Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423040 | XP_003601919.2 | 98.675 | 302 | 3 | 1 | 1 | 301 | 1 | 302 | 0.0 | 611 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423040 | sp|Q940J1|ATB16_ARATH | 47.284 | 313 | 134 | 15 | 1 | 301 | 1 | 294 | 1.42e-69 | 220 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423040 | A0A396J2A4 | 98.675 | 302 | 3 | 1 | 1 | 301 | 1 | 302 | 0.0 | 611 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0423040 | TF | HB-HD-ZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0423040 | 0.804583 | 2.014729e-49 | -8.615850e-47 |
| Msa0002540 | Msa0423040 | 0.834903 | 2.289950e-56 | -8.615850e-47 |
| Msa0008340 | Msa0423040 | 0.820471 | 6.740370e-53 | -8.615850e-47 |
| Msa0016670 | Msa0423040 | 0.823631 | 1.248511e-53 | -8.615850e-47 |
| Msa0017510 | Msa0423040 | 0.818331 | 2.072262e-52 | -8.615850e-47 |
| Msa0020930 | Msa0423040 | 0.801571 | 8.454987e-49 | -8.615850e-47 |
| Msa0021810 | Msa0423040 | 0.845396 | 4.167844e-59 | -8.615850e-47 |
| Msa0040450 | Msa0423040 | 0.833364 | 5.563703e-56 | -8.615850e-47 |
| Msa0044020 | Msa0423040 | 0.809725 | 1.642060e-50 | -8.615850e-47 |
| Msa0046100 | Msa0423040 | 0.827457 | 1.548186e-54 | -8.615850e-47 |
| Msa0047050 | Msa0423040 | 0.826114 | 3.239353e-54 | -8.615850e-47 |
| Msa0047070 | Msa0423040 | 0.810906 | 9.129451e-51 | -8.615850e-47 |
| Msa0055040 | Msa0423040 | 0.818888 | 1.549060e-52 | -8.615850e-47 |
| Msa0057710 | Msa0423040 | 0.802139 | 6.464180e-49 | -8.615850e-47 |
| Msa0064560 | Msa0423040 | 0.810170 | 1.317035e-50 | -8.615850e-47 |
| Msa0067940 | Msa0423040 | 0.800518 | 1.387913e-48 | -8.615850e-47 |
| Msa0076310 | Msa0423040 | 0.811486 | 6.835233e-51 | -8.615850e-47 |
| Msa0078650 | Msa0423040 | 0.803877 | 2.825894e-49 | -8.615850e-47 |
| Msa0084890 | Msa0423040 | 0.812801 | 3.531840e-51 | -8.615850e-47 |
| Msa0090590 | Msa0423040 | 0.808119 | 3.622294e-50 | -8.615850e-47 |
| Msa0091570 | Msa0423040 | 0.803001 | 4.293584e-49 | -8.615850e-47 |
| Msa0094120 | Msa0423040 | 0.802924 | 4.452821e-49 | -8.615850e-47 |
| Msa0097810 | Msa0423040 | 0.826958 | 2.038514e-54 | -8.615850e-47 |
| Msa0110970 | Msa0423040 | 0.843837 | 1.095713e-58 | -8.615850e-47 |
| Msa0114540 | Msa0423040 | -0.802758 | 4.819846e-49 | -8.615850e-47 |
| Msa0124340 | Msa0423040 | 0.832108 | 1.140813e-55 | -8.615850e-47 |
| Msa0124990 | Msa0423040 | 0.801400 | 9.166741e-49 | -8.615850e-47 |
| Msa0127310 | Msa0423040 | 0.804949 | 1.690062e-49 | -8.615850e-47 |
| Msa0135380 | Msa0423040 | 0.805719 | 1.165203e-49 | -8.615850e-47 |
| Msa0140570 | Msa0423040 | 0.801485 | 8.805610e-49 | -8.615850e-47 |
| Msa0157290 | Msa0423040 | 0.818054 | 2.394836e-52 | -8.615850e-47 |
| Msa0160550 | Msa0423040 | 0.800323 | 1.521309e-48 | -8.615850e-47 |
| Msa0183830 | Msa0423040 | 0.811477 | 6.867215e-51 | -8.615850e-47 |
| Msa0191250 | Msa0423040 | 0.800800 | 1.215848e-48 | -8.615850e-47 |
| Msa0192510 | Msa0423040 | 0.849553 | 3.004142e-60 | -8.615850e-47 |
| Msa0195630 | Msa0423040 | 0.802098 | 6.591109e-49 | -8.615850e-47 |
| Msa0218780 | Msa0423040 | 0.801717 | 7.892956e-49 | -8.615850e-47 |
| Msa0219250 | Msa0423040 | -0.802812 | 4.697338e-49 | -8.615850e-47 |
| Msa0222920 | Msa0423040 | 0.838433 | 2.884105e-57 | -8.615850e-47 |
| Msa0225740 | Msa0423040 | 0.805481 | 1.307452e-49 | -8.615850e-47 |
| Msa0226460 | Msa0423040 | 0.815921 | 7.214349e-52 | -8.615850e-47 |
| Msa0233350 | Msa0423040 | 0.800581 | 1.347439e-48 | -8.615850e-47 |
| Msa0369220 | Msa0423040 | 0.814879 | 1.230566e-51 | -8.615850e-47 |
| Msa0369850 | Msa0423040 | 0.814570 | 1.440321e-51 | -8.615850e-47 |
| Msa0370110 | Msa0423040 | 0.801556 | 8.515528e-49 | -8.615850e-47 |
| Msa0373930 | Msa0423040 | 0.818643 | 1.760959e-52 | -8.615850e-47 |
| Msa0376040 | Msa0423040 | 0.826228 | 3.044349e-54 | -8.615850e-47 |
| Msa0376350 | Msa0423040 | 0.805507 | 1.291076e-49 | -8.615850e-47 |
| Msa0382270 | Msa0423040 | 0.802813 | 4.694526e-49 | -8.615850e-47 |
| Msa0389340 | Msa0423040 | 0.824061 | 9.900165e-54 | -8.615850e-47 |
| Msa0392940 | Msa0423040 | 0.800130 | 1.664628e-48 | -8.615850e-47 |
| Msa0393680 | Msa0423040 | 0.827401 | 1.596430e-54 | -8.615850e-47 |
| Msa0398730 | Msa0423040 | 0.829596 | 4.711003e-55 | -8.615850e-47 |
| Msa0402330 | Msa0423040 | 0.807751 | 4.336491e-50 | -8.615850e-47 |
| Msa0410500 | Msa0423040 | 0.834991 | 2.175776e-56 | -8.615850e-47 |
| Msa0410650 | Msa0423040 | 0.869645 | 2.651246e-66 | -8.615850e-47 |
| Msa0412440 | Msa0423040 | 0.804840 | 1.780685e-49 | -8.615850e-47 |
| Msa0414170 | Msa0423040 | 0.800210 | 1.603902e-48 | -8.615850e-47 |
| Msa0414950 | Msa0423040 | -0.838655 | 2.528074e-57 | -8.615850e-47 |
| Msa0416400 | Msa0423040 | 0.812860 | 3.427970e-51 | -8.615850e-47 |
| Msa0417270 | Msa0423040 | 0.804697 | 1.907232e-49 | -8.615850e-47 |
| Msa0417880 | Msa0423040 | 0.811273 | 7.603196e-51 | -8.615850e-47 |
| Msa0420840 | Msa0423040 | 0.831300 | 1.804571e-55 | -8.615850e-47 |
| Msa0421780 | Msa0423040 | -0.804953 | 1.686523e-49 | -8.615850e-47 |
| Msa0422850 | Msa0423040 | 0.846660 | 1.889252e-59 | -8.615850e-47 |
| Msa0422930 | Msa0423040 | 0.844698 | 6.436339e-59 | -8.615850e-47 |
| Msa0423040 | Msa0432770 | 0.840934 | 6.446138e-58 | -8.615850e-47 |
| Msa0423040 | Msa0441130 | 0.814105 | 1.824605e-51 | -8.615850e-47 |
| Msa0423040 | Msa0459770 | -0.805667 | 1.195058e-49 | -8.615850e-47 |
| Msa0423040 | Msa0469160 | 0.823288 | 1.501219e-53 | -8.615850e-47 |
| Msa0423040 | Msa0474950 | 0.853346 | 2.538813e-61 | -8.615850e-47 |
| Msa0423040 | Msa0479170 | 0.808326 | 3.272575e-50 | -8.615850e-47 |
| Msa0423040 | Msa0479970 | 0.800361 | 1.494227e-48 | -8.615850e-47 |
| Msa0423040 | Msa0480000 | 0.848313 | 6.635568e-60 | -8.615850e-47 |
| Msa0423040 | Msa0484780 | 0.808196 | 3.487470e-50 | -8.615850e-47 |
| Msa0423040 | Msa0495320 | 0.807047 | 6.116332e-50 | -8.615850e-47 |
| Msa0423040 | Msa0498060 | 0.814352 | 1.609472e-51 | -8.615850e-47 |
| Msa0423040 | Msa0504240 | 0.801669 | 8.072499e-49 | -8.615850e-47 |
| Msa0423040 | Msa0505770 | 0.803348 | 3.638662e-49 | -8.615850e-47 |
| Msa0423040 | Msa0507680 | 0.865780 | 4.607681e-65 | -8.615850e-47 |
| Msa0423040 | Msa0508870 | 0.803547 | 3.308633e-49 | -8.615850e-47 |
| Msa0423040 | Msa0509610 | 0.842654 | 2.266760e-58 | -8.615850e-47 |
| Msa0423040 | Msa0511310 | 0.811142 | 8.114889e-51 | -8.615850e-47 |
| Msa0423040 | Msa0516040 | 0.826359 | 2.833425e-54 | -8.615850e-47 |
| Msa0423040 | Msa0516320 | 0.811583 | 6.511925e-51 | -8.615850e-47 |
| Msa0423040 | Msa0520710 | 0.808157 | 3.555138e-50 | -8.615850e-47 |
| Msa0423040 | Msa0537190 | 0.805453 | 1.324949e-49 | -8.615850e-47 |
| Msa0423040 | Msa0542160 | 0.808011 | 3.819024e-50 | -8.615850e-47 |
| Msa0423040 | Msa0544830 | 0.805783 | 1.129942e-49 | -8.615850e-47 |
| Msa0423040 | Msa0546680 | 0.820484 | 6.693477e-53 | -8.615850e-47 |
| Msa0423040 | Msa0547140 | 0.800242 | 1.579763e-48 | -8.615850e-47 |
| Msa0423040 | Msa0567020 | 0.828423 | 9.065718e-55 | -8.615850e-47 |
| Msa0423040 | Msa0574890 | 0.815183 | 1.053282e-51 | -8.615850e-47 |
| Msa0423040 | Msa0585300 | 0.805377 | 1.374574e-49 | -8.615850e-47 |
| Msa0423040 | Msa0604360 | 0.810107 | 1.358782e-50 | -8.615850e-47 |
| Msa0423040 | Msa0615870 | 0.817329 | 3.488695e-52 | -8.615850e-47 |
| Msa0423040 | Msa0616160 | 0.814867 | 1.237708e-51 | -8.615850e-47 |
| Msa0423040 | Msa0616220 | 0.803408 | 3.535901e-49 | -8.615850e-47 |
| Msa0423040 | Msa0619470 | 0.800146 | 1.652888e-48 | -8.615850e-47 |
| Msa0423040 | Msa0621490 | 0.800302 | 1.536272e-48 | -8.615850e-47 |
| Msa0423040 | Msa0638070 | 0.808120 | 3.620942e-50 | -8.615850e-47 |
| Msa0423040 | Msa0643180 | 0.827190 | 1.793947e-54 | -8.615850e-47 |
| Msa0423040 | Msa0647130 | 0.811814 | 5.799516e-51 | -8.615850e-47 |
| Msa0423040 | Msa0649980 | 0.802536 | 5.354635e-49 | -8.615850e-47 |
| Msa0423040 | Msa0658570 | 0.819818 | 9.509636e-53 | -8.615850e-47 |
| Msa0423040 | Msa0674580 | 0.803158 | 3.984407e-49 | -8.615850e-47 |
| Msa0423040 | Msa0682330 | 0.810686 | 1.019005e-50 | -8.615850e-47 |
| Msa0423040 | Msa0684500 | 0.803991 | 2.676501e-49 | -8.615850e-47 |
| Msa0423040 | Msa0689010 | 0.809364 | 1.963056e-50 | -8.615850e-47 |
| Msa0423040 | Msa0689800 | 0.804700 | 1.904924e-49 | -8.615850e-47 |
| Msa0423040 | Msa0691380 | 0.813750 | 2.185085e-51 | -8.615850e-47 |
| Msa0423040 | Msa0692230 | 0.832929 | 7.139761e-56 | -8.615850e-47 |
| Msa0423040 | Msa0693380 | 0.847010 | 1.514908e-59 | -8.615850e-47 |
| Msa0423040 | Msa0702340 | 0.807833 | 4.166178e-50 | -8.615850e-47 |
| Msa0423040 | Msa0702590 | 0.804993 | 1.654115e-49 | -8.615850e-47 |
| Msa0423040 | Msa0702660 | 0.808332 | 3.262472e-50 | -8.615850e-47 |
| Msa0423040 | Msa0703490 | 0.825064 | 5.746425e-54 | -8.615850e-47 |
| Msa0423040 | Msa0705870 | 0.801056 | 1.077760e-48 | -8.615850e-47 |
| Msa0423040 | Msa0708520 | 0.842932 | 1.911354e-58 | -8.615850e-47 |
| Msa0423040 | Msa0717020 | 0.801712 | 7.910037e-49 | -8.615850e-47 |
| Msa0423040 | Msa0720820 | 0.804391 | 2.209811e-49 | -8.615850e-47 |
| Msa0423040 | Msa0723990 | 0.831789 | 1.367461e-55 | -8.615850e-47 |
| Msa0423040 | Msa0725250 | 0.805151 | 1.533059e-49 | -8.615850e-47 |
| Msa0423040 | Msa0743200 | 0.817478 | 3.230102e-52 | -8.615850e-47 |
| Msa0423040 | Msa0743260 | 0.802189 | 6.314007e-49 | -8.615850e-47 |
| Msa0423040 | Msa0744040 | 0.807011 | 6.225234e-50 | -8.615850e-47 |
| Msa0423040 | Msa0752160 | 0.817604 | 3.025707e-52 | -8.615850e-47 |
| Msa0423040 | Msa0754720 | -0.809424 | 1.905290e-50 | -8.615850e-47 |
| Msa0423040 | Msa0756630 | -0.804008 | 2.654188e-49 | -8.615850e-47 |
| Msa0423040 | Msa0760380 | 0.857572 | 1.489963e-62 | -8.615850e-47 |
| Msa0423040 | Msa0764570 | 0.837161 | 6.119536e-57 | -8.615850e-47 |
| Msa0423040 | Msa0767300 | 0.810579 | 1.074627e-50 | -8.615850e-47 |
| Msa0423040 | Msa0778320 | 0.827766 | 1.305237e-54 | -8.615850e-47 |
| Msa0423040 | Msa0787260 | 0.811202 | 7.875827e-51 | -8.615850e-47 |
| Msa0423040 | Msa0787750 | 0.814677 | 1.364176e-51 | -8.615850e-47 |
| Msa0423040 | Msa0804680 | 0.811065 | 8.436049e-51 | -8.615850e-47 |
| Msa0423040 | Msa0814320 | 0.808682 | 2.746421e-50 | -8.615850e-47 |
| Msa0423040 | Msa0824660 | 0.801491 | 8.781552e-49 | -8.615850e-47 |
| Msa0423040 | Msa0824680 | 0.807731 | 4.379877e-50 | -8.615850e-47 |
| Msa0423040 | Msa0828560 | 0.817094 | 3.940793e-52 | -8.615850e-47 |
| Msa0423040 | Msa0829620 | 0.809751 | 1.620686e-50 | -8.615850e-47 |
| Msa0423040 | Msa0830530 | 0.814300 | 1.652827e-51 | -8.615850e-47 |
| Msa0423040 | Msa0840260 | 0.832405 | 9.632254e-56 | -8.615850e-47 |
| Msa0423040 | Msa0841940 | 0.801023 | 1.094979e-48 | -8.615850e-47 |
| Msa0423040 | Msa0843780 | -0.802254 | 6.121799e-49 | -8.615850e-47 |
| Msa0423040 | Msa0844240 | 0.837784 | 4.237024e-57 | -8.615850e-47 |
| Msa0423040 | Msa0850960 | 0.819018 | 1.447340e-52 | -8.615850e-47 |
| Msa0423040 | Msa0861510 | 0.807513 | 4.871769e-50 | -8.615850e-47 |
| Msa0423040 | Msa0861530 | 0.806501 | 7.977706e-50 | -8.615850e-47 |
| Msa0423040 | Msa0863370 | 0.835786 | 1.370243e-56 | -8.615850e-47 |
| Msa0423040 | Msa0863930 | 0.800185 | 1.622594e-48 | -8.615850e-47 |
| Msa0423040 | Msa0867890 | 0.808990 | 2.359942e-50 | -8.615850e-47 |
| Msa0423040 | Msa0876190 | 0.805648 | 1.205896e-49 | -8.615850e-47 |
| Msa0423040 | Msa0876200 | 0.800887 | 1.167301e-48 | -8.615850e-47 |
| Msa0423040 | Msa0878290 | 0.826038 | 3.377100e-54 | -8.615850e-47 |
| Msa0423040 | Msa0880140 | 0.815953 | 7.099112e-52 | -8.615850e-47 |
| Msa0423040 | Msa0888320 | 0.801485 | 8.807985e-49 | -8.615850e-47 |
| Msa0423040 | Msa0888530 | 0.826465 | 2.672620e-54 | -8.615850e-47 |
| Msa0423040 | Msa0930780 | 0.845529 | 3.837344e-59 | -8.615850e-47 |
| Msa0423040 | Msa0938480 | 0.802078 | 6.655096e-49 | -8.615850e-47 |
| Msa0423040 | Msa0944190 | 0.828843 | 7.175590e-55 | -8.615850e-47 |
| Msa0423040 | Msa0959360 | 0.806234 | 9.082194e-50 | -8.615850e-47 |
| Msa0423040 | Msa0990590 | 0.806278 | 8.891378e-50 | -8.615850e-47 |
| Msa0423040 | Msa0993290 | 0.823611 | 1.261777e-53 | -8.615850e-47 |
| Msa0423040 | Msa0993600 | 0.827111 | 1.873341e-54 | -8.615850e-47 |
| Msa0423040 | Msa1013770 | 0.819394 | 1.188452e-52 | -8.615850e-47 |
| Msa0423040 | Msa1029250 | 0.802086 | 6.627990e-49 | -8.615850e-47 |
| Msa0423040 | Msa1031930 | 0.810331 | 1.215531e-50 | -8.615850e-47 |
| Msa0423040 | Msa1040120 | 0.831637 | 1.491056e-55 | -8.615850e-47 |
| Msa0423040 | Msa1040400 | 0.806738 | 7.108851e-50 | -8.615850e-47 |
| Msa0423040 | Msa1040890 | 0.805814 | 1.112861e-49 | -8.615850e-47 |
| Msa0423040 | Msa1063950 | 0.809126 | 2.207816e-50 | -8.615850e-47 |
| Msa0423040 | Msa1075220 | -0.818210 | 2.207597e-52 | -8.615850e-47 |
| Msa0423040 | Msa1082500 | 0.827548 | 1.472568e-54 | -8.615850e-47 |
| Msa0423040 | Msa1082700 | 0.816496 | 5.367470e-52 | -8.615850e-47 |
| Msa0423040 | Msa1083210 | 0.816949 | 4.247191e-52 | -8.615850e-47 |
| Msa0423040 | Msa1085200 | 0.867756 | 1.082469e-65 | -8.615850e-47 |
| Msa0423040 | Msa1097640 | 0.800187 | 1.621242e-48 | -8.615850e-47 |
| Msa0423040 | Msa1108160 | 0.805581 | 1.245557e-49 | -8.615850e-47 |
| Msa0423040 | Msa1111110 | 0.854880 | 9.163991e-62 | -8.615850e-47 |
| Msa0423040 | Msa1111130 | 0.811019 | 8.631072e-51 | -8.615850e-47 |
| Msa0423040 | Msa1116130 | -0.826069 | 3.320767e-54 | -8.615850e-47 |
| Msa0423040 | Msa1121440 | 0.819064 | 1.412691e-52 | -8.615850e-47 |
| Msa0423040 | Msa1125470 | 0.820550 | 6.465085e-53 | -8.615850e-47 |
| Msa0423040 | Msa1125550 | 0.817151 | 3.825799e-52 | -8.615850e-47 |
| Msa0423040 | Msa1127650 | 0.817708 | 2.865672e-52 | -8.615850e-47 |
| Msa0423040 | Msa1127890 | 0.815296 | 9.942852e-52 | -8.615850e-47 |
| Msa0423040 | Msa1131220 | 0.804376 | 2.225183e-49 | -8.615850e-47 |
| Msa0423040 | Msa1154710 | 0.802918 | 4.467153e-49 | -8.615850e-47 |
| Msa0423040 | Msa1163540 | 0.804468 | 2.129682e-49 | -8.615850e-47 |
| Msa0423040 | Msa1163650 | -0.803353 | 3.629501e-49 | -8.615850e-47 |
| Msa0423040 | Msa1165870 | 0.817420 | 3.327794e-52 | -8.615850e-47 |
| Msa0423040 | Msa1171870 | 0.814417 | 1.556949e-51 | -8.615850e-47 |
| Msa0423040 | Msa1179940 | 0.830982 | 2.160545e-55 | -8.615850e-47 |
| Msa0423040 | Msa1179970 | 0.824818 | 6.566940e-54 | -8.615850e-47 |
| Msa0423040 | Msa1203250 | 0.812508 | 4.091827e-51 | -8.615850e-47 |
| Msa0423040 | Msa1208890 | -0.807231 | 5.591193e-50 | -8.615850e-47 |
| Msa0423040 | Msa1222970 | 0.804661 | 1.940705e-49 | -8.615850e-47 |
| Msa0423040 | Msa1224840 | 0.808455 | 3.070571e-50 | -8.615850e-47 |
| Msa0423040 | Msa1228210 | 0.801660 | 8.109067e-49 | -8.615850e-47 |
| Msa0423040 | Msa1236100 | 0.832942 | 7.087873e-56 | -8.615850e-47 |
| Msa0423040 | Msa1240310 | 0.810877 | 9.263847e-51 | -8.615850e-47 |
| Msa0423040 | Msa1242230 | 0.826793 | 2.232498e-54 | -8.615850e-47 |
| Msa0423040 | Msa1242240 | 0.846847 | 1.679188e-59 | -8.615850e-47 |
| Msa0423040 | Msa1245940 | -0.802443 | 5.597215e-49 | -8.615850e-47 |
| Msa0423040 | Msa1252190 | 0.810846 | 9.409967e-51 | -8.615850e-47 |
| Msa0423040 | Msa1254510 | 0.838868 | 2.226648e-57 | -8.615850e-47 |
| Msa0423040 | Msa1259070 | -0.805991 | 1.021820e-49 | -8.615850e-47 |
| Msa0423040 | Msa1264020 | 0.827953 | 1.176389e-54 | -8.615850e-47 |
| Msa0423040 | Msa1270610 | 0.838713 | 2.442417e-57 | -8.615850e-47 |
| Msa0423040 | Msa1276190 | 0.801932 | 7.129653e-49 | -8.615850e-47 |
| Msa0423040 | Msa1283840 | 0.855168 | 7.558394e-62 | -8.615850e-47 |
| Msa0423040 | Msa1283860 | 0.804796 | 1.818514e-49 | -8.615850e-47 |
| Msa0423040 | Msa1283990 | 0.806323 | 8.699230e-50 | -8.615850e-47 |
| Msa0423040 | Msa1284260 | 0.846997 | 1.527866e-59 | -8.615850e-47 |
| Msa0423040 | Msa1291890 | 0.802378 | 5.772553e-49 | -8.615850e-47 |
| Msa0423040 | Msa1292830 | 0.827889 | 1.219052e-54 | -8.615850e-47 |
| Msa0423040 | Msa1306430 | 0.810228 | 1.279307e-50 | -8.615850e-47 |
| Msa0423040 | Msa1308380 | 0.817537 | 3.132902e-52 | -8.615850e-47 |
| Msa0423040 | Msa1314100 | 0.808984 | 2.367756e-50 | -8.615850e-47 |
| Msa0423040 | Msa1319650 | 0.806917 | 6.515936e-50 | -8.615850e-47 |
| Msa0423040 | Msa1320410 | 0.803503 | 3.380124e-49 | -8.615850e-47 |
| Msa0423040 | Msa1320740 | 0.823938 | 1.057804e-53 | -8.615850e-47 |
| Msa0423040 | Msa1322860 | 0.826833 | 2.183485e-54 | -8.615850e-47 |
| Msa0423040 | Msa1322890 | 0.801652 | 8.140128e-49 | -8.615850e-47 |
| Msa0423040 | Msa1327050 | 0.840351 | 9.164602e-58 | -8.615850e-47 |
| Msa0423040 | Msa1338200 | 0.802300 | 5.990182e-49 | -8.615850e-47 |
| Msa0423040 | Msa1340260 | 0.820696 | 5.985374e-53 | -8.615850e-47 |
| Msa0423040 | Msa1340650 | 0.823009 | 1.744821e-53 | -8.615850e-47 |
| Msa0423040 | Msa1343070 | 0.865881 | 4.280072e-65 | -8.615850e-47 |
| Msa0423040 | Msa1346370 | 0.800128 | 1.666871e-48 | -8.615850e-47 |
| Msa0423040 | Msa1348880 | 0.800552 | 1.365942e-48 | -8.615850e-47 |
| Msa0423040 | Msa1351730 | 0.816452 | 5.491496e-52 | -8.615850e-47 |
| Msa0423040 | Msa1357530 | 0.832530 | 8.969342e-56 | -8.615850e-47 |
| Msa0423040 | Msa1366600 | 0.802199 | 6.283937e-49 | -8.615850e-47 |
| Msa0423040 | Msa1371430 | 0.846315 | 2.345916e-59 | -8.615850e-47 |
| Msa0423040 | Msa1375560 | 0.809425 | 1.904457e-50 | -8.615850e-47 |
| Msa0423040 | Msa1376090 | -0.808065 | 3.719078e-50 | -8.615850e-47 |
| Msa0423040 | Msa1376890 | 0.822432 | 2.376818e-53 | -8.615850e-47 |
| Msa0423040 | Msa1377540 | -0.803560 | 3.288795e-49 | -8.615850e-47 |
| Msa0423040 | Msa1384350 | 0.838078 | 3.561279e-57 | -8.615850e-47 |
| Msa0423040 | Msa1386230 | 0.841244 | 5.344588e-58 | -8.615850e-47 |
| Msa0423040 | Msa1390800 | 0.800134 | 1.661839e-48 | -8.615850e-47 |
| Msa0423040 | Msa1404540 | 0.807746 | 4.347194e-50 | -8.615850e-47 |
| Msa0423040 | Msa1409870 | 0.818298 | 2.108441e-52 | -8.615850e-47 |
| Msa0423040 | Msa1415640 | 0.851578 | 8.101944e-61 | -8.615850e-47 |
| Msa0423040 | Msa1417870 | 0.808161 | 3.548746e-50 | -8.615850e-47 |
| Msa0423040 | Msa1422580 | 0.808240 | 3.413075e-50 | -8.615850e-47 |
| Msa0423040 | Msa1423350 | 0.819326 | 1.231946e-52 | -8.615850e-47 |
| Msa0423040 | Msa1427060 | 0.805248 | 1.463277e-49 | -8.615850e-47 |
| Msa0423040 | Msa1427760 | 0.819131 | 1.364562e-52 | -8.615850e-47 |
| Msa0423040 | Msa1431060 | 0.801673 | 8.057314e-49 | -8.615850e-47 |
| Msa0423040 | Msa1445610 | -0.809332 | 1.993824e-50 | -8.615850e-47 |
| Msa0423040 | Msa1446830 | 0.806578 | 7.685564e-50 | -8.615850e-47 |
| Msa0423040 | Msa1448510 | 0.834282 | 3.280119e-56 | -8.615850e-47 |
| Msa0423040 | Msa1454120 | 0.810191 | 1.303070e-50 | -8.615850e-47 |
| Msa0423040 | Msa1459180 | 0.915167 | 8.117158e-85 | -8.615850e-47 |
| Msa0423040 | Msa1460020 | 0.840164 | 1.025602e-57 | -8.615850e-47 |
| Msa0242680 | Msa0423040 | 0.829206 | 5.859363e-55 | -8.615850e-47 |
| Msa0243100 | Msa0423040 | 0.812704 | 3.707469e-51 | -8.615850e-47 |
| Msa0243710 | Msa0423040 | 0.805867 | 1.084739e-49 | -8.615850e-47 |
| Msa0244860 | Msa0423040 | 0.806355 | 8.563373e-50 | -8.615850e-47 |
| Msa0246430 | Msa0423040 | 0.803927 | 2.759497e-49 | -8.615850e-47 |
| Msa0248980 | Msa0423040 | 0.800326 | 1.519136e-48 | -8.615850e-47 |
| Msa0258880 | Msa0423040 | -0.804472 | 2.125370e-49 | -8.615850e-47 |
| Msa0259500 | Msa0423040 | 0.804637 | 1.963025e-49 | -8.615850e-47 |
| Msa0262340 | Msa0423040 | 0.803289 | 3.742394e-49 | -8.615850e-47 |
| Msa0264350 | Msa0423040 | 0.814316 | 1.639536e-51 | -8.615850e-47 |
| Msa0272690 | Msa0423040 | 0.828807 | 7.320630e-55 | -8.615850e-47 |
| Msa0282250 | Msa0423040 | 0.812643 | 3.823466e-51 | -8.615850e-47 |
| Msa0283450 | Msa0423040 | 0.817085 | 3.960187e-52 | -8.615850e-47 |
| Msa0283520 | Msa0423040 | 0.821161 | 4.676574e-53 | -8.615850e-47 |
| Msa0287650 | Msa0423040 | 0.837825 | 4.135405e-57 | -8.615850e-47 |
| Msa0292120 | Msa0423040 | 0.805516 | 1.285591e-49 | -8.615850e-47 |
| Msa0294390 | Msa0423040 | 0.813463 | 2.527571e-51 | -8.615850e-47 |
| Msa0300690 | Msa0423040 | 0.812562 | 3.983843e-51 | -8.615850e-47 |
| Msa0305700 | Msa0423040 | 0.812869 | 3.411838e-51 | -8.615850e-47 |
| Msa0306710 | Msa0423040 | 0.804923 | 1.710647e-49 | -8.615850e-47 |
| Msa0306720 | Msa0423040 | 0.801421 | 9.077618e-49 | -8.615850e-47 |
| Msa0311860 | Msa0423040 | 0.838681 | 2.488517e-57 | -8.615850e-47 |
| Msa0317250 | Msa0423040 | 0.808355 | 3.225295e-50 | -8.615850e-47 |
| Msa0320100 | Msa0423040 | 0.806726 | 7.150601e-50 | -8.615850e-47 |
| Msa0332000 | Msa0423040 | 0.813100 | 3.036728e-51 | -8.615850e-47 |
| Msa0332920 | Msa0423040 | 0.819132 | 1.363401e-52 | -8.615850e-47 |
| Msa0333720 | Msa0423040 | -0.800651 | 1.304318e-48 | -8.615850e-47 |
| Msa0334350 | Msa0423040 | 0.828520 | 8.590759e-55 | -8.615850e-47 |
| Msa0335040 | Msa0423040 | 0.820188 | 7.827632e-53 | -8.615850e-47 |
| Msa0341540 | Msa0423040 | 0.806694 | 7.265285e-50 | -8.615850e-47 |
| Msa0356890 | Msa0423040 | -0.815874 | 7.393041e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423040 | MtrunA17_Chr3g0123691 | 98.675 | 302 | 3 | 1 | 1 | 301 | 1 | 302 | 0.0 | 611 |
| Msa0423040 | MtrunA17_Chr8g0381741 | 59.021 | 327 | 92 | 11 | 1 | 301 | 1 | 311 | 6.23e-117 | 339 |
| Msa0423040 | MtrunA17_Chr3g0119291 | 41.638 | 293 | 132 | 7 | 1 | 292 | 1 | 255 | 4.30e-50 | 166 |
| Msa0423040 | MtrunA17_Chr5g0415941 | 57.258 | 124 | 49 | 1 | 45 | 164 | 69 | 192 | 2.22e-39 | 140 |
| Msa0423040 | MtrunA17_Chr8g0362751 | 57.377 | 122 | 48 | 1 | 47 | 168 | 81 | 198 | 3.00e-39 | 139 |
| Msa0423040 | MtrunA17_Chr8g0362151 | 51.656 | 151 | 60 | 4 | 25 | 165 | 33 | 180 | 6.48e-39 | 138 |
| Msa0423040 | MtrunA17_Chr5g0416391 | 57.500 | 120 | 48 | 1 | 46 | 165 | 64 | 180 | 2.63e-37 | 134 |
| Msa0423040 | MtrunA17_Chr4g0060031 | 59.459 | 111 | 45 | 0 | 50 | 160 | 86 | 196 | 5.39e-37 | 134 |
| Msa0423040 | MtrunA17_Chr6g0450991 | 62.264 | 106 | 40 | 0 | 58 | 163 | 66 | 171 | 1.41e-36 | 132 |
| Msa0423040 | MtrunA17_Chr6g0453021 | 61.856 | 97 | 37 | 0 | 58 | 154 | 95 | 191 | 1.94e-35 | 129 |
| Msa0423040 | MtrunA17_Chr7g0217111 | 59.794 | 97 | 39 | 0 | 58 | 154 | 79 | 175 | 2.96e-30 | 115 |
| Msa0423040 | MtrunA17_Chr7g0265521 | 40.571 | 175 | 90 | 4 | 35 | 209 | 41 | 201 | 5.32e-29 | 110 |
| Msa0423040 | MtrunA17_Chr8g0346251 | 36.702 | 188 | 106 | 5 | 66 | 241 | 48 | 234 | 4.99e-26 | 103 |
| Msa0423040 | MtrunA17_Chr3g0127511 | 50.549 | 91 | 45 | 0 | 61 | 151 | 40 | 130 | 5.66e-25 | 100 |
| Msa0423040 | MtrunA17_Chr1g0179581 | 50.000 | 92 | 39 | 1 | 58 | 149 | 27 | 111 | 1.43e-24 | 95.5 |
| Msa0423040 | MtrunA17_Chr5g0403691 | 48.182 | 110 | 57 | 0 | 51 | 160 | 45 | 154 | 7.98e-23 | 94.0 |
| Msa0423040 | MtrunA17_Chr5g0403701 | 57.317 | 82 | 35 | 0 | 51 | 132 | 45 | 126 | 8.25e-23 | 93.6 |
| Msa0423040 | MtrunA17_Chr4g0055851 | 41.406 | 128 | 67 | 2 | 51 | 178 | 112 | 231 | 1.32e-18 | 84.0 |
| Msa0423040 | MtrunA17_Chr1g0151971 | 42.500 | 120 | 62 | 1 | 59 | 178 | 130 | 242 | 1.27e-17 | 81.3 |
| Msa0423040 | MtrunA17_Chr2g0308611 | 36.879 | 141 | 78 | 3 | 56 | 195 | 197 | 327 | 3.65e-17 | 80.5 |
| Msa0423040 | MtrunA17_Chr4g0054421 | 41.085 | 129 | 65 | 3 | 51 | 178 | 119 | 237 | 8.23e-17 | 78.6 |
| Msa0423040 | MtrunA17_Chr5g0399491 | 40.625 | 128 | 68 | 2 | 51 | 178 | 128 | 247 | 1.66e-16 | 78.2 |
| Msa0423040 | MtrunA17_Chr1g0175651 | 37.063 | 143 | 81 | 2 | 42 | 184 | 137 | 270 | 2.43e-16 | 77.8 |
| Msa0423040 | MtrunA17_Chr5g0400781 | 42.718 | 103 | 52 | 1 | 51 | 153 | 115 | 210 | 6.11e-16 | 76.3 |
| Msa0423040 | MtrunA17_Chr8g0335131 | 41.322 | 121 | 61 | 3 | 59 | 178 | 146 | 257 | 1.35e-15 | 75.9 |
| Msa0423040 | MtrunA17_Chr4g0044091 | 41.346 | 104 | 53 | 2 | 54 | 156 | 60 | 156 | 1.94e-15 | 73.6 |
| Msa0423040 | MtrunA17_Chr7g0258831 | 36.478 | 159 | 80 | 4 | 32 | 178 | 121 | 270 | 7.33e-15 | 73.6 |
| Msa0423040 | MtrunA17_Chr4g0071411 | 45.055 | 91 | 43 | 1 | 62 | 152 | 91 | 174 | 8.17e-15 | 72.0 |
| Msa0423040 | MtrunA17_Chr3g0135331 | 50.000 | 72 | 36 | 0 | 59 | 130 | 145 | 216 | 1.03e-12 | 67.4 |
| Msa0423040 | MtrunA17_Chr2g0299031 | 37.288 | 118 | 64 | 3 | 42 | 156 | 63 | 173 | 1.46e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423040 | AT4G40060.1 | 47.284 | 313 | 134 | 15 | 1 | 301 | 1 | 294 | 1.44e-70 | 220 |
| Msa0423040 | AT2G22430.1 | 45.181 | 332 | 129 | 14 | 1 | 301 | 2 | 311 | 5.82e-63 | 201 |
| Msa0423040 | AT5G65310.1 | 42.296 | 331 | 141 | 12 | 1 | 301 | 1 | 311 | 5.63e-62 | 199 |
| Msa0423040 | AT5G65310.2 | 44.097 | 288 | 117 | 9 | 38 | 301 | 26 | 293 | 1.65e-60 | 194 |
| Msa0423040 | AT3G01470.1 | 63.810 | 105 | 37 | 1 | 58 | 161 | 67 | 171 | 4.47e-38 | 136 |
| Msa0423040 | AT1G69780.1 | 55.000 | 120 | 51 | 1 | 46 | 165 | 72 | 188 | 1.83e-36 | 132 |
| Msa0423040 | AT5G15150.1 | 48.428 | 159 | 78 | 2 | 42 | 197 | 95 | 252 | 6.22e-36 | 131 |
| Msa0423040 | AT3G01220.1 | 53.982 | 113 | 50 | 1 | 44 | 154 | 70 | 182 | 1.49e-32 | 122 |
| Msa0423040 | AT2G46680.1 | 40.123 | 162 | 91 | 2 | 50 | 205 | 23 | 184 | 3.61e-30 | 115 |
| Msa0423040 | AT1G26960.1 | 44.138 | 145 | 74 | 2 | 57 | 201 | 69 | 206 | 2.59e-29 | 112 |
| Msa0423040 | AT2G46680.2 | 40.000 | 160 | 92 | 2 | 50 | 205 | 23 | 182 | 3.63e-29 | 112 |
| Msa0423040 | AT3G61890.1 | 48.936 | 94 | 48 | 0 | 62 | 155 | 33 | 126 | 4.94e-26 | 103 |
| Msa0423040 | AT1G27045.1 | 49.565 | 115 | 58 | 0 | 45 | 159 | 54 | 168 | 9.68e-26 | 102 |
| Msa0423040 | AT1G27045.5 | 49.565 | 115 | 58 | 0 | 45 | 159 | 11 | 125 | 1.70e-25 | 100 |
| Msa0423040 | AT1G27045.3 | 49.565 | 115 | 58 | 0 | 45 | 159 | 11 | 125 | 1.70e-25 | 100 |
| Msa0423040 | AT1G27045.2 | 49.565 | 115 | 58 | 0 | 45 | 159 | 3 | 117 | 2.00e-25 | 100 |
| Msa0423040 | AT5G03790.1 | 43.200 | 125 | 55 | 3 | 59 | 180 | 77 | 188 | 5.88e-25 | 100 |
| Msa0423040 | AT1G27045.4 | 49.533 | 107 | 54 | 0 | 45 | 151 | 54 | 160 | 7.45e-24 | 98.2 |
| Msa0423040 | AT5G03790.2 | 50.000 | 90 | 38 | 1 | 59 | 148 | 77 | 159 | 1.05e-22 | 93.6 |
| Msa0423040 | AT4G36740.2 | 46.789 | 109 | 51 | 1 | 52 | 160 | 49 | 150 | 2.05e-21 | 90.5 |
| Msa0423040 | AT4G36740.1 | 46.789 | 109 | 51 | 1 | 52 | 160 | 48 | 149 | 2.21e-21 | 90.5 |
| Msa0423040 | AT2G18550.1 | 44.275 | 131 | 58 | 3 | 46 | 173 | 50 | 168 | 2.68e-21 | 90.5 |
| Msa0423040 | AT5G66700.1 | 60.811 | 74 | 29 | 0 | 59 | 132 | 71 | 144 | 3.43e-21 | 90.1 |
| Msa0423040 | AT2G36610.1 | 39.535 | 129 | 61 | 3 | 38 | 158 | 52 | 171 | 1.06e-20 | 87.8 |
| Msa0423040 | AT5G53980.1 | 53.521 | 71 | 33 | 0 | 59 | 129 | 11 | 81 | 4.65e-17 | 77.4 |
| Msa0423040 | AT2G01430.1 | 38.129 | 139 | 73 | 5 | 42 | 179 | 122 | 248 | 2.14e-16 | 78.2 |
| Msa0423040 | AT4G16780.1 | 39.062 | 128 | 70 | 2 | 51 | 178 | 121 | 240 | 2.92e-16 | 77.8 |
| Msa0423040 | AT4G37790.1 | 42.718 | 103 | 52 | 1 | 51 | 153 | 118 | 213 | 6.12e-16 | 76.6 |
| Msa0423040 | AT2G22800.1 | 44.660 | 103 | 50 | 1 | 51 | 153 | 105 | 200 | 1.34e-15 | 75.9 |
| Msa0423040 | AT5G06710.1 | 35.758 | 165 | 81 | 5 | 57 | 221 | 188 | 327 | 3.80e-15 | 75.1 |
| Msa0423040 | AT4G17460.1 | 43.000 | 100 | 50 | 1 | 54 | 153 | 130 | 222 | 1.81e-14 | 72.8 |
| Msa0423040 | AT5G47370.1 | 42.718 | 103 | 52 | 1 | 51 | 153 | 122 | 217 | 2.28e-14 | 72.4 |
| Msa0423040 | AT2G44910.1 | 39.167 | 120 | 65 | 2 | 59 | 178 | 163 | 274 | 9.26e-14 | 70.9 |
| Msa0423040 | AT3G60390.1 | 38.525 | 122 | 67 | 2 | 57 | 178 | 160 | 273 | 5.66e-13 | 68.6 |
| Msa0423040 | AT2G01430.2 | 45.714 | 70 | 38 | 0 | 42 | 111 | 122 | 191 | 8.78e-11 | 60.8 |
Find 94 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAGCTTCTCTTTCCTTTC+AGG | 0.097054 | 3_2:+72690679 | None:intergenic |
| CAGTAAAATTATTGTTATTA+TGG | 0.162010 | 3_2:+72691373 | None:intergenic |
| TCCATCTTGCTCTCCTGTTT+TGG | 0.182991 | 3_2:+72690614 | None:intergenic |
| TCTTCACATGATAAGATTTC+TGG | 0.185572 | 3_2:+72689605 | None:intergenic |
| ATTCACTAACGTTGTTAATA+AGG | 0.215659 | 3_2:-72691172 | Msa0423040:five_prime_UTR |
| GAAGGATGGTTTGGGGATTA+AGG | 0.218412 | 3_2:-72689246 | Msa0423040:three_prime_UTR |
| GTCATAATCCAATTGATCTT+TGG | 0.265734 | 3_2:+72689804 | None:intergenic |
| TTGGGGATTAAGGTTGATTA+TGG | 0.283878 | 3_2:-72689236 | Msa0423040:three_prime_UTR |
| TAAAATTAAAAGCAACAAAA+AGG | 0.286015 | 3_2:-72689484 | Msa0423040:three_prime_UTR |
| CCATACACATGTTTGTTCCT+TGG | 0.325978 | 3_2:+72690850 | None:intergenic |
| CAATTCATGGAGGAAGATTC+AGG | 0.342389 | 3_2:+72689637 | None:intergenic |
| GGAATTGATGTTTCTGAAGA+TGG | 0.346885 | 3_2:+72689838 | None:intergenic |
| AAGCAGTTGGAAAGAGATTA+TGG | 0.350992 | 3_2:-72690586 | Msa0423040:CDS |
| TATGTGTATGAATTGTTTGA+TGG | 0.356725 | 3_2:-72691240 | Msa0423040:five_prime_UTR |
| TTCAGAATCCAAAGATCAAT+TGG | 0.360161 | 3_2:-72689812 | Msa0423040:CDS |
| TAGCTGTTTGGTTCCAAAAC+AGG | 0.367018 | 3_2:-72690627 | Msa0423040:CDS |
| TGGCAGCTAGAAGGATGGTT+TGG | 0.371333 | 3_2:-72689255 | Msa0423040:three_prime_UTR |
| ATTAATGATTAACCTGTTGA+TGG | 0.378350 | 3_2:+72691022 | None:intergenic |
| TCCAGCGCAATTTCTTCATC+CGG | 0.382294 | 3_2:-72689694 | Msa0423040:CDS |
| GGCAGCTAGAAGGATGGTTT+GGG | 0.382980 | 3_2:-72689254 | Msa0423040:three_prime_UTR |
| TGATCTTTGGATTCTGAACT+AGG | 0.386464 | 3_2:+72689817 | None:intergenic |
| GAGAAGCTTGCCATTGAACT+TGG | 0.393138 | 3_2:-72690667 | Msa0423040:CDS |
| CATCAAAGGTAGCAAAACTA+TGG | 0.403079 | 3_2:-72689332 | Msa0423040:three_prime_UTR |
| AGTGGATCAAGTTAAGGCTT+TGG | 0.405768 | 3_2:-72690734 | Msa0423040:CDS |
| GTCTCTTCATGAGTGAAAAT+AGG | 0.405791 | 3_2:+72691089 | None:intergenic |
| GGCTGCTTGTGGCAGCTAGA+AGG | 0.420107 | 3_2:-72689264 | Msa0423040:three_prime_UTR |
| AGCCTAGACAAGTAGCTGTT+TGG | 0.421533 | 3_2:-72690639 | Msa0423040:CDS |
| CTGGTACTGGAAACAATTCA+TGG | 0.434538 | 3_2:+72689624 | None:intergenic |
| CCAGCGCAATTTCTTCATCC+GGG | 0.438421 | 3_2:-72689693 | Msa0423040:CDS |
| ATTAAGGTTGATTATGGCTC+TGG | 0.439163 | 3_2:-72689230 | Msa0423040:three_prime_UTR |
| AAGAAAAGAACAGAAGGGTT+GGG | 0.440047 | 3_2:-72689290 | Msa0423040:three_prime_UTR |
| GAAGGGTGTGTTGAAGAAAC+TGG | 0.440606 | 3_2:-72690787 | Msa0423040:CDS |
| TGGCTGGTTTGGTTGCTTTG+TGG | 0.441997 | 3_2:-72689369 | Msa0423040:three_prime_UTR |
| ATCACAATCTCTCCATCAAC+AGG | 0.446409 | 3_2:-72691034 | Msa0423040:intron |
| CATGATAAGATTTCTGGTAC+TGG | 0.447688 | 3_2:+72689611 | None:intergenic |
| AGACTTGAAAGACGGTTCTT+CGG | 0.453631 | 3_2:-72689725 | Msa0423040:CDS |
| GAACCGTCTTTCAAGTCTAC+TGG | 0.456218 | 3_2:+72689730 | None:intergenic |
| TTGGATGGATTTGAAGAAGA+AGG | 0.464593 | 3_2:-72690805 | Msa0423040:CDS |
| AAGTTTATTAGTTTAATTGT+GGG | 0.470049 | 3_2:-72691271 | Msa0423040:five_prime_UTR |
| ACTAAGAGTGGATCAAGTTA+AGG | 0.482047 | 3_2:-72690740 | Msa0423040:CDS |
| TAAGTTTATTAGTTTAATTG+TGG | 0.483088 | 3_2:-72691272 | Msa0423040:five_prime_UTR |
| TTTCAATCAATGATGTTGGA+TGG | 0.484310 | 3_2:-72690820 | Msa0423040:CDS |
| ATTATAAGATTATGATATGA+TGG | 0.488238 | 3_2:+72691422 | None:intergenic |
| TGAAGAAGAATCTGAGGTGT+TGG | 0.489416 | 3_2:+72691066 | None:intergenic |
| CCAAGGAACAAACATGTGTA+TGG | 0.493903 | 3_2:-72690850 | Msa0423040:CDS |
| GGTCAGGACAGTACCATTGT+AGG | 0.494776 | 3_2:+72689515 | None:intergenic |
| AACAACAATGATGTTGGTAT+TGG | 0.500792 | 3_2:-72689772 | Msa0423040:CDS |
| GAACAAACATGTGTATGGTA+TGG | 0.501372 | 3_2:-72690845 | Msa0423040:CDS |
| AGGAGTTGAAGAAGAATCTG+AGG | 0.515030 | 3_2:+72691060 | None:intergenic |
| AGAAAAGAACAGAAGGGTTG+GGG | 0.518033 | 3_2:-72689289 | Msa0423040:three_prime_UTR |
| GGAGTTTCAATCAATGATGT+TGG | 0.518927 | 3_2:-72690824 | Msa0423040:CDS |
| AGGGAGATTGATTAGAGCAA+AGG | 0.520526 | 3_2:+72691445 | None:intergenic |
| GAAGAAAAGAACAGAAGGGT+TGG | 0.521749 | 3_2:-72689291 | Msa0423040:three_prime_UTR |
| GAAGAAGAATCTGAGGTGTT+GGG | 0.524763 | 3_2:+72691067 | None:intergenic |
| GAATTGATGTTTCTGAAGAT+GGG | 0.525493 | 3_2:+72689839 | None:intergenic |
| GAAATCTTATCATGTGAAGA+TGG | 0.526190 | 3_2:-72689602 | Msa0423040:CDS |
| CCCGGATGAAGAAATTGCGC+TGG | 0.538230 | 3_2:+72689693 | None:intergenic |
| AAGGAATTGAAATCAAAGCT+TGG | 0.543819 | 3_2:-72689943 | Msa0423040:CDS |
| AGCAAAGGATGTGAACCAGC+GGG | 0.545948 | 3_2:+72691460 | None:intergenic |
| AGGCTGCAATCCAAGTTCAA+TGG | 0.549394 | 3_2:+72690657 | None:intergenic |
| AAGATTCAGGAGACAACAAA+AGG | 0.555354 | 3_2:+72689650 | None:intergenic |
| TTTCTTAAAGAGATGTTGCA+AGG | 0.555636 | 3_2:-72689433 | Msa0423040:three_prime_UTR |
| ATAAGATTATGATATGATGG+AGG | 0.555805 | 3_2:+72691425 | None:intergenic |
| ATAATCAACAACAATGATGT+TGG | 0.562748 | 3_2:-72689778 | Msa0423040:CDS |
| AAAACAAGCTTGAACCTGAA+AGG | 0.570660 | 3_2:-72690693 | Msa0423040:CDS |
| GCTTGTGGCAGCTAGAAGGA+TGG | 0.572317 | 3_2:-72689260 | Msa0423040:three_prime_UTR |
| CAGCGCAATTTCTTCATCCG+GGG | 0.572338 | 3_2:-72689692 | Msa0423040:CDS |
| GGACAGTACCATTGTAGGGT+TGG | 0.574109 | 3_2:+72689520 | None:intergenic |
| TCCAAAACAGGAGAGCAAGA+TGG | 0.577020 | 3_2:-72690615 | Msa0423040:CDS |
| CATGTGAAGAAAAGAACAGA+AGG | 0.577611 | 3_2:-72689296 | Msa0423040:three_prime_UTR |
| TAAGATTATGATATGATGGA+GGG | 0.581180 | 3_2:+72691426 | None:intergenic |
| GGGTTGGGGAAGGCTGCTTG+TGG | 0.583859 | 3_2:-72689275 | Msa0423040:three_prime_UTR |
| GAAGAAACGTAGACTAAGAG+TGG | 0.584527 | 3_2:-72690752 | Msa0423040:CDS |
| GTCAGGACAGTACCATTGTA+GGG | 0.584883 | 3_2:+72689516 | None:intergenic |
| AATTGTTTGATGGATGAAGT+AGG | 0.588999 | 3_2:-72691230 | Msa0423040:five_prime_UTR |
| AACCAAACAGCTACTTGTCT+AGG | 0.590010 | 3_2:+72690637 | None:intergenic |
| CAATTTCTTAAGTGCCGATG+AGG | 0.590118 | 3_2:-72689572 | Msa0423040:CDS |
| TGGATGGATTTGAAGAAGAA+GGG | 0.596251 | 3_2:-72690804 | Msa0423040:CDS |
| TTTCCAGTAGACTTGAAAGA+CGG | 0.606889 | 3_2:-72689733 | Msa0423040:CDS |
| AAGATGGAAGACTAAGCAGT+TGG | 0.608505 | 3_2:-72690599 | Msa0423040:CDS |
| AAGAACAGAAGGGTTGGGGA+AGG | 0.618007 | 3_2:-72689285 | Msa0423040:three_prime_UTR |
| TGATATGAATAATTACTATG+TGG | 0.621942 | 3_2:-72689205 | Msa0423040:three_prime_UTR |
| ATTTAGAGGAACATAGTCCA+AGG | 0.623460 | 3_2:-72690867 | Msa0423040:intron |
| TTCATCACAAGATTCAAGCA+TGG | 0.624852 | 3_2:+72689873 | None:intergenic |
| AATGGTACTGTCCTGACCAG+TGG | 0.629087 | 3_2:-72689510 | Msa0423040:CDS |
| CTGCTGACTCTGAAGAACCC+CGG | 0.637223 | 3_2:+72689675 | None:intergenic |
| AGCAAGCACCAACCCTACAA+TGG | 0.659727 | 3_2:-72689528 | Msa0423040:CDS |
| ATCTTATCATGTGAAGATGG+AGG | 0.661383 | 3_2:-72689599 | Msa0423040:CDS |
| ATCAAACAATTCATACACAT+AGG | 0.664098 | 3_2:+72691242 | None:intergenic |
| ATGTGAAGAAAAGAACAGAA+GGG | 0.686206 | 3_2:-72689295 | Msa0423040:three_prime_UTR |
| GCAGCTAGAAGGATGGTTTG+GGG | 0.687322 | 3_2:-72689253 | Msa0423040:three_prime_UTR |
| GAGCAAAGGATGTGAACCAG+CGG | 0.690367 | 3_2:+72691459 | None:intergenic |
| GATGGAGAGATTGTGATGAG+AGG | 0.700166 | 3_2:+72691040 | None:intergenic |
| GTACTGGAAACAATTCATGG+AGG | 0.765506 | 3_2:+72689627 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATAAGATTATGATATGA+TGG | + | chr3_2:72689140-72689159 | None:intergenic | 15.0% |
| !!! | CAGTAAAATTATTGTTATTA+TGG | + | chr3_2:72689189-72689208 | None:intergenic | 15.0% |
| !!! | TAAGTTTATTAGTTTAATTG+TGG | - | chr3_2:72689287-72689306 | Msa0423040:three_prime_UTR | 15.0% |
| !!! | AAGTTTATTAGTTTAATTGT+GGG | - | chr3_2:72689288-72689307 | Msa0423040:three_prime_UTR | 15.0% |
| !! | TAAAATTAAAAGCAACAAAA+AGG | - | chr3_2:72691075-72691094 | Msa0423040:CDS | 15.0% |
| !! | ATTATAAGATTATGATATGA+TGG | + | chr3_2:72689140-72689159 | None:intergenic | 15.0% |
| !!! | CAGTAAAATTATTGTTATTA+TGG | + | chr3_2:72689189-72689208 | None:intergenic | 15.0% |
| !!! | TAAGTTTATTAGTTTAATTG+TGG | - | chr3_2:72689287-72689306 | Msa0423040:three_prime_UTR | 15.0% |
| !!! | AAGTTTATTAGTTTAATTGT+GGG | - | chr3_2:72689288-72689307 | Msa0423040:three_prime_UTR | 15.0% |
| !! | TAAAATTAAAAGCAACAAAA+AGG | - | chr3_2:72691075-72691094 | Msa0423040:CDS | 15.0% |
| !!! | ATTTTACTGTGTTAAAAAGA+AGG | - | chr3_2:72689200-72689219 | Msa0423040:three_prime_UTR | 20.0% |
| !!! | TTCTTCTTTCTTTCTATTTT+TGG | - | chr3_2:72689590-72689609 | Msa0423040:CDS | 20.0% |
| !! | AACGTAAAAGTAAAAAAACA+TGG | + | chr3_2:72689622-72689641 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTTACTTTTACGT+TGG | - | chr3_2:72689621-72689640 | Msa0423040:CDS | 20.0% |
| !!! | TAACTATAATTTAGTTTCTG+AGG | - | chr3_2:72690106-72690125 | Msa0423040:intron | 20.0% |
| !!! | TTTGTTGTATTTACAGATTA+AGG | - | chr3_2:72690597-72690616 | Msa0423040:CDS | 20.0% |
| !! | TCTACATCTTTGTAAAAAAA+TGG | - | chr3_2:72691170-72691189 | Msa0423040:five_prime_UTR | 20.0% |
| !! | TGATATGAATAATTACTATG+TGG | - | chr3_2:72691354-72691373 | Msa0423040:five_prime_UTR | 20.0% |
| !! | TTAAAAAAAAATGTACAGCA+TGG | + | chr3_2:72691393-72691412 | None:intergenic | 20.0% |
| !!! | ATTTTACTGTGTTAAAAAGA+AGG | - | chr3_2:72689200-72689219 | Msa0423040:three_prime_UTR | 20.0% |
| !!! | TTCTTCTTTCTTTCTATTTT+TGG | - | chr3_2:72689590-72689609 | Msa0423040:CDS | 20.0% |
| !! | AACGTAAAAGTAAAAAAACA+TGG | + | chr3_2:72689622-72689641 | None:intergenic | 20.0% |
| !!! | ATGTTTTTTTACTTTTACGT+TGG | - | chr3_2:72689621-72689640 | Msa0423040:CDS | 20.0% |
| !!! | TAACTATAATTTAGTTTCTG+AGG | - | chr3_2:72690106-72690125 | Msa0423040:intron | 20.0% |
| !!! | TTTGTTGTATTTACAGATTA+AGG | - | chr3_2:72690597-72690616 | Msa0423040:CDS | 20.0% |
| !! | TCTACATCTTTGTAAAAAAA+TGG | - | chr3_2:72691170-72691189 | Msa0423040:five_prime_UTR | 20.0% |
| !! | TGATATGAATAATTACTATG+TGG | - | chr3_2:72691354-72691373 | Msa0423040:five_prime_UTR | 20.0% |
| !! | TTAAAAAAAAATGTACAGCA+TGG | + | chr3_2:72691393-72691412 | None:intergenic | 20.0% |
| !! | TAAGATTATGATATGATGGA+GGG | + | chr3_2:72689136-72689155 | None:intergenic | 25.0% |
| ! | ATAAGATTATGATATGATGG+AGG | + | chr3_2:72689137-72689156 | None:intergenic | 25.0% |
| ! | ATCAAACAATTCATACACAT+AGG | + | chr3_2:72689320-72689339 | None:intergenic | 25.0% |
| ! | TATGTGTATGAATTGTTTGA+TGG | - | chr3_2:72689319-72689338 | Msa0423040:three_prime_UTR | 25.0% |
| ! | ATTCACTAACGTTGTTAATA+AGG | - | chr3_2:72689387-72689406 | Msa0423040:three_prime_UTR | 25.0% |
| ! | ATTAATGATTAACCTGTTGA+TGG | + | chr3_2:72689540-72689559 | None:intergenic | 25.0% |
| !!! | TTCTTTCTTTCTATTTTTGG+AGG | - | chr3_2:72689593-72689612 | Msa0423040:CDS | 25.0% |
| !!! | TCTTTCTTTCTATTTTTGGA+GGG | - | chr3_2:72689594-72689613 | Msa0423040:CDS | 25.0% |
| !!! | CTTTTTTTGCATTGATTTAG+AGG | - | chr3_2:72689678-72689697 | Msa0423040:CDS | 25.0% |
| ! | TTATAGTTAAGTTACTACTG+TGG | + | chr3_2:72690095-72690114 | None:intergenic | 25.0% |
| !!! | TGTGTTATTTAGTGTATGTT+TGG | - | chr3_2:72690381-72690400 | Msa0423040:intron | 25.0% |
| ! | TATTTAGTGTATGTTTGGAT+TGG | - | chr3_2:72690386-72690405 | Msa0423040:intron | 25.0% |
| ! | TGAATTTAGCAAAATCACTT+TGG | - | chr3_2:72690412-72690431 | Msa0423040:intron | 25.0% |
| ! | GATCTTAGTTATGAAATTGT+AGG | - | chr3_2:72690476-72690495 | Msa0423040:intron | 25.0% |
| !!! | AAAAAGCACAATCAATGTTT+TGG | - | chr3_2:72690648-72690667 | Msa0423040:CDS | 25.0% |
| ! | ATAATCAACAACAATGATGT+TGG | - | chr3_2:72690781-72690800 | Msa0423040:CDS | 25.0% |
| ! | TAAAAGCAACAAAAAGGTTA+AGG | - | chr3_2:72691081-72691100 | Msa0423040:exon | 25.0% |
| ! | AAAAGCAACAAAAAGGTTAA+GGG | - | chr3_2:72691082-72691101 | Msa0423040:exon | 25.0% |
| !! | TTTTAATCTTTGGACATCAA+AGG | - | chr3_2:72691213-72691232 | Msa0423040:five_prime_UTR | 25.0% |
| !! | TAAGATTATGATATGATGGA+GGG | + | chr3_2:72689136-72689155 | None:intergenic | 25.0% |
| ! | ATAAGATTATGATATGATGG+AGG | + | chr3_2:72689137-72689156 | None:intergenic | 25.0% |
| ! | ATCAAACAATTCATACACAT+AGG | + | chr3_2:72689320-72689339 | None:intergenic | 25.0% |
| ! | TATGTGTATGAATTGTTTGA+TGG | - | chr3_2:72689319-72689338 | Msa0423040:three_prime_UTR | 25.0% |
| ! | ATTCACTAACGTTGTTAATA+AGG | - | chr3_2:72689387-72689406 | Msa0423040:three_prime_UTR | 25.0% |
| ! | ATTAATGATTAACCTGTTGA+TGG | + | chr3_2:72689540-72689559 | None:intergenic | 25.0% |
| !!! | TTCTTTCTTTCTATTTTTGG+AGG | - | chr3_2:72689593-72689612 | Msa0423040:CDS | 25.0% |
| !!! | TCTTTCTTTCTATTTTTGGA+GGG | - | chr3_2:72689594-72689613 | Msa0423040:CDS | 25.0% |
| !!! | CTTTTTTTGCATTGATTTAG+AGG | - | chr3_2:72689678-72689697 | Msa0423040:CDS | 25.0% |
| ! | TTATAGTTAAGTTACTACTG+TGG | + | chr3_2:72690095-72690114 | None:intergenic | 25.0% |
| !!! | TGTGTTATTTAGTGTATGTT+TGG | - | chr3_2:72690381-72690400 | Msa0423040:intron | 25.0% |
| ! | TATTTAGTGTATGTTTGGAT+TGG | - | chr3_2:72690386-72690405 | Msa0423040:intron | 25.0% |
| ! | TGAATTTAGCAAAATCACTT+TGG | - | chr3_2:72690412-72690431 | Msa0423040:intron | 25.0% |
| ! | GATCTTAGTTATGAAATTGT+AGG | - | chr3_2:72690476-72690495 | Msa0423040:intron | 25.0% |
| !!! | AAAAAGCACAATCAATGTTT+TGG | - | chr3_2:72690648-72690667 | Msa0423040:CDS | 25.0% |
| ! | ATAATCAACAACAATGATGT+TGG | - | chr3_2:72690781-72690800 | Msa0423040:CDS | 25.0% |
| ! | TAAAAGCAACAAAAAGGTTA+AGG | - | chr3_2:72691081-72691100 | Msa0423040:exon | 25.0% |
| ! | AAAAGCAACAAAAAGGTTAA+GGG | - | chr3_2:72691082-72691101 | Msa0423040:exon | 25.0% |
| !! | TTTTAATCTTTGGACATCAA+AGG | - | chr3_2:72691213-72691232 | Msa0423040:five_prime_UTR | 25.0% |
| ! | AATTGTTTGATGGATGAAGT+AGG | - | chr3_2:72689329-72689348 | Msa0423040:three_prime_UTR | 30.0% |
| TTTCAATCAATGATGTTGGA+TGG | - | chr3_2:72689739-72689758 | Msa0423040:CDS | 30.0% | |
| !! | GGCAAGTATTTAACTTTTCT+AGG | - | chr3_2:72690497-72690516 | Msa0423040:intron | 30.0% |
| AAGGAATTGAAATCAAAGCT+TGG | - | chr3_2:72690616-72690635 | Msa0423040:CDS | 30.0% | |
| ! | GAATTGATGTTTCTGAAGAT+GGG | + | chr3_2:72690723-72690742 | None:intergenic | 30.0% |
| TTCAGAATCCAAAGATCAAT+TGG | - | chr3_2:72690747-72690766 | Msa0423040:CDS | 30.0% | |
| GTCATAATCCAATTGATCTT+TGG | + | chr3_2:72690758-72690777 | None:intergenic | 30.0% | |
| AACAACAATGATGTTGGTAT+TGG | - | chr3_2:72690787-72690806 | Msa0423040:CDS | 30.0% | |
| TCTTCACATGATAAGATTTC+TGG | + | chr3_2:72690957-72690976 | None:intergenic | 30.0% | |
| GAAATCTTATCATGTGAAGA+TGG | - | chr3_2:72690957-72690976 | Msa0423040:intron | 30.0% | |
| !!! | GCTTTTAATTTTAACTCCAC+TGG | + | chr3_2:72691068-72691087 | None:intergenic | 30.0% |
| TTTCTTAAAGAGATGTTGCA+AGG | - | chr3_2:72691126-72691145 | Msa0423040:five_prime_UTR | 30.0% | |
| CATCTTTGTAAAAAAATGGC+TGG | - | chr3_2:72691174-72691193 | Msa0423040:five_prime_UTR | 30.0% | |
| ! | TTGTAAAAAAATGGCTGGTT+TGG | - | chr3_2:72691179-72691198 | Msa0423040:five_prime_UTR | 30.0% |
| !!! | TGCTTTGTGGTTTTAATCTT+TGG | - | chr3_2:72691203-72691222 | Msa0423040:five_prime_UTR | 30.0% |
| ATGTGAAGAAAAGAACAGAA+GGG | - | chr3_2:72691264-72691283 | Msa0423040:five_prime_UTR | 30.0% | |
| ! | AATTGTTTGATGGATGAAGT+AGG | - | chr3_2:72689329-72689348 | Msa0423040:three_prime_UTR | 30.0% |
| TTTCAATCAATGATGTTGGA+TGG | - | chr3_2:72689739-72689758 | Msa0423040:CDS | 30.0% | |
| !! | GGCAAGTATTTAACTTTTCT+AGG | - | chr3_2:72690497-72690516 | Msa0423040:intron | 30.0% |
| AAGGAATTGAAATCAAAGCT+TGG | - | chr3_2:72690616-72690635 | Msa0423040:CDS | 30.0% | |
| ! | GAATTGATGTTTCTGAAGAT+GGG | + | chr3_2:72690723-72690742 | None:intergenic | 30.0% |
| TTCAGAATCCAAAGATCAAT+TGG | - | chr3_2:72690747-72690766 | Msa0423040:CDS | 30.0% | |
| GTCATAATCCAATTGATCTT+TGG | + | chr3_2:72690758-72690777 | None:intergenic | 30.0% | |
| AACAACAATGATGTTGGTAT+TGG | - | chr3_2:72690787-72690806 | Msa0423040:CDS | 30.0% | |
| TCTTCACATGATAAGATTTC+TGG | + | chr3_2:72690957-72690976 | None:intergenic | 30.0% | |
| GAAATCTTATCATGTGAAGA+TGG | - | chr3_2:72690957-72690976 | Msa0423040:intron | 30.0% | |
| !!! | GCTTTTAATTTTAACTCCAC+TGG | + | chr3_2:72691068-72691087 | None:intergenic | 30.0% |
| TTTCTTAAAGAGATGTTGCA+AGG | - | chr3_2:72691126-72691145 | Msa0423040:five_prime_UTR | 30.0% | |
| CATCTTTGTAAAAAAATGGC+TGG | - | chr3_2:72691174-72691193 | Msa0423040:five_prime_UTR | 30.0% | |
| ! | TTGTAAAAAAATGGCTGGTT+TGG | - | chr3_2:72691179-72691198 | Msa0423040:five_prime_UTR | 30.0% |
| !!! | TGCTTTGTGGTTTTAATCTT+TGG | - | chr3_2:72691203-72691222 | Msa0423040:five_prime_UTR | 30.0% |
| ATGTGAAGAAAAGAACAGAA+GGG | - | chr3_2:72691264-72691283 | Msa0423040:five_prime_UTR | 30.0% | |
| GTCTCTTCATGAGTGAAAAT+AGG | + | chr3_2:72689473-72689492 | None:intergenic | 35.0% | |
| ATTTAGAGGAACATAGTCCA+AGG | - | chr3_2:72689692-72689711 | Msa0423040:CDS | 35.0% | |
| GAACAAACATGTGTATGGTA+TGG | - | chr3_2:72689714-72689733 | Msa0423040:CDS | 35.0% | |
| GGAGTTTCAATCAATGATGT+TGG | - | chr3_2:72689735-72689754 | Msa0423040:CDS | 35.0% | |
| ! | TTGGATGGATTTGAAGAAGA+AGG | - | chr3_2:72689754-72689773 | Msa0423040:CDS | 35.0% |
| ! | TGGATGGATTTGAAGAAGAA+GGG | - | chr3_2:72689755-72689774 | Msa0423040:CDS | 35.0% |
| ACTAAGAGTGGATCAAGTTA+AGG | - | chr3_2:72689819-72689838 | Msa0423040:CDS | 35.0% | |
| AAAACAAGCTTGAACCTGAA+AGG | - | chr3_2:72689866-72689885 | Msa0423040:CDS | 35.0% | |
| AAGCAGTTGGAAAGAGATTA+TGG | - | chr3_2:72689973-72689992 | Msa0423040:intron | 35.0% | |
| ! | AGACAACAAAGCTTTTCACA+AGG | - | chr3_2:72690050-72690069 | Msa0423040:intron | 35.0% |
| AGATCAAGTACTTTCACAAG+AGG | + | chr3_2:72690461-72690480 | None:intergenic | 35.0% | |
| !!! | CACAATCAATGTTTTGGTGA+AGG | - | chr3_2:72690654-72690673 | Msa0423040:CDS | 35.0% |
| !!! | AATCAATGTTTTGGTGAAGG+AGG | - | chr3_2:72690657-72690676 | Msa0423040:CDS | 35.0% |
| TTCATCACAAGATTCAAGCA+TGG | + | chr3_2:72690689-72690708 | None:intergenic | 35.0% | |
| ! | GGAATTGATGTTTCTGAAGA+TGG | + | chr3_2:72690724-72690743 | None:intergenic | 35.0% |
| TGATCTTTGGATTCTGAACT+AGG | + | chr3_2:72690745-72690764 | None:intergenic | 35.0% | |
| TTTCCAGTAGACTTGAAAGA+CGG | - | chr3_2:72690826-72690845 | Msa0423040:CDS | 35.0% | |
| AAGATTCAGGAGACAACAAA+AGG | + | chr3_2:72690912-72690931 | None:intergenic | 35.0% | |
| !! | CATGATAAGATTTCTGGTAC+TGG | + | chr3_2:72690951-72690970 | None:intergenic | 35.0% |
| ATCTTATCATGTGAAGATGG+AGG | - | chr3_2:72690960-72690979 | Msa0423040:intron | 35.0% | |
| !!! | TAATTTTAACTCCACTGGTC+AGG | + | chr3_2:72691063-72691082 | None:intergenic | 35.0% |
| ! | AGAGATGTTGCAAGGTTTTA+TGG | - | chr3_2:72691134-72691153 | Msa0423040:five_prime_UTR | 35.0% |
| CATCAAAGGTAGCAAAACTA+TGG | - | chr3_2:72691227-72691246 | Msa0423040:five_prime_UTR | 35.0% | |
| CATGTGAAGAAAAGAACAGA+AGG | - | chr3_2:72691263-72691282 | Msa0423040:five_prime_UTR | 35.0% | |
| AAGAAAAGAACAGAAGGGTT+GGG | - | chr3_2:72691269-72691288 | Msa0423040:five_prime_UTR | 35.0% | |
| ! | TTGGGGATTAAGGTTGATTA+TGG | - | chr3_2:72691323-72691342 | Msa0423040:five_prime_UTR | 35.0% |
| ! | ATTAAGGTTGATTATGGCTC+TGG | - | chr3_2:72691329-72691348 | Msa0423040:five_prime_UTR | 35.0% |
| GTCTCTTCATGAGTGAAAAT+AGG | + | chr3_2:72689473-72689492 | None:intergenic | 35.0% | |
| ATTTAGAGGAACATAGTCCA+AGG | - | chr3_2:72689692-72689711 | Msa0423040:CDS | 35.0% | |
| GAACAAACATGTGTATGGTA+TGG | - | chr3_2:72689714-72689733 | Msa0423040:CDS | 35.0% | |
| GGAGTTTCAATCAATGATGT+TGG | - | chr3_2:72689735-72689754 | Msa0423040:CDS | 35.0% | |
| ! | TTGGATGGATTTGAAGAAGA+AGG | - | chr3_2:72689754-72689773 | Msa0423040:CDS | 35.0% |
| ! | TGGATGGATTTGAAGAAGAA+GGG | - | chr3_2:72689755-72689774 | Msa0423040:CDS | 35.0% |
| ACTAAGAGTGGATCAAGTTA+AGG | - | chr3_2:72689819-72689838 | Msa0423040:CDS | 35.0% | |
| AAAACAAGCTTGAACCTGAA+AGG | - | chr3_2:72689866-72689885 | Msa0423040:CDS | 35.0% | |
| AAGCAGTTGGAAAGAGATTA+TGG | - | chr3_2:72689973-72689992 | Msa0423040:intron | 35.0% | |
| ! | AGACAACAAAGCTTTTCACA+AGG | - | chr3_2:72690050-72690069 | Msa0423040:intron | 35.0% |
| AGATCAAGTACTTTCACAAG+AGG | + | chr3_2:72690461-72690480 | None:intergenic | 35.0% | |
| !!! | CACAATCAATGTTTTGGTGA+AGG | - | chr3_2:72690654-72690673 | Msa0423040:CDS | 35.0% |
| !!! | AATCAATGTTTTGGTGAAGG+AGG | - | chr3_2:72690657-72690676 | Msa0423040:CDS | 35.0% |
| TTCATCACAAGATTCAAGCA+TGG | + | chr3_2:72690689-72690708 | None:intergenic | 35.0% | |
| ! | GGAATTGATGTTTCTGAAGA+TGG | + | chr3_2:72690724-72690743 | None:intergenic | 35.0% |
| TGATCTTTGGATTCTGAACT+AGG | + | chr3_2:72690745-72690764 | None:intergenic | 35.0% | |
| TTTCCAGTAGACTTGAAAGA+CGG | - | chr3_2:72690826-72690845 | Msa0423040:CDS | 35.0% | |
| AAGATTCAGGAGACAACAAA+AGG | + | chr3_2:72690912-72690931 | None:intergenic | 35.0% | |
| !! | CATGATAAGATTTCTGGTAC+TGG | + | chr3_2:72690951-72690970 | None:intergenic | 35.0% |
| ATCTTATCATGTGAAGATGG+AGG | - | chr3_2:72690960-72690979 | Msa0423040:intron | 35.0% | |
| !!! | TAATTTTAACTCCACTGGTC+AGG | + | chr3_2:72691063-72691082 | None:intergenic | 35.0% |
| ! | AGAGATGTTGCAAGGTTTTA+TGG | - | chr3_2:72691134-72691153 | Msa0423040:five_prime_UTR | 35.0% |
| CATCAAAGGTAGCAAAACTA+TGG | - | chr3_2:72691227-72691246 | Msa0423040:five_prime_UTR | 35.0% | |
| CATGTGAAGAAAAGAACAGA+AGG | - | chr3_2:72691263-72691282 | Msa0423040:five_prime_UTR | 35.0% | |
| AAGAAAAGAACAGAAGGGTT+GGG | - | chr3_2:72691269-72691288 | Msa0423040:five_prime_UTR | 35.0% | |
| ! | TTGGGGATTAAGGTTGATTA+TGG | - | chr3_2:72691323-72691342 | Msa0423040:five_prime_UTR | 35.0% |
| ! | ATTAAGGTTGATTATGGCTC+TGG | - | chr3_2:72691329-72691348 | Msa0423040:five_prime_UTR | 35.0% |
| AGGGAGATTGATTAGAGCAA+AGG | + | chr3_2:72689117-72689136 | None:intergenic | 40.0% | |
| ! | GAAGAAGAATCTGAGGTGTT+GGG | + | chr3_2:72689495-72689514 | None:intergenic | 40.0% |
| ! | TGAAGAAGAATCTGAGGTGT+TGG | + | chr3_2:72689496-72689515 | None:intergenic | 40.0% |
| AGGAGTTGAAGAAGAATCTG+AGG | + | chr3_2:72689502-72689521 | None:intergenic | 40.0% | |
| ATCACAATCTCTCCATCAAC+AGG | - | chr3_2:72689525-72689544 | Msa0423040:CDS | 40.0% | |
| CCATACACATGTTTGTTCCT+TGG | + | chr3_2:72689712-72689731 | None:intergenic | 40.0% | |
| CCAAGGAACAAACATGTGTA+TGG | - | chr3_2:72689709-72689728 | Msa0423040:CDS | 40.0% | |
| GAAGAAACGTAGACTAAGAG+TGG | - | chr3_2:72689807-72689826 | Msa0423040:CDS | 40.0% | |
| AGTGGATCAAGTTAAGGCTT+TGG | - | chr3_2:72689825-72689844 | Msa0423040:CDS | 40.0% | |
| !! | GGCTTTGGAGAAAAACTTTG+AGG | - | chr3_2:72689840-72689859 | Msa0423040:CDS | 40.0% |
| AACCAAACAGCTACTTGTCT+AGG | + | chr3_2:72689925-72689944 | None:intergenic | 40.0% | |
| ! | TAGCTGTTTGGTTCCAAAAC+AGG | - | chr3_2:72689932-72689951 | Msa0423040:CDS | 40.0% |
| AAGATGGAAGACTAAGCAGT+TGG | - | chr3_2:72689960-72689979 | Msa0423040:intron | 40.0% | |
| ! | CAACAAAGCTTTTCACAAGG+AGG | - | chr3_2:72690053-72690072 | Msa0423040:intron | 40.0% |
| AGACTTGAAAGACGGTTCTT+CGG | - | chr3_2:72690834-72690853 | Msa0423040:CDS | 40.0% | |
| CAATTCATGGAGGAAGATTC+AGG | + | chr3_2:72690925-72690944 | None:intergenic | 40.0% | |
| GTACTGGAAACAATTCATGG+AGG | + | chr3_2:72690935-72690954 | None:intergenic | 40.0% | |
| ! | CTGGTACTGGAAACAATTCA+TGG | + | chr3_2:72690938-72690957 | None:intergenic | 40.0% |
| !! | CAATTTCTTAAGTGCCGATG+AGG | - | chr3_2:72690987-72691006 | Msa0423040:intron | 40.0% |
| GAAGAAAAGAACAGAAGGGT+TGG | - | chr3_2:72691268-72691287 | Msa0423040:five_prime_UTR | 40.0% | |
| AGAAAAGAACAGAAGGGTTG+GGG | - | chr3_2:72691270-72691289 | Msa0423040:five_prime_UTR | 40.0% | |
| AGGGAGATTGATTAGAGCAA+AGG | + | chr3_2:72689117-72689136 | None:intergenic | 40.0% | |
| ! | GAAGAAGAATCTGAGGTGTT+GGG | + | chr3_2:72689495-72689514 | None:intergenic | 40.0% |
| ! | TGAAGAAGAATCTGAGGTGT+TGG | + | chr3_2:72689496-72689515 | None:intergenic | 40.0% |
| AGGAGTTGAAGAAGAATCTG+AGG | + | chr3_2:72689502-72689521 | None:intergenic | 40.0% | |
| ATCACAATCTCTCCATCAAC+AGG | - | chr3_2:72689525-72689544 | Msa0423040:CDS | 40.0% | |
| CCATACACATGTTTGTTCCT+TGG | + | chr3_2:72689712-72689731 | None:intergenic | 40.0% | |
| CCAAGGAACAAACATGTGTA+TGG | - | chr3_2:72689709-72689728 | Msa0423040:CDS | 40.0% | |
| GAAGAAACGTAGACTAAGAG+TGG | - | chr3_2:72689807-72689826 | Msa0423040:CDS | 40.0% | |
| AGTGGATCAAGTTAAGGCTT+TGG | - | chr3_2:72689825-72689844 | Msa0423040:CDS | 40.0% | |
| !! | GGCTTTGGAGAAAAACTTTG+AGG | - | chr3_2:72689840-72689859 | Msa0423040:CDS | 40.0% |
| AACCAAACAGCTACTTGTCT+AGG | + | chr3_2:72689925-72689944 | None:intergenic | 40.0% | |
| ! | TAGCTGTTTGGTTCCAAAAC+AGG | - | chr3_2:72689932-72689951 | Msa0423040:CDS | 40.0% |
| AAGATGGAAGACTAAGCAGT+TGG | - | chr3_2:72689960-72689979 | Msa0423040:intron | 40.0% | |
| ! | CAACAAAGCTTTTCACAAGG+AGG | - | chr3_2:72690053-72690072 | Msa0423040:intron | 40.0% |
| AGACTTGAAAGACGGTTCTT+CGG | - | chr3_2:72690834-72690853 | Msa0423040:CDS | 40.0% | |
| CAATTCATGGAGGAAGATTC+AGG | + | chr3_2:72690925-72690944 | None:intergenic | 40.0% | |
| GTACTGGAAACAATTCATGG+AGG | + | chr3_2:72690935-72690954 | None:intergenic | 40.0% | |
| ! | CTGGTACTGGAAACAATTCA+TGG | + | chr3_2:72690938-72690957 | None:intergenic | 40.0% |
| !! | CAATTTCTTAAGTGCCGATG+AGG | - | chr3_2:72690987-72691006 | Msa0423040:intron | 40.0% |
| GAAGAAAAGAACAGAAGGGT+TGG | - | chr3_2:72691268-72691287 | Msa0423040:five_prime_UTR | 40.0% | |
| AGAAAAGAACAGAAGGGTTG+GGG | - | chr3_2:72691270-72691289 | Msa0423040:five_prime_UTR | 40.0% | |
| GATGGAGAGATTGTGATGAG+AGG | + | chr3_2:72689522-72689541 | None:intergenic | 45.0% | |
| ! | GAAGGGTGTGTTGAAGAAAC+TGG | - | chr3_2:72689772-72689791 | Msa0423040:CDS | 45.0% |
| GCAAGCTTCTCTTTCCTTTC+AGG | + | chr3_2:72689883-72689902 | None:intergenic | 45.0% | |
| GAGAAGCTTGCCATTGAACT+TGG | - | chr3_2:72689892-72689911 | Msa0423040:CDS | 45.0% | |
| AGGCTGCAATCCAAGTTCAA+TGG | + | chr3_2:72689905-72689924 | None:intergenic | 45.0% | |
| AGCCTAGACAAGTAGCTGTT+TGG | - | chr3_2:72689920-72689939 | Msa0423040:CDS | 45.0% | |
| TCCAAAACAGGAGAGCAAGA+TGG | - | chr3_2:72689944-72689963 | Msa0423040:CDS | 45.0% | |
| ! | TCCATCTTGCTCTCCTGTTT+TGG | + | chr3_2:72689948-72689967 | None:intergenic | 45.0% |
| ! | GAACCGTCTTTCAAGTCTAC+TGG | + | chr3_2:72690832-72690851 | None:intergenic | 45.0% |
| TCCAGCGCAATTTCTTCATC+CGG | - | chr3_2:72690865-72690884 | Msa0423040:intron | 45.0% | |
| GAAAAAGTTGCACGCCTCAT+CGG | + | chr3_2:72691004-72691023 | None:intergenic | 45.0% | |
| !! | TGAGGCGTGCAACTTTTTCT+CGG | - | chr3_2:72691005-72691024 | Msa0423040:intron | 45.0% |
| GTCAGGACAGTACCATTGTA+GGG | + | chr3_2:72691046-72691065 | None:intergenic | 45.0% | |
| ! | GAAGGATGGTTTGGGGATTA+AGG | - | chr3_2:72691313-72691332 | Msa0423040:five_prime_UTR | 45.0% |
| GATGGAGAGATTGTGATGAG+AGG | + | chr3_2:72689522-72689541 | None:intergenic | 45.0% | |
| ! | GAAGGGTGTGTTGAAGAAAC+TGG | - | chr3_2:72689772-72689791 | Msa0423040:CDS | 45.0% |
| GCAAGCTTCTCTTTCCTTTC+AGG | + | chr3_2:72689883-72689902 | None:intergenic | 45.0% | |
| GAGAAGCTTGCCATTGAACT+TGG | - | chr3_2:72689892-72689911 | Msa0423040:CDS | 45.0% | |
| AGGCTGCAATCCAAGTTCAA+TGG | + | chr3_2:72689905-72689924 | None:intergenic | 45.0% | |
| AGCCTAGACAAGTAGCTGTT+TGG | - | chr3_2:72689920-72689939 | Msa0423040:CDS | 45.0% | |
| TCCAAAACAGGAGAGCAAGA+TGG | - | chr3_2:72689944-72689963 | Msa0423040:CDS | 45.0% | |
| ! | TCCATCTTGCTCTCCTGTTT+TGG | + | chr3_2:72689948-72689967 | None:intergenic | 45.0% |
| ! | GAACCGTCTTTCAAGTCTAC+TGG | + | chr3_2:72690832-72690851 | None:intergenic | 45.0% |
| TCCAGCGCAATTTCTTCATC+CGG | - | chr3_2:72690865-72690884 | Msa0423040:intron | 45.0% | |
| GAAAAAGTTGCACGCCTCAT+CGG | + | chr3_2:72691004-72691023 | None:intergenic | 45.0% | |
| !! | TGAGGCGTGCAACTTTTTCT+CGG | - | chr3_2:72691005-72691024 | Msa0423040:intron | 45.0% |
| GTCAGGACAGTACCATTGTA+GGG | + | chr3_2:72691046-72691065 | None:intergenic | 45.0% | |
| ! | GAAGGATGGTTTGGGGATTA+AGG | - | chr3_2:72691313-72691332 | Msa0423040:five_prime_UTR | 45.0% |
| CCAGCGCAATTTCTTCATCC+GGG | - | chr3_2:72690866-72690885 | Msa0423040:intron | 50.0% | |
| CAGCGCAATTTCTTCATCCG+GGG | - | chr3_2:72690867-72690886 | Msa0423040:intron | 50.0% | |
| AGCAAGCACCAACCCTACAA+TGG | - | chr3_2:72691031-72691050 | Msa0423040:intron | 50.0% | |
| GGACAGTACCATTGTAGGGT+TGG | + | chr3_2:72691042-72691061 | None:intergenic | 50.0% | |
| GGTCAGGACAGTACCATTGT+AGG | + | chr3_2:72691047-72691066 | None:intergenic | 50.0% | |
| AATGGTACTGTCCTGACCAG+TGG | - | chr3_2:72691049-72691068 | Msa0423040:CDS | 50.0% | |
| !! | TGGCTGGTTTGGTTGCTTTG+TGG | - | chr3_2:72691190-72691209 | Msa0423040:five_prime_UTR | 50.0% |
| AAGAACAGAAGGGTTGGGGA+AGG | - | chr3_2:72691274-72691293 | Msa0423040:five_prime_UTR | 50.0% | |
| TGGCAGCTAGAAGGATGGTT+TGG | - | chr3_2:72691304-72691323 | Msa0423040:five_prime_UTR | 50.0% | |
| GGCAGCTAGAAGGATGGTTT+GGG | - | chr3_2:72691305-72691324 | Msa0423040:five_prime_UTR | 50.0% | |
| GCAGCTAGAAGGATGGTTTG+GGG | - | chr3_2:72691306-72691325 | Msa0423040:five_prime_UTR | 50.0% | |
| CCAGCGCAATTTCTTCATCC+GGG | - | chr3_2:72690866-72690885 | Msa0423040:intron | 50.0% | |
| CAGCGCAATTTCTTCATCCG+GGG | - | chr3_2:72690867-72690886 | Msa0423040:intron | 50.0% | |
| AGCAAGCACCAACCCTACAA+TGG | - | chr3_2:72691031-72691050 | Msa0423040:intron | 50.0% | |
| GGACAGTACCATTGTAGGGT+TGG | + | chr3_2:72691042-72691061 | None:intergenic | 50.0% | |
| GGTCAGGACAGTACCATTGT+AGG | + | chr3_2:72691047-72691066 | None:intergenic | 50.0% | |
| AATGGTACTGTCCTGACCAG+TGG | - | chr3_2:72691049-72691068 | Msa0423040:CDS | 50.0% | |
| !! | TGGCTGGTTTGGTTGCTTTG+TGG | - | chr3_2:72691190-72691209 | Msa0423040:five_prime_UTR | 50.0% |
| AAGAACAGAAGGGTTGGGGA+AGG | - | chr3_2:72691274-72691293 | Msa0423040:five_prime_UTR | 50.0% | |
| TGGCAGCTAGAAGGATGGTT+TGG | - | chr3_2:72691304-72691323 | Msa0423040:five_prime_UTR | 50.0% | |
| GGCAGCTAGAAGGATGGTTT+GGG | - | chr3_2:72691305-72691324 | Msa0423040:five_prime_UTR | 50.0% | |
| GCAGCTAGAAGGATGGTTTG+GGG | - | chr3_2:72691306-72691325 | Msa0423040:five_prime_UTR | 50.0% | |
| CCCGGATGAAGAAATTGCGC+TGG | + | chr3_2:72690869-72690888 | None:intergenic | 55.0% | |
| !! | CTGCTGACTCTGAAGAACCC+CGG | + | chr3_2:72690887-72690906 | None:intergenic | 55.0% |
| GCTTGTGGCAGCTAGAAGGA+TGG | - | chr3_2:72691299-72691318 | Msa0423040:five_prime_UTR | 55.0% | |
| CCCGGATGAAGAAATTGCGC+TGG | + | chr3_2:72690869-72690888 | None:intergenic | 55.0% | |
| !! | CTGCTGACTCTGAAGAACCC+CGG | + | chr3_2:72690887-72690906 | None:intergenic | 55.0% |
| GCTTGTGGCAGCTAGAAGGA+TGG | - | chr3_2:72691299-72691318 | Msa0423040:five_prime_UTR | 55.0% | |
| GGCTGCTTGTGGCAGCTAGA+AGG | - | chr3_2:72691295-72691314 | Msa0423040:five_prime_UTR | 60.0% | |
| GGCTGCTTGTGGCAGCTAGA+AGG | - | chr3_2:72691295-72691314 | Msa0423040:five_prime_UTR | 60.0% | |
| GGGTTGGGGAAGGCTGCTTG+TGG | - | chr3_2:72691284-72691303 | Msa0423040:five_prime_UTR | 65.0% | |
| GGGTTGGGGAAGGCTGCTTG+TGG | - | chr3_2:72691284-72691303 | Msa0423040:five_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 72689102 | 72691479 | 72689102 | ID=Msa0423040;Name=Msa0423040 |
| chr3_2 | mRNA | 72689102 | 72691479 | 72689102 | ID=Msa0423040-mRNA-1;Parent=Msa0423040;Name=Msa0423040-mRNA-1;_AED=0.01;_eAED=0.01;_QI=381|1|1|1|1|1|3|402|301 |
| chr3_2 | exon | 72689102 | 72689968 | 72689102 | ID=Msa0423040-mRNA-1:exon:18034;Parent=Msa0423040-mRNA-1 |
| chr3_2 | exon | 72690507 | 72690883 | 72690507 | ID=Msa0423040-mRNA-1:exon:18033;Parent=Msa0423040-mRNA-1 |
| chr3_2 | exon | 72691035 | 72691479 | 72691035 | ID=Msa0423040-mRNA-1:exon:18032;Parent=Msa0423040-mRNA-1 |
| chr3_2 | five_prime_UTR | 72691099 | 72691479 | 72691099 | ID=Msa0423040-mRNA-1:five_prime_utr;Parent=Msa0423040-mRNA-1 |
| chr3_2 | CDS | 72691035 | 72691098 | 72691035 | ID=Msa0423040-mRNA-1:cds;Parent=Msa0423040-mRNA-1 |
| chr3_2 | CDS | 72690507 | 72690883 | 72690507 | ID=Msa0423040-mRNA-1:cds;Parent=Msa0423040-mRNA-1 |
| chr3_2 | CDS | 72689504 | 72689968 | 72689504 | ID=Msa0423040-mRNA-1:cds;Parent=Msa0423040-mRNA-1 |
| chr3_2 | three_prime_UTR | 72689102 | 72689503 | 72689102 | ID=Msa0423040-mRNA-1:three_prime_utr;Parent=Msa0423040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
