Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504240 | XP_013460157.1 | 98.452 | 323 | 3 | 2 | 1 | 322 | 1 | 322 | 0.0 | 661 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504240 | sp|Q8S9H7|DIV_ANTMA | 58.075 | 322 | 101 | 12 | 5 | 314 | 1 | 300 | 3.94e-115 | 338 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504240 | A0A072UYJ1 | 98.452 | 323 | 3 | 2 | 1 | 322 | 1 | 322 | 0.0 | 661 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0504240 | TF | MYB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0172350 | Msa0504240 | 0.802309 | 5.963620e-49 | -8.615850e-47 |
| Msa0189950 | Msa0504240 | 0.800790 | 1.221891e-48 | -8.615850e-47 |
| Msa0377530 | Msa0504240 | 0.836109 | 1.134594e-56 | -8.615850e-47 |
| Msa0393680 | Msa0504240 | 0.814563 | 1.445450e-51 | -8.615850e-47 |
| Msa0412440 | Msa0504240 | 0.869191 | 3.723675e-66 | -8.615850e-47 |
| Msa0423040 | Msa0504240 | 0.801669 | 8.072499e-49 | -8.615850e-47 |
| Msa0426810 | Msa0504240 | 0.825136 | 5.526982e-54 | -8.615850e-47 |
| Msa0456910 | Msa0504240 | 0.866526 | 2.674015e-65 | -8.615850e-47 |
| Msa0242680 | Msa0504240 | 0.811258 | 7.658234e-51 | -8.615850e-47 |
| Msa0268090 | Msa0504240 | 0.813930 | 1.994153e-51 | -8.615850e-47 |
| Msa0311860 | Msa0504240 | 0.800419 | 1.453913e-48 | -8.615850e-47 |
| Msa0504240 | Msa0517490 | 0.840250 | 9.734995e-58 | -8.615850e-47 |
| Msa0504240 | Msa0567020 | 0.826660 | 2.401286e-54 | -8.615850e-47 |
| Msa0504240 | Msa0658570 | 0.813208 | 2.876032e-51 | -8.615850e-47 |
| Msa0504240 | Msa0703490 | 0.817026 | 4.081335e-52 | -8.615850e-47 |
| Msa0504240 | Msa0743680 | 0.831745 | 1.402334e-55 | -8.615850e-47 |
| Msa0504240 | Msa0754720 | -0.810554 | 1.088164e-50 | -8.615850e-47 |
| Msa0504240 | Msa0784620 | 0.809313 | 2.012891e-50 | -8.615850e-47 |
| Msa0504240 | Msa0863800 | 0.813646 | 2.303769e-51 | -8.615850e-47 |
| Msa0504240 | Msa0866120 | 0.809223 | 2.104074e-50 | -8.615850e-47 |
| Msa0504240 | Msa0881480 | 0.802387 | 5.746407e-49 | -8.615850e-47 |
| Msa0504240 | Msa1040120 | 0.808748 | 2.659625e-50 | -8.615850e-47 |
| Msa0504240 | Msa1077670 | 0.817595 | 3.039699e-52 | -8.615850e-47 |
| Msa0504240 | Msa1085300 | 0.820315 | 7.318239e-53 | -8.615850e-47 |
| Msa0504240 | Msa1214480 | 0.800737 | 1.252630e-48 | -8.615850e-47 |
| Msa0504240 | Msa1219810 | 0.814369 | 1.595374e-51 | -8.615850e-47 |
| Msa0504240 | Msa1267060 | 0.821803 | 3.324883e-53 | -8.615850e-47 |
| Msa0504240 | Msa1376890 | 0.820052 | 8.410274e-53 | -8.615850e-47 |
| Msa0504240 | Msa1398860 | 0.817159 | 3.810128e-52 | -8.615850e-47 |
| Msa0504240 | Msa1401530 | 0.814713 | 1.338994e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504240 | MtrunA17_Chr3g0104071 | 98.452 | 323 | 3 | 2 | 1 | 322 | 1 | 322 | 0.0 | 661 |
| Msa0504240 | MtrunA17_Chr5g0429521 | 67.173 | 329 | 79 | 9 | 1 | 322 | 1 | 307 | 2.04e-149 | 422 |
| Msa0504240 | MtrunA17_Chr7g0241761 | 54.321 | 324 | 113 | 11 | 5 | 316 | 11 | 311 | 6.16e-105 | 309 |
| Msa0504240 | MtrunA17_Chr5g0436501 | 64.975 | 197 | 55 | 4 | 27 | 221 | 16 | 200 | 1.76e-82 | 250 |
| Msa0504240 | MtrunA17_Chr1g0162081 | 51.813 | 193 | 86 | 2 | 35 | 221 | 4 | 195 | 1.26e-60 | 195 |
| Msa0504240 | MtrunA17_Chr1g0210471 | 45.528 | 246 | 110 | 7 | 41 | 285 | 22 | 244 | 2.69e-59 | 190 |
| Msa0504240 | MtrunA17_Chr4g0062741 | 46.667 | 210 | 75 | 4 | 43 | 221 | 8 | 211 | 3.15e-52 | 174 |
| Msa0504240 | MtrunA17_Chr8g0365011 | 38.776 | 196 | 85 | 4 | 40 | 221 | 5 | 179 | 1.06e-36 | 133 |
| Msa0504240 | MtrunA17_Chr2g0331031 | 48.322 | 149 | 59 | 5 | 143 | 274 | 104 | 251 | 6.28e-33 | 124 |
| Msa0504240 | MtrunA17_Chr4g0055931 | 60.000 | 100 | 38 | 1 | 122 | 221 | 71 | 168 | 4.91e-32 | 121 |
| Msa0504240 | MtrunA17_Chr6g0488471 | 73.611 | 72 | 19 | 0 | 142 | 213 | 91 | 162 | 3.89e-31 | 118 |
| Msa0504240 | MtrunA17_Chr8g0389241 | 70.270 | 74 | 21 | 1 | 140 | 213 | 97 | 169 | 2.93e-30 | 115 |
| Msa0504240 | MtrunA17_Chr5g0415191 | 68.966 | 87 | 25 | 1 | 135 | 221 | 91 | 175 | 4.36e-30 | 116 |
| Msa0504240 | MtrunA17_Chr4g0059701 | 61.702 | 94 | 32 | 1 | 136 | 229 | 72 | 161 | 1.40e-28 | 111 |
| Msa0504240 | MtrunA17_Chr3g0092621 | 53.846 | 91 | 39 | 1 | 148 | 238 | 84 | 171 | 3.19e-25 | 99.8 |
| Msa0504240 | MtrunA17_Chr5g0440731 | 50.980 | 102 | 44 | 3 | 118 | 216 | 77 | 175 | 1.92e-24 | 100 |
| Msa0504240 | MtrunA17_Chr8g0364741 | 37.778 | 135 | 71 | 2 | 35 | 165 | 2 | 127 | 2.59e-24 | 95.9 |
| Msa0504240 | MtrunA17_Chr5g0440741 | 65.714 | 70 | 20 | 2 | 150 | 216 | 102 | 170 | 1.45e-23 | 98.2 |
| Msa0504240 | MtrunA17_Chr3g0135671 | 58.025 | 81 | 27 | 2 | 145 | 218 | 88 | 168 | 1.56e-23 | 96.7 |
| Msa0504240 | MtrunA17_Chr5g0409841 | 61.333 | 75 | 26 | 2 | 144 | 216 | 88 | 161 | 1.36e-22 | 94.4 |
| Msa0504240 | MtrunA17_Chr5g0432921 | 36.000 | 175 | 88 | 5 | 35 | 204 | 13 | 168 | 1.65e-22 | 94.0 |
| Msa0504240 | MtrunA17_Chr5g0432941 | 35.263 | 190 | 90 | 8 | 20 | 204 | 7 | 168 | 4.72e-22 | 92.4 |
| Msa0504240 | MtrunA17_Chr6g0452791 | 77.083 | 48 | 11 | 0 | 148 | 195 | 80 | 127 | 2.23e-20 | 86.7 |
| Msa0504240 | MtrunA17_Chr5g0409831 | 60.526 | 76 | 27 | 1 | 144 | 216 | 73 | 148 | 2.38e-20 | 88.2 |
| Msa0504240 | MtrunA17_Chr5g0404101 | 50.000 | 68 | 34 | 0 | 38 | 105 | 14 | 81 | 1.20e-19 | 82.4 |
| Msa0504240 | MtrunA17_Chr3g0144631 | 57.576 | 66 | 28 | 0 | 43 | 108 | 16 | 81 | 1.34e-19 | 81.6 |
| Msa0504240 | MtrunA17_Chr1g0155181 | 52.857 | 70 | 33 | 0 | 40 | 109 | 4 | 73 | 2.07e-19 | 81.3 |
| Msa0504240 | MtrunA17_Chr3g0141601 | 48.052 | 77 | 40 | 0 | 40 | 116 | 4 | 80 | 7.80e-19 | 80.1 |
| Msa0504240 | MtrunA17_Chr8g0373111 | 52.778 | 72 | 33 | 1 | 40 | 111 | 2 | 72 | 8.15e-19 | 79.3 |
| Msa0504240 | MtrunA17_Chr8g0373121 | 52.778 | 72 | 33 | 1 | 40 | 111 | 2 | 72 | 8.15e-19 | 79.3 |
| Msa0504240 | MtrunA17_Chr8g0373131 | 54.412 | 68 | 30 | 1 | 40 | 107 | 2 | 68 | 9.36e-19 | 79.3 |
| Msa0504240 | MtrunA17_Chr8g0364731 | 61.194 | 67 | 24 | 1 | 157 | 221 | 10 | 76 | 1.02e-18 | 82.4 |
| Msa0504240 | MtrunA17_Chr6g0449111 | 49.254 | 67 | 34 | 0 | 40 | 106 | 7 | 73 | 7.30e-16 | 71.6 |
| Msa0504240 | MtrunA17_Chr5g0404301 | 55.738 | 61 | 26 | 1 | 43 | 103 | 4 | 63 | 1.98e-15 | 70.1 |
| Msa0504240 | MtrunA17_Chr8g0373101 | 52.174 | 69 | 31 | 2 | 43 | 111 | 5 | 71 | 2.24e-15 | 70.1 |
| Msa0504240 | MtrunA17_Chr3g0081631 | 50.704 | 71 | 34 | 1 | 36 | 105 | 3 | 73 | 1.12e-14 | 68.6 |
| Msa0504240 | MtrunA17_Chr7g0255841 | 52.308 | 65 | 31 | 0 | 47 | 111 | 16 | 80 | 2.05e-14 | 68.2 |
| Msa0504240 | MtrunA17_Chr3g0113121 | 50.667 | 75 | 30 | 1 | 150 | 217 | 97 | 171 | 3.06e-14 | 70.9 |
| Msa0504240 | MtrunA17_Chr1g0192061 | 52.113 | 71 | 29 | 2 | 150 | 216 | 63 | 132 | 1.86e-13 | 67.8 |
| Msa0504240 | MtrunA17_Chr8g0370121 | 43.056 | 72 | 36 | 2 | 145 | 212 | 97 | 167 | 1.25e-11 | 63.5 |
| Msa0504240 | MtrunA17_Chr3g0141641 | 41.667 | 72 | 42 | 0 | 43 | 114 | 3 | 74 | 1.71e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0504240 | AT5G58900.1 | 69.500 | 200 | 52 | 3 | 27 | 219 | 15 | 212 | 2.45e-96 | 287 |
| Msa0504240 | AT2G38090.1 | 62.332 | 223 | 57 | 4 | 5 | 217 | 5 | 210 | 3.78e-95 | 284 |
| Msa0504240 | AT5G05790.2 | 63.874 | 191 | 62 | 3 | 39 | 228 | 27 | 211 | 6.14e-79 | 242 |
| Msa0504240 | AT5G05790.1 | 63.874 | 191 | 62 | 3 | 39 | 228 | 27 | 211 | 6.14e-79 | 242 |
| Msa0504240 | AT3G11280.2 | 55.000 | 240 | 83 | 6 | 43 | 270 | 33 | 259 | 4.47e-78 | 239 |
| Msa0504240 | AT3G11280.1 | 55.000 | 240 | 83 | 6 | 43 | 270 | 33 | 259 | 4.47e-78 | 239 |
| Msa0504240 | AT5G01200.1 | 57.843 | 204 | 66 | 5 | 27 | 217 | 19 | 215 | 2.91e-73 | 227 |
| Msa0504240 | AT5G08520.1 | 51.075 | 186 | 90 | 1 | 37 | 221 | 6 | 191 | 6.72e-58 | 189 |
| Msa0504240 | AT1G49010.1 | 47.716 | 197 | 78 | 3 | 43 | 216 | 8 | 202 | 1.59e-51 | 173 |
| Msa0504240 | AT5G04760.1 | 49.162 | 179 | 79 | 3 | 40 | 218 | 3 | 169 | 8.51e-51 | 168 |
| Msa0504240 | AT5G23650.1 | 38.866 | 247 | 129 | 5 | 37 | 279 | 7 | 235 | 1.71e-42 | 150 |
| Msa0504240 | AT5G47390.1 | 59.140 | 93 | 38 | 0 | 128 | 220 | 76 | 168 | 9.57e-32 | 122 |
| Msa0504240 | AT3G10580.2 | 35.714 | 224 | 109 | 8 | 43 | 254 | 8 | 208 | 9.95e-31 | 117 |
| Msa0504240 | AT3G10580.1 | 35.714 | 224 | 109 | 8 | 43 | 254 | 8 | 208 | 1.39e-30 | 117 |
| Msa0504240 | AT4G09450.1 | 40.116 | 172 | 82 | 3 | 42 | 213 | 6 | 156 | 2.13e-29 | 112 |
| Msa0504240 | AT5G61620.1 | 54.206 | 107 | 45 | 1 | 118 | 224 | 82 | 184 | 7.75e-29 | 113 |
| Msa0504240 | AT5G56840.1 | 57.609 | 92 | 36 | 2 | 134 | 224 | 79 | 168 | 1.10e-27 | 108 |
| Msa0504240 | AT3G16350.1 | 60.784 | 102 | 30 | 2 | 128 | 229 | 125 | 216 | 2.03e-27 | 110 |
| Msa0504240 | AT1G70000.1 | 68.354 | 79 | 23 | 1 | 135 | 213 | 87 | 163 | 3.91e-27 | 107 |
| Msa0504240 | AT1G70000.2 | 68.354 | 79 | 23 | 1 | 135 | 213 | 87 | 163 | 3.91e-27 | 107 |
| Msa0504240 | AT1G74840.2 | 57.692 | 104 | 42 | 1 | 143 | 244 | 91 | 194 | 6.36e-26 | 103 |
| Msa0504240 | AT1G74840.1 | 57.692 | 104 | 42 | 1 | 143 | 244 | 91 | 194 | 1.03e-25 | 103 |
| Msa0504240 | AT1G19000.2 | 62.791 | 86 | 31 | 1 | 144 | 228 | 98 | 183 | 2.66e-25 | 103 |
| Msa0504240 | AT1G19000.1 | 62.791 | 86 | 31 | 1 | 144 | 228 | 98 | 183 | 2.66e-25 | 103 |
| Msa0504240 | AT1G75250.2 | 54.667 | 75 | 34 | 0 | 33 | 107 | 2 | 76 | 4.10e-21 | 86.7 |
| Msa0504240 | AT1G75250.1 | 54.667 | 75 | 34 | 0 | 33 | 107 | 2 | 76 | 6.16e-21 | 87.0 |
| Msa0504240 | AT3G10590.1 | 37.017 | 181 | 98 | 7 | 40 | 213 | 4 | 175 | 6.52e-20 | 86.7 |
| Msa0504240 | AT2G21650.1 | 52.174 | 69 | 33 | 0 | 43 | 111 | 14 | 82 | 2.07e-17 | 77.0 |
| Msa0504240 | AT4G39250.1 | 46.377 | 69 | 37 | 0 | 43 | 111 | 14 | 82 | 7.26e-16 | 72.8 |
| Msa0504240 | AT1G19510.1 | 55.738 | 61 | 27 | 0 | 47 | 107 | 16 | 76 | 1.17e-15 | 72.0 |
| Msa0504240 | AT2G18328.1 | 51.613 | 62 | 30 | 0 | 47 | 108 | 15 | 76 | 3.23e-12 | 62.0 |
| Msa0504240 | AT4G36570.1 | 61.364 | 44 | 17 | 0 | 43 | 86 | 12 | 55 | 8.26e-11 | 57.4 |
Find 92 sgRNAs with CRISPR-Local
Find 135 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCATGAGTCTTCTTATTT+TGG | 0.078101 | 3_4:+48448602 | Msa0504240:CDS |
| TTTCACCTTTCATAGGTTTA+AGG | 0.140387 | 3_4:-48448908 | None:intergenic |
| ATTCAAGACTATTACCTTAT+TGG | 0.153260 | 3_4:-48446874 | None:intergenic |
| TATTGAGTTATTTATTATTA+TGG | 0.169866 | 3_4:+48448708 | Msa0504240:three_prime_UTR |
| TTAGTTAGTTATTGCCTTCT+TGG | 0.174768 | 3_4:+48448833 | Msa0504240:three_prime_UTR |
| TCTTTCTGCTATTTCCAAAT+TGG | 0.206893 | 3_4:+48446603 | Msa0504240:five_prime_UTR |
| ATTTGACAGGTTATTTCTAT+TGG | 0.210653 | 3_4:+48448178 | Msa0504240:intron |
| TTGAATGTGAAAACCCAATT+TGG | 0.228567 | 3_4:-48446617 | None:intergenic |
| TCTTGCACAAGTTGGTTTCT+AGG | 0.236929 | 3_4:+48446837 | Msa0504240:five_prime_UTR |
| GGAGTTAATAATAACTCTTA+TGG | 0.241432 | 3_4:+48448542 | Msa0504240:CDS |
| GGTTTCTAGGGTTATCTTAT+TGG | 0.255506 | 3_4:+48446850 | Msa0504240:five_prime_UTR |
| TATTTCATCAGACAACTTTC+AGG | 0.257079 | 3_4:+48448296 | Msa0504240:CDS |
| CTTGAATATCAATATCAATT+TGG | 0.270388 | 3_4:+48446890 | Msa0504240:five_prime_UTR |
| GGAAAATCAATTAGAAATAA+AGG | 0.272315 | 3_4:-48446670 | None:intergenic |
| TTAGATTGGGTGAATTCTTC+TGG | 0.292652 | 3_4:+48447559 | Msa0504240:CDS |
| AAACCAATTGTTGGTATAGT+TGG | 0.296807 | 3_4:-48447281 | None:intergenic |
| TTCACCCAATCTAAGGTAAA+AGG | 0.308169 | 3_4:-48447550 | None:intergenic |
| CTTTCTGCTATTTCCAAATT+GGG | 0.309736 | 3_4:+48446604 | Msa0504240:five_prime_UTR |
| GCTGGTTTGGTTCCAATTCC+TGG | 0.315843 | 3_4:+48447505 | Msa0504240:CDS |
| GGTGCATGAGGGTGAGAATT+TGG | 0.327156 | 3_4:-48447244 | None:intergenic |
| TTGCAGCTTTCACCTTTCAT+AGG | 0.331595 | 3_4:-48448915 | None:intergenic |
| CCTTTCTTCCTTTCCTGATC+AGG | 0.333627 | 3_4:-48447634 | None:intergenic |
| TTTGACAGGTTATTTCTATT+GGG | 0.339731 | 3_4:+48448179 | Msa0504240:intron |
| AGTGGAAAGAGAGGCTCTTC+TGG | 0.344816 | 3_4:+48447604 | Msa0504240:CDS |
| CTCTTGGTTTCTTCTGAAGT+TGG | 0.347825 | 3_4:-48448392 | None:intergenic |
| GTTATCTTATTGGACCAATA+AGG | 0.353998 | 3_4:+48446860 | Msa0504240:five_prime_UTR |
| ATCTTACTTGTGTTCTTCTT+CGG | 0.354438 | 3_4:-48447668 | None:intergenic |
| CAACTTATGCATAGCCTAAA+CGG | 0.360566 | 3_4:-48446692 | None:intergenic |
| GCATTAACAGGAGCACAAAA+TGG | 0.365638 | 3_4:+48447323 | Msa0504240:CDS |
| TGTGGTAAATTCTCCACCTT+TGG | 0.367052 | 3_4:+48447067 | Msa0504240:five_prime_UTR |
| AGAAGAATTCACCCAATCTA+AGG | 0.374549 | 3_4:-48447557 | None:intergenic |
| ACATCAACAACACTCTTTCC+AGG | 0.376605 | 3_4:-48447436 | None:intergenic |
| TACTTGTTCATAATCATGTT+TGG | 0.382661 | 3_4:-48448425 | None:intergenic |
| TGCTCTTGCAGTTTATGATA+AGG | 0.387222 | 3_4:+48447375 | Msa0504240:CDS |
| ATTCCAACTATACCAACAAT+TGG | 0.389716 | 3_4:+48447278 | Msa0504240:CDS |
| ATTGTAGCAATAGCATTAAC+AGG | 0.398247 | 3_4:+48447311 | Msa0504240:CDS |
| GATGAATCAGTATAAGGAAT+TGG | 0.401455 | 3_4:+48447459 | Msa0504240:CDS |
| GTAGTACTATAACCAGGAAT+TGG | 0.407318 | 3_4:-48447517 | None:intergenic |
| GTTGTTGAGAAGATTGCATT+TGG | 0.408588 | 3_4:-48448649 | None:intergenic |
| CAATATATTTACATAGAACT+TGG | 0.415544 | 3_4:-48448794 | None:intergenic |
| GTTTGGTGAAGTTGATCTCT+TGG | 0.418126 | 3_4:-48448408 | None:intergenic |
| CTTGCACAAGTTGGTTTCTA+GGG | 0.426235 | 3_4:+48446838 | Msa0504240:five_prime_UTR |
| TCAAACAATTTGTTCTCTGC+AGG | 0.426400 | 3_4:-48447349 | None:intergenic |
| TGCATGATGTTGTTGATGAT+TGG | 0.427511 | 3_4:+48448682 | Msa0504240:exon |
| GTGAATTCTTCTGGTTATGA+TGG | 0.427738 | 3_4:+48447568 | Msa0504240:CDS |
| TTGTGTTCTTCTTCGGTCCA+TGG | 0.429989 | 3_4:-48447661 | None:intergenic |
| GATGTTTGTAATATAGAAGC+TGG | 0.431912 | 3_4:+48447487 | Msa0504240:CDS |
| AAAAGTATGGAAAAGGTGAT+TGG | 0.434556 | 3_4:+48448207 | Msa0504240:CDS |
| TCTGTAACTTCTGATATTGA+AGG | 0.437794 | 3_4:+48448949 | Msa0504240:three_prime_UTR |
| GAAAATCAATTAGAAATAAA+GGG | 0.438068 | 3_4:-48446669 | None:intergenic |
| TTGTAATATAGAAGCTGGTT+TGG | 0.450084 | 3_4:+48447492 | Msa0504240:CDS |
| TTTATAGATCTTGCACAAGT+TGG | 0.451750 | 3_4:+48446829 | Msa0504240:five_prime_UTR |
| GAGTTATTATTAACTCCATA+AGG | 0.453193 | 3_4:-48448536 | None:intergenic |
| TGATGTGATGAATCAGTATA+AGG | 0.454237 | 3_4:+48447453 | Msa0504240:CDS |
| AACTTATGCATAGCCTAAAC+GGG | 0.468413 | 3_4:-48446691 | None:intergenic |
| GAAAGACACTGAATTTATGA+AGG | 0.477154 | 3_4:-48446586 | None:intergenic |
| TTCTGGTAGATCTCCTGATC+AGG | 0.477520 | 3_4:+48447621 | Msa0504240:CDS |
| CAAGGAACTTTGTGATCACT+AGG | 0.491493 | 3_4:+48448240 | Msa0504240:CDS |
| TATGAACTTGATGATAGCAT+TGG | 0.526347 | 3_4:+48448858 | Msa0504240:three_prime_UTR |
| TCTTATGGATTTAAAATGCA+AGG | 0.530791 | 3_4:+48448557 | Msa0504240:CDS |
| ATTTATCTTTCATATTGTTG+TGG | 0.535933 | 3_4:+48447049 | Msa0504240:five_prime_UTR |
| GCTACCTTATGCCACCGATC+CGG | 0.536074 | 3_4:-48447403 | None:intergenic |
| AGAGGATTTAGTGGAAAGAG+AGG | 0.538143 | 3_4:+48447595 | Msa0504240:CDS |
| CCTGATCAGGAAAGGAAGAA+AGG | 0.540469 | 3_4:+48447634 | Msa0504240:CDS |
| TTGAATGCTGTCATAGTAGC+TGG | 0.544765 | 3_4:-48448485 | None:intergenic |
| ATGAAAACTTGTTCATGTGA+AGG | 0.546854 | 3_4:-48448509 | None:intergenic |
| AAGGTAGCTGCAATGATCCC+TGG | 0.550717 | 3_4:+48447418 | Msa0504240:CDS |
| GCATGGCTAGCTACTTGTGT+TGG | 0.551417 | 3_4:-48448266 | None:intergenic |
| AACAACCTTAAACCTATGAA+AGG | 0.563921 | 3_4:+48448903 | Msa0504240:three_prime_UTR |
| TACGCCGGATCGGTGGCATA+AGG | 0.566659 | 3_4:+48447399 | Msa0504240:CDS |
| ATCAAGTTCATATACCAAGA+AGG | 0.569120 | 3_4:-48448847 | None:intergenic |
| CTCAGAAGTGGTGTTAGCAG+TGG | 0.576504 | 3_4:-48448450 | None:intergenic |
| TGATGAAATATTTCTGAGCA+TGG | 0.587728 | 3_4:-48448283 | None:intergenic |
| ATGATAAGGATACGCCGGAT+CGG | 0.588112 | 3_4:+48447389 | Msa0504240:CDS |
| CTGAAAATGCATCTCAGAAG+TGG | 0.589832 | 3_4:-48448462 | None:intergenic |
| AAATAAGAAGACTCATGAAG+AGG | 0.592849 | 3_4:-48448599 | None:intergenic |
| AAAGACACTGAATTTATGAA+GGG | 0.594445 | 3_4:-48446585 | None:intergenic |
| CATCAACAACACTCTTTCCA+GGG | 0.594776 | 3_4:-48447435 | None:intergenic |
| TATATGATATTTCAAAACAG+AGG | 0.595770 | 3_4:-48447110 | None:intergenic |
| AACTTGATGATAGCATTGGA+AGG | 0.596746 | 3_4:+48448862 | Msa0504240:three_prime_UTR |
| GTGATTGGAGAAACATATCA+AGG | 0.596845 | 3_4:+48448222 | Msa0504240:CDS |
| GTAGATCTCCTGATCAGGAA+AGG | 0.600023 | 3_4:+48447626 | Msa0504240:CDS |
| TTCATCAGACAACTTTCAGG+AGG | 0.604647 | 3_4:+48448299 | Msa0504240:CDS |
| AAAGGAAGAAAGGTGTGCCA+TGG | 0.605391 | 3_4:+48447644 | Msa0504240:CDS |
| ATAAGGATACGCCGGATCGG+TGG | 0.605758 | 3_4:+48447392 | Msa0504240:CDS |
| AGATAAATGAAGAGAACCAA+AGG | 0.617158 | 3_4:-48447083 | None:intergenic |
| TGGACCTCAGACACAAAACA+TGG | 0.622490 | 3_4:+48448622 | Msa0504240:CDS |
| TATGAAAGGTGAAAGCTGCA+AGG | 0.634603 | 3_4:+48448917 | Msa0504240:three_prime_UTR |
| TAAATGAAGAGAACCAAAGG+TGG | 0.648472 | 3_4:-48447080 | None:intergenic |
| AGTTTATGATAAGGATACGC+CGG | 0.649185 | 3_4:+48447384 | Msa0504240:CDS |
| GCAGCAGTAGTACTATAACC+AGG | 0.674867 | 3_4:-48447523 | None:intergenic |
| TTTGAACAAATGGTGCATGA+GGG | 0.682304 | 3_4:-48447255 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTAGTATATAAGA+AGG | + | chr3_4:48446789-48446808 | Msa0504240:five_prime_UTR | 10.0% |
| !!! | TATTTATTTAAGTATTTTTG+AGG | + | chr3_4:48448092-48448111 | Msa0504240:intron | 10.0% |
| !!! | ATTTATTTAAGTATTTTTGA+GGG | + | chr3_4:48448093-48448112 | Msa0504240:intron | 10.0% |
| !! | TATTGAGTTATTTATTATTA+TGG | + | chr3_4:48448708-48448727 | Msa0504240:three_prime_UTR | 10.0% |
| !! | GAAAATCAATTAGAAATAAA+GGG | - | chr3_4:48446672-48446691 | None:intergenic | 15.0% |
| !!! | TTTAGTTAAATTTTTCAACT+TGG | + | chr3_4:48447185-48447204 | Msa0504240:five_prime_UTR | 15.0% |
| !!! | ATATTTATTTAAGTTGTTGA+AGG | + | chr3_4:48448120-48448139 | Msa0504240:intron | 15.0% |
| !!! | TATTTATTTAAGTTGTTGAA+GGG | + | chr3_4:48448121-48448140 | Msa0504240:intron | 15.0% |
| !! | AATAAAGGGAAAAAACAAAA+GGG | - | chr3_4:48446658-48446677 | None:intergenic | 20.0% |
| !! | AAATAAAGGGAAAAAACAAA+AGG | - | chr3_4:48446659-48446678 | None:intergenic | 20.0% |
| !! | GGAAAATCAATTAGAAATAA+AGG | - | chr3_4:48446673-48446692 | None:intergenic | 20.0% |
| !! | CTTGAATATCAATATCAATT+TGG | + | chr3_4:48446890-48446909 | Msa0504240:five_prime_UTR | 20.0% |
| !!! | CAATAAGCATTTTTTTCAAA+AGG | - | chr3_4:48447023-48447042 | None:intergenic | 20.0% |
| !! | ATTTATCTTTCATATTGTTG+TGG | + | chr3_4:48447049-48447068 | Msa0504240:five_prime_UTR | 20.0% |
| !! | TATATGATATTTCAAAACAG+AGG | - | chr3_4:48447113-48447132 | None:intergenic | 20.0% |
| !! | CATAAACTTTAAATTACATC+CGG | - | chr3_4:48447953-48447972 | None:intergenic | 20.0% |
| !! | GATTATGAAAATAATTTGAC+AGG | + | chr3_4:48448165-48448184 | Msa0504240:intron | 20.0% |
| !! | CAATATATTTACATAGAACT+TGG | - | chr3_4:48448797-48448816 | None:intergenic | 20.0% |
| ! | AAAGACACTGAATTTATGAA+GGG | - | chr3_4:48446588-48446607 | None:intergenic | 25.0% |
| ! | ATTCAAGACTATTACCTTAT+TGG | - | chr3_4:48446877-48446896 | None:intergenic | 25.0% |
| !! | TAGTTGGAATTTTGAACAAA+TGG | - | chr3_4:48447268-48447287 | None:intergenic | 25.0% |
| !! | TATGTGAAGATTTTACTGTT+TGG | + | chr3_4:48447751-48447770 | Msa0504240:intron | 25.0% |
| ! | AACTAATATTAGTGCATGTT+TGG | + | chr3_4:48447801-48447820 | Msa0504240:intron | 25.0% |
| !! | TGACAAAAGCTACATTTTAA+AGG | - | chr3_4:48447863-48447882 | None:intergenic | 25.0% |
| ! | TAAAGTTTATGTATGAACCT+AGG | + | chr3_4:48447962-48447981 | Msa0504240:intron | 25.0% |
| ! | ATCTGTAGTTATTAAGAGTT+AGG | + | chr3_4:48448009-48448028 | Msa0504240:intron | 25.0% |
| ! | CTTAACTAATAACTACCAAT+AGG | - | chr3_4:48448040-48448059 | None:intergenic | 25.0% |
| !!! | ATTTGACAGGTTATTTCTAT+TGG | + | chr3_4:48448178-48448197 | Msa0504240:intron | 25.0% |
| !!! | TTTGACAGGTTATTTCTATT+GGG | + | chr3_4:48448179-48448198 | Msa0504240:intron | 25.0% |
| ! | TACTTGTTCATAATCATGTT+TGG | - | chr3_4:48448428-48448447 | None:intergenic | 25.0% |
| ! | GAGTTATTATTAACTCCATA+AGG | - | chr3_4:48448539-48448558 | None:intergenic | 25.0% |
| ! | GGAGTTAATAATAACTCTTA+TGG | + | chr3_4:48448542-48448561 | Msa0504240:CDS | 25.0% |
| !! | TCTTATGGATTTAAAATGCA+AGG | + | chr3_4:48448557-48448576 | Msa0504240:CDS | 25.0% |
| !! | TAGAACAAGTATCTTTTGTT+TGG | + | chr3_4:48448732-48448751 | Msa0504240:three_prime_UTR | 25.0% |
| GAAAGACACTGAATTTATGA+AGG | - | chr3_4:48446589-48446608 | None:intergenic | 30.0% | |
| !! | TCTTTCTGCTATTTCCAAAT+TGG | + | chr3_4:48446603-48446622 | Msa0504240:five_prime_UTR | 30.0% |
| !! | CTTTCTGCTATTTCCAAATT+GGG | + | chr3_4:48446604-48446623 | Msa0504240:five_prime_UTR | 30.0% |
| TTGAATGTGAAAACCCAATT+TGG | - | chr3_4:48446620-48446639 | None:intergenic | 30.0% | |
| ! | GGAAAAAACAAAAGGGTATA+AGG | - | chr3_4:48446651-48446670 | None:intergenic | 30.0% |
| !! | TCTAATTGATTTTCCCGTTT+AGG | + | chr3_4:48446678-48446697 | Msa0504240:five_prime_UTR | 30.0% |
| TTTATAGATCTTGCACAAGT+TGG | + | chr3_4:48446829-48446848 | Msa0504240:five_prime_UTR | 30.0% | |
| GTTATCTTATTGGACCAATA+AGG | + | chr3_4:48446860-48446879 | Msa0504240:five_prime_UTR | 30.0% | |
| AGATAAATGAAGAGAACCAA+AGG | - | chr3_4:48447086-48447105 | None:intergenic | 30.0% | |
| !!! | TTGGTTTTTTGTGATGAAGT+GGG | + | chr3_4:48447204-48447223 | Msa0504240:exon | 30.0% |
| ATTCCAACTATACCAACAAT+TGG | + | chr3_4:48447278-48447297 | Msa0504240:CDS | 30.0% | |
| AAACCAATTGTTGGTATAGT+TGG | - | chr3_4:48447284-48447303 | None:intergenic | 30.0% | |
| !!! | CTATACCAACAATTGGTTTT+TGG | + | chr3_4:48447285-48447304 | Msa0504240:CDS | 30.0% |
| ATCTTCCAAAAACCAATTGT+TGG | - | chr3_4:48447293-48447312 | None:intergenic | 30.0% | |
| ATTGTAGCAATAGCATTAAC+AGG | + | chr3_4:48447311-48447330 | Msa0504240:CDS | 30.0% | |
| TGATGTGATGAATCAGTATA+AGG | + | chr3_4:48447453-48447472 | Msa0504240:CDS | 30.0% | |
| GATGAATCAGTATAAGGAAT+TGG | + | chr3_4:48447459-48447478 | Msa0504240:CDS | 30.0% | |
| GATGTTTGTAATATAGAAGC+TGG | + | chr3_4:48447487-48447506 | Msa0504240:CDS | 30.0% | |
| TTGTAATATAGAAGCTGGTT+TGG | + | chr3_4:48447492-48447511 | Msa0504240:CDS | 30.0% | |
| ! | TTCACCTTTTACCTTAGATT+GGG | + | chr3_4:48447546-48447565 | Msa0504240:CDS | 30.0% |
| ATCTTACTTGTGTTCTTCTT+CGG | - | chr3_4:48447671-48447690 | None:intergenic | 30.0% | |
| ! | TTTTGTCAAAATCACGATGA+CGG | + | chr3_4:48447875-48447894 | Msa0504240:intron | 30.0% |
| GTTTGGATTGACAGTTAATT+TGG | - | chr3_4:48447920-48447939 | None:intergenic | 30.0% | |
| AAGAGTTAGGTATTTCCTAT+TGG | + | chr3_4:48448022-48448041 | Msa0504240:intron | 30.0% | |
| ! | AAAAGTATGGAAAAGGTGAT+TGG | + | chr3_4:48448207-48448226 | Msa0504240:CDS | 30.0% |
| ! | TGATGAAATATTTCTGAGCA+TGG | - | chr3_4:48448286-48448305 | None:intergenic | 30.0% |
| TATTTCATCAGACAACTTTC+AGG | + | chr3_4:48448296-48448315 | Msa0504240:CDS | 30.0% | |
| ! | ATGAAAACTTGTTCATGTGA+AGG | - | chr3_4:48448512-48448531 | None:intergenic | 30.0% |
| AAATAAGAAGACTCATGAAG+AGG | - | chr3_4:48448602-48448621 | None:intergenic | 30.0% | |
| !! | CTTCATGAGTCTTCTTATTT+TGG | + | chr3_4:48448602-48448621 | Msa0504240:CDS | 30.0% |
| TTAGTTAGTTATTGCCTTCT+TGG | + | chr3_4:48448833-48448852 | Msa0504240:three_prime_UTR | 30.0% | |
| ATCAAGTTCATATACCAAGA+AGG | - | chr3_4:48448850-48448869 | None:intergenic | 30.0% | |
| ! | TATGAACTTGATGATAGCAT+TGG | + | chr3_4:48448858-48448877 | Msa0504240:three_prime_UTR | 30.0% |
| AACAACCTTAAACCTATGAA+AGG | + | chr3_4:48448903-48448922 | Msa0504240:three_prime_UTR | 30.0% | |
| TTTCACCTTTCATAGGTTTA+AGG | - | chr3_4:48448911-48448930 | None:intergenic | 30.0% | |
| TCTGTAACTTCTGATATTGA+AGG | + | chr3_4:48448949-48448968 | Msa0504240:three_prime_UTR | 30.0% | |
| AACTTATGCATAGCCTAAAC+GGG | - | chr3_4:48446694-48446713 | None:intergenic | 35.0% | |
| CAACTTATGCATAGCCTAAA+CGG | - | chr3_4:48446695-48446714 | None:intergenic | 35.0% | |
| !! | GGTTTCTAGGGTTATCTTAT+TGG | + | chr3_4:48446850-48446869 | Msa0504240:five_prime_UTR | 35.0% |
| TAAATGAAGAGAACCAAAGG+TGG | - | chr3_4:48447083-48447102 | None:intergenic | 35.0% | |
| !!! | CTTGGTTTTTTGTGATGAAG+TGG | + | chr3_4:48447203-48447222 | Msa0504240:exon | 35.0% |
| ! | TTTTGTGATGAAGTGGGAAA+TGG | + | chr3_4:48447210-48447229 | Msa0504240:exon | 35.0% |
| TTTGAACAAATGGTGCATGA+GGG | - | chr3_4:48447258-48447277 | None:intergenic | 35.0% | |
| ! | TTTTGAACAAATGGTGCATG+AGG | - | chr3_4:48447259-48447278 | None:intergenic | 35.0% |
| ! | TCAAACAATTTGTTCTCTGC+AGG | - | chr3_4:48447352-48447371 | None:intergenic | 35.0% |
| TGCTCTTGCAGTTTATGATA+AGG | + | chr3_4:48447375-48447394 | Msa0504240:CDS | 35.0% | |
| AGTTTATGATAAGGATACGC+CGG | + | chr3_4:48447384-48447403 | Msa0504240:CDS | 35.0% | |
| GTAGTACTATAACCAGGAAT+TGG | - | chr3_4:48447520-48447539 | None:intergenic | 35.0% | |
| ! | CTTCACCTTTTACCTTAGAT+TGG | + | chr3_4:48447545-48447564 | Msa0504240:CDS | 35.0% |
| ! | TTCACCCAATCTAAGGTAAA+AGG | - | chr3_4:48447553-48447572 | None:intergenic | 35.0% |
| AGAAGAATTCACCCAATCTA+AGG | - | chr3_4:48447560-48447579 | None:intergenic | 35.0% | |
| TTAGATTGGGTGAATTCTTC+TGG | + | chr3_4:48447559-48447578 | Msa0504240:CDS | 35.0% | |
| ! | GTGAATTCTTCTGGTTATGA+TGG | + | chr3_4:48447568-48447587 | Msa0504240:CDS | 35.0% |
| !!! | TCTGGTTATGATGGTTTTAG+AGG | + | chr3_4:48447577-48447596 | Msa0504240:CDS | 35.0% |
| !!! | GATGGTTTTAGAGGATTTAG+TGG | + | chr3_4:48447586-48447605 | Msa0504240:CDS | 35.0% |
| ACTTTAAATTACATCCGGTC+AGG | - | chr3_4:48447948-48447967 | None:intergenic | 35.0% | |
| TTATGTATGAACCTAGGAGT+TGG | + | chr3_4:48447968-48447987 | Msa0504240:intron | 35.0% | |
| CTATTGGGTCTGAAAAAGTA+TGG | + | chr3_4:48448194-48448213 | Msa0504240:CDS | 35.0% | |
| ! | GGTCTGAAAAAGTATGGAAA+AGG | + | chr3_4:48448200-48448219 | Msa0504240:CDS | 35.0% |
| GTGATTGGAGAAACATATCA+AGG | + | chr3_4:48448222-48448241 | Msa0504240:CDS | 35.0% | |
| ! | CAAGTTTTCATGTCTCCTTA+TGG | + | chr3_4:48448521-48448540 | Msa0504240:CDS | 35.0% |
| ! | AAAACCATGTTTTGTGTCTG+AGG | - | chr3_4:48448629-48448648 | None:intergenic | 35.0% |
| GTTGTTGAGAAGATTGCATT+TGG | - | chr3_4:48448652-48448671 | None:intergenic | 35.0% | |
| !! | TGCATGATGTTGTTGATGAT+TGG | + | chr3_4:48448682-48448701 | Msa0504240:exon | 35.0% |
| ! | AACTTGATGATAGCATTGGA+AGG | + | chr3_4:48448862-48448881 | Msa0504240:three_prime_UTR | 35.0% |
| !! | TCTTGCACAAGTTGGTTTCT+AGG | + | chr3_4:48446837-48446856 | Msa0504240:five_prime_UTR | 40.0% |
| !! | CTTGCACAAGTTGGTTTCTA+GGG | + | chr3_4:48446838-48446857 | Msa0504240:five_prime_UTR | 40.0% |
| TGTGGTAAATTCTCCACCTT+TGG | + | chr3_4:48447067-48447086 | Msa0504240:five_prime_UTR | 40.0% | |
| ! | GCATTAACAGGAGCACAAAA+TGG | + | chr3_4:48447323-48447342 | Msa0504240:CDS | 40.0% |
| CATCAACAACACTCTTTCCA+GGG | - | chr3_4:48447438-48447457 | None:intergenic | 40.0% | |
| ACATCAACAACACTCTTTCC+AGG | - | chr3_4:48447439-48447458 | None:intergenic | 40.0% | |
| AGAGGATTTAGTGGAAAGAG+AGG | + | chr3_4:48447595-48447614 | Msa0504240:CDS | 40.0% | |
| ATTTCACTTCACCAACTCCT+AGG | - | chr3_4:48447982-48448001 | None:intergenic | 40.0% | |
| CAAGGAACTTTGTGATCACT+AGG | + | chr3_4:48448240-48448259 | Msa0504240:CDS | 40.0% | |
| TTCATCAGACAACTTTCAGG+AGG | + | chr3_4:48448299-48448318 | Msa0504240:CDS | 40.0% | |
| !! | CTCTTGGTTTCTTCTGAAGT+TGG | - | chr3_4:48448395-48448414 | None:intergenic | 40.0% |
| ! | GTTTGGTGAAGTTGATCTCT+TGG | - | chr3_4:48448411-48448430 | None:intergenic | 40.0% |
| CTGAAAATGCATCTCAGAAG+TGG | - | chr3_4:48448465-48448484 | None:intergenic | 40.0% | |
| TTGAATGCTGTCATAGTAGC+TGG | - | chr3_4:48448488-48448507 | None:intergenic | 40.0% | |
| TTGCAGCTTTCACCTTTCAT+AGG | - | chr3_4:48448918-48448937 | None:intergenic | 40.0% | |
| TATGAAAGGTGAAAGCTGCA+AGG | + | chr3_4:48448917-48448936 | Msa0504240:three_prime_UTR | 40.0% | |
| ATGATAAGGATACGCCGGAT+CGG | + | chr3_4:48447389-48447408 | Msa0504240:CDS | 45.0% | |
| GCAGCAGTAGTACTATAACC+AGG | - | chr3_4:48447526-48447545 | None:intergenic | 45.0% | |
| TTCTGGTAGATCTCCTGATC+AGG | + | chr3_4:48447621-48447640 | Msa0504240:CDS | 45.0% | |
| GTAGATCTCCTGATCAGGAA+AGG | + | chr3_4:48447626-48447645 | Msa0504240:CDS | 45.0% | |
| CCTTTCTTCCTTTCCTGATC+AGG | - | chr3_4:48447637-48447656 | None:intergenic | 45.0% | |
| CCTGATCAGGAAAGGAAGAA+AGG | + | chr3_4:48447634-48447653 | Msa0504240:CDS | 45.0% | |
| ! | AAAGGAAGAAAGGTGTGCCA+TGG | + | chr3_4:48447644-48447663 | Msa0504240:CDS | 45.0% |
| TTGTGTTCTTCTTCGGTCCA+TGG | - | chr3_4:48447664-48447683 | None:intergenic | 45.0% | |
| AATCCAAACATGCACCTGAC+CGG | + | chr3_4:48447931-48447950 | Msa0504240:intron | 45.0% | |
| TGGACCTCAGACACAAAACA+TGG | + | chr3_4:48448622-48448641 | Msa0504240:CDS | 45.0% | |
| GGTGCATGAGGGTGAGAATT+TGG | - | chr3_4:48447247-48447266 | None:intergenic | 50.0% | |
| AAGGTAGCTGCAATGATCCC+TGG | + | chr3_4:48447418-48447437 | Msa0504240:CDS | 50.0% | |
| !! | GCTGGTTTGGTTCCAATTCC+TGG | + | chr3_4:48447505-48447524 | Msa0504240:CDS | 50.0% |
| AGTGGAAAGAGAGGCTCTTC+TGG | + | chr3_4:48447604-48447623 | Msa0504240:CDS | 50.0% | |
| ! | GCATGGCTAGCTACTTGTGT+TGG | - | chr3_4:48448269-48448288 | None:intergenic | 50.0% |
| ! | CTCAGAAGTGGTGTTAGCAG+TGG | - | chr3_4:48448453-48448472 | None:intergenic | 50.0% |
| ATAAGGATACGCCGGATCGG+TGG | + | chr3_4:48447392-48447411 | Msa0504240:CDS | 55.0% | |
| GCTACCTTATGCCACCGATC+CGG | - | chr3_4:48447406-48447425 | None:intergenic | 55.0% | |
| CATCCGGTCAGGTGCATGTT+TGG | - | chr3_4:48447937-48447956 | None:intergenic | 55.0% | |
| TACGCCGGATCGGTGGCATA+AGG | + | chr3_4:48447399-48447418 | Msa0504240:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 48446543 | 48449027 | 48446543 | ID=Msa0504240;Name=Msa0504240 |
| chr3_4 | mRNA | 48446543 | 48449027 | 48446543 | ID=Msa0504240-mRNA-1;Parent=Msa0504240;Name=Msa0504240-mRNA-1;_AED=0.00;_eAED=0.00;_QI=674|1|1|1|1|1|2|339|322 |
| chr3_4 | exon | 48446543 | 48447683 | 48446543 | ID=Msa0504240-mRNA-1:exon:10410;Parent=Msa0504240-mRNA-1 |
| chr3_4 | exon | 48448187 | 48449027 | 48448187 | ID=Msa0504240-mRNA-1:exon:10411;Parent=Msa0504240-mRNA-1 |
| chr3_4 | five_prime_UTR | 48446543 | 48447216 | 48446543 | ID=Msa0504240-mRNA-1:five_prime_utr;Parent=Msa0504240-mRNA-1 |
| chr3_4 | CDS | 48447217 | 48447683 | 48447217 | ID=Msa0504240-mRNA-1:cds;Parent=Msa0504240-mRNA-1 |
| chr3_4 | CDS | 48448187 | 48448688 | 48448187 | ID=Msa0504240-mRNA-1:cds;Parent=Msa0504240-mRNA-1 |
| chr3_4 | three_prime_UTR | 48448689 | 48449027 | 48448689 | ID=Msa0504240-mRNA-1:three_prime_utr;Parent=Msa0504240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
