Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1459950 | XP_003593908.1 | 88.770 | 374 | 14 | 1 | 15 | 360 | 1 | 374 | 0.0 | 677 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1459950 | sp|Q9C6Z0|FBK17_ARATH | 66.400 | 375 | 97 | 2 | 15 | 360 | 1 | 375 | 0.0 | 516 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1459950 | G7IP74 | 88.770 | 374 | 14 | 1 | 15 | 360 | 1 | 374 | 0.0 | 677 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006390 | Msa1459950 | 0.800001 | 1.768836e-48 | -8.615850e-47 |
Msa0011170 | Msa1459950 | 0.820033 | 8.492568e-53 | -8.615850e-47 |
Msa0012060 | Msa1459950 | 0.809881 | 1.519827e-50 | -8.615850e-47 |
Msa0015390 | Msa1459950 | 0.813180 | 2.916733e-51 | -8.615850e-47 |
Msa0017510 | Msa1459950 | 0.819732 | 9.949446e-53 | -8.615850e-47 |
Msa0031340 | Msa1459950 | 0.807741 | 4.357923e-50 | -8.615850e-47 |
Msa0033440 | Msa1459950 | 0.814998 | 1.157619e-51 | -8.615850e-47 |
Msa0035150 | Msa1459950 | 0.844481 | 7.362993e-59 | -8.615850e-47 |
Msa0037700 | Msa1459950 | 0.805981 | 1.026467e-49 | -8.615850e-47 |
Msa0037880 | Msa1459950 | 0.800195 | 1.615339e-48 | -8.615850e-47 |
Msa0055240 | Msa1459950 | 0.805374 | 1.377023e-49 | -8.615850e-47 |
Msa0058490 | Msa1459950 | 0.829525 | 4.903131e-55 | -8.615850e-47 |
Msa0058510 | Msa1459950 | 0.835086 | 2.059373e-56 | -8.615850e-47 |
Msa0079070 | Msa1459950 | 0.815384 | 9.504966e-52 | -8.615850e-47 |
Msa0079400 | Msa1459950 | 0.812886 | 3.382542e-51 | -8.615850e-47 |
Msa0086650 | Msa1459950 | 0.802033 | 6.797072e-49 | -8.615850e-47 |
Msa0095560 | Msa1459950 | 0.820949 | 5.233208e-53 | -8.615850e-47 |
Msa0096450 | Msa1459950 | 0.847616 | 1.033230e-59 | -8.615850e-47 |
Msa0117770 | Msa1459950 | 0.806363 | 8.528985e-50 | -8.615850e-47 |
Msa1346080 | Msa1459950 | 0.811503 | 6.775685e-51 | -8.615850e-47 |
Msa1348950 | Msa1459950 | 0.825137 | 5.524039e-54 | -8.615850e-47 |
Msa1357530 | Msa1459950 | 0.809856 | 1.538629e-50 | -8.615850e-47 |
Msa1359040 | Msa1459950 | 0.816216 | 6.201119e-52 | -8.615850e-47 |
Msa1360060 | Msa1459950 | 0.811126 | 8.183797e-51 | -8.615850e-47 |
Msa1361770 | Msa1459950 | 0.810546 | 1.092277e-50 | -8.615850e-47 |
Msa1362880 | Msa1459950 | 0.800967 | 1.124321e-48 | -8.615850e-47 |
Msa1372760 | Msa1459950 | 0.839995 | 1.135027e-57 | -8.615850e-47 |
Msa1382160 | Msa1459950 | 0.922613 | 7.832717e-89 | -8.615850e-47 |
Msa1386750 | Msa1459950 | 0.826293 | 2.937016e-54 | -8.615850e-47 |
Msa1389830 | Msa1459950 | 0.808698 | 2.725962e-50 | -8.615850e-47 |
Msa1393040 | Msa1459950 | 0.849223 | 3.711972e-60 | -8.615850e-47 |
Msa1397120 | Msa1459950 | 0.806508 | 7.950846e-50 | -8.615850e-47 |
Msa1403890 | Msa1459950 | 0.802590 | 5.219619e-49 | -8.615850e-47 |
Msa1407600 | Msa1459950 | 0.817173 | 3.783012e-52 | -8.615850e-47 |
Msa1410690 | Msa1459950 | 0.839068 | 1.976599e-57 | -8.615850e-47 |
Msa1411700 | Msa1459950 | 0.800765 | 1.236250e-48 | -8.615850e-47 |
Msa1427230 | Msa1459950 | 0.835025 | 2.133271e-56 | -8.615850e-47 |
Msa1435270 | Msa1459950 | 0.805549 | 1.265418e-49 | -8.615850e-47 |
Msa1445030 | Msa1459950 | 0.843114 | 1.709185e-58 | -8.615850e-47 |
Msa1451620 | Msa1459950 | -0.837091 | 6.378970e-57 | -8.615850e-47 |
Msa1452240 | Msa1459950 | 0.807882 | 4.067928e-50 | -8.615850e-47 |
Msa1453560 | Msa1459950 | 0.807277 | 5.468870e-50 | -8.615850e-47 |
Msa1459950 | Msa1460050 | 0.804896 | 1.733162e-49 | -8.615850e-47 |
Msa1459950 | Msa1460830 | 0.835747 | 1.401833e-56 | -8.615850e-47 |
Msa1459950 | Msa1461810 | -0.809518 | 1.818377e-50 | -8.615850e-47 |
Msa1459950 | Msa1464940 | 0.858917 | 5.927111e-63 | -8.615850e-47 |
Msa1459950 | Msa1466540 | 0.808303 | 3.308813e-50 | -8.615850e-47 |
Msa0607540 | Msa1459950 | 0.804918 | 1.714935e-49 | -8.615850e-47 |
Msa0608620 | Msa1459950 | 0.803675 | 3.113582e-49 | -8.615850e-47 |
Msa0610590 | Msa1459950 | 0.812919 | 3.327120e-51 | -8.615850e-47 |
Msa0626820 | Msa1459950 | 0.833098 | 6.481436e-56 | -8.615850e-47 |
Msa0647830 | Msa1459950 | 0.806093 | 9.722223e-50 | -8.615850e-47 |
Msa0651190 | Msa1459950 | 0.807919 | 3.995077e-50 | -8.615850e-47 |
Msa0657610 | Msa1459950 | 0.815820 | 7.601548e-52 | -8.615850e-47 |
Msa0657970 | Msa1459950 | 0.806160 | 9.413193e-50 | -8.615850e-47 |
Msa0663920 | Msa1459950 | 0.824209 | 9.137886e-54 | -8.615850e-47 |
Msa0664950 | Msa1459950 | 0.845317 | 4.378540e-59 | -8.615850e-47 |
Msa0669440 | Msa1459950 | 0.813457 | 2.535036e-51 | -8.615850e-47 |
Msa0672690 | Msa1459950 | 0.804369 | 2.233362e-49 | -8.615850e-47 |
Msa0678820 | Msa1459950 | 0.807410 | 5.124042e-50 | -8.615850e-47 |
Msa0688070 | Msa1459950 | 0.825993 | 3.460974e-54 | -8.615850e-47 |
Msa0693380 | Msa1459950 | 0.802045 | 6.757268e-49 | -8.615850e-47 |
Msa0703050 | Msa1459950 | 0.813516 | 2.460486e-51 | -8.615850e-47 |
Msa0715620 | Msa1459950 | 0.800153 | 1.646855e-48 | -8.615850e-47 |
Msa0723110 | Msa1459950 | 0.805161 | 1.525680e-49 | -8.615850e-47 |
Msa0740510 | Msa1459950 | 0.810782 | 9.711191e-51 | -8.615850e-47 |
Msa0740640 | Msa1459950 | 0.827709 | 1.346839e-54 | -8.615850e-47 |
Msa0743720 | Msa1459950 | 0.830176 | 3.403638e-55 | -8.615850e-47 |
Msa0767080 | Msa1459950 | 0.821963 | 3.052935e-53 | -8.615850e-47 |
Msa0777230 | Msa1459950 | 0.808903 | 2.463291e-50 | -8.615850e-47 |
Msa0790890 | Msa1459950 | 0.813817 | 2.112347e-51 | -8.615850e-47 |
Msa0794510 | Msa1459950 | -0.817600 | 3.031106e-52 | -8.615850e-47 |
Msa0798430 | Msa1459950 | 0.829368 | 5.354553e-55 | -8.615850e-47 |
Msa0798860 | Msa1459950 | 0.806521 | 7.900970e-50 | -8.615850e-47 |
Msa0806090 | Msa1459950 | 0.801147 | 1.032632e-48 | -8.615850e-47 |
Msa0820770 | Msa1459950 | 0.818580 | 1.820388e-52 | -8.615850e-47 |
Msa0824680 | Msa1459950 | 0.815689 | 8.129924e-52 | -8.615850e-47 |
Msa0832370 | Msa1459950 | 0.801160 | 1.026239e-48 | -8.615850e-47 |
Msa0835730 | Msa1459950 | 0.809617 | 1.732142e-50 | -8.615850e-47 |
Msa0122590 | Msa1459950 | 0.820427 | 6.897522e-53 | -8.615850e-47 |
Msa0131770 | Msa1459950 | 0.801156 | 1.028191e-48 | -8.615850e-47 |
Msa0133130 | Msa1459950 | 0.816204 | 6.238032e-52 | -8.615850e-47 |
Msa0140780 | Msa1459950 | 0.804881 | 1.746291e-49 | -8.615850e-47 |
Msa0145310 | Msa1459950 | 0.809079 | 2.259284e-50 | -8.615850e-47 |
Msa0157290 | Msa1459950 | 0.820503 | 6.626405e-53 | -8.615850e-47 |
Msa0165210 | Msa1459950 | 0.813206 | 2.878006e-51 | -8.615850e-47 |
Msa0166870 | Msa1459950 | 0.826007 | 3.434839e-54 | -8.615850e-47 |
Msa0170230 | Msa1459950 | 0.810134 | 1.340288e-50 | -8.615850e-47 |
Msa0170320 | Msa1459950 | 0.810624 | 1.050653e-50 | -8.615850e-47 |
Msa0178930 | Msa1459950 | 0.813736 | 2.201314e-51 | -8.615850e-47 |
Msa0191440 | Msa1459950 | 0.803790 | 2.945823e-49 | -8.615850e-47 |
Msa0205510 | Msa1459950 | 0.821501 | 3.905307e-53 | -8.615850e-47 |
Msa0206010 | Msa1459950 | 0.819005 | 1.457620e-52 | -8.615850e-47 |
Msa0210450 | Msa1459950 | 0.817305 | 3.532788e-52 | -8.615850e-47 |
Msa0213520 | Msa1459950 | 0.802290 | 6.019181e-49 | -8.615850e-47 |
Msa0220440 | Msa1459950 | 0.816302 | 5.929994e-52 | -8.615850e-47 |
Msa0220580 | Msa1459950 | 0.826606 | 2.474418e-54 | -8.615850e-47 |
Msa0221060 | Msa1459950 | 0.804880 | 1.747100e-49 | -8.615850e-47 |
Msa0223010 | Msa1459950 | 0.831812 | 1.349885e-55 | -8.615850e-47 |
Msa0223410 | Msa1459950 | -0.833375 | 5.529098e-56 | -8.615850e-47 |
Msa0223910 | Msa1459950 | 0.800556 | 1.363466e-48 | -8.615850e-47 |
Msa0226890 | Msa1459950 | 0.818556 | 1.842729e-52 | -8.615850e-47 |
Msa0231240 | Msa1459950 | 0.803134 | 4.029135e-49 | -8.615850e-47 |
Msa0233300 | Msa1459950 | 0.816401 | 5.637755e-52 | -8.615850e-47 |
Msa0236630 | Msa1459950 | 0.894624 | 2.070433e-75 | -8.615850e-47 |
Msa0237310 | Msa1459950 | 0.841572 | 4.381691e-58 | -8.615850e-47 |
Msa1233500 | Msa1459950 | 0.813111 | 3.020291e-51 | -8.615850e-47 |
Msa1233890 | Msa1459950 | 0.820035 | 8.482532e-53 | -8.615850e-47 |
Msa1242220 | Msa1459950 | 0.816523 | 5.293280e-52 | -8.615850e-47 |
Msa1244610 | Msa1459950 | 0.821360 | 4.208687e-53 | -8.615850e-47 |
Msa1247250 | Msa1459950 | 0.821235 | 4.497721e-53 | -8.615850e-47 |
Msa1257600 | Msa1459950 | 0.801245 | 9.862508e-49 | -8.615850e-47 |
Msa1263060 | Msa1459950 | 0.814298 | 1.654310e-51 | -8.615850e-47 |
Msa1265340 | Msa1459950 | -0.800377 | 1.482800e-48 | -8.615850e-47 |
Msa1267520 | Msa1459950 | 0.800584 | 1.345846e-48 | -8.615850e-47 |
Msa1276440 | Msa1459950 | 0.801181 | 1.016483e-48 | -8.615850e-47 |
Msa1278840 | Msa1459950 | 0.805860 | 1.088713e-49 | -8.615850e-47 |
Msa1279210 | Msa1459950 | 0.806392 | 8.409562e-50 | -8.615850e-47 |
Msa1283860 | Msa1459950 | 0.813009 | 3.179779e-51 | -8.615850e-47 |
Msa1284680 | Msa1459950 | 0.819879 | 9.209946e-53 | -8.615850e-47 |
Msa1292400 | Msa1459950 | 0.815524 | 8.848172e-52 | -8.615850e-47 |
Msa1295540 | Msa1459950 | -0.814803 | 1.278959e-51 | -8.615850e-47 |
Msa1296940 | Msa1459950 | 0.805838 | 1.100464e-49 | -8.615850e-47 |
Msa1305190 | Msa1459950 | 0.819748 | 9.867420e-53 | -8.615850e-47 |
Msa1305340 | Msa1459950 | 0.836405 | 9.543082e-57 | -8.615850e-47 |
Msa1305350 | Msa1459950 | 0.818085 | 2.355721e-52 | -8.615850e-47 |
Msa1314340 | Msa1459950 | 0.814914 | 1.208530e-51 | -8.615850e-47 |
Msa1318990 | Msa1459950 | 0.806874 | 6.655841e-50 | -8.615850e-47 |
Msa1322890 | Msa1459950 | 0.822807 | 1.944221e-53 | -8.615850e-47 |
Msa1324500 | Msa1459950 | 0.800369 | 1.488885e-48 | -8.615850e-47 |
Msa1325860 | Msa1459950 | -0.812473 | 4.165176e-51 | -8.615850e-47 |
Msa1327680 | Msa1459950 | 0.805877 | 1.079590e-49 | -8.615850e-47 |
Msa1329550 | Msa1459950 | 0.801508 | 8.710079e-49 | -8.615850e-47 |
Msa1331000 | Msa1459950 | 0.818995 | 1.465330e-52 | -8.615850e-47 |
Msa1333730 | Msa1459950 | 0.802588 | 5.225342e-49 | -8.615850e-47 |
Msa0365490 | Msa1459950 | 0.811162 | 8.037431e-51 | -8.615850e-47 |
Msa0373450 | Msa1459950 | 0.828311 | 9.648193e-55 | -8.615850e-47 |
Msa0373930 | Msa1459950 | 0.813026 | 3.152122e-51 | -8.615850e-47 |
Msa0379640 | Msa1459950 | 0.857849 | 1.233227e-62 | -8.615850e-47 |
Msa0380740 | Msa1459950 | 0.802244 | 6.150864e-49 | -8.615850e-47 |
Msa0382180 | Msa1459950 | 0.821550 | 3.803338e-53 | -8.615850e-47 |
Msa0387250 | Msa1459950 | 0.819719 | 1.002106e-52 | -8.615850e-47 |
Msa0389810 | Msa1459950 | 0.800968 | 1.123452e-48 | -8.615850e-47 |
Msa0391690 | Msa1459950 | 0.801829 | 7.484053e-49 | -8.615850e-47 |
Msa0393080 | Msa1459950 | 0.802883 | 4.541015e-49 | -8.615850e-47 |
Msa0394340 | Msa1459950 | 0.817284 | 3.571077e-52 | -8.615850e-47 |
Msa0412840 | Msa1459950 | 0.805634 | 1.214123e-49 | -8.615850e-47 |
Msa0420960 | Msa1459950 | 0.809663 | 1.693334e-50 | -8.615850e-47 |
Msa0428930 | Msa1459950 | 0.823156 | 1.612147e-53 | -8.615850e-47 |
Msa0431690 | Msa1459950 | 0.834830 | 2.388645e-56 | -8.615850e-47 |
Msa0433410 | Msa1459950 | -0.806399 | 8.383894e-50 | -8.615850e-47 |
Msa0439970 | Msa1459950 | 0.839159 | 1.872486e-57 | -8.615850e-47 |
Msa0440750 | Msa1459950 | 0.819732 | 9.953859e-53 | -8.615850e-47 |
Msa0442200 | Msa1459950 | 0.817723 | 2.844784e-52 | -8.615850e-47 |
Msa0449760 | Msa1459950 | 0.810277 | 1.248860e-50 | -8.615850e-47 |
Msa0453350 | Msa1459950 | 0.824750 | 6.813951e-54 | -8.615850e-47 |
Msa0458440 | Msa1459950 | 0.819937 | 8.932790e-53 | -8.615850e-47 |
Msa0466390 | Msa1459950 | 0.812476 | 4.159900e-51 | -8.615850e-47 |
Msa0467060 | Msa1459950 | 0.802065 | 6.693439e-49 | -8.615850e-47 |
Msa0469940 | Msa1459950 | -0.813425 | 2.576067e-51 | -8.615850e-47 |
Msa0470560 | Msa1459950 | 0.801491 | 8.779922e-49 | -8.615850e-47 |
Msa0471900 | Msa1459950 | 0.802679 | 5.003993e-49 | -8.615850e-47 |
Msa0475490 | Msa1459950 | 0.850873 | 1.281441e-60 | -8.615850e-47 |
Msa0477130 | Msa1459950 | -0.822588 | 2.186242e-53 | -8.615850e-47 |
Msa0991670 | Msa1459950 | 0.808794 | 2.599698e-50 | -8.615850e-47 |
Msa0991930 | Msa1459950 | 0.800717 | 1.264307e-48 | -8.615850e-47 |
Msa0992490 | Msa1459950 | -0.810488 | 1.124208e-50 | -8.615850e-47 |
Msa0993290 | Msa1459950 | 0.805487 | 1.303918e-49 | -8.615850e-47 |
Msa0993600 | Msa1459950 | 0.802775 | 4.780718e-49 | -8.615850e-47 |
Msa1000880 | Msa1459950 | 0.820691 | 6.000632e-53 | -8.615850e-47 |
Msa1023920 | Msa1459950 | 0.809473 | 1.859595e-50 | -8.615850e-47 |
Msa1030970 | Msa1459950 | 0.814761 | 1.306528e-51 | -8.615850e-47 |
Msa1039800 | Msa1459950 | 0.807620 | 4.623654e-50 | -8.615850e-47 |
Msa1041600 | Msa1459950 | -0.809495 | 1.840017e-50 | -8.615850e-47 |
Msa1043510 | Msa1459950 | 0.812567 | 3.972187e-51 | -8.615850e-47 |
Msa1044420 | Msa1459950 | 0.816086 | 6.629395e-52 | -8.615850e-47 |
Msa1062920 | Msa1459950 | 0.808973 | 2.380100e-50 | -8.615850e-47 |
Msa1065610 | Msa1459950 | 0.818875 | 1.560025e-52 | -8.615850e-47 |
Msa1068200 | Msa1459950 | -0.806507 | 7.954322e-50 | -8.615850e-47 |
Msa1074530 | Msa1459950 | 0.803568 | 3.276948e-49 | -8.615850e-47 |
Msa1075220 | Msa1459950 | -0.853154 | 2.883131e-61 | -8.615850e-47 |
Msa1082500 | Msa1459950 | 0.834544 | 2.819661e-56 | -8.615850e-47 |
Msa1084430 | Msa1459950 | 0.810733 | 9.953727e-51 | -8.615850e-47 |
Msa1085300 | Msa1459950 | 0.805731 | 1.158896e-49 | -8.615850e-47 |
Msa1090260 | Msa1459950 | 0.835745 | 1.403138e-56 | -8.615850e-47 |
Msa0243710 | Msa1459950 | 0.815456 | 9.161793e-52 | -8.615850e-47 |
Msa0249100 | Msa1459950 | 0.804832 | 1.787484e-49 | -8.615850e-47 |
Msa0253200 | Msa1459950 | 0.812627 | 3.855128e-51 | -8.615850e-47 |
Msa0258760 | Msa1459950 | 0.814187 | 1.750087e-51 | -8.615850e-47 |
Msa0274730 | Msa1459950 | 0.843870 | 1.073791e-58 | -8.615850e-47 |
Msa0287410 | Msa1459950 | 0.821135 | 4.743203e-53 | -8.615850e-47 |
Msa0287650 | Msa1459950 | 0.811071 | 8.408289e-51 | -8.615850e-47 |
Msa0292030 | Msa1459950 | 0.813342 | 2.686721e-51 | -8.615850e-47 |
Msa0294950 | Msa1459950 | 0.813900 | 2.025001e-51 | -8.615850e-47 |
Msa0306210 | Msa1459950 | -0.805196 | 1.500164e-49 | -8.615850e-47 |
Msa0315290 | Msa1459950 | 0.924411 | 7.301725e-90 | -8.615850e-47 |
Msa0315530 | Msa1459950 | 0.841177 | 5.564239e-58 | -8.615850e-47 |
Msa0319170 | Msa1459950 | 0.817736 | 2.825388e-52 | -8.615850e-47 |
Msa0323370 | Msa1459950 | 0.802190 | 6.310996e-49 | -8.615850e-47 |
Msa0326110 | Msa1459950 | 0.818622 | 1.780766e-52 | -8.615850e-47 |
Msa0338110 | Msa1459950 | 0.824666 | 7.132865e-54 | -8.615850e-47 |
Msa0339620 | Msa1459950 | 0.837324 | 5.560162e-57 | -8.615850e-47 |
Msa0344690 | Msa1459950 | -0.803051 | 4.191836e-49 | -8.615850e-47 |
Msa0344910 | Msa1459950 | 0.831010 | 2.126631e-55 | -8.615850e-47 |
Msa0344980 | Msa1459950 | 0.840287 | 9.523290e-58 | -8.615850e-47 |
Msa0346430 | Msa1459950 | 0.803813 | 2.914061e-49 | -8.615850e-47 |
Msa0363790 | Msa1459950 | 0.802270 | 6.074476e-49 | -8.615850e-47 |
Msa1107900 | Msa1459950 | 0.801734 | 7.830435e-49 | -8.615850e-47 |
Msa1116130 | Msa1459950 | -0.832101 | 1.145741e-55 | -8.615850e-47 |
Msa1116690 | Msa1459950 | 0.800551 | 1.366694e-48 | -8.615850e-47 |
Msa1129550 | Msa1459950 | 0.809895 | 1.509150e-50 | -8.615850e-47 |
Msa1131220 | Msa1459950 | 0.814264 | 1.683452e-51 | -8.615850e-47 |
Msa1131940 | Msa1459950 | -0.815226 | 1.030263e-51 | -8.615850e-47 |
Msa1137570 | Msa1459950 | 0.807546 | 4.793778e-50 | -8.615850e-47 |
Msa1139000 | Msa1459950 | -0.814814 | 1.271582e-51 | -8.615850e-47 |
Msa1143270 | Msa1459950 | 0.806506 | 7.959190e-50 | -8.615850e-47 |
Msa1156340 | Msa1459950 | -0.801943 | 7.093398e-49 | -8.615850e-47 |
Msa1162550 | Msa1459950 | -0.835598 | 1.528670e-56 | -8.615850e-47 |
Msa1166500 | Msa1459950 | -0.813452 | 2.541812e-51 | -8.615850e-47 |
Msa1170170 | Msa1459950 | 0.831343 | 1.762026e-55 | -8.615850e-47 |
Msa1171910 | Msa1459950 | 0.804045 | 2.607859e-49 | -8.615850e-47 |
Msa1174040 | Msa1459950 | 0.831456 | 1.652598e-55 | -8.615850e-47 |
Msa1183100 | Msa1459950 | -0.803564 | 3.282866e-49 | -8.615850e-47 |
Msa1190930 | Msa1459950 | 0.811159 | 8.050076e-51 | -8.615850e-47 |
Msa1199220 | Msa1459950 | 0.803032 | 4.230272e-49 | -8.615850e-47 |
Msa1202770 | Msa1459950 | -0.818296 | 2.111226e-52 | -8.615850e-47 |
Msa1204530 | Msa1459950 | 0.803263 | 3.789881e-49 | -8.615850e-47 |
Msa1206100 | Msa1459950 | 0.802646 | 5.083523e-49 | -8.615850e-47 |
Msa1207380 | Msa1459950 | 0.800684 | 1.283934e-48 | -8.615850e-47 |
Msa1212940 | Msa1459950 | 0.814597 | 1.421037e-51 | -8.615850e-47 |
Msa1223870 | Msa1459950 | 0.814969 | 1.174878e-51 | -8.615850e-47 |
Msa1224480 | Msa1459950 | 0.828491 | 8.729393e-55 | -8.615850e-47 |
Msa0484780 | Msa1459950 | 0.831392 | 1.713649e-55 | -8.615850e-47 |
Msa0488270 | Msa1459950 | 0.812597 | 3.914263e-51 | -8.615850e-47 |
Msa0495320 | Msa1459950 | 0.813135 | 2.982781e-51 | -8.615850e-47 |
Msa0495330 | Msa1459950 | 0.805669 | 1.194069e-49 | -8.615850e-47 |
Msa0502100 | Msa1459950 | 0.806271 | 8.918329e-50 | -8.615850e-47 |
Msa0503060 | Msa1459950 | 0.800609 | 1.330024e-48 | -8.615850e-47 |
Msa0512750 | Msa1459950 | 0.824799 | 6.637815e-54 | -8.615850e-47 |
Msa0512900 | Msa1459950 | 0.824822 | 6.554211e-54 | -8.615850e-47 |
Msa0516170 | Msa1459950 | 0.801710 | 7.919477e-49 | -8.615850e-47 |
Msa0516440 | Msa1459950 | 0.821566 | 3.772102e-53 | -8.615850e-47 |
Msa0523460 | Msa1459950 | 0.803430 | 3.499100e-49 | -8.615850e-47 |
Msa0530940 | Msa1459950 | 0.808685 | 2.743231e-50 | -8.615850e-47 |
Msa0536220 | Msa1459950 | 0.846940 | 1.583427e-59 | -8.615850e-47 |
Msa0542520 | Msa1459950 | 0.808630 | 2.817705e-50 | -8.615850e-47 |
Msa0553460 | Msa1459950 | 0.813080 | 3.067100e-51 | -8.615850e-47 |
Msa0554740 | Msa1459950 | 0.843025 | 1.805536e-58 | -8.615850e-47 |
Msa0555020 | Msa1459950 | 0.811205 | 7.867396e-51 | -8.615850e-47 |
Msa0562440 | Msa1459950 | 0.800699 | 1.275253e-48 | -8.615850e-47 |
Msa0578860 | Msa1459950 | 0.802897 | 4.511138e-49 | -8.615850e-47 |
Msa0578970 | Msa1459950 | 0.817158 | 3.811769e-52 | -8.615850e-47 |
Msa0585230 | Msa1459950 | 0.824318 | 8.611827e-54 | -8.615850e-47 |
Msa0585700 | Msa1459950 | 0.805326 | 1.408884e-49 | -8.615850e-47 |
Msa0599890 | Msa1459950 | 0.858949 | 5.798260e-63 | -8.615850e-47 |
Msa0842650 | Msa1459950 | 0.809050 | 2.291979e-50 | -8.615850e-47 |
Msa0846810 | Msa1459950 | 0.828467 | 8.844205e-55 | -8.615850e-47 |
Msa0857640 | Msa1459950 | 0.800290 | 1.545090e-48 | -8.615850e-47 |
Msa0861090 | Msa1459950 | 0.811437 | 7.003402e-51 | -8.615850e-47 |
Msa0862110 | Msa1459950 | 0.806175 | 9.347142e-50 | -8.615850e-47 |
Msa0876850 | Msa1459950 | -0.824158 | 9.390290e-54 | -8.615850e-47 |
Msa0880140 | Msa1459950 | 0.814120 | 1.810996e-51 | -8.615850e-47 |
Msa0907070 | Msa1459950 | 0.801162 | 1.025576e-48 | -8.615850e-47 |
Msa0927380 | Msa1459950 | 0.803740 | 3.017775e-49 | -8.615850e-47 |
Msa0927670 | Msa1459950 | 0.833789 | 4.358102e-56 | -8.615850e-47 |
Msa0931520 | Msa1459950 | 0.800474 | 1.416865e-48 | -8.615850e-47 |
Msa0933100 | Msa1459950 | 0.826322 | 2.891709e-54 | -8.615850e-47 |
Msa0933230 | Msa1459950 | 0.800993 | 1.110312e-48 | -8.615850e-47 |
Msa0942080 | Msa1459950 | -0.828613 | 8.155941e-55 | -8.615850e-47 |
Msa0947660 | Msa1459950 | 0.801275 | 9.723787e-49 | -8.615850e-47 |
Msa0953120 | Msa1459950 | 0.802720 | 4.906656e-49 | -8.615850e-47 |
Msa0960160 | Msa1459950 | 0.807583 | 4.707916e-50 | -8.615850e-47 |
Msa0969520 | Msa1459950 | 0.837374 | 5.396847e-57 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1459950 | MtrunA17_Chr2g0285851 | 88.770 | 374 | 14 | 1 | 15 | 360 | 1 | 374 | 0.0 | 677 |
Msa1459950 | MtrunA17_Chr3g0138981 | 33.123 | 317 | 164 | 6 | 56 | 343 | 7 | 304 | 7.20e-56 | 186 |
Msa1459950 | MtrunA17_Chr4g0063531 | 29.720 | 286 | 160 | 8 | 58 | 312 | 59 | 334 | 3.09e-31 | 122 |
Msa1459950 | MtrunA17_Chr8g0378511 | 25.305 | 328 | 201 | 9 | 63 | 356 | 74 | 391 | 6.33e-26 | 108 |
Msa1459950 | MtrunA17_Chr3g0115401 | 25.581 | 344 | 158 | 12 | 66 | 316 | 43 | 381 | 3.91e-22 | 97.4 |
Msa1459950 | MtrunA17_Chr2g0278921 | 26.000 | 350 | 152 | 13 | 66 | 316 | 43 | 384 | 6.71e-21 | 94.0 |
Msa1459950 | MtrunA17_Chr8g0348991 | 27.928 | 333 | 193 | 14 | 65 | 362 | 24 | 344 | 9.15e-21 | 92.4 |
Msa1459950 | MtrunA17_Chr8g0377241 | 26.974 | 304 | 168 | 10 | 59 | 320 | 34 | 325 | 5.56e-19 | 87.4 |
Msa1459950 | MtrunA17_Chr3g0129221 | 26.667 | 285 | 170 | 8 | 66 | 324 | 9 | 280 | 5.76e-17 | 81.3 |
Msa1459950 | MtrunA17_Chr3g0122681 | 25.260 | 289 | 174 | 8 | 63 | 320 | 32 | 309 | 4.43e-16 | 79.0 |
Msa1459950 | MtrunA17_Chr2g0326541 | 25.407 | 307 | 190 | 8 | 64 | 340 | 18 | 315 | 1.01e-14 | 74.7 |
Msa1459950 | MtrunA17_Chr6g0459491 | 24.000 | 300 | 195 | 10 | 87 | 364 | 104 | 392 | 7.66e-13 | 69.3 |
Msa1459950 | MtrunA17_Chr7g0243481 | 32.192 | 146 | 93 | 5 | 142 | 285 | 165 | 306 | 5.68e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1459950 | AT1G30090.1 | 66.400 | 375 | 97 | 2 | 15 | 360 | 1 | 375 | 0.0 | 516 |
Msa1459950 | AT2G24540.1 | 36.228 | 334 | 177 | 7 | 49 | 351 | 11 | 339 | 2.23e-67 | 217 |
Msa1459950 | AT1G55270.1 | 28.929 | 280 | 164 | 7 | 63 | 314 | 75 | 347 | 1.72e-29 | 118 |
Msa1459950 | AT1G22040.1 | 28.280 | 343 | 149 | 14 | 66 | 316 | 43 | 380 | 1.14e-23 | 102 |
Msa1459950 | AT1G67480.3 | 28.720 | 289 | 169 | 6 | 56 | 314 | 29 | 310 | 2.83e-23 | 100 |
Msa1459950 | AT1G67480.1 | 28.720 | 289 | 169 | 6 | 56 | 314 | 29 | 310 | 2.83e-23 | 100 |
Msa1459950 | AT1G67480.2 | 28.720 | 289 | 169 | 6 | 56 | 314 | 29 | 310 | 2.83e-23 | 100 |
Msa1459950 | AT1G55270.2 | 29.596 | 223 | 149 | 6 | 90 | 311 | 3 | 218 | 5.03e-22 | 95.5 |
Msa1459950 | AT5G60570.2 | 26.280 | 293 | 172 | 8 | 59 | 318 | 39 | 320 | 3.05e-15 | 77.0 |
Msa1459950 | AT5G60570.1 | 26.280 | 293 | 172 | 8 | 59 | 318 | 39 | 320 | 3.05e-15 | 77.0 |
Msa1459950 | AT5G60570.3 | 26.280 | 293 | 172 | 8 | 59 | 318 | 39 | 320 | 3.05e-15 | 77.0 |
Msa1459950 | AT1G27420.1 | 23.529 | 306 | 158 | 8 | 65 | 343 | 9 | 265 | 3.14e-15 | 76.6 |
Msa1459950 | AT2G21950.1 | 27.243 | 301 | 170 | 13 | 66 | 330 | 20 | 307 | 2.11e-13 | 71.2 |
Msa1459950 | AT3G63220.3 | 26.056 | 284 | 157 | 11 | 66 | 314 | 11 | 276 | 2.87e-12 | 67.8 |
Msa1459950 | AT3G63220.2 | 26.056 | 284 | 157 | 11 | 66 | 314 | 11 | 276 | 2.87e-12 | 67.8 |
Msa1459950 | AT3G63220.1 | 26.056 | 284 | 157 | 11 | 66 | 314 | 4 | 269 | 3.20e-12 | 67.4 |
Msa1459950 | AT2G44130.1 | 27.143 | 210 | 142 | 6 | 64 | 268 | 77 | 280 | 2.94e-11 | 64.7 |
Find 109 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCAGGTAAGCCCGGAATTA+AGG | 0.209782 | tig0040567:-3151 | None:intergenic |
GGTTCAAGCGTGGTTGTTTA+TGG | 0.236597 | tig0040567:+3881 | Msa1459950:CDS |
TTCCCCTCACAACTTTCTTT+TGG | 0.256081 | tig0040567:-4102 | None:intergenic |
TAATTGTCTTCTTCGTCTTC+CGG | 0.313205 | tig0040567:+3185 | Msa1459950:CDS |
TTGTCCTTGCAAGGCATTGC+AGG | 0.324010 | tig0040567:-3401 | None:intergenic |
TGTCGTAGGCCGGAATCTTC+TGG | 0.330235 | tig0040567:+4051 | Msa1459950:CDS |
AAGAAAGTTGTGAGGGGAAA+TGG | 0.336256 | tig0040567:+4106 | Msa1459950:CDS |
TGACACTATCTCCCAAGTTT+AGG | 0.343062 | tig0040567:+3061 | Msa1459950:CDS |
AGCCATAGTTTCCCAGCTAT+TGG | 0.348050 | tig0040567:-3834 | None:intergenic |
TGCCAACATGGGAACCAATA+TGG | 0.351045 | tig0040567:+3709 | Msa1459950:CDS |
TGTTTCTTATTAAAGGGTTT+AGG | 0.355686 | tig0040567:+2945 | Msa1459950:intron |
CTTCCCAGGAATCGGCTTCC+TGG | 0.361899 | tig0040567:-3955 | None:intergenic |
AGGCAAAGGGGAGCCATCTA+TGG | 0.368132 | tig0040567:-3978 | None:intergenic |
TAGATCCGATTAGCGGGAAT+TGG | 0.368843 | tig0040567:+3678 | Msa1459950:CDS |
CCTCTAGGAGAGACATAAAA+AGG | 0.369553 | tig0040567:-3791 | None:intergenic |
AACCAATAGCTGGGAAACTA+TGG | 0.377206 | tig0040567:+3832 | Msa1459950:CDS |
AGAGAAGAACCCTTAATTCC+GGG | 0.383870 | tig0040567:+3141 | Msa1459950:CDS |
AAGAGAAGAACCCTTAATTC+CGG | 0.391873 | tig0040567:+3140 | Msa1459950:CDS |
GTTCAGAACTGCAGCATCAT+AGG | 0.399835 | tig0040567:-3735 | None:intergenic |
ATAACCAGGAAGCCGATTCC+TGG | 0.405175 | tig0040567:+3951 | Msa1459950:CDS |
CAAATGGTTTCAAAGATCCT+TGG | 0.422633 | tig0040567:+3294 | Msa1459950:CDS |
GTTTCCCAGCTATTGGTTCT+CGG | 0.422970 | tig0040567:-3827 | None:intergenic |
GCGCGCCAATTCCCGCTAAT+CGG | 0.425020 | tig0040567:-3683 | None:intergenic |
AGCATCATAGGATGCCATAT+TGG | 0.428156 | tig0040567:-3723 | None:intergenic |
TCAGGTAAGCCCGGAATTAA+GGG | 0.433050 | tig0040567:-3150 | None:intergenic |
TGCATATTTGCTCAGGCAAA+GGG | 0.438541 | tig0040567:-3991 | None:intergenic |
GAGATTTAACGATAAAGATA+AGG | 0.440458 | tig0040567:+2977 | Msa1459950:intron |
GCTCGAAAGAATGAAGCTTA+AGG | 0.440805 | tig0040567:+3925 | Msa1459950:CDS |
TCACAAGCATTCACAGCAAA+AGG | 0.445454 | tig0040567:-4016 | None:intergenic |
CAACAGCAACCAGAAGATTC+CGG | 0.446885 | tig0040567:-4060 | None:intergenic |
TTATGTCTCTCCTAGAGGAC+AGG | 0.451993 | tig0040567:+3796 | Msa1459950:CDS |
AACCACCGCTAACCTAAACT+TGG | 0.453592 | tig0040567:-3073 | None:intergenic |
AAAGGTTTGCATATTTGCTC+AGG | 0.456311 | tig0040567:-3998 | None:intergenic |
CGTGGATTGTCCTCTTGACT+TGG | 0.459145 | tig0040567:+3502 | Msa1459950:CDS |
TTTGCATATCATAAGTGTAC+TGG | 0.463348 | tig0040567:+3326 | Msa1459950:CDS |
AAGGACAAGGTTTGTCCTCA+TGG | 0.464137 | tig0040567:+3416 | Msa1459950:CDS |
ATGATGCTGCAGTTCTGAAC+GGG | 0.464281 | tig0040567:+3738 | Msa1459950:CDS |
ATCTATGGCTTCCCAGGAAT+CGG | 0.471739 | tig0040567:-3963 | None:intergenic |
GATTCCTGGGAAGCCATAGA+TGG | 0.472750 | tig0040567:+3965 | Msa1459950:CDS |
GTCAAATTTATGTCGTAGGC+CGG | 0.477828 | tig0040567:+4041 | Msa1459950:CDS |
ATCTCCCAAGTTTAGGTTAG+CGG | 0.477981 | tig0040567:+3068 | Msa1459950:CDS |
TACTGGAAAGATTCAATGGC+AGG | 0.482203 | tig0040567:+3343 | Msa1459950:CDS |
TTGTAACAGAAGGATGGTTA+TGG | 0.483194 | tig0040567:+3768 | Msa1459950:CDS |
CAATTAAGAGCAACATCATC+AGG | 0.483657 | tig0040567:-3168 | None:intergenic |
CGGAATCTTCTGGTTGCTGT+TGG | 0.483823 | tig0040567:+4061 | Msa1459950:CDS |
GGAGCCATCTATGGCTTCCC+AGG | 0.485903 | tig0040567:-3969 | None:intergenic |
TAGTACTGATCTTTATGAGC+TGG | 0.486572 | tig0040567:+3640 | Msa1459950:CDS |
ACGATCCGAGAACCAATAGC+TGG | 0.496530 | tig0040567:+3822 | Msa1459950:CDS |
TTGCATATTTGCTCAGGCAA+AGG | 0.504929 | tig0040567:-3992 | None:intergenic |
CTTGCAAGGCATTGCAGGGA+TGG | 0.507543 | tig0040567:-3396 | None:intergenic |
AGCTGGGAAACTATGGCTGT+TGG | 0.507613 | tig0040567:+3839 | Msa1459950:CDS |
GATGGGATGGTTTATGCAGC+TGG | 0.507844 | tig0040567:+3611 | Msa1459950:CDS |
TGCCATATTGGTTCCCATGT+TGG | 0.508940 | tig0040567:-3711 | None:intergenic |
TGCAATGCCTTGCAAGGACA+AGG | 0.510866 | tig0040567:+3403 | Msa1459950:CDS |
ATGGGATGGTTTATGCAGCT+GGG | 0.512009 | tig0040567:+3612 | Msa1459950:CDS |
AGGTATTAGATCCGATTAGC+GGG | 0.521082 | tig0040567:+3672 | Msa1459950:CDS |
TTGGGAGATAGTGTCATTTG+AGG | 0.521340 | tig0040567:-3054 | None:intergenic |
AATGGAACTTCAGTGTTCAA+TGG | 0.527552 | tig0040567:+4124 | Msa1459950:CDS |
AGTGTACTGGAAAGATTCAA+TGG | 0.529957 | tig0040567:+3339 | Msa1459950:CDS |
GCTCAGAAACAACAAATAAG+TGG | 0.537113 | tig0040567:-3904 | None:intergenic |
TAACCAGGAAGCCGATTCCT+GGG | 0.538113 | tig0040567:+3952 | Msa1459950:CDS |
CTTAGAGAATGATCTAACTC+TGG | 0.539641 | tig0040567:-3120 | None:intergenic |
TTTGCCAGTGGAGTAATCGA+TGG | 0.542803 | tig0040567:+3593 | Msa1459950:CDS |
CAAGCACCGGTTCACAAGCT+AGG | 0.543317 | tig0040567:+3027 | Msa1459950:CDS |
TTGCCAGTGGAGTAATCGAT+GGG | 0.543911 | tig0040567:+3594 | Msa1459950:CDS |
GGACTTAGAGAAGGGTGGAC+TGG | 0.550423 | tig0040567:+3860 | Msa1459950:CDS |
TTGGCGCGCTATTGCCAACA+TGG | 0.550527 | tig0040567:+3697 | Msa1459950:CDS |
GGATCACCTAGCTTGTGAAC+CGG | 0.553072 | tig0040567:-3033 | None:intergenic |
GAACCAAAAGAAAGTTGTGA+GGG | 0.555102 | tig0040567:+4099 | Msa1459950:CDS |
GCAACATCATCAGGTAAGCC+CGG | 0.556029 | tig0040567:-3159 | None:intergenic |
GGATCGTAGACCTGTCCTCT+AGG | 0.560032 | tig0040567:-3806 | None:intergenic |
CATCCCTGCAATGCCTTGCA+AGG | 0.560526 | tig0040567:+3397 | Msa1459950:CDS |
GATTGTCAAATTTATGTCGT+AGG | 0.561359 | tig0040567:+4037 | Msa1459950:CDS |
GAATGATCTAACTCTGGCAT+CGG | 0.561877 | tig0040567:-3114 | None:intergenic |
CATCCCATCGATTACTCCAC+TGG | 0.564791 | tig0040567:-3597 | None:intergenic |
TGTCCTTGCAAGGCATTGCA+GGG | 0.566024 | tig0040567:-3400 | None:intergenic |
TCTTTACGTATGCGGTGGCA+TGG | 0.567533 | tig0040567:+3472 | Msa1459950:CDS |
TATGATGCTGCAGTTCTGAA+CGG | 0.569619 | tig0040567:+3737 | Msa1459950:CDS |
ATGGCTGTTGGACTTAGAGA+AGG | 0.574595 | tig0040567:+3851 | Msa1459950:CDS |
CAGTGGAGTAATCGATGGGA+TGG | 0.581579 | tig0040567:+3598 | Msa1459950:CDS |
GGACAAACCTTGTCCTTGCA+AGG | 0.597418 | tig0040567:-3410 | None:intergenic |
TGGGATGGTTTATGCAGCTG+GGG | 0.601401 | tig0040567:+3613 | Msa1459950:CDS |
GAAGCTTAAGGTTTATAACC+AGG | 0.604476 | tig0040567:+3937 | Msa1459950:CDS |
TCCCAAGTTTAGGTTAGCGG+TGG | 0.605858 | tig0040567:+3071 | Msa1459950:CDS |
TTATGAGCTGGATTCAGCTG+AGG | 0.606127 | tig0040567:+3652 | Msa1459950:CDS |
TATTTCAACACCAAGTCAAG+AGG | 0.607388 | tig0040567:-3512 | None:intergenic |
CGGTGGCATGGTCTCTGACG+TGG | 0.609464 | tig0040567:+3484 | Msa1459950:CDS |
GAGGTATTAGATCCGATTAG+CGG | 0.618113 | tig0040567:+3671 | Msa1459950:CDS |
GGGAAACTGCTTGTAACAGA+AGG | 0.619168 | tig0040567:+3758 | Msa1459950:CDS |
CGATCCGAGAACCAATAGCT+GGG | 0.621734 | tig0040567:+3823 | Msa1459950:CDS |
TGGCTGTTGGACTTAGAGAA+GGG | 0.623432 | tig0040567:+3852 | Msa1459950:CDS |
AACTGCTTGTAACAGAAGGA+TGG | 0.627353 | tig0040567:+3762 | Msa1459950:CDS |
TGGCGCGCTATTGCCAACAT+GGG | 0.632332 | tig0040567:+3698 | Msa1459950:CDS |
TGAATCGAATGATCAGTGCT+AGG | 0.644133 | tig0040567:+3564 | Msa1459950:CDS |
CTGTTGGACTTAGAGAAGGG+TGG | 0.655252 | tig0040567:+3855 | Msa1459950:CDS |
GGTAATCTTTACGTATGCGG+TGG | 0.656082 | tig0040567:+3467 | Msa1459950:CDS |
TGTGTTTCGATGCCTCACGA+TGG | 0.656289 | tig0040567:+3446 | Msa1459950:CDS |
ACCACCGCTAACCTAAACTT+GGG | 0.656767 | tig0040567:-3072 | None:intergenic |
TGAACCAAAAGAAAGTTGTG+AGG | 0.660024 | tig0040567:+4098 | Msa1459950:CDS |
GCATATTTGCTCAGGCAAAG+GGG | 0.660049 | tig0040567:-3990 | None:intergenic |
CTAGTAACTCAAAATGCGCG+TGG | 0.665345 | tig0040567:+2026 | None:intergenic |
ACGTAAAGATTACCATCGTG+AGG | 0.668276 | tig0040567:-3458 | None:intergenic |
AGGGTGGACTGGTTCAAGCG+TGG | 0.672213 | tig0040567:+3871 | Msa1459950:CDS |
GGGATGGTTTATGCAGCTGG+GGG | 0.673599 | tig0040567:+3614 | Msa1459950:CDS |
ACTGATCATTCGATTCATCA+CGG | 0.677591 | tig0040567:-3558 | None:intergenic |
GGATGGTTTATGCAGCTGGG+GGG | 0.678556 | tig0040567:+3615 | Msa1459950:CDS |
AACCAAAAGAAAGTTGTGAG+GGG | 0.685350 | tig0040567:+4100 | Msa1459950:CDS |
GATGGTAATCTTTACGTATG+CGG | 0.716864 | tig0040567:+3464 | Msa1459950:CDS |
GAAACACACCGAAAACCATG+AGG | 0.732405 | tig0040567:-3431 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATTGTTTCTTATTAAA+GGG | + | tig0040567:2939-2958 | Msa1459950:intron | 10.0% |
!!! | TTTTATTGTTTCTTATTAAA+GGG | + | tig0040567:2939-2958 | Msa1459950:intron | 10.0% |
!! | AATAAAAATCTCAACTTTAT+AGG | - | tig0040567:2450-2469 | None:intergenic | 15.0% |
!!! | CATTTTTTATAGCAAATTAA+AGG | - | tig0040567:2771-2790 | None:intergenic | 15.0% |
!!! | GTTTTATTGTTTCTTATTAA+AGG | + | tig0040567:2938-2957 | Msa1459950:intron | 15.0% |
!! | AATAAAAATCTCAACTTTAT+AGG | - | tig0040567:2450-2469 | None:intergenic | 15.0% |
!!! | CATTTTTTATAGCAAATTAA+AGG | - | tig0040567:2771-2790 | None:intergenic | 15.0% |
!!! | GTTTTATTGTTTCTTATTAA+AGG | + | tig0040567:2938-2957 | Msa1459950:intron | 15.0% |
!!! | GATGATTAATTTTTGCTAAT+AGG | - | tig0040567:2110-2129 | None:intergenic | 20.0% |
!! | TTAACACATACATAAATTCT+GGG | + | tig0040567:2370-2389 | Msa1459950:intron | 20.0% |
!!! | TTTTTATTTGATATTGCTTC+TGG | + | tig0040567:2462-2481 | Msa1459950:intron | 20.0% |
!!! | TTTTATTTGATATTGCTTCT+GGG | + | tig0040567:2463-2482 | Msa1459950:intron | 20.0% |
!! | ATCAGTTGAATATCTAATAA+GGG | + | tig0040567:2648-2667 | Msa1459950:intron | 20.0% |
!!! | TGTTTTATTCTATCTTCTTT+TGG | + | tig0040567:2684-2703 | Msa1459950:intron | 20.0% |
!!! | GATGATTAATTTTTGCTAAT+AGG | - | tig0040567:2110-2129 | None:intergenic | 20.0% |
!! | TTAACACATACATAAATTCT+GGG | + | tig0040567:2370-2389 | Msa1459950:intron | 20.0% |
!!! | TTTTTATTTGATATTGCTTC+TGG | + | tig0040567:2462-2481 | Msa1459950:intron | 20.0% |
!!! | TTTTATTTGATATTGCTTCT+GGG | + | tig0040567:2463-2482 | Msa1459950:intron | 20.0% |
!! | ATCAGTTGAATATCTAATAA+GGG | + | tig0040567:2648-2667 | Msa1459950:intron | 20.0% |
!!! | TGTTTTATTCTATCTTCTTT+TGG | + | tig0040567:2684-2703 | Msa1459950:intron | 20.0% |
! | GTTAACACATACATAAATTC+TGG | + | tig0040567:2369-2388 | Msa1459950:intron | 25.0% |
! | TTTATAGGAAAATAACAGTG+AGG | - | tig0040567:2435-2454 | None:intergenic | 25.0% |
! | GATCAGTTGAATATCTAATA+AGG | + | tig0040567:2647-2666 | Msa1459950:intron | 25.0% |
! | TCAGTTGAATATCTAATAAG+GGG | + | tig0040567:2649-2668 | Msa1459950:intron | 25.0% |
!! | TTTTCTCTTTATTGTGGATT+AGG | + | tig0040567:2734-2753 | Msa1459950:intron | 25.0% |
! | TATCTCTTGGATTGAAAATT+TGG | + | tig0040567:2828-2847 | Msa1459950:intron | 25.0% |
! | TGTTTCTTATTAAAGGGTTT+AGG | + | tig0040567:2945-2964 | Msa1459950:intron | 25.0% |
! | GAGATTTAACGATAAAGATA+AGG | + | tig0040567:2977-2996 | Msa1459950:intron | 25.0% |
!!! | AAGAGAGGTTTTTTACTAAT+AGG | + | tig0040567:3268-3287 | Msa1459950:intron | 25.0% |
!! | TTTTACTAATAGGAAGCAAA+TGG | + | tig0040567:3278-3297 | Msa1459950:intron | 25.0% |
! | GTTAACACATACATAAATTC+TGG | + | tig0040567:2369-2388 | Msa1459950:intron | 25.0% |
! | TTTATAGGAAAATAACAGTG+AGG | - | tig0040567:2435-2454 | None:intergenic | 25.0% |
! | GATCAGTTGAATATCTAATA+AGG | + | tig0040567:2647-2666 | Msa1459950:intron | 25.0% |
! | TCAGTTGAATATCTAATAAG+GGG | + | tig0040567:2649-2668 | Msa1459950:intron | 25.0% |
!! | TTTTCTCTTTATTGTGGATT+AGG | + | tig0040567:2734-2753 | Msa1459950:intron | 25.0% |
! | TATCTCTTGGATTGAAAATT+TGG | + | tig0040567:2828-2847 | Msa1459950:intron | 25.0% |
! | TGTTTCTTATTAAAGGGTTT+AGG | + | tig0040567:2945-2964 | Msa1459950:intron | 25.0% |
! | GAGATTTAACGATAAAGATA+AGG | + | tig0040567:2977-2996 | Msa1459950:intron | 25.0% |
!!! | AAGAGAGGTTTTTTACTAAT+AGG | + | tig0040567:3268-3287 | Msa1459950:intron | 25.0% |
!! | TTTTACTAATAGGAAGCAAA+TGG | + | tig0040567:3278-3297 | Msa1459950:intron | 25.0% |
AGGAAGATTTGATTATTGTG+TGG | - | tig0040567:2090-2109 | None:intergenic | 30.0% | |
TTTGTTTGTGAGGAGAAAAA+TGG | - | tig0040567:2150-2169 | None:intergenic | 30.0% | |
ACAAAGAAAGAGATAAAGAC+TGG | - | tig0040567:2187-2206 | None:intergenic | 30.0% | |
ATGAGATTCAATTCAGTTGA+AGG | - | tig0040567:2234-2253 | None:intergenic | 30.0% | |
CTTACAAGAAGCAAATAAAG+TGG | - | tig0040567:2273-2292 | None:intergenic | 30.0% | |
CAAAAACACACAAAGAAACA+AGG | - | tig0040567:2326-2345 | None:intergenic | 30.0% | |
!!! | TTTTTTGGAGACATGTGAAT+TGG | + | tig0040567:2493-2512 | Msa1459950:intron | 30.0% |
!! | TTTTTGGAGACATGTGAATT+GGG | + | tig0040567:2494-2513 | Msa1459950:intron | 30.0% |
! | TGAATTGGGTTATTTGCTTT+TGG | + | tig0040567:2508-2527 | Msa1459950:intron | 30.0% |
! | GTGCAAAATTATAGCCTTTT+TGG | + | tig0040567:2530-2549 | Msa1459950:intron | 30.0% |
! | TATCTTCTTTTGGATCATTG+TGG | + | tig0040567:2694-2713 | Msa1459950:intron | 30.0% |
!!! | GTGCTTTTTTCTCTTTATTG+TGG | + | tig0040567:2728-2747 | Msa1459950:intron | 30.0% |
!! | CTTTATTGTGGATTAGGATT+TGG | + | tig0040567:2740-2759 | Msa1459950:intron | 30.0% |
TGGAATAGATTCTTATCTCT+TGG | + | tig0040567:2815-2834 | Msa1459950:intron | 30.0% | |
TATGCAAATACAAAAAGCCA+AGG | - | tig0040567:3314-3333 | None:intergenic | 30.0% | |
TTTGCATATCATAAGTGTAC+TGG | + | tig0040567:3326-3345 | Msa1459950:CDS | 30.0% | |
!! | TTGATCTAACTCACTTTTCT+TGG | + | tig0040567:3369-3388 | Msa1459950:CDS | 30.0% |
GATTGTCAAATTTATGTCGT+AGG | + | tig0040567:4037-4056 | Msa1459950:CDS | 30.0% | |
!!! | AACTTTCTTTTGGTTCAGTA+TGG | - | tig0040567:4095-4114 | None:intergenic | 30.0% |
AGGAAGATTTGATTATTGTG+TGG | - | tig0040567:2090-2109 | None:intergenic | 30.0% | |
TTTGTTTGTGAGGAGAAAAA+TGG | - | tig0040567:2150-2169 | None:intergenic | 30.0% | |
ACAAAGAAAGAGATAAAGAC+TGG | - | tig0040567:2187-2206 | None:intergenic | 30.0% | |
ATGAGATTCAATTCAGTTGA+AGG | - | tig0040567:2234-2253 | None:intergenic | 30.0% | |
CTTACAAGAAGCAAATAAAG+TGG | - | tig0040567:2273-2292 | None:intergenic | 30.0% | |
CAAAAACACACAAAGAAACA+AGG | - | tig0040567:2326-2345 | None:intergenic | 30.0% | |
!!! | TTTTTTGGAGACATGTGAAT+TGG | + | tig0040567:2493-2512 | Msa1459950:intron | 30.0% |
!! | TTTTTGGAGACATGTGAATT+GGG | + | tig0040567:2494-2513 | Msa1459950:intron | 30.0% |
! | TGAATTGGGTTATTTGCTTT+TGG | + | tig0040567:2508-2527 | Msa1459950:intron | 30.0% |
! | GTGCAAAATTATAGCCTTTT+TGG | + | tig0040567:2530-2549 | Msa1459950:intron | 30.0% |
! | TATCTTCTTTTGGATCATTG+TGG | + | tig0040567:2694-2713 | Msa1459950:intron | 30.0% |
!!! | GTGCTTTTTTCTCTTTATTG+TGG | + | tig0040567:2728-2747 | Msa1459950:intron | 30.0% |
!! | CTTTATTGTGGATTAGGATT+TGG | + | tig0040567:2740-2759 | Msa1459950:intron | 30.0% |
TGGAATAGATTCTTATCTCT+TGG | + | tig0040567:2815-2834 | Msa1459950:intron | 30.0% | |
TATGCAAATACAAAAAGCCA+AGG | - | tig0040567:3314-3333 | None:intergenic | 30.0% | |
TTTGCATATCATAAGTGTAC+TGG | + | tig0040567:3326-3345 | Msa1459950:CDS | 30.0% | |
!! | TTGATCTAACTCACTTTTCT+TGG | + | tig0040567:3369-3388 | Msa1459950:CDS | 30.0% |
GATTGTCAAATTTATGTCGT+AGG | + | tig0040567:4037-4056 | Msa1459950:CDS | 30.0% | |
!!! | AACTTTCTTTTGGTTCAGTA+TGG | - | tig0040567:4095-4114 | None:intergenic | 30.0% |
AAGCTAGTAGAGCAGATATA+AGG | - | tig0040567:2060-2079 | None:intergenic | 35.0% | |
!!! | TGAAGACTGTTTTGTTTGTG+AGG | - | tig0040567:2160-2179 | None:intergenic | 35.0% |
AGAAACAAGGTAAAGTGAAG+AGG | - | tig0040567:2313-2332 | None:intergenic | 35.0% | |
CTGAGACTTAAGAACCAAAA+AGG | - | tig0040567:2547-2566 | None:intergenic | 35.0% | |
AAATGTGAGTGTATCAGCTT+AGG | + | tig0040567:2786-2805 | Msa1459950:intron | 35.0% | |
TGTATCAGCTTAGGAGAATT+TGG | + | tig0040567:2795-2814 | Msa1459950:intron | 35.0% | |
CACTATGTTCTCAAATTGGT+TGG | - | tig0040567:2880-2899 | None:intergenic | 35.0% | |
CAACCAATTTGAGAACATAG+TGG | + | tig0040567:2878-2897 | Msa1459950:intron | 35.0% | |
CTTCCACTATGTTCTCAAAT+TGG | - | tig0040567:2884-2903 | None:intergenic | 35.0% | |
CTTAGAGAATGATCTAACTC+TGG | - | tig0040567:3123-3142 | None:intergenic | 35.0% | |
AAGAGAAGAACCCTTAATTC+CGG | + | tig0040567:3140-3159 | Msa1459950:CDS | 35.0% | |
CAATTAAGAGCAACATCATC+AGG | - | tig0040567:3171-3190 | None:intergenic | 35.0% | |
TAATTGTCTTCTTCGTCTTC+CGG | + | tig0040567:3185-3204 | Msa1459950:CDS | 35.0% | |
TTCAAAGTCATTCATCCTGT+AGG | + | tig0040567:3208-3227 | Msa1459950:intron | 35.0% | |
TCAAAGTCATTCATCCTGTA+GGG | + | tig0040567:3209-3228 | Msa1459950:intron | 35.0% | |
! | TGTTACTTGGTAGTAAAGAG+AGG | + | tig0040567:3253-3272 | Msa1459950:intron | 35.0% |
CAAATGGTTTCAAAGATCCT+TGG | + | tig0040567:3294-3313 | Msa1459950:CDS | 35.0% | |
AGTGTACTGGAAAGATTCAA+TGG | + | tig0040567:3339-3358 | Msa1459950:CDS | 35.0% | |
GATGGTAATCTTTACGTATG+CGG | + | tig0040567:3464-3483 | Msa1459950:CDS | 35.0% | |
TATTTCAACACCAAGTCAAG+AGG | - | tig0040567:3515-3534 | None:intergenic | 35.0% | |
ATGAGATCACGAAAAATCGT+TGG | + | tig0040567:3534-3553 | Msa1459950:CDS | 35.0% | |
ACTGATCATTCGATTCATCA+CGG | - | tig0040567:3561-3580 | None:intergenic | 35.0% | |
!! | TAGTACTGATCTTTATGAGC+TGG | + | tig0040567:3640-3659 | Msa1459950:CDS | 35.0% |
TTGTAACAGAAGGATGGTTA+TGG | + | tig0040567:3768-3787 | Msa1459950:CDS | 35.0% | |
GCTCAGAAACAACAAATAAG+TGG | - | tig0040567:3907-3926 | None:intergenic | 35.0% | |
GAAGCTTAAGGTTTATAACC+AGG | + | tig0040567:3937-3956 | Msa1459950:CDS | 35.0% | |
AAAGGTTTGCATATTTGCTC+AGG | - | tig0040567:4001-4020 | None:intergenic | 35.0% | |
TGAACCAAAAGAAAGTTGTG+AGG | + | tig0040567:4098-4117 | Msa1459950:CDS | 35.0% | |
GAACCAAAAGAAAGTTGTGA+GGG | + | tig0040567:4099-4118 | Msa1459950:CDS | 35.0% | |
AACCAAAAGAAAGTTGTGAG+GGG | + | tig0040567:4100-4119 | Msa1459950:CDS | 35.0% | |
AATGGAACTTCAGTGTTCAA+TGG | + | tig0040567:4124-4143 | Msa1459950:CDS | 35.0% | |
AAGCTAGTAGAGCAGATATA+AGG | - | tig0040567:2060-2079 | None:intergenic | 35.0% | |
!!! | TGAAGACTGTTTTGTTTGTG+AGG | - | tig0040567:2160-2179 | None:intergenic | 35.0% |
AGAAACAAGGTAAAGTGAAG+AGG | - | tig0040567:2313-2332 | None:intergenic | 35.0% | |
CTGAGACTTAAGAACCAAAA+AGG | - | tig0040567:2547-2566 | None:intergenic | 35.0% | |
AAATGTGAGTGTATCAGCTT+AGG | + | tig0040567:2786-2805 | Msa1459950:intron | 35.0% | |
TGTATCAGCTTAGGAGAATT+TGG | + | tig0040567:2795-2814 | Msa1459950:intron | 35.0% | |
CACTATGTTCTCAAATTGGT+TGG | - | tig0040567:2880-2899 | None:intergenic | 35.0% | |
CAACCAATTTGAGAACATAG+TGG | + | tig0040567:2878-2897 | Msa1459950:intron | 35.0% | |
CTTCCACTATGTTCTCAAAT+TGG | - | tig0040567:2884-2903 | None:intergenic | 35.0% | |
CTTAGAGAATGATCTAACTC+TGG | - | tig0040567:3123-3142 | None:intergenic | 35.0% | |
AAGAGAAGAACCCTTAATTC+CGG | + | tig0040567:3140-3159 | Msa1459950:CDS | 35.0% | |
CAATTAAGAGCAACATCATC+AGG | - | tig0040567:3171-3190 | None:intergenic | 35.0% | |
TAATTGTCTTCTTCGTCTTC+CGG | + | tig0040567:3185-3204 | Msa1459950:CDS | 35.0% | |
TTCAAAGTCATTCATCCTGT+AGG | + | tig0040567:3208-3227 | Msa1459950:intron | 35.0% | |
TCAAAGTCATTCATCCTGTA+GGG | + | tig0040567:3209-3228 | Msa1459950:intron | 35.0% | |
! | TGTTACTTGGTAGTAAAGAG+AGG | + | tig0040567:3253-3272 | Msa1459950:intron | 35.0% |
CAAATGGTTTCAAAGATCCT+TGG | + | tig0040567:3294-3313 | Msa1459950:CDS | 35.0% | |
AGTGTACTGGAAAGATTCAA+TGG | + | tig0040567:3339-3358 | Msa1459950:CDS | 35.0% | |
GATGGTAATCTTTACGTATG+CGG | + | tig0040567:3464-3483 | Msa1459950:CDS | 35.0% | |
TATTTCAACACCAAGTCAAG+AGG | - | tig0040567:3515-3534 | None:intergenic | 35.0% | |
ATGAGATCACGAAAAATCGT+TGG | + | tig0040567:3534-3553 | Msa1459950:CDS | 35.0% | |
ACTGATCATTCGATTCATCA+CGG | - | tig0040567:3561-3580 | None:intergenic | 35.0% | |
!! | TAGTACTGATCTTTATGAGC+TGG | + | tig0040567:3640-3659 | Msa1459950:CDS | 35.0% |
TTGTAACAGAAGGATGGTTA+TGG | + | tig0040567:3768-3787 | Msa1459950:CDS | 35.0% | |
GCTCAGAAACAACAAATAAG+TGG | - | tig0040567:3907-3926 | None:intergenic | 35.0% | |
GAAGCTTAAGGTTTATAACC+AGG | + | tig0040567:3937-3956 | Msa1459950:CDS | 35.0% | |
AAAGGTTTGCATATTTGCTC+AGG | - | tig0040567:4001-4020 | None:intergenic | 35.0% | |
TGAACCAAAAGAAAGTTGTG+AGG | + | tig0040567:4098-4117 | Msa1459950:CDS | 35.0% | |
GAACCAAAAGAAAGTTGTGA+GGG | + | tig0040567:4099-4118 | Msa1459950:CDS | 35.0% | |
AACCAAAAGAAAGTTGTGAG+GGG | + | tig0040567:4100-4119 | Msa1459950:CDS | 35.0% | |
AATGGAACTTCAGTGTTCAA+TGG | + | tig0040567:4124-4143 | Msa1459950:CDS | 35.0% | |
!!! | CTTCTGGGTGTGTTGTTTTT+TGG | + | tig0040567:2478-2497 | Msa1459950:intron | 40.0% |
!! | CTAGCTTTTTACGAAGTAGC+AGG | + | tig0040567:2582-2601 | Msa1459950:intron | 40.0% |
! | CTTCTTTTGGATCATTGTGG+AGG | + | tig0040567:2697-2716 | Msa1459950:intron | 40.0% |
! | ATTTTCGTCTCAACAAGCAC+CGG | + | tig0040567:3014-3033 | Msa1459950:CDS | 40.0% |
!! | TTGGGAGATAGTGTCATTTG+AGG | - | tig0040567:3057-3076 | None:intergenic | 40.0% |
TGACACTATCTCCCAAGTTT+AGG | + | tig0040567:3061-3080 | Msa1459950:CDS | 40.0% | |
! | ATCTCCCAAGTTTAGGTTAG+CGG | + | tig0040567:3068-3087 | Msa1459950:CDS | 40.0% |
GAATGATCTAACTCTGGCAT+CGG | - | tig0040567:3117-3136 | None:intergenic | 40.0% | |
AGAGAAGAACCCTTAATTCC+GGG | + | tig0040567:3141-3160 | Msa1459950:CDS | 40.0% | |
CAGGATGAATGACTTTGAAC+CGG | - | tig0040567:3207-3226 | None:intergenic | 40.0% | |
AAGAGGTGGCATATGTTACT+TGG | + | tig0040567:3240-3259 | Msa1459950:intron | 40.0% | |
TACTGGAAAGATTCAATGGC+AGG | + | tig0040567:3343-3362 | Msa1459950:CDS | 40.0% | |
! | AGGTTTGTCCTCATGGTTTT+CGG | + | tig0040567:3423-3442 | Msa1459950:CDS | 40.0% |
ACGTAAAGATTACCATCGTG+AGG | - | tig0040567:3461-3480 | None:intergenic | 40.0% | |
TGAATCGAATGATCAGTGCT+AGG | + | tig0040567:3564-3583 | Msa1459950:CDS | 40.0% | |
! | GAGGTATTAGATCCGATTAG+CGG | + | tig0040567:3671-3690 | Msa1459950:CDS | 40.0% |
AGGTATTAGATCCGATTAGC+GGG | + | tig0040567:3672-3691 | Msa1459950:CDS | 40.0% | |
AGCATCATAGGATGCCATAT+TGG | - | tig0040567:3726-3745 | None:intergenic | 40.0% | |
!! | TATGATGCTGCAGTTCTGAA+CGG | + | tig0040567:3737-3756 | Msa1459950:CDS | 40.0% |
AACTGCTTGTAACAGAAGGA+TGG | + | tig0040567:3762-3781 | Msa1459950:CDS | 40.0% | |
! | CCTCTAGGAGAGACATAAAA+AGG | - | tig0040567:3794-3813 | None:intergenic | 40.0% |
! | CCTTTTTATGTCTCTCCTAG+AGG | + | tig0040567:3791-3810 | Msa1459950:CDS | 40.0% |
AACCAATAGCTGGGAAACTA+TGG | + | tig0040567:3832-3851 | Msa1459950:CDS | 40.0% | |
GCTCGAAAGAATGAAGCTTA+AGG | + | tig0040567:3925-3944 | Msa1459950:CDS | 40.0% | |
TGCATATTTGCTCAGGCAAA+GGG | - | tig0040567:3994-4013 | None:intergenic | 40.0% | |
TTGCATATTTGCTCAGGCAA+AGG | - | tig0040567:3995-4014 | None:intergenic | 40.0% | |
TCACAAGCATTCACAGCAAA+AGG | - | tig0040567:4019-4038 | None:intergenic | 40.0% | |
GTCAAATTTATGTCGTAGGC+CGG | + | tig0040567:4041-4060 | Msa1459950:CDS | 40.0% | |
! | TTCCCCTCACAACTTTCTTT+TGG | - | tig0040567:4105-4124 | None:intergenic | 40.0% |
AAGAAAGTTGTGAGGGGAAA+TGG | + | tig0040567:4106-4125 | Msa1459950:CDS | 40.0% | |
!!! | CTTCTGGGTGTGTTGTTTTT+TGG | + | tig0040567:2478-2497 | Msa1459950:intron | 40.0% |
!! | CTAGCTTTTTACGAAGTAGC+AGG | + | tig0040567:2582-2601 | Msa1459950:intron | 40.0% |
! | CTTCTTTTGGATCATTGTGG+AGG | + | tig0040567:2697-2716 | Msa1459950:intron | 40.0% |
! | ATTTTCGTCTCAACAAGCAC+CGG | + | tig0040567:3014-3033 | Msa1459950:CDS | 40.0% |
!! | TTGGGAGATAGTGTCATTTG+AGG | - | tig0040567:3057-3076 | None:intergenic | 40.0% |
TGACACTATCTCCCAAGTTT+AGG | + | tig0040567:3061-3080 | Msa1459950:CDS | 40.0% | |
! | ATCTCCCAAGTTTAGGTTAG+CGG | + | tig0040567:3068-3087 | Msa1459950:CDS | 40.0% |
GAATGATCTAACTCTGGCAT+CGG | - | tig0040567:3117-3136 | None:intergenic | 40.0% | |
AGAGAAGAACCCTTAATTCC+GGG | + | tig0040567:3141-3160 | Msa1459950:CDS | 40.0% | |
CAGGATGAATGACTTTGAAC+CGG | - | tig0040567:3207-3226 | None:intergenic | 40.0% | |
AAGAGGTGGCATATGTTACT+TGG | + | tig0040567:3240-3259 | Msa1459950:intron | 40.0% | |
TACTGGAAAGATTCAATGGC+AGG | + | tig0040567:3343-3362 | Msa1459950:CDS | 40.0% | |
! | AGGTTTGTCCTCATGGTTTT+CGG | + | tig0040567:3423-3442 | Msa1459950:CDS | 40.0% |
ACGTAAAGATTACCATCGTG+AGG | - | tig0040567:3461-3480 | None:intergenic | 40.0% | |
TGAATCGAATGATCAGTGCT+AGG | + | tig0040567:3564-3583 | Msa1459950:CDS | 40.0% | |
! | GAGGTATTAGATCCGATTAG+CGG | + | tig0040567:3671-3690 | Msa1459950:CDS | 40.0% |
AGGTATTAGATCCGATTAGC+GGG | + | tig0040567:3672-3691 | Msa1459950:CDS | 40.0% | |
AGCATCATAGGATGCCATAT+TGG | - | tig0040567:3726-3745 | None:intergenic | 40.0% | |
!! | TATGATGCTGCAGTTCTGAA+CGG | + | tig0040567:3737-3756 | Msa1459950:CDS | 40.0% |
AACTGCTTGTAACAGAAGGA+TGG | + | tig0040567:3762-3781 | Msa1459950:CDS | 40.0% | |
! | CCTCTAGGAGAGACATAAAA+AGG | - | tig0040567:3794-3813 | None:intergenic | 40.0% |
! | CCTTTTTATGTCTCTCCTAG+AGG | + | tig0040567:3791-3810 | Msa1459950:CDS | 40.0% |
AACCAATAGCTGGGAAACTA+TGG | + | tig0040567:3832-3851 | Msa1459950:CDS | 40.0% | |
GCTCGAAAGAATGAAGCTTA+AGG | + | tig0040567:3925-3944 | Msa1459950:CDS | 40.0% | |
TGCATATTTGCTCAGGCAAA+GGG | - | tig0040567:3994-4013 | None:intergenic | 40.0% | |
TTGCATATTTGCTCAGGCAA+AGG | - | tig0040567:3995-4014 | None:intergenic | 40.0% | |
TCACAAGCATTCACAGCAAA+AGG | - | tig0040567:4019-4038 | None:intergenic | 40.0% | |
GTCAAATTTATGTCGTAGGC+CGG | + | tig0040567:4041-4060 | Msa1459950:CDS | 40.0% | |
! | TTCCCCTCACAACTTTCTTT+TGG | - | tig0040567:4105-4124 | None:intergenic | 40.0% |
AAGAAAGTTGTGAGGGGAAA+TGG | + | tig0040567:4106-4125 | Msa1459950:CDS | 40.0% | |
! | CTTTTGGATCATTGTGGAGG+AGG | + | tig0040567:2700-2719 | Msa1459950:intron | 45.0% |
GATCATTGTGGAGGAGGAAT+TGG | + | tig0040567:2706-2725 | Msa1459950:intron | 45.0% | |
ACCACCGCTAACCTAAACTT+GGG | - | tig0040567:3075-3094 | None:intergenic | 45.0% | |
AACCACCGCTAACCTAAACT+TGG | - | tig0040567:3076-3095 | None:intergenic | 45.0% | |
TCAGGTAAGCCCGGAATTAA+GGG | - | tig0040567:3153-3172 | None:intergenic | 45.0% | |
ATCAGGTAAGCCCGGAATTA+AGG | - | tig0040567:3154-3173 | None:intergenic | 45.0% | |
AAGGACAAGGTTTGTCCTCA+TGG | + | tig0040567:3416-3435 | Msa1459950:CDS | 45.0% | |
GAAACACACCGAAAACCATG+AGG | - | tig0040567:3434-3453 | None:intergenic | 45.0% | |
GGTAATCTTTACGTATGCGG+TGG | + | tig0040567:3467-3486 | Msa1459950:CDS | 45.0% | |
!!! | GCTAGGTCATTTTTTGCCAG+TGG | + | tig0040567:3581-3600 | Msa1459950:CDS | 45.0% |
TTTGCCAGTGGAGTAATCGA+TGG | + | tig0040567:3593-3612 | Msa1459950:CDS | 45.0% | |
TTGCCAGTGGAGTAATCGAT+GGG | + | tig0040567:3594-3613 | Msa1459950:CDS | 45.0% | |
ATGGGATGGTTTATGCAGCT+GGG | + | tig0040567:3612-3631 | Msa1459950:CDS | 45.0% | |
TTATGAGCTGGATTCAGCTG+AGG | + | tig0040567:3652-3671 | Msa1459950:CDS | 45.0% | |
TAGATCCGATTAGCGGGAAT+TGG | + | tig0040567:3678-3697 | Msa1459950:CDS | 45.0% | |
TGCCAACATGGGAACCAATA+TGG | + | tig0040567:3709-3728 | Msa1459950:CDS | 45.0% | |
!! | TGCCATATTGGTTCCCATGT+TGG | - | tig0040567:3714-3733 | None:intergenic | 45.0% |
GTTCAGAACTGCAGCATCAT+AGG | - | tig0040567:3738-3757 | None:intergenic | 45.0% | |
!! | ATGATGCTGCAGTTCTGAAC+GGG | + | tig0040567:3738-3757 | Msa1459950:CDS | 45.0% |
GGGAAACTGCTTGTAACAGA+AGG | + | tig0040567:3758-3777 | Msa1459950:CDS | 45.0% | |
TTATGTCTCTCCTAGAGGAC+AGG | + | tig0040567:3796-3815 | Msa1459950:CDS | 45.0% | |
!! | GTTTCCCAGCTATTGGTTCT+CGG | - | tig0040567:3830-3849 | None:intergenic | 45.0% |
AGCCATAGTTTCCCAGCTAT+TGG | - | tig0040567:3837-3856 | None:intergenic | 45.0% | |
ATGGCTGTTGGACTTAGAGA+AGG | + | tig0040567:3851-3870 | Msa1459950:CDS | 45.0% | |
TGGCTGTTGGACTTAGAGAA+GGG | + | tig0040567:3852-3871 | Msa1459950:CDS | 45.0% | |
GGTTCAAGCGTGGTTGTTTA+TGG | + | tig0040567:3881-3900 | Msa1459950:CDS | 45.0% | |
ATCTATGGCTTCCCAGGAAT+CGG | - | tig0040567:3966-3985 | None:intergenic | 45.0% | |
GCATATTTGCTCAGGCAAAG+GGG | - | tig0040567:3993-4012 | None:intergenic | 45.0% | |
CAACAGCAACCAGAAGATTC+CGG | - | tig0040567:4063-4082 | None:intergenic | 45.0% | |
! | CTTTTGGATCATTGTGGAGG+AGG | + | tig0040567:2700-2719 | Msa1459950:intron | 45.0% |
GATCATTGTGGAGGAGGAAT+TGG | + | tig0040567:2706-2725 | Msa1459950:intron | 45.0% | |
ACCACCGCTAACCTAAACTT+GGG | - | tig0040567:3075-3094 | None:intergenic | 45.0% | |
AACCACCGCTAACCTAAACT+TGG | - | tig0040567:3076-3095 | None:intergenic | 45.0% | |
TCAGGTAAGCCCGGAATTAA+GGG | - | tig0040567:3153-3172 | None:intergenic | 45.0% | |
ATCAGGTAAGCCCGGAATTA+AGG | - | tig0040567:3154-3173 | None:intergenic | 45.0% | |
AAGGACAAGGTTTGTCCTCA+TGG | + | tig0040567:3416-3435 | Msa1459950:CDS | 45.0% | |
GAAACACACCGAAAACCATG+AGG | - | tig0040567:3434-3453 | None:intergenic | 45.0% | |
GGTAATCTTTACGTATGCGG+TGG | + | tig0040567:3467-3486 | Msa1459950:CDS | 45.0% | |
!!! | GCTAGGTCATTTTTTGCCAG+TGG | + | tig0040567:3581-3600 | Msa1459950:CDS | 45.0% |
TTTGCCAGTGGAGTAATCGA+TGG | + | tig0040567:3593-3612 | Msa1459950:CDS | 45.0% | |
TTGCCAGTGGAGTAATCGAT+GGG | + | tig0040567:3594-3613 | Msa1459950:CDS | 45.0% | |
ATGGGATGGTTTATGCAGCT+GGG | + | tig0040567:3612-3631 | Msa1459950:CDS | 45.0% | |
TTATGAGCTGGATTCAGCTG+AGG | + | tig0040567:3652-3671 | Msa1459950:CDS | 45.0% | |
TAGATCCGATTAGCGGGAAT+TGG | + | tig0040567:3678-3697 | Msa1459950:CDS | 45.0% | |
TGCCAACATGGGAACCAATA+TGG | + | tig0040567:3709-3728 | Msa1459950:CDS | 45.0% | |
!! | TGCCATATTGGTTCCCATGT+TGG | - | tig0040567:3714-3733 | None:intergenic | 45.0% |
GTTCAGAACTGCAGCATCAT+AGG | - | tig0040567:3738-3757 | None:intergenic | 45.0% | |
!! | ATGATGCTGCAGTTCTGAAC+GGG | + | tig0040567:3738-3757 | Msa1459950:CDS | 45.0% |
GGGAAACTGCTTGTAACAGA+AGG | + | tig0040567:3758-3777 | Msa1459950:CDS | 45.0% | |
TTATGTCTCTCCTAGAGGAC+AGG | + | tig0040567:3796-3815 | Msa1459950:CDS | 45.0% | |
!! | GTTTCCCAGCTATTGGTTCT+CGG | - | tig0040567:3830-3849 | None:intergenic | 45.0% |
AGCCATAGTTTCCCAGCTAT+TGG | - | tig0040567:3837-3856 | None:intergenic | 45.0% | |
ATGGCTGTTGGACTTAGAGA+AGG | + | tig0040567:3851-3870 | Msa1459950:CDS | 45.0% | |
TGGCTGTTGGACTTAGAGAA+GGG | + | tig0040567:3852-3871 | Msa1459950:CDS | 45.0% | |
GGTTCAAGCGTGGTTGTTTA+TGG | + | tig0040567:3881-3900 | Msa1459950:CDS | 45.0% | |
ATCTATGGCTTCCCAGGAAT+CGG | - | tig0040567:3966-3985 | None:intergenic | 45.0% | |
GCATATTTGCTCAGGCAAAG+GGG | - | tig0040567:3993-4012 | None:intergenic | 45.0% | |
CAACAGCAACCAGAAGATTC+CGG | - | tig0040567:4063-4082 | None:intergenic | 45.0% | |
! | GGATCACCTAGCTTGTGAAC+CGG | - | tig0040567:3036-3055 | None:intergenic | 50.0% |
! | TCCCAAGTTTAGGTTAGCGG+TGG | + | tig0040567:3071-3090 | Msa1459950:CDS | 50.0% |
GCAACATCATCAGGTAAGCC+CGG | - | tig0040567:3162-3181 | None:intergenic | 50.0% | |
!! | TGTCCTTGCAAGGCATTGCA+GGG | - | tig0040567:3403-3422 | None:intergenic | 50.0% |
!! | TTGTCCTTGCAAGGCATTGC+AGG | - | tig0040567:3404-3423 | None:intergenic | 50.0% |
TGCAATGCCTTGCAAGGACA+AGG | + | tig0040567:3403-3422 | Msa1459950:CDS | 50.0% | |
GGACAAACCTTGTCCTTGCA+AGG | - | tig0040567:3413-3432 | None:intergenic | 50.0% | |
TGTGTTTCGATGCCTCACGA+TGG | + | tig0040567:3446-3465 | Msa1459950:CDS | 50.0% | |
TCTTTACGTATGCGGTGGCA+TGG | + | tig0040567:3472-3491 | Msa1459950:CDS | 50.0% | |
! | CGTGGATTGTCCTCTTGACT+TGG | + | tig0040567:3502-3521 | Msa1459950:CDS | 50.0% |
! | CATCCCATCGATTACTCCAC+TGG | - | tig0040567:3600-3619 | None:intergenic | 50.0% |
CAGTGGAGTAATCGATGGGA+TGG | + | tig0040567:3598-3617 | Msa1459950:CDS | 50.0% | |
GATGGGATGGTTTATGCAGC+TGG | + | tig0040567:3611-3630 | Msa1459950:CDS | 50.0% | |
TGGGATGGTTTATGCAGCTG+GGG | + | tig0040567:3613-3632 | Msa1459950:CDS | 50.0% | |
ACGATCCGAGAACCAATAGC+TGG | + | tig0040567:3822-3841 | Msa1459950:CDS | 50.0% | |
CGATCCGAGAACCAATAGCT+GGG | + | tig0040567:3823-3842 | Msa1459950:CDS | 50.0% | |
AGCTGGGAAACTATGGCTGT+TGG | + | tig0040567:3839-3858 | Msa1459950:CDS | 50.0% | |
CTGTTGGACTTAGAGAAGGG+TGG | + | tig0040567:3855-3874 | Msa1459950:CDS | 50.0% | |
! | ATAACCAGGAAGCCGATTCC+TGG | + | tig0040567:3951-3970 | Msa1459950:CDS | 50.0% |
! | TAACCAGGAAGCCGATTCCT+GGG | + | tig0040567:3952-3971 | Msa1459950:CDS | 50.0% |
GATTCCTGGGAAGCCATAGA+TGG | + | tig0040567:3965-3984 | Msa1459950:CDS | 50.0% | |
! | CGGAATCTTCTGGTTGCTGT+TGG | + | tig0040567:4061-4080 | Msa1459950:CDS | 50.0% |
! | GGATCACCTAGCTTGTGAAC+CGG | - | tig0040567:3036-3055 | None:intergenic | 50.0% |
! | TCCCAAGTTTAGGTTAGCGG+TGG | + | tig0040567:3071-3090 | Msa1459950:CDS | 50.0% |
GCAACATCATCAGGTAAGCC+CGG | - | tig0040567:3162-3181 | None:intergenic | 50.0% | |
!! | TGTCCTTGCAAGGCATTGCA+GGG | - | tig0040567:3403-3422 | None:intergenic | 50.0% |
!! | TTGTCCTTGCAAGGCATTGC+AGG | - | tig0040567:3404-3423 | None:intergenic | 50.0% |
TGCAATGCCTTGCAAGGACA+AGG | + | tig0040567:3403-3422 | Msa1459950:CDS | 50.0% | |
GGACAAACCTTGTCCTTGCA+AGG | - | tig0040567:3413-3432 | None:intergenic | 50.0% | |
TGTGTTTCGATGCCTCACGA+TGG | + | tig0040567:3446-3465 | Msa1459950:CDS | 50.0% | |
TCTTTACGTATGCGGTGGCA+TGG | + | tig0040567:3472-3491 | Msa1459950:CDS | 50.0% | |
! | CGTGGATTGTCCTCTTGACT+TGG | + | tig0040567:3502-3521 | Msa1459950:CDS | 50.0% |
! | CATCCCATCGATTACTCCAC+TGG | - | tig0040567:3600-3619 | None:intergenic | 50.0% |
CAGTGGAGTAATCGATGGGA+TGG | + | tig0040567:3598-3617 | Msa1459950:CDS | 50.0% | |
GATGGGATGGTTTATGCAGC+TGG | + | tig0040567:3611-3630 | Msa1459950:CDS | 50.0% | |
TGGGATGGTTTATGCAGCTG+GGG | + | tig0040567:3613-3632 | Msa1459950:CDS | 50.0% | |
ACGATCCGAGAACCAATAGC+TGG | + | tig0040567:3822-3841 | Msa1459950:CDS | 50.0% | |
CGATCCGAGAACCAATAGCT+GGG | + | tig0040567:3823-3842 | Msa1459950:CDS | 50.0% | |
AGCTGGGAAACTATGGCTGT+TGG | + | tig0040567:3839-3858 | Msa1459950:CDS | 50.0% | |
CTGTTGGACTTAGAGAAGGG+TGG | + | tig0040567:3855-3874 | Msa1459950:CDS | 50.0% | |
! | ATAACCAGGAAGCCGATTCC+TGG | + | tig0040567:3951-3970 | Msa1459950:CDS | 50.0% |
! | TAACCAGGAAGCCGATTCCT+GGG | + | tig0040567:3952-3971 | Msa1459950:CDS | 50.0% |
GATTCCTGGGAAGCCATAGA+TGG | + | tig0040567:3965-3984 | Msa1459950:CDS | 50.0% | |
! | CGGAATCTTCTGGTTGCTGT+TGG | + | tig0040567:4061-4080 | Msa1459950:CDS | 50.0% |
!! | CAAGCACCGGTTCACAAGCT+AGG | + | tig0040567:3027-3046 | Msa1459950:CDS | 55.0% |
!! | CTTGCAAGGCATTGCAGGGA+TGG | - | tig0040567:3399-3418 | None:intergenic | 55.0% |
CATCCCTGCAATGCCTTGCA+AGG | + | tig0040567:3397-3416 | Msa1459950:CDS | 55.0% | |
GGGATGGTTTATGCAGCTGG+GGG | + | tig0040567:3614-3633 | Msa1459950:CDS | 55.0% | |
GGATGGTTTATGCAGCTGGG+GGG | + | tig0040567:3615-3634 | Msa1459950:CDS | 55.0% | |
TTGGCGCGCTATTGCCAACA+TGG | + | tig0040567:3697-3716 | Msa1459950:CDS | 55.0% | |
TGGCGCGCTATTGCCAACAT+GGG | + | tig0040567:3698-3717 | Msa1459950:CDS | 55.0% | |
GGATCGTAGACCTGTCCTCT+AGG | - | tig0040567:3809-3828 | None:intergenic | 55.0% | |
GGACTTAGAGAAGGGTGGAC+TGG | + | tig0040567:3860-3879 | Msa1459950:CDS | 55.0% | |
AGGCAAAGGGGAGCCATCTA+TGG | - | tig0040567:3981-4000 | None:intergenic | 55.0% | |
TGTCGTAGGCCGGAATCTTC+TGG | + | tig0040567:4051-4070 | Msa1459950:CDS | 55.0% | |
!! | CAAGCACCGGTTCACAAGCT+AGG | + | tig0040567:3027-3046 | Msa1459950:CDS | 55.0% |
!! | CTTGCAAGGCATTGCAGGGA+TGG | - | tig0040567:3399-3418 | None:intergenic | 55.0% |
CATCCCTGCAATGCCTTGCA+AGG | + | tig0040567:3397-3416 | Msa1459950:CDS | 55.0% | |
GGGATGGTTTATGCAGCTGG+GGG | + | tig0040567:3614-3633 | Msa1459950:CDS | 55.0% | |
GGATGGTTTATGCAGCTGGG+GGG | + | tig0040567:3615-3634 | Msa1459950:CDS | 55.0% | |
TTGGCGCGCTATTGCCAACA+TGG | + | tig0040567:3697-3716 | Msa1459950:CDS | 55.0% | |
TGGCGCGCTATTGCCAACAT+GGG | + | tig0040567:3698-3717 | Msa1459950:CDS | 55.0% | |
GGATCGTAGACCTGTCCTCT+AGG | - | tig0040567:3809-3828 | None:intergenic | 55.0% | |
GGACTTAGAGAAGGGTGGAC+TGG | + | tig0040567:3860-3879 | Msa1459950:CDS | 55.0% | |
AGGCAAAGGGGAGCCATCTA+TGG | - | tig0040567:3981-4000 | None:intergenic | 55.0% | |
TGTCGTAGGCCGGAATCTTC+TGG | + | tig0040567:4051-4070 | Msa1459950:CDS | 55.0% | |
CCTCTTGCAGACAGCCCTAC+AGG | - | tig0040567:3226-3245 | None:intergenic | 60.0% | |
CCTGTAGGGCTGTCTGCAAG+AGG | + | tig0040567:3223-3242 | Msa1459950:intron | 60.0% | |
GTAGGGCTGTCTGCAAGAGG+TGG | + | tig0040567:3226-3245 | Msa1459950:intron | 60.0% | |
GCGCGCCAATTCCCGCTAAT+CGG | - | tig0040567:3686-3705 | None:intergenic | 60.0% | |
!! | AGGGTGGACTGGTTCAAGCG+TGG | + | tig0040567:3871-3890 | Msa1459950:CDS | 60.0% |
! | CTTCCCAGGAATCGGCTTCC+TGG | - | tig0040567:3958-3977 | None:intergenic | 60.0% |
GGAGCCATCTATGGCTTCCC+AGG | - | tig0040567:3972-3991 | None:intergenic | 60.0% | |
CCTCTTGCAGACAGCCCTAC+AGG | - | tig0040567:3226-3245 | None:intergenic | 60.0% | |
CCTGTAGGGCTGTCTGCAAG+AGG | + | tig0040567:3223-3242 | Msa1459950:intron | 60.0% | |
GTAGGGCTGTCTGCAAGAGG+TGG | + | tig0040567:3226-3245 | Msa1459950:intron | 60.0% | |
GCGCGCCAATTCCCGCTAAT+CGG | - | tig0040567:3686-3705 | None:intergenic | 60.0% | |
!! | AGGGTGGACTGGTTCAAGCG+TGG | + | tig0040567:3871-3890 | Msa1459950:CDS | 60.0% |
! | CTTCCCAGGAATCGGCTTCC+TGG | - | tig0040567:3958-3977 | None:intergenic | 60.0% |
GGAGCCATCTATGGCTTCCC+AGG | - | tig0040567:3972-3991 | None:intergenic | 60.0% | |
CGGTGGCATGGTCTCTGACG+TGG | + | tig0040567:3484-3503 | Msa1459950:CDS | 65.0% | |
CGGTGGCATGGTCTCTGACG+TGG | + | tig0040567:3484-3503 | Msa1459950:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0040567 | gene | 2039 | 4153 | 2039 | ID=Msa1459950;Name=Msa1459950 |
tig0040567 | mRNA | 2039 | 4153 | 2039 | ID=Msa1459950-mRNA-1;Parent=Msa1459950;Name=Msa1459950-mRNA-1;_AED=0.19;_eAED=0.20;_QI=0|0|0|0.8|1|1|5|0|370 |
tig0040567 | exon | 2039 | 2047 | 2039 | ID=Msa1459950-mRNA-1:exon:22492;Parent=Msa1459950-mRNA-1 |
tig0040567 | exon | 2756 | 2761 | 2756 | ID=Msa1459950-mRNA-1:exon:22493;Parent=Msa1459950-mRNA-1 |
tig0040567 | exon | 2960 | 2966 | 2960 | ID=Msa1459950-mRNA-1:exon:22494;Parent=Msa1459950-mRNA-1 |
tig0040567 | exon | 2980 | 3206 | 2980 | ID=Msa1459950-mRNA-1:exon:22495;Parent=Msa1459950-mRNA-1 |
tig0040567 | exon | 3290 | 4153 | 3290 | ID=Msa1459950-mRNA-1:exon:22496;Parent=Msa1459950-mRNA-1 |
tig0040567 | CDS | 2039 | 2047 | 2039 | ID=Msa1459950-mRNA-1:cds;Parent=Msa1459950-mRNA-1 |
tig0040567 | CDS | 2756 | 2761 | 2756 | ID=Msa1459950-mRNA-1:cds;Parent=Msa1459950-mRNA-1 |
tig0040567 | CDS | 2960 | 2966 | 2960 | ID=Msa1459950-mRNA-1:cds;Parent=Msa1459950-mRNA-1 |
tig0040567 | CDS | 2980 | 3206 | 2980 | ID=Msa1459950-mRNA-1:cds;Parent=Msa1459950-mRNA-1 |
tig0040567 | CDS | 3290 | 4153 | 3290 | ID=Msa1459950-mRNA-1:cds;Parent=Msa1459950-mRNA-1 |
Gene Sequence |
Protein sequence |