAT+AGG | 0.462511 | 3_3:+72661317 | Msa0470560:CDS |
TCAAAATTGTCGTTTAGGTA+AGG | 0.464628 | 3_3:+72659629 | Msa0470560:five_prime_UTR |
AAATTTGGTGGATTGATGAA+TGG | 0.465950 | 3_3:+72660399 | Msa0470560:CDS |
TGCTGTATATATACGAAGCT+CGG | 0.466277 | 3_3:+72667368 | Msa0470560:three_prime_UTR |
AGTTCCAAAACATTGCATAA+TGG | 0.466755 | 3_3:+72665305 | Msa0470560:CDS |
GATCAGGTTTCTGGTGGTAC+AGG | 0.466770 | 3_3:+72660618 | Msa0470560:CDS |
TGAGGCAGAGTAGGTTGTGT+AGG | 0.471499 | 3_3:+72660298 | Msa0470560:CDS |
GTTTGGATTTGGATAAAGAT+GGG | 0.472854 | 3_3:+72660427 | Msa0470560:CDS |
CTAGTATAACTGAAAGAAGT+AGG | 0.474663 | 3_3:-72666495 | None:intergenic |
GTTAAATACTCTCCCAATCA+AGG | 0.476233 | 3_3:+72659874 | Msa0470560:CDS |
AATCAAAGCTTGGTCATTGA+AGG | 0.476514 | 3_3:+72664778 | Msa0470560:CDS |
GGATTGTGGAGTGAGGTTGT+TGG | 0.478869 | 3_3:+72660327 | Msa0470560:CDS |
TTTGGCTAACAAATCCTGAA+TGG | 0.481519 | 3_3:-72661039 | None:intergenic |
CAGGGAAAATGGCTTTATAC+AGG | 0.484074 | 3_3:+72665350 | Msa0470560:CDS |
CCTGGCTATTACTGCTAGTA+GGG | 0.484919 | 3_3:+72665076 | Msa0470560:CDS |
TTAATTCGAGTTCTAAAGGT+AGG | 0.485679 | 3_3:+72660109 | Msa0470560:CDS |
TTTGTGAGAGGCAATGTGAT+AGG | 0.487545 | 3_3:+72660367 | Msa0470560:CDS |
ATGGCTTTATACAGGAGGTT+GGG | 0.489479 | 3_3:+72665358 | Msa0470560:CDS |
AGAGAAGAAGGGCCTTGATT+GGG | 0.489930 | 3_3:-72659886 | None:intergenic |
TTGAGAATCAACCAGAACTC+TGG | 0.490296 | 3_3:-72667394 | None:intergenic |
TGTGTAGGGTTTATGGATTG+TGG | 0.490422 | 3_3:+72660313 | Msa0470560:CDS |
AGGTTTAATTCGAGTTCTAA+AGG | 0.490463 | 3_3:+72660105 | Msa0470560:CDS |
GGTCAACCTGATATTCTTCA+AGG | 0.493033 | 3_3:+72661209 | Msa0470560:CDS |
AGGATAGACTTCATCTCTCC+AGG | 0.494704 | 3_3:-72665056 | None:intergenic |
CTTTACAGTGGTAGTTGGGA+TGG | 0.497299 | 3_3:+72664972 | Msa0470560:CDS |
CCCTACTAGCAGTAATAGCC+AGG | 0.497677 | 3_3:-72665076 | None:intergenic |
GTGTTTGGAGGGGATGAATG+AGG | 0.497792 | 3_3:+72660236 | Msa0470560:CDS |
CTGGTTGCAGCATATGAGAA+TGG | 0.500700 | 3_3:+72665104 | Msa0470560:CDS |
AATCTTCTCTACACTGGAAG+TGG | 0.502004 | 3_3:+72664746 | Msa0470560:CDS |
ACATCCGAGCCATACCCAAT+TGG | 0.504830 | 3_3:-72660774 | None:intergenic |
ACCGTCCTCCGTAACGGAAA+CGG | 0.506840 | 3_3:-72660076 | None:intergenic |
AATGGATCCAAATGCGTTGA+CGG | 0.506874 | 3_3:-72666390 | None:intergenic |
TCTTCCCCTAGCACCGCCAA+CGG | 0.508437 | 3_3:-72665029 | None:intergenic |
ATAGCCCGTTGGCGGTGCTA+GGG | 0.509770 | 3_3:+72665024 | Msa0470560:CDS |
AAGAGTGGTGTTGTTGTTGG+AGG | 0.509790 | 3_3:-72659939 | None:intergenic |
TATTGATTTGAATGAGGTGT+TGG | 0.511432 | 3_3:+72660575 | Msa0470560:CDS |
AAGCTTCTGTGAGGCAGAGT+AGG | 0.512120 | 3_3:+72660289 | Msa0470560:CDS |
AATGGCTTTATACAGGAGGT+TGG | 0.513077 | 3_3:+72665357 | Msa0470560:CDS |
ACCGGAGACAAAGTAACAAT+CGG | 0.513169 | 3_3:-72660168 | None:intergenic |
TTGTGAGAGGCAATGTGATA+GGG | 0.516393 | 3_3:+72660368 | Msa0470560:CDS |
GTATAAGTGGTGACAGTGGT+GGG | 0.516765 | 3_3:+72664612 | Msa0470560:CDS |
GAGGCAGAGTAGGTTGTGTA+GGG | 0.517876 | 3_3:+72660299 | Msa0470560:CDS |
GGTTTGGATTTGGATAAAGA+TGG | 0.519953 | 3_3:+72660426 | Msa0470560:CDS |
GATCATTAAGACTCCACAAT+CGG | 0.520154 | 3_3:-72665001 | None:intergenic |
AAGATTTCCAAAAGCAGTCA+AGG | 0.523625 | 3_3:-72664729 | None:intergenic |
TGGATTATCAAGTGTTTGGA+GGG | 0.523864 | 3_3:+72660225 | Msa0470560:CDS |
CAAGTGTCTGGACATCAATC+CGG | 0.524842 | 3_3:+72660983 | Msa0470560:CDS |
TTGGATTATCAAGTGTTTGG+AGG | 0.526322 | 3_3:+72660224 | Msa0470560:CDS |
GGGGATTCGAGATATCCAAT+TGG | 0.527639 | 3_3:+72660759 | Msa0470560:CDS |
TTGAATGAGGTGTTGGTGAT+GGG | 0.530062 | 3_3:+72660582 | Msa0470560:CDS |
GTGTGGAAACTACAGATTTG+TGG | 0.530478 | 3_3:-72664929 | None:intergenic |
TTGTGGAGTGAGGTTGTTGG+TGG | 0.531084 | 3_3:+72660330 | Msa0470560:CDS |
GGGATTCGAGATATCCAATT+GGG | 0.532341 | 3_3:+72660760 | Msa0470560:CDS |
GAAGAACAATTGTGTATAAG+TGG | 0.532526 | 3_3:+72664599 | Msa0470560:CDS |
TGCTCATACCATTTCCTCAA+GGG | 0.533245 | 3_3:-72664677 | None:intergenic |
TTTGGAAATCTTCTCTACAC+TGG | 0.533385 | 3_3:+72664740 | Msa0470560:CDS |
GGCTAGTTATATTTCTTGGG+TGG | 0.533784 | 3_3:+72660893 | Msa0470560:CDS |
AATGGTATGAGCAGAAGGAT+TGG | 0.533822 | 3_3:+72664687 | Msa0470560:CDS |
GGGTTGTTAATCCAGAGAGC+GGG | 0.535616 | 3_3:+72660739 | Msa0470560:CDS |
GTTGGCTTGTGTGTTACTGC+GGG | 0.537241 | 3_3:+72660803 | Msa0470560:CDS |
GAGATAGAACAATCAAAGCT+TGG | 0.538440 | 3_3:+72664768 | Msa0470560:CDS |
TCGAGATATCCAATTGGGTA+TGG | 0.539288 | 3_3:+72660765 | Msa0470560:CDS |
TTTGAATGAGGTGTTGGTGA+TGG | 0.540538 | 3_3:+72660581 | Msa0470560:CDS |
GTGATTGCTTTGAATTTGGA+AGG | 0.540919 | 3_3:+72660492 | Msa0470560:CDS |
GGTTTATATTGATTTGAATG+AGG | 0.541525 | 3_3:+72660569 | Msa0470560:CDS |
TCCGTTACGGAGGACGGTGT+TGG | 0.541771 | 3_3:+72660081 | Msa0470560:CDS |
CACAACAGAACTGGAAGGAA+TGG | 0.544135 | 3_3:-72666408 | None:intergenic |
ACCGTTTCCGTTACGGAGGA+CGG | 0.544367 | 3_3:+72660075 | Msa0470560:CDS |
TGTATAAGTGGTGACAGTGG+TGG | 0.544674 | 3_3:+72664611 | Msa0470560:CDS |
TAATGATCATAGCCCGTTGG+CGG | 0.547663 | 3_3:+72665016 | Msa0470560:CDS |
AATCCCTTCACTCATTTCAA+AGG | 0.548019 | 3_3:-72660856 | None:intergenic |
ATAAGTGGTGACAGTGGTGG+GGG | 0.548080 | 3_3:+72664614 | Msa0470560:CDS |
GTCTGTATTTGGTTTGTGAG+AGG | 0.548791 | 3_3:+72660355 | Msa0470560:CDS |
TAATTCGAGTTCTAAAGGTA+GGG | 0.553340 | 3_3:+72660110 | Msa0470560:CDS |
TTTAACGAGTTGAGTACAAG+CGG | 0.554358 | 3_3:-72659857 | None:intergenic |
GAGGAAATGGTATGAGCAGA+AGG | 0.554915 | 3_3:+72664682 | Msa0470560:CDS |
GGGATGGAACCGTCCGATTG+TGG | 0.559949 | 3_3:+72664988 | Msa0470560:CDS |
GGGTTGCAGGCAAAAGAAGA+TGG | 0.561544 | 3_3:+72661185 | Msa0470560:CDS |
CTCATCACATACTGAAAGTG+TGG | 0.564117 | 3_3:-72664946 | None:intergenic |
ATCACACGAATCAATGTGTA+CGG | 0.564226 | 3_3:+72660650 | Msa0470560:CDS |
GCATGAGAGTACTCGTGGAA+TGG | 0.566164 | 3_3:-72659767 | None:intergenic |
TCTAAGGAGCCGAGAGAACA+CGG | 0.567350 | 3_3:+72661164 | Msa0470560:CDS |
GGAAAATCGTCCAGATGTTG+TGG | 0.567436 | 3_3:+72661004 | Msa0470560:CDS |
TGGCTCGGATGTATGGTCGT+TGG | 0.568827 | 3_3:+72660785 | Msa0470560:CDS |
TTTGAAATGAGTGAAGGGAT+TGG | 0.571973 | 3_3:+72660858 | Msa0470560:CDS |
TATAAGTGGTGACAGTGGTG+GGG | 0.572756 | 3_3:+72664613 | Msa0470560:CDS |
CTCATTTCAAAGGTAGTCCG+AGG | 0.574138 | 3_3:-72660846 | None:intergenic |
GGTTTATGGATTGTGGAGTG+AGG | 0.575795 | 3_3:+72660320 | Msa0470560:CDS |
TTATTGGAAACAAACTCCCT+CGG | 0.575959 | 3_3:+72660829 | Msa0470560:CDS |
ATTTAGAAGTGTTACCTGCA+AGG | 0.577116 | 3_3:-72663625 | None:intergenic |
CGTTGGCTTGTGTGTTACTG+CGG | 0.578583 | 3_3:+72660802 | Msa0470560:CDS |
TAGCCCGTTGGCGGTGCTAG+GGG | 0.579671 | 3_3:+72665025 | Msa0470560:CDS |
ACTTTGATGTACACAATGGA+TGG | 0.581782 | 3_3:+72664906 | Msa0470560:CDS |
ATCATTCCTTGAGATAAGCT+AGG | 0.583531 | 3_3:-72661263 | None:intergenic |
CTACCTTTGAAATGAGTGAA+GGG | 0.585728 | 3_3:+72660853 | Msa0470560:CDS |
GGATTATCAAGTGTTTGGAG+GGG | 0.589886 | 3_3:+72660226 | Msa0470560:CDS |
CACACTTTCAGTATGTGATG+AGG | 0.590444 | 3_3:+72664947 | Msa0470560:CDS |
ATATGGTGACAAGTCTATCA+AGG | 0.591214 | 3_3:+72666469 | Msa0470560:CDS |
ACCAACACCGTCCTCCGTAA+CGG | 0.593312 | 3_3:-72660082 | None:intergenic |
CTGCTCATACCATTTCCTCA+AGG | 0.594767 | 3_3:-72664678 | None:intergenic |
ATATCCAATTGGGTATGGCT+CGG | 0.596032 | 3_3:+72660770 | Msa0470560:CDS |
CGAATTGTGTTTGGAAATCG+CGG | 0.596918 | 3_3:-72659829 | None:intergenic |
TTAACGAGTTGAGTACAAGC+GGG | 0.597571 | 3_3:-72659856 | None:intergenic |
ACCTGATATTCTTCAAGGTG+CGG | 0.597653 | 3_3:+72661214 | Msa0470560:CDS |
ATCCAGTGATACAACCAAGA+TGG | 0.600852 | 3_3:-72661307 | None:intergenic |
CATCATCATCTCAAAATCAA+CGG | 0.601811 | 3_3:+72659962 | Msa0470560:CDS |
GCTAGGAGTGAAGTCTTCAT+CGG | 0.602547 | 3_3:-72661246 | None:intergenic |
AACTGTAAACTGTTCTGACA+TGG | 0.603543 | 3_3:+72659693 | Msa0470560:exon |
ATTTGGTGGATTGATGAATG+GGG | 0.606315 | 3_3:+72660401 | Msa0470560:CDS |
TTACGGAGGACGGTGTTGGT+AGG | 0.607129 | 3_3:+72660085 | Msa0470560:CDS |
TTTGGTGGATTGATGAATGG+GGG | 0.607512 | 3_3:+72660402 | Msa0470560:CDS |
TTGCTTTGGAGTTAACCGTA+CGG | 0.607687 | 3_3:+72660134 | Msa0470560:CDS |
ATCACTGGATTAGCTATAGG+AGG | 0.612020 | 3_3:+72661320 | Msa0470560:CDS |
ACAGCTATATTATGCAGCCA+AGG | 0.613073 | 3_3:+72666431 | Msa0470560:CDS |
TGGCCGCATGAGAGTACTCG+TGG | 0.615484 | 3_3:-72659772 | None:intergenic |
TGTTTGGAAATCGCGGTGGA+AGG | 0.617516 | 3_3:-72659822 | None:intergenic |
ACTACCTTTGAAATGAGTGA+AGG | 0.618512 | 3_3:+72660852 | Msa0470560:CDS |
TGAAGACACACTGGGCACTC+CGG | 0.618973 | 3_3:-72659724 | None:intergenic |
AGAGTGGTGTTGTTGTTGGA+GGG | 0.620624 | 3_3:-72659938 | None:intergenic |
TTCACTCCTAGCTTATCTCA+AGG | 0.623003 | 3_3:+72661257 | Msa0470560:CDS |
ATTATGGATCAGGTTTCTGG+TGG | 0.626952 | 3_3:+72660612 | Msa0470560:CDS |
GGAAAATGGCTTTATACAGG+AGG | 0.630205 | 3_3:+72665353 | Msa0470560:CDS |
CTCTTAGTCAAGATCCCTTG+AGG | 0.633330 | 3_3:+72664663 | Msa0470560:CDS |
CAAGTTGTGTCAGTTGCTTG+AGG | 0.635322 | 3_3:+72661136 | Msa0470560:CDS |
AGGTCATGAGAATAAAGTCA+TGG | 0.635591 | 3_3:+72664556 | Msa0470560:CDS |
GTAACGGAAACGGTGTCGTG+AGG | 0.637625 | 3_3:-72660066 | None:intergenic |
GTGTACAGAACACCCTGTAG+AGG | 0.641226 | 3_3:-72667454 | None:intergenic |
TGTGATGAGGTTCTTTACAG+TGG | 0.644038 | 3_3:+72664960 | Msa0470560:CDS |
ATCCAAATTATGCCTCTACA+GGG | 0.644079 | 3_3:+72667442 | Msa0470560:three_prime_UTR |
GGTTGTTAATCCAGAGAGCG+GGG | 0.649343 | 3_3:+72660740 | Msa0470560:CDS |
TCTTAATGATCATAGCCCGT+TGG | 0.652717 | 3_3:+72665013 | Msa0470560:CDS |
TTTGAGATGATGATGAAGAG+TGG | 0.654507 | 3_3:-72659954 | None:intergenic |
TTACCTGCAAGGACCATACA+CGG | 0.655657 | 3_3:-72663614 | None:intergenic |
CGGAACTTTGATGTACACAA+TGG | 0.657820 | 3_3:+72664902 | Msa0470560:CDS |
GCTGTCACAACAGAACTGGA+AGG | 0.658093 | 3_3:-72666413 | None:intergenic |
ACAACTTGGCAAGAATTACA+GGG | 0.663506 | 3_3:-72661121 | None:intergenic |
TCATTTCAAAGGTAGTCCGA+GGG | 0.667464 | 3_3:-72660845 | None:intergenic |
AGGGTTGTTAATCCAGAGAG+CGG | 0.668851 | 3_3:+72660738 | Msa0470560:CDS |
CTAAGGAGCCGAGAGAACAC+GGG | 0.671397 | 3_3:+72661165 | Msa0470560:CDS |
TCGGAGCTAAACTCACCGTA+CGG | 0.673358 | 3_3:-72660149 | None:intergenic |
TAACGAGTTGAGTACAAGCG+GGG | 0.674056 | 3_3:-72659855 | None:intergenic |
TGTAAACTGTTCTGACATGG+AGG | 0.682323 | 3_3:+72659696 | Msa0470560:exon |
ATTGAGCTTAAAGATCTGCA+AGG | 0.682677 | 3_3:+72661284 | Msa0470560:CDS |
ATTAAGACTCCACAATCGGA+CGG | 0.684451 | 3_3:-72664997 | None:intergenic |
TTGCAGGCAAAAGAAGATGG+TGG | 0.691934 | 3_3:+72661188 | Msa0470560:CDS |
ATTGTGTTTGGAAATCGCGG+TGG | 0.700486 | 3_3:-72659826 | None:intergenic |
ACAGTAAATAGGAACAACAC+AGG | 0.702483 | 3_3:+72661095 | Msa0470560:CDS |
CGACACCGTTTCCGTTACGG+AGG | 0.709999 | 3_3:+72660071 | Msa0470560:CDS |
TGATTCTAGAAGCTTCTGTG+AGG | 0.720899 | 3_3:+72660280 | Msa0470560:CDS |
ATTCCACGAGTACTCTCATG+CGG | 0.727907 | 3_3:+72659769 | Msa0470560:CDS |
TTGTGTATAAGTGGTGACAG+TGG | 0.730045 | 3_3:+72664608 | Msa0470560:CDS |
GACAAGCTTCACAAACAGTG+TGG | 0.731083 | 3_3:-72659792 | None:intergenic |
AAAACTTAGACAAAACCTCG+GGG | 0.768361 | 3_3:-72660707 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCCATTTTATTTTAATAAAT+AGG | + | chr3_3:72664000-72664019 | Msa0470560:intron | 10.0% |
!! | TCCTATTTATTAAAATAAAA+TGG | - | chr3_3:72664004-72664023 | None:intergenic | 10.0% |
!!! | TCTTAACAAATTTTTTTTTT+TGG | + | chr3_3:72664409-72664428 | Msa0470560:intron | 10.0% |
!! | TAAGATCAAAATATATTATT+TGG | - | chr3_3:72665702-72665721 | None:intergenic | 10.0% |
!!! | TTATAAAAACATTACGATTT+TGG | - | chr3_3:72659655-72659674 | None:intergenic | 15.0% |
!!! | TTTTTTTTTAACTACAAAGA+GGG | + | chr3_3:72661625-72661644 | Msa0470560:intron | 15.0% |
!!! | TTTATCACAATTTTTTATCA+CGG | - | chr3_3:72662755-72662774 | None:intergenic | 15.0% |
!!! | TTGTGATAAATTTTTCATAA+TGG | + | chr3_3:72662765-72662784 | Msa0470560:intron | 15.0% |
!!! | AAATAATTTATTTCTTTTGC+TGG | - | chr3_3:72662809-72662828 | None:intergenic | 15.0% |
!! | TTTGTTAAATCTTCATAAAA+TGG | + | chr3_3:72662895-72662914 | Msa0470560:intron | 15.0% |
!! | TTGTTAAATCTTCATAAAAT+GGG | + | chr3_3:72662896-72662915 | Msa0470560:intron | 15.0% |
!!! | TTGTTTACATTTATTTTTGA+AGG | - | chr3_3:72664188-72664207 | None:intergenic | 15.0% |
!!! | CAACTCATTAATATTTTAAA+GGG | - | chr3_3:72665170-72665189 | None:intergenic | 15.0% |
!!! | ACAACTCATTAATATTTTAA+AGG | - | chr3_3:72665171-72665190 | None:intergenic | 15.0% |
!!! | TATTAGTTTACTTTATCTTT+AGG | - | chr3_3:72665652-72665671 | None:intergenic | 15.0% |
!!! | GTTTCAAATATTTCTTTTTT+CGG | - | chr3_3:72666990-72667009 | None:intergenic | 15.0% |
!!! | TTTGTTTTGGAAGAAAAAAT+TGG | + | chr3_3:72660927-72660946 | Msa0470560:CDS | 20.0% |
!!! | TACTTAACACTATATTTTCA+AGG | + | chr3_3:72661429-72661448 | Msa0470560:intron | 20.0% |
!!! | GTTTTTTTTTAACTACAAAG+AGG | + | chr3_3:72661624-72661643 | Msa0470560:intron | 20.0% |
!! | TCTCATAATACATCAAAATT+TGG | + | chr3_3:72661744-72661763 | Msa0470560:intron | 20.0% |
!! | CATAACGACTAATAATAAAA+TGG | - | chr3_3:72662428-72662447 | None:intergenic | 20.0% |
!! | AAAGAAGAAAGAGTAATAAA+TGG | + | chr3_3:72662563-72662582 | Msa0470560:intron | 20.0% |
!! | AAAGAGTAATAAATGGTAAA+GGG | + | chr3_3:72662570-72662589 | Msa0470560:intron | 20.0% |
!!! | AATATGATAGAGAAGATTTT+AGG | + | chr3_3:72663299-72663318 | Msa0470560:intron | 20.0% |
!!! | TGTCATTGAATTCAAATTTT+GGG | - | chr3_3:72664247-72664266 | None:intergenic | 20.0% |
!!! | TTGTCATTGAATTCAAATTT+TGG | - | chr3_3:72664248-72664267 | None:intergenic | 20.0% |
!!! | TCATTAATATTTTAAAGGGA+AGG | - | chr3_3:72665166-72665185 | None:intergenic | 20.0% |
!! | AAGTGTATTTCATTTCAAAT+GGG | - | chr3_3:72665196-72665215 | None:intergenic | 20.0% |
!!! | TCTATTTTTTTTGCCTATTT+AGG | + | chr3_3:72665259-72665278 | Msa0470560:intron | 20.0% |
!! | AGTATCTTAATTTATTTCCT+AGG | - | chr3_3:72665577-72665596 | None:intergenic | 20.0% |
!!! | AGACTTTTAAATTATGAATG+TGG | + | chr3_3:72666028-72666047 | Msa0470560:intron | 20.0% |
!! | ACACTAATCCATAATTAAAT+AGG | + | chr3_3:72666109-72666128 | Msa0470560:intron | 20.0% |
!! | CACTAATCCATAATTAAATA+GGG | + | chr3_3:72666110-72666129 | Msa0470560:intron | 20.0% |
!! | TAACTATATCTATTATCTTG+AGG | - | chr3_3:72666243-72666262 | None:intergenic | 20.0% |
!!! | TAAAAAGAGTATTGAATTGT+AGG | + | chr3_3:72666340-72666359 | Msa0470560:intron | 20.0% |
!! | CAAATGAAATATTGACATAA+TGG | + | chr3_3:72666584-72666603 | Msa0470560:intron | 20.0% |
!!! | CATTTTTAAAACAAAACAGT+TGG | + | chr3_3:72666721-72666740 | Msa0470560:intron | 20.0% |
!!! | GATTTTTCATTCAACAATAT+GGG | - | chr3_3:72666918-72666937 | None:intergenic | 20.0% |
!!! | ATTATTAATTTGATTTCTGC+AGG | + | chr3_3:72667260-72667279 | Msa0470560:intron | 20.0% |
!! | GTATATATACAGCAAAATTT+CGG | - | chr3_3:72667362-72667381 | None:intergenic | 20.0% |
!!! | TTCAACTGATATTTTCTTTT+TGG | + | chr3_3:72667478-72667497 | Msa0470560:three_prime_UTR | 20.0% |
!!! | TCAACTGATATTTTCTTTTT+GGG | + | chr3_3:72667479-72667498 | Msa0470560:three_prime_UTR | 20.0% |
! | TTAAACTTTGAATCAGTAAC+CGG | - | chr3_3:72660189-72660208 | None:intergenic | 25.0% |
! | TTAAGTTTAGTTATGTTGCT+TGG | + | chr3_3:72660205-72660224 | Msa0470560:CDS | 25.0% |
!!! | AAAGATGGGTTTTTTAGTTT+TGG | + | chr3_3:72660441-72660460 | Msa0470560:CDS | 25.0% |
!!! | GGTTTATATTGATTTGAATG+AGG | + | chr3_3:72660569-72660588 | Msa0470560:CDS | 25.0% |
! | AATCACTCAAAAAACCAAAT+TGG | - | chr3_3:72661067-72661086 | None:intergenic | 25.0% |
!!! | ATTTGGTTTTTTGAGTGATT+CGG | + | chr3_3:72661067-72661086 | Msa0470560:CDS | 25.0% |
! | ATTTCCATTTCTTATCAAAG+AGG | + | chr3_3:72661467-72661486 | Msa0470560:intron | 25.0% |
! | AGATAGGTTATCTGATAAAT+AGG | + | chr3_3:72661522-72661541 | Msa0470560:intron | 25.0% |
! | TTATCTGATAAATAGGCTTA+AGG | + | chr3_3:72661529-72661548 | Msa0470560:intron | 25.0% |
! | TTAAATGCAACCTATATACT+TGG | + | chr3_3:72661798-72661817 | Msa0470560:intron | 25.0% |
! | TAACTAAGAACCAAGTATAT+AGG | - | chr3_3:72661811-72661830 | None:intergenic | 25.0% |
!!! | AAAATTTTAGGAGAGAGATT+CGG | - | chr3_3:72662089-72662108 | None:intergenic | 25.0% |
!! | AAGATGACAGAGAAAATTTT+AGG | - | chr3_3:72662101-72662120 | None:intergenic | 25.0% |
! | TAGGTCAAATATTAGGTAAA+GGG | - | chr3_3:72663188-72663207 | None:intergenic | 25.0% |
! | TTAGGTCAAATATTAGGTAA+AGG | - | chr3_3:72663187-72663206 | None:intergenic | 25.0% |
!! | AACTTGCTTATATCTTGAAA+GGG | + | chr3_3:72662245-72662264 | Msa0470560:intron | 25.0% |
!! | TCTTGAAATCTAAAACTGAT+TGG | + | chr3_3:72662355-72662374 | Msa0470560:intron | 25.0% |
! | AACGACTAATAATAAAATGG+CGG | - | chr3_3:72662425-72662444 | None:intergenic | 25.0% |
! | GAAAGAGTAATAAATGGTAA+AGG | + | chr3_3:72662569-72662588 | Msa0470560:intron | 25.0% |
! | GGTATATATAGAAAAGAAAG+CGG | - | chr3_3:72662850-72662869 | None:intergenic | 25.0% |
!! | GCTTTCTTTTCTATATATAC+CGG | + | chr3_3:72662849-72662868 | Msa0470560:intron | 25.0% |
!! | AACTTGCTTATATCTTGAAA+GGG | - | chr3_3:72662245-72662264 | None:intergenic | 25.0% |
! | TACAGTTTAGGTCAAATATT+AGG | + | chr3_3:72663181-72663200 | Msa0470560:intron | 25.0% |
! | TTAGGTCAAATATTAGGTAA+AGG | + | chr3_3:72663187-72663206 | Msa0470560:intron | 25.0% |
! | TAGGTCAAATATTAGGTAAA+GGG | + | chr3_3:72663188-72663207 | Msa0470560:intron | 25.0% |
! | CTTGTACATCAATATTAAAG+AGG | + | chr3_3:72663263-72663282 | Msa0470560:intron | 25.0% |
!! | AATCATTTGTTTAGTTTCAC+AGG | + | chr3_3:72663555-72663574 | Msa0470560:intron | 25.0% |
!! | ATCATTTGTTTAGTTTCACA+GGG | + | chr3_3:72663556-72663575 | Msa0470560:intron | 25.0% |
! | TCATTAATAATCTTTGCATG+AGG | + | chr3_3:72663697-72663716 | Msa0470560:intron | 25.0% |
! | TTTCCAGTAAATAGTTATTC+AGG | + | chr3_3:72663775-72663794 | Msa0470560:intron | 25.0% |
! | AAACCTGAATAACTATTTAC+TGG | - | chr3_3:72663781-72663800 | None:intergenic | 25.0% |
! | TAGCATTTATGTTTGTGTAT+CGG | - | chr3_3:72663857-72663876 | None:intergenic | 25.0% |
! | TAATTGTGTTCTGCATAATT+TGG | + | chr3_3:72663951-72663970 | Msa0470560:intron | 25.0% |
! | ACCAATAAATAAAAAGTGAG+AGG | + | chr3_3:72664076-72664095 | Msa0470560:intron | 25.0% |
!!! | TCCTCTCACTTTTTATTTAT+TGG | - | chr3_3:72664080-72664099 | None:intergenic | 25.0% |
!! | CTCTTTTCTTTACATAAAAC+TGG | + | chr3_3:72664338-72664357 | Msa0470560:intron | 25.0% |
! | CAAGTGTATTTCATTTCAAA+TGG | - | chr3_3:72665197-72665216 | None:intergenic | 25.0% |
! | GGACAAAAATGTTAATATAC+AGG | + | chr3_3:72665379-72665398 | Msa0470560:CDS | 25.0% |
!! | AAAATCTTGTGCTATGTTTT+TGG | + | chr3_3:72665411-72665430 | Msa0470560:intron | 25.0% |
!! | AAATCTTGTGCTATGTTTTT+GGG | + | chr3_3:72665412-72665431 | Msa0470560:intron | 25.0% |
! | ATTATGATTGTTGAAGTTAC+AGG | + | chr3_3:72665509-72665528 | Msa0470560:intron | 25.0% |
! | TTATGATTGTTGAAGTTACA+GGG | + | chr3_3:72665510-72665529 | Msa0470560:intron | 25.0% |
!!! | CTAGGATTATTTTATCAACA+TGG | - | chr3_3:72665559-72665578 | None:intergenic | 25.0% |
!! | CATGTTGATAAAATAATCCT+AGG | + | chr3_3:72665557-72665576 | Msa0470560:intron | 25.0% |
!! | TTATCAGGATTTGCTTAAAT+AGG | + | chr3_3:72665990-72666009 | Msa0470560:intron | 25.0% |
!!! | TTATGGATTAGTGTAAGTTA+GGG | - | chr3_3:72666103-72666122 | None:intergenic | 25.0% |
!!! | ATTATGGATTAGTGTAAGTT+AGG | - | chr3_3:72666104-72666123 | None:intergenic | 25.0% |
! | TTGGTTTCCCTATTTAATTA+TGG | - | chr3_3:72666120-72666139 | None:intergenic | 25.0% |
! | TTCTTGGTTATTATCATGAT+TGG | - | chr3_3:72666139-72666158 | None:intergenic | 25.0% |
! | AGAATGGTTTCAATATTTCT+TGG | - | chr3_3:72666155-72666174 | None:intergenic | 25.0% |
! | CTTATACAATCTCTTAAGAA+TGG | - | chr3_3:72666171-72666190 | None:intergenic | 25.0% |
! | ATTGAATTGTAGGAATTATC+AGG | + | chr3_3:72666350-72666369 | Msa0470560:intron | 25.0% |
!! | ATCCAATATAAAGTTTTCCT+TGG | - | chr3_3:72666451-72666470 | None:intergenic | 25.0% |
! | GGAAAACTTTATATTGGATA+TGG | + | chr3_3:72666452-72666471 | Msa0470560:CDS | 25.0% |
! | TTATACTAGTTGTTAAACTG+TGG | + | chr3_3:72666509-72666528 | Msa0470560:intron | 25.0% |
! | GAAAGAAAATAACATCTACA+CGG | - | chr3_3:72666678-72666697 | None:intergenic | 25.0% |
!!! | TTTTAAAACAAAACAGTTGG+AGG | + | chr3_3:72666724-72666743 | Msa0470560:intron | 25.0% |
! | CTTTATAAAACACGAGAATA+AGG | - | chr3_3:72666814-72666833 | None:intergenic | 25.0% |
!! | CGATTTTTCATTCAACAATA+TGG | - | chr3_3:72666919-72666938 | None:intergenic | 25.0% |
!!! | CTTTTTTCGGTATACATTTA+GGG | - | chr3_3:72666977-72666996 | None:intergenic | 25.0% |
!!! | TCTTTTTTCGGTATACATTT+AGG | - | chr3_3:72666978-72666997 | None:intergenic | 25.0% |
! | AAGTATTTACTTTACACCAT+TGG | - | chr3_3:72667061-72667080 | None:intergenic | 25.0% |
! | GTGTATAGATTTAAATTTGC+TGG | - | chr3_3:72667118-72667137 | None:intergenic | 25.0% |
! | ATAAACAAAAGAGACAGAAA+AGG | - | chr3_3:72667211-72667230 | None:intergenic | 25.0% |
!! | CAACTGATATTTTCTTTTTG+GGG | + | chr3_3:72667480-72667499 | Msa0470560:three_prime_UTR | 25.0% |
! | AGAACTCAAAATTGTCGTTT+AGG | + | chr3_3:72659624-72659643 | Msa0470560:five_prime_UTR | 30.0% |
! | TCAAAATTGTCGTTTAGGTA+AGG | + | chr3_3:72659629-72659648 | Msa0470560:five_prime_UTR | 30.0% |
!!! | TGTTTTTAGGAAGAGAAGAA+GGG | - | chr3_3:72659900-72659919 | None:intergenic | 30.0% |
!!! | ATGTTTTTAGGAAGAGAAGA+AGG | - | chr3_3:72659901-72659920 | None:intergenic | 30.0% |
CATCATCATCTCAAAATCAA+CGG | + | chr3_3:72659962-72659981 | Msa0470560:CDS | 30.0% | |
! | AGCATATTCATTGTTGATTG+AGG | - | chr3_3:72659989-72660008 | None:intergenic | 30.0% |
ATGCTTATTCCTCTAAATTC+TGG | + | chr3_3:72660004-72660023 | Msa0470560:CDS | 30.0% | |
! | AGGTTTAATTCGAGTTCTAA+AGG | + | chr3_3:72660105-72660124 | Msa0470560:CDS | 30.0% |
!! | TTAATTCGAGTTCTAAAGGT+AGG | + | chr3_3:72660109-72660128 | Msa0470560:CDS | 30.0% |
!! | TAATTCGAGTTCTAAAGGTA+GGG | + | chr3_3:72660110-72660129 | Msa0470560:CDS | 30.0% |
!! | AAATTTGGTGGATTGATGAA+TGG | + | chr3_3:72660399-72660418 | Msa0470560:CDS | 30.0% |
!! | AATTTGGTGGATTGATGAAT+GGG | + | chr3_3:72660400-72660419 | Msa0470560:CDS | 30.0% |
GTTTGGATTTGGATAAAGAT+GGG | + | chr3_3:72660427-72660446 | Msa0470560:CDS | 30.0% | |
!!! | TAGTTTTGGAATGATTGCTA+AGG | + | chr3_3:72660455-72660474 | Msa0470560:CDS | 30.0% |
!!! | AGTTTTGGAATGATTGCTAA+GGG | + | chr3_3:72660456-72660475 | Msa0470560:CDS | 30.0% |
!! | TATTGATTTGAATGAGGTGT+TGG | + | chr3_3:72660575-72660594 | Msa0470560:CDS | 30.0% |
AAAAACTTAGACAAAACCTC+GGG | - | chr3_3:72660711-72660730 | None:intergenic | 30.0% | |
CAAAAACTTAGACAAAACCT+CGG | - | chr3_3:72660712-72660731 | None:intergenic | 30.0% | |
! | TGTCTAAGTTTTTGAACAAG+AGG | + | chr3_3:72660718-72660737 | Msa0470560:CDS | 30.0% |
! | GTCTAAGTTTTTGAACAAGA+GGG | + | chr3_3:72660719-72660738 | Msa0470560:CDS | 30.0% |
! | TTTCGGCTAGTTATATTTCT+TGG | + | chr3_3:72660889-72660908 | Msa0470560:CDS | 30.0% |
! | TTCGGCTAGTTATATTTCTT+GGG | + | chr3_3:72660890-72660909 | Msa0470560:CDS | 30.0% |
!!! | GGAGAAAGTTAGTTTTGTTT+TGG | + | chr3_3:72660914-72660933 | Msa0470560:CDS | 30.0% |
AAAGAGTCTTCTTAAGTGAT+AGG | - | chr3_3:72660962-72660981 | None:intergenic | 30.0% | |
! | CAAAAAACCAAATTGGTGTT+TGG | - | chr3_3:72661060-72661079 | None:intergenic | 30.0% |
ATCACCTCTTTGATAAGAAA+TGG | - | chr3_3:72661474-72661493 | None:intergenic | 30.0% | |
TCTTCAATTGAGTGATAGAT+AGG | + | chr3_3:72661506-72661525 | Msa0470560:intron | 30.0% | |
!!! | GTAGTTCTTTTTTCGAACTT+AGG | - | chr3_3:72661651-72661670 | None:intergenic | 30.0% |
AGTTCGAAAAAAGAACTACA+CGG | + | chr3_3:72661652-72661671 | Msa0470560:intron | 30.0% | |
ATCAAATGACTGAATTGAGA+TGG | + | chr3_3:72661716-72661735 | Msa0470560:intron | 30.0% | |
TACTAATGTGCAATTTAGTG+TGG | + | chr3_3:72661770-72661789 | Msa0470560:intron | 30.0% | |
CCAAATATTGTGGAATTCAA+AGG | - | chr3_3:72663358-72663377 | None:intergenic | 30.0% | |
CCTTTGAATTCCACAATATT+TGG | + | chr3_3:72662039-72662058 | Msa0470560:intron | 30.0% | |
TGAATTCCACAATATTTGGT+TGG | + | chr3_3:72662043-72662062 | Msa0470560:intron | 30.0% | |
!!! | TCGGATTCTTTAGCTTTTAT+CGG | - | chr3_3:72662070-72662089 | None:intergenic | 30.0% |
CTTATACGTCGATATTAAAG+AGG | - | chr3_3:72662137-72662156 | None:intergenic | 30.0% | |
TATTAGGTAAAGGGAAACTT+GGG | - | chr3_3:72663197-72663216 | None:intergenic | 30.0% | |
ATATTAGGTAAAGGGAAACT+TGG | - | chr3_3:72663196-72663215 | None:intergenic | 30.0% | |
GACAGATTAGGTCAAATATT+AGG | - | chr3_3:72662224-72662243 | None:intergenic | 30.0% | |
! | GAACTTGCTTATATCTTGAA+AGG | + | chr3_3:72662244-72662263 | Msa0470560:intron | 30.0% |
! | ATCTAAAACTGATTGGAAGA+CGG | + | chr3_3:72662362-72662381 | Msa0470560:intron | 30.0% |
! | TTTTATCACGGATTCAATCA+TGG | - | chr3_3:72662743-72662762 | None:intergenic | 30.0% |
! | GAACTTGCTTATATCTTGAA+AGG | - | chr3_3:72662244-72662263 | None:intergenic | 30.0% |
ATAAGCAAGTTCTACAGTTT+AGG | + | chr3_3:72663169-72663188 | Msa0470560:intron | 30.0% | |
ATATTAGGTAAAGGGAAACT+TGG | + | chr3_3:72663196-72663215 | Msa0470560:intron | 30.0% | |
TATTAGGTAAAGGGAAACTT+GGG | + | chr3_3:72663197-72663216 | Msa0470560:intron | 30.0% | |
TGAATTCCACAATATTTGGT+TGG | - | chr3_3:72662043-72662062 | None:intergenic | 30.0% | |
CCTTTGAATTCCACAATATT+TGG | - | chr3_3:72662039-72662058 | None:intergenic | 30.0% | |
CCAAATATTGTGGAATTCAA+AGG | + | chr3_3:72663358-72663377 | Msa0470560:intron | 30.0% | |
ACTAACAAATCACATGCAAA+TGG | - | chr3_3:72663500-72663519 | None:intergenic | 30.0% | |
! | TCATTTGTTTAGTTTCACAG+GGG | + | chr3_3:72663557-72663576 | Msa0470560:intron | 30.0% |
! | AGTACTTGCTAACATTCTAT+TGG | + | chr3_3:72663652-72663671 | Msa0470560:intron | 30.0% |
! | GTACTTGCTAACATTCTATT+GGG | + | chr3_3:72663653-72663672 | Msa0470560:intron | 30.0% |
! | AAAATGGATCCCACTATTTT+GGG | - | chr3_3:72663988-72664007 | None:intergenic | 30.0% |
! | TAAAATGGATCCCACTATTT+TGG | - | chr3_3:72663989-72664008 | None:intergenic | 30.0% |
AGTGTATTGTGTATCACAAA+TGG | - | chr3_3:72664132-72664151 | None:intergenic | 30.0% | |
AAAAGTAAATGCGCATTTGA+GGG | - | chr3_3:72664289-72664308 | None:intergenic | 30.0% | |
! | TCTTTTGCTACAGAGTAATA+TGG | + | chr3_3:72664440-72664459 | Msa0470560:intron | 30.0% |
! | CATCCATGCAAATTTTATGT+AGG | + | chr3_3:72664508-72664527 | Msa0470560:intron | 30.0% |
AGTCCTACATAAAATTTGCA+TGG | - | chr3_3:72664514-72664533 | None:intergenic | 30.0% | |
! | TCATTTTCTTTGTATGCACA+TGG | + | chr3_3:72664807-72664826 | Msa0470560:intron | 30.0% |
TCATTTCAAAGTGCATTCTT+TGG | + | chr3_3:72664850-72664869 | Msa0470560:intron | 30.0% | |
CATTTCAAAGTGCATTCTTT+GGG | + | chr3_3:72664851-72664870 | Msa0470560:intron | 30.0% | |
! | TATACTCACTACATTTTTCC+AGG | + | chr3_3:72664878-72664897 | Msa0470560:intron | 30.0% |
ATATGAGAATGGTTGCATAA+AGG | + | chr3_3:72665115-72665134 | Msa0470560:CDS | 30.0% | |
!!! | TTTTTTTGCCTATTTAGGTC+TGG | + | chr3_3:72665264-72665283 | Msa0470560:intron | 30.0% |
AGTTCCAAAACATTGCATAA+TGG | + | chr3_3:72665305-72665324 | Msa0470560:CDS | 30.0% | |
!!! | GTTGTTTTTCAGTTTCAATG+TGG | - | chr3_3:72665680-72665699 | None:intergenic | 30.0% |
! | TTTTGATCTTAAGATCGACA+AGG | + | chr3_3:72665711-72665730 | Msa0470560:intron | 30.0% |
ACAATACTAAATTGAGACGA+TGG | + | chr3_3:72665757-72665776 | Msa0470560:intron | 30.0% | |
! | AGATGAGATTTTGGACATAT+TGG | + | chr3_3:72665780-72665799 | Msa0470560:intron | 30.0% |
AAAGAAAACATTGCAGTTCA+AGG | - | chr3_3:72666279-72666298 | None:intergenic | 30.0% | |
AGCCAAGGAAAACTTTATAT+TGG | + | chr3_3:72666446-72666465 | Msa0470560:CDS | 30.0% | |
CTAGTATAACTGAAAGAAGT+AGG | - | chr3_3:72666498-72666517 | None:intergenic | 30.0% | |
! | AGATACGAAAATACTTGTTG+AGG | - | chr3_3:72666535-72666554 | None:intergenic | 30.0% |
! | ATAATGGAAATCACATGCTT+TGG | + | chr3_3:72666600-72666619 | Msa0470560:intron | 30.0% |
! | GCATTTTCTTCAATTGAGTA+GGG | - | chr3_3:72666702-72666721 | None:intergenic | 30.0% |
! | TGCATTTTCTTCAATTGAGT+AGG | - | chr3_3:72666703-72666722 | None:intergenic | 30.0% |
! | TTTTCATTCAACAATATGGG+AGG | - | chr3_3:72666915-72666934 | None:intergenic | 30.0% |
!!! | ATATTTTCTTTTTGGGGCAT+TGG | + | chr3_3:72667486-72667505 | Msa0470560:three_prime_UTR | 30.0% |
AACTGTAAACTGTTCTGACA+TGG | + | chr3_3:72659693-72659712 | Msa0470560:exon | 35.0% | |
! | TTTAACGAGTTGAGTACAAG+CGG | - | chr3_3:72659860-72659879 | None:intergenic | 35.0% |
GTTAAATACTCTCCCAATCA+AGG | + | chr3_3:72659874-72659893 | Msa0470560:CDS | 35.0% | |
! | CTGAGTAGATCGATGTTTTT+AGG | - | chr3_3:72659913-72659932 | None:intergenic | 35.0% |
! | TTTGAGATGATGATGAAGAG+TGG | - | chr3_3:72659957-72659976 | None:intergenic | 35.0% |
TGCTTGGATTATCAAGTGTT+TGG | + | chr3_3:72660221-72660240 | Msa0470560:CDS | 35.0% | |
TTGGATTATCAAGTGTTTGG+AGG | + | chr3_3:72660224-72660243 | Msa0470560:CDS | 35.0% | |
TGGATTATCAAGTGTTTGGA+GGG | + | chr3_3:72660225-72660244 | Msa0470560:CDS | 35.0% | |
! | ATGAATGAGGTTTTCAGAGA+GGG | + | chr3_3:72660249-72660268 | Msa0470560:CDS | 35.0% |
!!! | GATAGGGTTTTGGAGAAATT+TGG | + | chr3_3:72660384-72660403 | Msa0470560:CDS | 35.0% |
!! | ATTTGGTGGATTGATGAATG+GGG | + | chr3_3:72660401-72660420 | Msa0470560:CDS | 35.0% |
GGTTTGGATTTGGATAAAGA+TGG | + | chr3_3:72660426-72660445 | Msa0470560:CDS | 35.0% | |
! | AGCTGTGATTGCTTTGAATT+TGG | + | chr3_3:72660488-72660507 | Msa0470560:CDS | 35.0% |
! | GTGATTGCTTTGAATTTGGA+AGG | + | chr3_3:72660492-72660511 | Msa0470560:CDS | 35.0% |
! | TGCTTTGAATTTGGAAGGTT+TGG | + | chr3_3:72660497-72660516 | Msa0470560:CDS | 35.0% |
!!! | TGTTTCTGTTTTGATGAGCT+TGG | + | chr3_3:72660543-72660562 | Msa0470560:CDS | 35.0% |
AAGATTATGGATCAGGTTTC+TGG | + | chr3_3:72660609-72660628 | Msa0470560:CDS | 35.0% | |
ATCACACGAATCAATGTGTA+CGG | + | chr3_3:72660650-72660669 | Msa0470560:CDS | 35.0% | |
ATCAATGTGTACGGAATGTT+TGG | + | chr3_3:72660659-72660678 | Msa0470560:CDS | 35.0% | |
CTAACAAAAAGCTCATTCTC+TGG | - | chr3_3:72660687-72660706 | None:intergenic | 35.0% | |
AAAACTTAGACAAAACCTCG+GGG | - | chr3_3:72660710-72660729 | None:intergenic | 35.0% | |
TTATTGGAAACAAACTCCCT+CGG | + | chr3_3:72660829-72660848 | Msa0470560:CDS | 35.0% | |
!! | ACTACCTTTGAAATGAGTGA+AGG | + | chr3_3:72660852-72660871 | Msa0470560:CDS | 35.0% |
!! | CTACCTTTGAAATGAGTGAA+GGG | + | chr3_3:72660853-72660872 | Msa0470560:CDS | 35.0% |
AATCCCTTCACTCATTTCAA+AGG | - | chr3_3:72660859-72660878 | None:intergenic | 35.0% | |
! | TTTGAAATGAGTGAAGGGAT+TGG | + | chr3_3:72660858-72660877 | Msa0470560:CDS | 35.0% |
TTTGGCTAACAAATCCTGAA+TGG | - | chr3_3:72661042-72661061 | None:intergenic | 35.0% | |
TTGTTAGCCAAACACCAATT+TGG | + | chr3_3:72661050-72661069 | Msa0470560:CDS | 35.0% | |
ATTCGGAGCTTACAGTAAAT+AGG | + | chr3_3:72661084-72661103 | Msa0470560:CDS | 35.0% | |
ACAGTAAATAGGAACAACAC+AGG | + | chr3_3:72661095-72661114 | Msa0470560:CDS | 35.0% | |
ACAACTTGGCAAGAATTACA+GGG | - | chr3_3:72661124-72661143 | None:intergenic | 35.0% | |
ATCATTCCTTGAGATAAGCT+AGG | - | chr3_3:72661266-72661285 | None:intergenic | 35.0% | |
ATTGAGCTTAAAGATCTGCA+AGG | + | chr3_3:72661284-72661303 | Msa0470560:CDS | 35.0% | |
!! | TGTATCACTGGATTAGCTAT+AGG | + | chr3_3:72661317-72661336 | Msa0470560:CDS | 35.0% |
TCTTATCAAAGAGGTGATGT+AGG | + | chr3_3:72661476-72661495 | Msa0470560:intron | 35.0% | |
CTTATCAAAGAGGTGATGTA+GGG | + | chr3_3:72661477-72661496 | Msa0470560:intron | 35.0% | |
ATAGGCTTAAGGATCACTTA+AGG | + | chr3_3:72661540-72661559 | Msa0470560:intron | 35.0% | |
TTGATGTTAGCTGATGTGTT+GGG | - | chr3_3:72661701-72661720 | None:intergenic | 35.0% | |
TTTGATGTTAGCTGATGTGT+TGG | - | chr3_3:72661702-72661721 | None:intergenic | 35.0% | |
!!! | CGGATTCTTTAGCTTTTATC+GGG | - | chr3_3:72662069-72662088 | None:intergenic | 35.0% |
CATAAGCATATTTAGACCAG+TGG | + | chr3_3:72662157-72662176 | Msa0470560:intron | 35.0% | |
ATTTAGACCAGTGGAATTCT+CGG | + | chr3_3:72662166-72662185 | Msa0470560:intron | 35.0% | |
ATAAGCAAGTTCGACAGATT+AGG | - | chr3_3:72662236-72662255 | None:intergenic | 35.0% | |
!! | GCAATGGATTTTGGATTTGA+TGG | + | chr3_3:72662287-72662306 | Msa0470560:intron | 35.0% |
CAAAGGAAGATTCAATTGCT+TGG | - | chr3_3:72662718-72662737 | None:intergenic | 35.0% | |
!! | TCTTGAACTCTGAAACTGAT+TGG | - | chr3_3:72663050-72663069 | None:intergenic | 35.0% |
! | TGTGTATGTGACTATGGTTT+TGG | - | chr3_3:72663079-72663098 | None:intergenic | 35.0% |
!! | AGTGGATTTTGGATTTGATG+GGG | - | chr3_3:72663116-72663135 | None:intergenic | 35.0% |
!! | CAGTGGATTTTGGATTTGAT+GGG | - | chr3_3:72663117-72663136 | None:intergenic | 35.0% |
ATTTAGACCAGTGGAATTCT+CGG | - | chr3_3:72662166-72662185 | None:intergenic | 35.0% | |
ACAAGCATAATTTAGACCAG+TGG | - | chr3_3:72663248-72663267 | None:intergenic | 35.0% | |
CAGATTCTGCAACTTATATC+AGG | + | chr3_3:72663331-72663350 | Msa0470560:intron | 35.0% | |
! | CATTTGTTTAGTTTCACAGG+GGG | + | chr3_3:72663558-72663577 | Msa0470560:intron | 35.0% |
TTGATAAAACTGTCCGTGTA+TGG | + | chr3_3:72663601-72663620 | Msa0470560:CDS | 35.0% | |
!! | ATTTAGAAGTGTTACCTGCA+AGG | - | chr3_3:72663628-72663647 | None:intergenic | 35.0% |
!! | ATCAAAAGGTATCTGCTAAC+TGG | - | chr3_3:72663822-72663841 | None:intergenic | 35.0% |
TCGTGTGAATTTCAACCAAT+GGG | - | chr3_3:72663918-72663937 | None:intergenic | 35.0% | |
TTCGTGTGAATTTCAACCAA+TGG | - | chr3_3:72663919-72663938 | None:intergenic | 35.0% | |
TTGTGTTCTGCATAATTTGG+TGG | + | chr3_3:72663954-72663973 | Msa0470560:intron | 35.0% | |
TGTGTTCTGCATAATTTGGT+GGG | + | chr3_3:72663955-72663974 | Msa0470560:intron | 35.0% | |
! | AAATGGATCCCACTATTTTG+GGG | - | chr3_3:72663987-72664006 | None:intergenic | 35.0% |
GAAAAGTAAATGCGCATTTG+AGG | - | chr3_3:72664290-72664309 | None:intergenic | 35.0% | |
TCTCATTTACACACGTTTAG+AGG | + | chr3_3:72664536-72664555 | Msa0470560:CDS | 35.0% | |
AGGTCATGAGAATAAAGTCA+TGG | + | chr3_3:72664556-72664575 | Msa0470560:CDS | 35.0% | |
! | ATACATTCCTTGACTGCTTT+TGG | + | chr3_3:72664722-72664741 | Msa0470560:CDS | 35.0% |
AAGATTTCCAAAAGCAGTCA+AGG | - | chr3_3:72664732-72664751 | None:intergenic | 35.0% | |
TTTGGAAATCTTCTCTACAC+TGG | + | chr3_3:72664740-72664759 | Msa0470560:CDS | 35.0% | |
GAGATAGAACAATCAAAGCT+TGG | + | chr3_3:72664768-72664787 | Msa0470560:CDS | 35.0% | |
AATCAAAGCTTGGTCATTGA+AGG | + | chr3_3:72664778-72664797 | Msa0470560:CDS | 35.0% | |
ACTTTGATGTACACAATGGA+TGG | + | chr3_3:72664906-72664925 | Msa0470560:CDS | 35.0% | |
GATCATTAAGACTCCACAAT+CGG | - | chr3_3:72665004-72665023 | None:intergenic | 35.0% | |
TCATTTCTCCAGACCTAAAT+AGG | - | chr3_3:72665275-72665294 | None:intergenic | 35.0% | |
!!! | TATGCAATGTTTTGGAACTC+AGG | - | chr3_3:72665304-72665323 | None:intergenic | 35.0% |
!! | ATTTTTGCTATGAGTCTGCA+GGG | + | chr3_3:72665332-72665351 | Msa0470560:CDS | 35.0% |
TATCAACATGGTTGTGAACA+TGG | - | chr3_3:72665547-72665566 | None:intergenic | 35.0% | |
GACATGAATATGTTTACAGC+TGG | + | chr3_3:72665868-72665887 | Msa0470560:intron | 35.0% | |
! | CAGATTTTGTAGCAGAATAG+CGG | + | chr3_3:72665926-72665945 | Msa0470560:intron | 35.0% |
CACAATCTATCAAGGAAGAT+GGG | + | chr3_3:72665949-72665968 | Msa0470560:intron | 35.0% | |
AAATCCTGATAACTCCAACA+TGG | - | chr3_3:72665982-72666001 | None:intergenic | 35.0% | |
ATATGGTGACAAGTCTATCA+AGG | + | chr3_3:72666469-72666488 | Msa0470560:CDS | 35.0% | |
TGATCATCCACATAGGAATT+AGG | - | chr3_3:72666753-72666772 | None:intergenic | 35.0% | |
GGTCAGATGTTAATATTTCC+TGG | - | chr3_3:72666777-72666796 | None:intergenic | 35.0% | |
AATAAGGCAGGTTGTCAAAT+AGG | - | chr3_3:72666798-72666817 | None:intergenic | 35.0% | |
ATAAAACACGAGAATAAGGC+AGG | - | chr3_3:72666810-72666829 | None:intergenic | 35.0% | |
AATTGAAGCTTGTCACACAT+TGG | - | chr3_3:72666841-72666860 | None:intergenic | 35.0% | |
! | CCATTGGTAGAATATTTCTG+TGG | - | chr3_3:72667045-72667064 | None:intergenic | 35.0% |
CCACAGAAATATTCTACCAA+TGG | + | chr3_3:72667042-72667061 | Msa0470560:intron | 35.0% | |
TGCTGTATATATACGAAGCT+CGG | + | chr3_3:72667368-72667387 | Msa0470560:three_prime_UTR | 35.0% | |
! | TGGATTGGATTATCTACATC+TGG | - | chr3_3:72667427-72667446 | None:intergenic | 35.0% |
! | TGTAGAGGCATAATTTGGAT+TGG | - | chr3_3:72667442-72667461 | None:intergenic | 35.0% |
AATCCAAATTATGCCTCTAC+AGG | + | chr3_3:72667441-72667460 | Msa0470560:three_prime_UTR | 35.0% | |
ATCCAAATTATGCCTCTACA+GGG | + | chr3_3:72667442-72667461 | Msa0470560:three_prime_UTR | 35.0% | |
TGTAAACTGTTCTGACATGG+AGG | + | chr3_3:72659696-72659715 | Msa0470560:exon | 40.0% | |
!!! | CGTAGTTTTGAAGACACACT+GGG | - | chr3_3:72659735-72659754 | None:intergenic | 40.0% |
!!! | TCGTAGTTTTGAAGACACAC+TGG | - | chr3_3:72659736-72659755 | None:intergenic | 40.0% |
CGAATTGTGTTTGGAAATCG+CGG | - | chr3_3:72659832-72659851 | None:intergenic | 40.0% | |
! | TTAACGAGTTGAGTACAAGC+GGG | - | chr3_3:72659859-72659878 | None:intergenic | 40.0% |
!! | ATGAAGAGTGGTGTTGTTGT+TGG | - | chr3_3:72659945-72659964 | None:intergenic | 40.0% |
CTCATCAGACCAGAATTTAG+AGG | - | chr3_3:72660016-72660035 | None:intergenic | 40.0% | |
! | TCTAAAGGTAGGGTTTGCTT+TGG | + | chr3_3:72660120-72660139 | Msa0470560:CDS | 40.0% |
!! | TTGCTTTGGAGTTAACCGTA+CGG | + | chr3_3:72660134-72660153 | Msa0470560:CDS | 40.0% |
!! | TCCGATTGTTACTTTGTCTC+CGG | + | chr3_3:72660167-72660186 | Msa0470560:CDS | 40.0% |
ACCGGAGACAAAGTAACAAT+CGG | - | chr3_3:72660171-72660190 | None:intergenic | 40.0% | |
GGATTATCAAGTGTTTGGAG+GGG | + | chr3_3:72660226-72660245 | Msa0470560:CDS | 40.0% | |
! | GATGAATGAGGTTTTCAGAG+AGG | + | chr3_3:72660248-72660267 | Msa0470560:CDS | 40.0% |
! | TGAATGAGGTTTTCAGAGAG+GGG | + | chr3_3:72660250-72660269 | Msa0470560:CDS | 40.0% |
! | TGATTCTAGAAGCTTCTGTG+AGG | + | chr3_3:72660280-72660299 | Msa0470560:CDS | 40.0% |
AGTAGGTTGTGTAGGGTTTA+TGG | + | chr3_3:72660306-72660325 | Msa0470560:CDS | 40.0% | |
! | TGTGTAGGGTTTATGGATTG+TGG | + | chr3_3:72660313-72660332 | Msa0470560:CDS | 40.0% |
!! | TGTTGGTGGTAGTCTGTATT+TGG | + | chr3_3:72660344-72660363 | Msa0470560:CDS | 40.0% |
!! | GTCTGTATTTGGTTTGTGAG+AGG | + | chr3_3:72660355-72660374 | Msa0470560:CDS | 40.0% |
TTTGTGAGAGGCAATGTGAT+AGG | + | chr3_3:72660367-72660386 | Msa0470560:CDS | 40.0% | |
TTGTGAGAGGCAATGTGATA+GGG | + | chr3_3:72660368-72660387 | Msa0470560:CDS | 40.0% | |
!!! | AGGGTTTTGGAGAAATTTGG+TGG | + | chr3_3:72660387-72660406 | Msa0470560:CDS | 40.0% |
!! | TTTGGTGGATTGATGAATGG+GGG | + | chr3_3:72660402-72660421 | Msa0470560:CDS | 40.0% |
! | AATTTGGAAGGTTTGGTTGC+TGG | + | chr3_3:72660504-72660523 | Msa0470560:CDS | 40.0% |
!!! | TTCTGTTTTGATGAGCTTGG+TGG | + | chr3_3:72660546-72660565 | Msa0470560:CDS | 40.0% |
!!! | TCTGTTTTGATGAGCTTGGT+GGG | + | chr3_3:72660547-72660566 | Msa0470560:CDS | 40.0% |
!! | TTTGAATGAGGTGTTGGTGA+TGG | + | chr3_3:72660581-72660600 | Msa0470560:CDS | 40.0% |
!! | TTGAATGAGGTGTTGGTGAT+GGG | + | chr3_3:72660582-72660601 | Msa0470560:CDS | 40.0% |
!! | GGTGATGGGAAGAAAGATTA+TGG | + | chr3_3:72660596-72660615 | Msa0470560:CDS | 40.0% |
GGGAAGAAAGATTATGGATC+AGG | + | chr3_3:72660602-72660621 | Msa0470560:CDS | 40.0% | |
! | ATTATGGATCAGGTTTCTGG+TGG | + | chr3_3:72660612-72660631 | Msa0470560:CDS | 40.0% |
GGGATTCGAGATATCCAATT+GGG | + | chr3_3:72660760-72660779 | Msa0470560:CDS | 40.0% | |
TCGAGATATCCAATTGGGTA+TGG | + | chr3_3:72660765-72660784 | Msa0470560:CDS | 40.0% | |
ATATCCAATTGGGTATGGCT+CGG | + | chr3_3:72660770-72660789 | Msa0470560:CDS | 40.0% | |
TCATTTCAAAGGTAGTCCGA+GGG | - | chr3_3:72660848-72660867 | None:intergenic | 40.0% | |
!! | AGGGATTGGTCTTGATGTTT+CGG | + | chr3_3:72660872-72660891 | Msa0470560:CDS | 40.0% |
! | GGCTAGTTATATTTCTTGGG+TGG | + | chr3_3:72660893-72660912 | Msa0470560:CDS | 40.0% |
! | ACAACATCTGGACGATTTTC+CGG | - | chr3_3:72661005-72661024 | None:intergenic | 40.0% |
TTCCTTACATCCACAACATC+TGG | - | chr3_3:72661017-72661036 | None:intergenic | 40.0% | |
GGATGTAAGGAAATCCATTC+AGG | + | chr3_3:72661025-72661044 | Msa0470560:CDS | 40.0% | |
CACAACTTGGCAAGAATTAC+AGG | - | chr3_3:72661125-72661144 | None:intergenic | 40.0% | |
GTTGCTTGAGGAAAGTTCTA+AGG | + | chr3_3:72661148-72661167 | Msa0470560:CDS | 40.0% | |
GGTCAACCTGATATTCTTCA+AGG | + | chr3_3:72661209-72661228 | Msa0470560:CDS | 40.0% | |
ACCTGATATTCTTCAAGGTG+CGG | + | chr3_3:72661214-72661233 | Msa0470560:CDS | 40.0% | |
TTCACTCCTAGCTTATCTCA+AGG | + | chr3_3:72661257-72661276 | Msa0470560:CDS | 40.0% | |
ATCCAGTGATACAACCAAGA+TGG | - | chr3_3:72661310-72661329 | None:intergenic | 40.0% | |
!! | ATCACTGGATTAGCTATAGG+AGG | + | chr3_3:72661320-72661339 | Msa0470560:CDS | 40.0% |
AAAGAGGTGATGTAGGGTTA+AGG | + | chr3_3:72661483-72661502 | Msa0470560:intron | 40.0% | |
GGATCACTTAAGGTCTTCTA+CGG | + | chr3_3:72661550-72661569 | Msa0470560:intron | 40.0% | |
GATCACTTAAGGTCTTCTAC+GGG | + | chr3_3:72661551-72661570 | Msa0470560:intron | 40.0% | |
!! | ATCACCATACAGCTTTGAGT+TGG | + | chr3_3:72661592-72661611 | Msa0470560:intron | 40.0% |
AACTACACGGAAATCACACA+AGG | + | chr3_3:72661665-72661684 | Msa0470560:intron | 40.0% | |
ACTACACGGAAATCACACAA+GGG | + | chr3_3:72661666-72661685 | Msa0470560:intron | 40.0% | |
TGATGTTAGCTGATGTGTTG+GGG | - | chr3_3:72661700-72661719 | None:intergenic | 40.0% | |
CTTAGTTAGCATATGCGTTG+AGG | + | chr3_3:72661823-72661842 | Msa0470560:intron | 40.0% | |
GGTTGCTTCACCTATTTCAT+CGG | + | chr3_3:72661844-72661863 | Msa0470560:intron | 40.0% | |
TGAAACACTGCCGATGAAAT+AGG | - | chr3_3:72661857-72661876 | None:intergenic | 40.0% | |
ACTCTCTCTGAATAACACTC+AGG | + | chr3_3:72661931-72661950 | Msa0470560:intron | 40.0% | |
! | TGATGGAACTTTGTGTTGGT+GGG | - | chr3_3:72661987-72662006 | None:intergenic | 40.0% |
! | CTTGTGATGGAACTTTGTGT+TGG | - | chr3_3:72661991-72662010 | None:intergenic | 40.0% |
CAACACAAAGTTCCATCACA+AGG | + | chr3_3:72661989-72662008 | Msa0470560:intron | 40.0% | |
TCCATTGCCAGACAGATATT+AGG | - | chr3_3:72662275-72662294 | None:intergenic | 40.0% | |
!! | ATCTGTCTGGCAATGGATTT+TGG | + | chr3_3:72662278-72662297 | Msa0470560:intron | 40.0% |
TAATAAAATGGCGGTGACGA+AGG | - | chr3_3:72662416-72662435 | None:intergenic | 40.0% | |
AAGAAAGCGGCTGAAAACAA+TGG | - | chr3_3:72662837-72662856 | None:intergenic | 40.0% | |
! | TGATGACTAGAAAGTGTGTC+CGG | - | chr3_3:72662871-72662890 | None:intergenic | 40.0% |
GTGTAGCAAGGGAAATAAAC+CGG | + | chr3_3:72662925-72662944 | Msa0470560:intron | 40.0% | |
!! | CTCTGAAACTGATTGGAAGA+TGG | - | chr3_3:72663043-72663062 | None:intergenic | 40.0% |
!!! | GTATGTGACTATGGTTTTGG+TGG | - | chr3_3:72663076-72663095 | None:intergenic | 40.0% |
!! | GCAGTGGATTTTGGATTTGA+TGG | - | chr3_3:72663118-72663137 | None:intergenic | 40.0% |
!! | ATGTGTCTAGCAGTGGATTT+TGG | - | chr3_3:72663127-72663146 | None:intergenic | 40.0% |
TCCACTGCTAGACACATATT+AGG | + | chr3_3:72663130-72663149 | Msa0470560:intron | 40.0% | |
ATCAGGCCAACCAAATATTG+TGG | + | chr3_3:72663348-72663367 | Msa0470560:intron | 40.0% | |
GGTGCTAAGCACTTATCAAA+AGG | - | chr3_3:72663836-72663855 | None:intergenic | 40.0% | |
CTCACTAATACCCTTCTTTC+AGG | + | chr3_3:72663885-72663904 | Msa0470560:intron | 40.0% | |
TACTAATCCTGCATAGCTGA+AGG | - | chr3_3:72664316-72664335 | None:intergenic | 40.0% | |
TGCTCATACCATTTCCTCAA+GGG | - | chr3_3:72664680-72664699 | None:intergenic | 40.0% | |
AATGGTATGAGCAGAAGGAT+TGG | + | chr3_3:72664687-72664706 | Msa0470560:CDS | 40.0% | |
AATCTTCTCTACACTGGAAG+TGG | + | chr3_3:72664746-72664765 | Msa0470560:CDS | 40.0% | |
! | CTCACTACATTTTTCCAGGA+CGG | + | chr3_3:72664882-72664901 | Msa0470560:intron | 40.0% |
CGGAACTTTGATGTACACAA+TGG | + | chr3_3:72664902-72664921 | Msa0470560:CDS | 40.0% | |
GTGTGGAAACTACAGATTTG+TGG | - | chr3_3:72664932-72664951 | None:intergenic | 40.0% | |
CTCATCACATACTGAAAGTG+TGG | - | chr3_3:72664949-72664968 | None:intergenic | 40.0% | |
CACACTTTCAGTATGTGATG+AGG | + | chr3_3:72664947-72664966 | Msa0470560:CDS | 40.0% | |
TGTGATGAGGTTCTTTACAG+TGG | + | chr3_3:72664960-72664979 | Msa0470560:CDS | 40.0% | |
AGGTTCTTTACAGTGGTAGT+TGG | + | chr3_3:72664967-72664986 | Msa0470560:CDS | 40.0% | |
GGTTCTTTACAGTGGTAGTT+GGG | + | chr3_3:72664968-72664987 | Msa0470560:CDS | 40.0% | |
ATTAAGACTCCACAATCGGA+CGG | - | chr3_3:72665000-72665019 | None:intergenic | 40.0% | |
TCTTAATGATCATAGCCCGT+TGG | + | chr3_3:72665013-72665032 | Msa0470560:CDS | 40.0% | |
GACTCGATATAATCATCTCC+TGG | + | chr3_3:72665216-72665235 | Msa0470560:intron | 40.0% | |
AATCATCTCCTGGCATTGTT+TGG | + | chr3_3:72665226-72665245 | Msa0470560:intron | 40.0% | |
AGATGTTACCAAACAATGCC+AGG | - | chr3_3:72665237-72665256 | None:intergenic | 40.0% | |
! | GGCACCATTATGCAATGTTT+TGG | - | chr3_3:72665312-72665331 | None:intergenic | 40.0% |
CTGCAGACTCATAGCAAAAA+TGG | - | chr3_3:72665333-72665352 | None:intergenic | 40.0% | |
!! | CATTTTTGCTATGAGTCTGC+AGG | + | chr3_3:72665331-72665350 | Msa0470560:CDS | 40.0% |
!! | CAGGGAAAATGGCTTTATAC+AGG | + | chr3_3:72665350-72665369 | Msa0470560:CDS | 40.0% |
!! | GGAAAATGGCTTTATACAGG+AGG | + | chr3_3:72665353-72665372 | Msa0470560:CDS | 40.0% |
!! | AATGGCTTTATACAGGAGGT+TGG | + | chr3_3:72665357-72665376 | Msa0470560:CDS | 40.0% |
!! | ATGGCTTTATACAGGAGGTT+GGG | + | chr3_3:72665358-72665377 | Msa0470560:CDS | 40.0% |
! | AGACGATGGAGATGAGATTT+TGG | + | chr3_3:72665771-72665790 | Msa0470560:intron | 40.0% |
TGTCTTATCTCTTCTCTCTC+AGG | - | chr3_3:72665852-72665871 | None:intergenic | 40.0% | |
AATAGCGGCACAATCTATCA+AGG | + | chr3_3:72665941-72665960 | Msa0470560:intron | 40.0% | |
GCACAATCTATCAAGGAAGA+TGG | + | chr3_3:72665948-72665967 | Msa0470560:intron | 40.0% | |
AATGGATCCAAATGCGTTGA+CGG | - | chr3_3:72666393-72666412 | None:intergenic | 40.0% | |
TATAGCTGTCACAACAGAAC+TGG | - | chr3_3:72666420-72666439 | None:intergenic | 40.0% | |
ACAGCTATATTATGCAGCCA+AGG | + | chr3_3:72666431-72666450 | Msa0470560:CDS | 40.0% | |
ACACAAACTTTCCCATGTCT+TGG | + | chr3_3:72666625-72666644 | Msa0470560:intron | 40.0% | |
CTTTCCATTGACCAAGACAT+GGG | - | chr3_3:72666639-72666658 | None:intergenic | 40.0% | |
TCTTTCCATTGACCAAGACA+TGG | - | chr3_3:72666640-72666659 | None:intergenic | 40.0% | |
AATAACATCTACACGGCTCT+AGG | - | chr3_3:72666671-72666690 | None:intergenic | 40.0% | |
! | AGTGTATGTTCAGCTTTGTG+AGG | + | chr3_3:72667016-72667035 | Msa0470560:intron | 40.0% |
ATTCTATCAACTCTCTGTCG+AGG | - | chr3_3:72667140-72667159 | None:intergenic | 40.0% | |
TTGAGAATCAACCAGAACTC+TGG | - | chr3_3:72667397-72667416 | None:intergenic | 40.0% | |
!!! | TTTTTGGGGCATTGGTTCTT+GGG | + | chr3_3:72667494-72667513 | Msa0470560:three_prime_UTR | 40.0% |
TTCTGACATGGAGGAGTTAC+CGG | + | chr3_3:72659705-72659724 | Msa0470560:exon | 45.0% | |
ATTCCACGAGTACTCTCATG+CGG | + | chr3_3:72659769-72659788 | Msa0470560:CDS | 45.0% | |
GACAAGCTTCACAAACAGTG+TGG | - | chr3_3:72659795-72659814 | None:intergenic | 45.0% | |
ATTGTGTTTGGAAATCGCGG+TGG | - | chr3_3:72659829-72659848 | None:intergenic | 45.0% | |
! | TAACGAGTTGAGTACAAGCG+GGG | - | chr3_3:72659858-72659877 | None:intergenic | 45.0% |
AGAGAAGAAGGGCCTTGATT+GGG | - | chr3_3:72659889-72659908 | None:intergenic | 45.0% | |
AAGAGAAGAAGGGCCTTGAT+TGG | - | chr3_3:72659890-72659909 | None:intergenic | 45.0% | |
!! | AGAGTGGTGTTGTTGTTGGA+GGG | - | chr3_3:72659941-72659960 | None:intergenic | 45.0% |
!! | AAGAGTGGTGTTGTTGTTGG+AGG | - | chr3_3:72659942-72659961 | None:intergenic | 45.0% |
! | CTGATGAGTTTTACGCTGCT+TGG | + | chr3_3:72660028-72660047 | Msa0470560:CDS | 45.0% |
! | TGAGTTTTACGCTGCTTGGA+AGG | + | chr3_3:72660032-72660051 | Msa0470560:CDS | 45.0% |
TTTACGCTGCTTGGAAGGAT+TGG | + | chr3_3:72660037-72660056 | Msa0470560:CDS | 45.0% | |
! | GGTTTATGGATTGTGGAGTG+AGG | + | chr3_3:72660320-72660339 | Msa0470560:CDS | 45.0% |
! | GAGGCAATGTGATAGGGTTT+TGG | + | chr3_3:72660374-72660393 | Msa0470560:CDS | 45.0% |
!!! | CTGTTTTGATGAGCTTGGTG+GGG | + | chr3_3:72660548-72660567 | Msa0470560:CDS | 45.0% |
AGGGTTGTTAATCCAGAGAG+CGG | + | chr3_3:72660738-72660757 | Msa0470560:CDS | 45.0% | |
GGGGATTCGAGATATCCAAT+TGG | + | chr3_3:72660759-72660778 | Msa0470560:CDS | 45.0% | |
! | GTGTTACTGCGGGTTCTTAT+TGG | + | chr3_3:72660813-72660832 | Msa0470560:CDS | 45.0% |
CTCATTTCAAAGGTAGTCCG+AGG | - | chr3_3:72660849-72660868 | None:intergenic | 45.0% | |
GAAGACTCTTTGCAAGTGTC+TGG | + | chr3_3:72660971-72660990 | Msa0470560:CDS | 45.0% | |
CAAGTGTCTGGACATCAATC+CGG | + | chr3_3:72660983-72661002 | Msa0470560:CDS | 45.0% | |
GGAAAATCGTCCAGATGTTG+TGG | + | chr3_3:72661004-72661023 | Msa0470560:CDS | 45.0% | |
GTCCAGATGTTGTGGATGTA+AGG | + | chr3_3:72661012-72661031 | Msa0470560:CDS | 45.0% | |
CTCAAGCAACTGACACAACT+TGG | - | chr3_3:72661138-72661157 | None:intergenic | 45.0% | |
CAAGTTGTGTCAGTTGCTTG+AGG | + | chr3_3:72661136-72661155 | Msa0470560:CDS | 45.0% | |
TTGCAGGCAAAAGAAGATGG+TGG | + | chr3_3:72661188-72661207 | Msa0470560:CDS | 45.0% | |
TCCGCACCTTGAAGAATATC+AGG | - | chr3_3:72661218-72661237 | None:intergenic | 45.0% | |
GCTAGGAGTGAAGTCTTCAT+CGG | - | chr3_3:72661249-72661268 | None:intergenic | 45.0% | |
AAAGATCTGCAAGGCCATCT+TGG | + | chr3_3:72661293-72661312 | Msa0470560:CDS | 45.0% | |
GTCTTCTACGGGTCTTCAAT+TGG | + | chr3_3:72661562-72661581 | Msa0470560:intron | 45.0% | |
CCATCCAACTCAAAGCTGTA+TGG | - | chr3_3:72661599-72661618 | None:intergenic | 45.0% | |
!! | CCATACAGCTTTGAGTTGGA+TGG | + | chr3_3:72661596-72661615 | Msa0470560:intron | 45.0% |
CTACACGGAAATCACACAAG+GGG | + | chr3_3:72661667-72661686 | Msa0470560:intron | 45.0% | |
! | GATGGAACTTTGTGTTGGTG+GGG | - | chr3_3:72661986-72662005 | None:intergenic | 45.0% |
! | GTGATGGAACTTTGTGTTGG+TGG | - | chr3_3:72661988-72662007 | None:intergenic | 45.0% |
CTTAAGTGTGCACCTTGTGA+TGG | - | chr3_3:72663396-72663415 | None:intergenic | 45.0% | |
ATCGGGCCAACCAAATATTG+TGG | - | chr3_3:72662052-72662071 | None:intergenic | 45.0% | |
! | TTTTGCACCGAGAATTCCAC+TGG | - | chr3_3:72663229-72663248 | None:intergenic | 45.0% |
GGGTTTGCCTAATATCTGTC+TGG | + | chr3_3:72662265-72662284 | Msa0470560:intron | 45.0% | |
GCCTAATATCTGTCTGGCAA+TGG | + | chr3_3:72662271-72662290 | Msa0470560:intron | 45.0% | |
!! | AATGGGTTGTCTGTGTAGCA+AGG | + | chr3_3:72662913-72662932 | Msa0470560:intron | 45.0% |
! | ATGGGTTGTCTGTGTAGCAA+GGG | + | chr3_3:72662914-72662933 | Msa0470560:intron | 45.0% |
GGGAAATAAACCGGTTGTAG+AGG | + | chr3_3:72662934-72662953 | Msa0470560:intron | 45.0% | |
TATATGTGGCGGTTGATCCA+TGG | - | chr3_3:72662970-72662989 | None:intergenic | 45.0% | |
GAAGCGTGTGTATGTGACTA+TGG | - | chr3_3:72663085-72663104 | None:intergenic | 45.0% | |
GCCTAATATGTGTCTAGCAG+TGG | - | chr3_3:72663134-72663153 | None:intergenic | 45.0% | |
! | TTTTGCACCGAGAATTCCAC+TGG | + | chr3_3:72663229-72663248 | Msa0470560:intron | 45.0% |
!! | GGAATTCAAAGGTGCTCAAG+AGG | + | chr3_3:72663369-72663388 | Msa0470560:intron | 45.0% |
CTTAAGTGTGCACCTTGTGA+AGG | + | chr3_3:72663396-72663415 | Msa0470560:intron | 45.0% | |
CAGCACAAAGTTCCTTCACA+AGG | - | chr3_3:72663411-72663430 | None:intergenic | 45.0% | |
CTTGTGAAGGAACTTTGTGC+TGG | + | chr3_3:72663409-72663428 | Msa0470560:intron | 45.0% | |
! | TGAAGGAACTTTGTGCTGGT+GGG | + | chr3_3:72663413-72663432 | Msa0470560:intron | 45.0% |
GCTCTCTCTGAATAACACTC+AGG | - | chr3_3:72663469-72663488 | None:intergenic | 45.0% | |
TTACCTGCAAGGACCATACA+CGG | - | chr3_3:72663617-72663636 | None:intergenic | 45.0% | |
!! | CTGCTAACTGGTGTCATGTT+GGG | - | chr3_3:72663810-72663829 | None:intergenic | 45.0% |
!! | TCTGCTAACTGGTGTCATGT+TGG | - | chr3_3:72663811-72663830 | None:intergenic | 45.0% |
!! | GATCCCACTATTTTGGGGAT+GGG | - | chr3_3:72663982-72664001 | None:intergenic | 45.0% |
AACAAGTGTGTTTGCTCGAG+TGG | + | chr3_3:72664203-72664222 | Msa0470560:intron | 45.0% | |
ACAAGTGTGTTTGCTCGAGT+GGG | + | chr3_3:72664204-72664223 | Msa0470560:intron | 45.0% | |
AATCCTGCATAGCTGAAGGT+GGG | - | chr3_3:72664312-72664331 | None:intergenic | 45.0% | |
TAATCCTGCATAGCTGAAGG+TGG | - | chr3_3:72664313-72664332 | None:intergenic | 45.0% | |
ACTCGTCAACAGAATAGCTG+AGG | - | chr3_3:72664486-72664505 | None:intergenic | 45.0% | |
CTCAAGGGATCTTGACTAAG+AGG | - | chr3_3:72664665-72664684 | None:intergenic | 45.0% | |
CTCTTAGTCAAGATCCCTTG+AGG | + | chr3_3:72664663-72664682 | Msa0470560:CDS | 45.0% | |
GTCAAGATCCCTTGAGGAAA+TGG | + | chr3_3:72664669-72664688 | Msa0470560:CDS | 45.0% | |
CTGCTCATACCATTTCCTCA+AGG | - | chr3_3:72664681-72664700 | None:intergenic | 45.0% | |
GAGGAAATGGTATGAGCAGA+AGG | + | chr3_3:72664682-72664701 | Msa0470560:CDS | 45.0% | |
TGTACATCAAAGTTCCGTCC+TGG | - | chr3_3:72664899-72664918 | None:intergenic | 45.0% | |
CTTTACAGTGGTAGTTGGGA+TGG | + | chr3_3:72664972-72664991 | Msa0470560:CDS | 45.0% | |
TAATGATCATAGCCCGTTGG+CGG | + | chr3_3:72665016-72665035 | Msa0470560:CDS | 45.0% | |
AGGATAGACTTCATCTCTCC+AGG | - | chr3_3:72665059-72665078 | None:intergenic | 45.0% | |
TGGAGAGATGAAGTCTATCC+TGG | + | chr3_3:72665058-72665077 | Msa0470560:CDS | 45.0% | |
TCCTGGCTATTACTGCTAGT+AGG | + | chr3_3:72665075-72665094 | Msa0470560:CDS | 45.0% | |
CCTGGCTATTACTGCTAGTA+GGG | + | chr3_3:72665076-72665095 | Msa0470560:CDS | 45.0% | |
TACTGCTAGTAGGGATTTGC+TGG | + | chr3_3:72665085-72665104 | Msa0470560:CDS | 45.0% | |
CTGGTTGCAGCATATGAGAA+TGG | + | chr3_3:72665104-72665123 | Msa0470560:CDS | 45.0% | |
CTATGAGTCTGCAGGGAAAA+TGG | + | chr3_3:72665339-72665358 | Msa0470560:CDS | 45.0% | |
CGACAAGGTCAAATCACATC+TGG | + | chr3_3:72665726-72665745 | Msa0470560:intron | 45.0% | |
CTGATAACTCCAACATGGAG+TGG | - | chr3_3:72665977-72665996 | None:intergenic | 45.0% | |
CACTCCATGTTGGAGTTATC+AGG | + | chr3_3:72665975-72665994 | Msa0470560:intron | 45.0% | |
CACAACAGAACTGGAAGGAA+TGG | - | chr3_3:72666411-72666430 | None:intergenic | 45.0% | |
CTTTCCCATGTCTTGGTCAA+TGG | + | chr3_3:72666632-72666651 | Msa0470560:intron | 45.0% | |
! | GAGGCATCCTAATTCCTATG+TGG | + | chr3_3:72666743-72666762 | Msa0470560:intron | 45.0% |
TCCTATGTGGATGATCAACC+AGG | + | chr3_3:72666756-72666775 | Msa0470560:intron | 45.0% | |
TCCTGGTTGATCATCCACAT+AGG | - | chr3_3:72666760-72666779 | None:intergenic | 45.0% | |
GCATAATGCTAGCTACTGCA+TGG | + | chr3_3:72666865-72666884 | Msa0470560:intron | 45.0% | |
! | CACCCTGTAGAGGCATAATT+TGG | - | chr3_3:72667447-72667466 | None:intergenic | 45.0% |
!!! | CTTTTTGGGGCATTGGTTCT+TGG | + | chr3_3:72667493-72667512 | Msa0470560:three_prime_UTR | 45.0% |
!!! | TTTTGGGGCATTGGTTCTTG+GGG | + | chr3_3:72667495-72667514 | Msa0470560:three_prime_UTR | 45.0% |
!!! | TTAATTTTTAAAAGAAAAAA+AGG | - | chr3_3:72664160-72664179 | None:intergenic | 5.0% |
!! | GCATGAGAGTACTCGTGGAA+TGG | - | chr3_3:72659770-72659789 | None:intergenic | 50.0% |
TGTTTGGAAATCGCGGTGGA+AGG | - | chr3_3:72659825-72659844 | None:intergenic | 50.0% | |
TCACGACACCGTTTCCGTTA+CGG | + | chr3_3:72660068-72660087 | Msa0470560:CDS | 50.0% | |
TCGGAGCTAAACTCACCGTA+CGG | - | chr3_3:72660152-72660171 | None:intergenic | 50.0% | |
GTGTTTGGAGGGGATGAATG+AGG | + | chr3_3:72660236-72660255 | Msa0470560:CDS | 50.0% | |
! | GAGGTTTTCAGAGAGGGGTT+AGG | + | chr3_3:72660255-72660274 | Msa0470560:CDS | 50.0% |
AAGCTTCTGTGAGGCAGAGT+AGG | + | chr3_3:72660289-72660308 | Msa0470560:CDS | 50.0% | |
TGAGGCAGAGTAGGTTGTGT+AGG | + | chr3_3:72660298-72660317 | Msa0470560:CDS | 50.0% | |
GAGGCAGAGTAGGTTGTGTA+GGG | + | chr3_3:72660299-72660318 | Msa0470560:CDS | 50.0% | |
GGATTGTGGAGTGAGGTTGT+TGG | + | chr3_3:72660327-72660346 | Msa0470560:CDS | 50.0% | |
TTGTGGAGTGAGGTTGTTGG+TGG | + | chr3_3:72660330-72660349 | Msa0470560:CDS | 50.0% | |
ATTGATGAATGGGGGCGGTT+TGG | + | chr3_3:72660410-72660429 | Msa0470560:CDS | 50.0% | |
! | AGGTTTGGTTGCTGGCAGTT+TGG | + | chr3_3:72660512-72660531 | Msa0470560:CDS | 50.0% |
! | GGTTTGGTTGCTGGCAGTTT+GGG | + | chr3_3:72660513-72660532 | Msa0470560:CDS | 50.0% |
!! | GATCAGGTTTCTGGTGGTAC+AGG | + | chr3_3:72660618-72660637 | Msa0470560:CDS | 50.0% |
! | TGAGCTTTTTGTTAGCCCCG+AGG | + | chr3_3:72660692-72660711 | Msa0470560:CDS | 50.0% |
GGGTTGTTAATCCAGAGAGC+GGG | + | chr3_3:72660739-72660758 | Msa0470560:CDS | 50.0% | |
GGTTGTTAATCCAGAGAGCG+GGG | + | chr3_3:72660740-72660759 | Msa0470560:CDS | 50.0% | |
ACATCCGAGCCATACCCAAT+TGG | - | chr3_3:72660777-72660796 | None:intergenic | 50.0% | |
! | TTGGGTATGGCTCGGATGTA+TGG | + | chr3_3:72660778-72660797 | Msa0470560:CDS | 50.0% |
!! | CGTTGGCTTGTGTGTTACTG+CGG | + | chr3_3:72660802-72660821 | Msa0470560:CDS | 50.0% |
!! | GTTGGCTTGTGTGTTACTGC+GGG | + | chr3_3:72660803-72660822 | Msa0470560:CDS | 50.0% |
TCTAAGGAGCCGAGAGAACA+CGG | + | chr3_3:72661164-72661183 | Msa0470560:CDS | 50.0% | |
GGGTTGCAGGCAAAAGAAGA+TGG | + | chr3_3:72661185-72661204 | Msa0470560:CDS | 50.0% | |
GGCCATCTTGGTTGTATCAC+TGG | + | chr3_3:72661305-72661324 | Msa0470560:CDS | 50.0% | |
CATCGGCAGTGTTTCACTTG+TGG | + | chr3_3:72661861-72661880 | Msa0470560:intron | 50.0% | |
TGTGTGTGTGACTGTGGTTC+TGG | + | chr3_3:72662326-72662345 | Msa0470560:intron | 50.0% | |
TAAAATGGCGGTGACGAAGG+TGG | - | chr3_3:72662413-72662432 | None:intergenic | 50.0% | |
CGGATTCAATCATGGCGCAA+AGG | - | chr3_3:72662735-72662754 | None:intergenic | 50.0% | |
! | AGGGCACTAACCTCTACAAC+CGG | - | chr3_3:72662947-72662966 | None:intergenic | 50.0% |
GGATCAACCGCCACATATAG+TGG | + | chr3_3:72662971-72662990 | Msa0470560:intron | 50.0% | |
ACCGCCACATATAGTGGTGA+TGG | + | chr3_3:72662977-72662996 | Msa0470560:intron | 50.0% | |
GCCATCACCACTATATGTGG+CGG | - | chr3_3:72662981-72663000 | None:intergenic | 50.0% | |
!! | GCCACATATAGTGGTGATGG+CGG | + | chr3_3:72662980-72662999 | Msa0470560:intron | 50.0% |
GTGAAGGAACTTTGTGCTGG+TGG | + | chr3_3:72663412-72663431 | Msa0470560:intron | 50.0% | |
! | GAAGGAACTTTGTGCTGGTG+GGG | + | chr3_3:72663414-72663433 | Msa0470560:intron | 50.0% |
!! | GGGAAAGCGTCCTGAAAGAA+GGG | - | chr3_3:72663898-72663917 | None:intergenic | 50.0% |
!! | TGGGAAAGCGTCCTGAAAGA+AGG | - | chr3_3:72663899-72663918 | None:intergenic | 50.0% |
CTTTCAGGACGCTTTCCCAT+TGG | + | chr3_3:72663900-72663919 | Msa0470560:intron | 50.0% | |
GGACCCATCCCCAAAATAGT+GGG | + | chr3_3:72663976-72663995 | Msa0470560:intron | 50.0% | |
!! | GGATCCCACTATTTTGGGGA+TGG | - | chr3_3:72663983-72664002 | None:intergenic | 50.0% |
TTTCCCACCTTCAGCTATGC+AGG | + | chr3_3:72664306-72664325 | Msa0470560:intron | 50.0% | |
! | TGGTGGGGGCATATTTGTCT+GGG | + | chr3_3:72664628-72664647 | Msa0470560:CDS | 50.0% |
! | CAGAAGGATTGGCGCTTTAG+TGG | + | chr3_3:72664698-72664717 | Msa0470560:CDS | 50.0% |
CCCTACTAGCAGTAATAGCC+AGG | - | chr3_3:72665079-72665098 | None:intergenic | 50.0% | |
AGATGGGTACCACTCCATGT+TGG | + | chr3_3:72665965-72665984 | Msa0470560:intron | 50.0% | |
GAACTGACCGTCAACGCATT+TGG | + | chr3_3:72666383-72666402 | Msa0470560:CDS | 50.0% | |
GCTGTCACAACAGAACTGGA+AGG | - | chr3_3:72666416-72666435 | None:intergenic | 50.0% | |
GTGTACAGAACACCCTGTAG+AGG | - | chr3_3:72667457-72667476 | None:intergenic | 50.0% | |
TGAAGACACACTGGGCACTC+CGG | - | chr3_3:72659727-72659746 | None:intergenic | 55.0% | |
GCGGGGCAACGAATTGTGTT+TGG | - | chr3_3:72659841-72659860 | None:intergenic | 55.0% | |
!! | GTAACGGAAACGGTGTCGTG+AGG | - | chr3_3:72660069-72660088 | None:intergenic | 55.0% |
ACCGTTTCCGTTACGGAGGA+CGG | + | chr3_3:72660075-72660094 | Msa0470560:CDS | 55.0% | |
! | ACCGTCCTCCGTAACGGAAA+CGG | - | chr3_3:72660079-72660098 | None:intergenic | 55.0% |
ACCAACACCGTCCTCCGTAA+CGG | - | chr3_3:72660085-72660104 | None:intergenic | 55.0% | |
!! | TTACGGAGGACGGTGTTGGT+AGG | + | chr3_3:72660085-72660104 | Msa0470560:CDS | 55.0% |
!! | GGTGGATTGATGAATGGGGG+CGG | + | chr3_3:72660405-72660424 | Msa0470560:CDS | 55.0% |
! | GAATGGGGGCGGTTTGGATT+TGG | + | chr3_3:72660416-72660435 | Msa0470560:CDS | 55.0% |
TATCTCGAATCCCCGCTCTC+TGG | - | chr3_3:72660753-72660772 | None:intergenic | 55.0% | |
! | TGGCTCGGATGTATGGTCGT+TGG | + | chr3_3:72660785-72660804 | Msa0470560:CDS | 55.0% |
CTAAGGAGCCGAGAGAACAC+GGG | + | chr3_3:72661165-72661184 | Msa0470560:CDS | 55.0% | |
GAAGCGTGTGTGTGTGACTG+TGG | + | chr3_3:72662320-72662339 | Msa0470560:intron | 55.0% | |
!! | GTGTGTGACTGTGGTTCTGG+TGG | + | chr3_3:72662329-72662348 | Msa0470560:intron | 55.0% |
GTAGAGGTTAGTGCCCTCCA+TGG | + | chr3_3:72662950-72662969 | Msa0470560:intron | 55.0% | |
TGTGGCGGTTGATCCATGGA+GGG | - | chr3_3:72662966-72662985 | None:intergenic | 55.0% | |
ATGTGGCGGTTGATCCATGG+AGG | - | chr3_3:72662967-72662986 | None:intergenic | 55.0% | |
GCCGCCATCACCACTATATG+TGG | - | chr3_3:72662984-72663003 | None:intergenic | 55.0% | |
!! | TATAGTGGTGATGGCGGCGA+CGG | + | chr3_3:72662986-72663005 | Msa0470560:intron | 55.0% |
GCGACGGTGGTAGTAGTTAC+AGG | + | chr3_3:72663002-72663021 | Msa0470560:intron | 55.0% | |
TGTCCGTGTATGGTCCTTGC+AGG | + | chr3_3:72663611-72663630 | Msa0470560:CDS | 55.0% | |
GGGACCCATCCCCAAAATAG+TGG | + | chr3_3:72663975-72663994 | Msa0470560:intron | 55.0% | |
! | GTGGTGGGGGCATATTTGTC+TGG | + | chr3_3:72664627-72664646 | Msa0470560:CDS | 55.0% |
! | GGTGGGGGCATATTTGTCTG+GGG | + | chr3_3:72664629-72664648 | Msa0470560:CDS | 55.0% |
! | GTGGGGGCATATTTGTCTGG+GGG | + | chr3_3:72664630-72664649 | Msa0470560:CDS | 55.0% |
GTGCTAGGGGAAGATCTTCC+TGG | + | chr3_3:72665038-72665057 | Msa0470560:CDS | 55.0% | |
AAGCTCGGCTTCCAGAGTTC+TGG | + | chr3_3:72667383-72667402 | Msa0470560:three_prime_UTR | 55.0% | |
!! | TGGCCGCATGAGAGTACTCG+TGG | - | chr3_3:72659775-72659794 | None:intergenic | 60.0% |
CGACACCGTTTCCGTTACGG+AGG | + | chr3_3:72660071-72660090 | Msa0470560:CDS | 60.0% | |
TCCGTTACGGAGGACGGTGT+TGG | + | chr3_3:72660081-72660100 | Msa0470560:CDS | 60.0% | |
GCCTGCAACCCGTGTTCTCT+CGG | - | chr3_3:72661176-72661195 | None:intergenic | 60.0% | |
GGGATGGAACCGTCCGATTG+TGG | + | chr3_3:72664988-72665007 | Msa0470560:CDS | 60.0% | |
! | ATAGCCCGTTGGCGGTGCTA+GGG | + | chr3_3:72665024-72665043 | Msa0470560:CDS | 60.0% |
TCTTCCCCTAGCACCGCCAA+CGG | - | chr3_3:72665032-72665051 | None:intergenic | 60.0% | |
! | GCCGAGAGAACACGGGTTGC+AGG | + | chr3_3:72661172-72661191 | Msa0470560:CDS | 65.0% |
CATAGCCCGTTGGCGGTGCT+AGG | + | chr3_3:72665023-72665042 | Msa0470560:CDS | 65.0% | |
! | TAGCCCGTTGGCGGTGCTAG+GGG | + | chr3_3:72665025-72665044 | Msa0470560:CDS | 65.0% |
CTTCCCCTAGCACCGCCAAC+GGG | - | chr3_3:72665031-72665050 | None:intergenic | 65.0% | |
!! | AGTGGTGATGGCGGCGACGG+TGG | + | chr3_3:72662989-72663008 | Msa0470560:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 72659616 | 72667598 | 72659616 | ID=Msa0470560;Name=Msa0470560 |
chr3_3 | mRNA | 72659616 | 72667598 | 72659616 | ID=Msa0470560-mRNA-1;Parent=Msa0470560;Name=Msa0470560-mRNA-1;_AED=0.08;_eAED=0.08;_QI=96|1|1|1|0.83|0.71|7|299|822 |
chr3_3 | exon | 72659616 | 72661341 | 72659616 | ID=Msa0470560-mRNA-1:exon:18193;Parent=Msa0470560-mRNA-1 |
chr3_3 | exon | 72663577 | 72663632 | 72663577 | ID=Msa0470560-mRNA-1:exon:18194;Parent=Msa0470560-mRNA-1 |
chr3_3 | exon | 72664530 | 72664799 | 72664530 | ID=Msa0470560-mRNA-1:exon:18195;Parent=Msa0470560-mRNA-1 |
chr3_3 | exon | 72664900 | 72665136 | 72664900 | ID=Msa0470560-mRNA-1:exon:18196;Parent=Msa0470560-mRNA-1 |
chr3_3 | exon | 72665281 | 72665400 | 72665281 | ID=Msa0470560-mRNA-1:exon:18197;Parent=Msa0470560-mRNA-1 |
chr3_3 | exon | 72666362 | 72666517 | 72666362 | ID=Msa0470560-mRNA-1:exon:18198;Parent=Msa0470560-mRNA-1 |
chr3_3 | exon | 72667300 | 72667598 | 72667300 | ID=Msa0470560-mRNA-1:exon:18199;Parent=Msa0470560-mRNA-1 |
chr3_3 | five_prime_UTR | 72659616 | 72659711 | 72659616 | ID=Msa0470560-mRNA-1:five_prime_utr;Parent=Msa0470560-mRNA-1 |
chr3_3 | CDS | 72659712 | 72661341 | 72659712 | ID=Msa0470560-mRNA-1:cds;Parent=Msa0470560-mRNA-1 |
chr3_3 | CDS | 72663577 | 72663632 | 72663577 | ID=Msa0470560-mRNA-1:cds;Parent=Msa0470560-mRNA-1 |
chr3_3 | CDS | 72664530 | 72664799 | 72664530 | ID=Msa0470560-mRNA-1:cds;Parent=Msa0470560-mRNA-1 |
chr3_3 | CDS | 72664900 | 72665136 | 72664900 | ID=Msa0470560-mRNA-1:cds;Parent=Msa0470560-mRNA-1 |
chr3_3 | CDS | 72665281 | 72665400 | 72665281 | ID=Msa0470560-mRNA-1:cds;Parent=Msa0470560-mRNA-1 |
chr3_3 | CDS | 72666362 | 72666517 | 72666362 | ID=Msa0470560-mRNA-1:cds;Parent=Msa0470560-mRNA-1 |
chr3_3 | three_prime_UTR | 72667300 | 72667598 | 72667300 | ID=Msa0470560-mRNA-1:three_prime_utr;Parent=Msa0470560-mRNA-1 |
Gene Sequence |
Protein sequence |