AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0505360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0505360 MtrunA17_Chr3g0106231 88.075 478 53 2 1 477 1 475 0.0 874
Msa0505360 MtrunA17_Chr3g0106251 95.584 317 10 1 161 477 5 317 0.0 623
Msa0505360 MtrunA17_Chr5g0431441 54.902 459 175 8 18 454 18 466 3.13e-177 505
Msa0505360 MtrunA17_Chr5g0431361 50.655 458 194 11 15 453 9 453 2.65e-149 433
Msa0505360 MtrunA17_Chr5g0431421 48.552 449 212 7 16 453 8 448 1.86e-143 418
Msa0505360 MtrunA17_Chr5g0431401 48.107 449 214 7 16 453 8 448 1.80e-142 416
Msa0505360 MtrunA17_Chr5g0431371 47.661 449 216 7 16 453 8 448 6.87e-142 414
Msa0505360 MtrunA17_Chr5g0431431 48.049 410 134 9 9 407 2 343 2.41e-117 348
Msa0505360 MtrunA17_Chr5g0432731 55.705 298 125 3 161 454 3 297 4.31e-113 335
Msa0505360 MtrunA17_Chr3g0106241 82.915 199 23 3 1 199 1 188 4.67e-110 323
Msa0505360 MtrunA17_Chr6g0464861 32.473 465 285 13 9 455 2 455 9.53e-61 205
Msa0505360 MtrunA17_Chr6g0464881 32.385 457 277 13 18 454 11 455 5.98e-60 203
Msa0505360 MtrunA17_Chr6g0464871 31.522 460 283 14 16 455 21 468 3.56e-59 201
Msa0505360 MtrunA17_Chr6g0464841 31.087 460 285 13 16 455 9 456 4.15e-59 201
Msa0505360 MtrunA17_Chr6g0464921 31.868 455 281 14 18 453 11 455 7.97e-59 200
Msa0505360 MtrunA17_Chr7g0250001 32.599 454 278 13 18 454 6 448 1.13e-58 200
Msa0505360 MtrunA17_Chr8g0377921 29.046 482 281 13 16 454 1 464 1.25e-58 200
Msa0505360 MtrunA17_Chr8g0380531 31.887 461 282 14 18 456 10 460 1.20e-54 189
Msa0505360 MtrunA17_Chr5g0414321 30.044 456 290 13 18 456 11 454 3.78e-54 188
Msa0505360 MtrunA17_Chr6g0454341 30.579 484 274 17 18 454 10 478 4.72e-54 188
Msa0505360 MtrunA17_Chr8g0377941 29.668 482 296 14 16 464 1 472 1.01e-53 187
Msa0505360 MtrunA17_Chr5g0414331 28.791 455 301 11 18 458 13 458 1.72e-53 186
Msa0505360 MtrunA17_Chr7g0249981 31.250 480 284 17 18 471 25 484 1.36e-52 184
Msa0505360 MtrunA17_Chr3g0078841 28.926 484 288 15 15 454 7 478 2.59e-52 184
Msa0505360 MtrunA17_Chr3g0121991 29.545 484 295 15 10 453 68 545 5.67e-52 184
Msa0505360 MtrunA17_Chr3g0122001 29.598 473 291 13 18 453 6 473 5.89e-52 189
Msa0505360 MtrunA17_Chr3g0122001 29.448 489 299 14 5 453 470 952 6.03e-50 183
Msa0505360 MtrunA17_Chr5g0426431 28.689 488 286 14 13 454 7 478 1.18e-51 182
Msa0505360 MtrunA17_Chr4g0053501 29.106 481 271 15 18 454 11 465 1.92e-51 182
Msa0505360 MtrunA17_Chr8g0336331 28.542 480 290 14 17 454 9 477 2.04e-51 181
Msa0505360 MtrunA17_Chr3g0092641 28.893 488 285 15 13 454 7 478 2.04e-51 181
Msa0505360 MtrunA17_Chr3g0118671 30.498 482 277 19 18 454 6 474 3.72e-51 180
Msa0505360 MtrunA17_Chr6g0454141 28.571 483 287 16 18 454 10 480 6.96e-50 177
Msa0505360 MtrunA17_Chr6g0454151 27.310 487 286 14 18 454 10 478 1.18e-49 176
Msa0505360 MtrunA17_Chr5g0401721 28.274 481 286 16 19 456 9 473 1.63e-49 176
Msa0505360 MtrunA17_Chr6g0454191 27.950 483 291 14 18 454 10 481 1.86e-49 176
Msa0505360 MtrunA17_Chr6g0454331 27.778 486 289 15 18 454 7 479 7.00e-49 174
Msa0505360 MtrunA17_Chr8g0359821 27.066 484 291 13 18 454 10 478 7.77e-49 174
Msa0505360 MtrunA17_Chr7g0249931 30.369 461 283 15 18 455 40 485 8.07e-49 174
Msa0505360 MtrunA17_Chr3g0118771 29.461 482 282 18 18 454 21 489 4.48e-48 172
Msa0505360 MtrunA17_Chr6g0454121 28.601 486 288 15 15 454 7 479 1.21e-47 171
Msa0505360 MtrunA17_Chr1g0207981 27.637 474 301 12 18 458 13 477 1.48e-47 171
Msa0505360 MtrunA17_Chr6g0454291 27.686 484 290 15 18 454 7 477 1.75e-47 171
Msa0505360 MtrunA17_Chr2g0278711 26.708 483 292 15 18 454 11 477 2.39e-47 170
Msa0505360 MtrunA17_Chr3g0118691 29.555 494 290 20 7 454 2 483 7.32e-47 169
Msa0505360 MtrunA17_Chr6g0454201 27.801 482 292 15 18 454 11 481 1.09e-46 168
Msa0505360 MtrunA17_Chr3g0118701 27.935 494 298 18 7 454 2 483 1.17e-46 168
Msa0505360 MtrunA17_Chr6g0453961 27.893 484 290 15 18 454 19 490 1.33e-46 168
Msa0505360 MtrunA17_Chr6g0454361 27.386 482 294 14 18 454 11 481 1.81e-46 168
Msa0505360 MtrunA17_Chr3g0118661 29.186 442 250 16 18 411 13 439 2.04e-46 167
Msa0505360 MtrunA17_Chr6g0454401 26.653 484 296 15 18 454 10 481 2.43e-46 167
Msa0505360 MtrunA17_Chr6g0454181 26.860 484 294 14 18 454 10 480 1.17e-45 166
Msa0505360 MtrunA17_Chr6g0454301 28.333 480 290 14 18 454 263 731 1.41e-45 169
Msa0505360 MtrunA17_Chr6g0454301 29.915 234 145 4 232 454 5 230 1.14e-29 122
Msa0505360 MtrunA17_Chr6g0454261 26.087 483 299 12 18 454 10 480 1.43e-45 165
Msa0505360 MtrunA17_Chr3g0118711 27.651 481 292 15 18 454 13 481 1.71e-45 165
Msa0505360 MtrunA17_Chr6g0454321 28.270 474 282 15 18 446 10 470 2.24e-45 167
Msa0505360 MtrunA17_Chr4g0053321 26.962 497 300 16 19 474 27 501 2.63e-45 165
Msa0505360 MtrunA17_Chr6g0454131 28.512 484 291 13 15 454 7 479 3.92e-45 164
Msa0505360 MtrunA17_Chr7g0232411 27.601 471 273 16 18 442 6 454 1.62e-44 162
Msa0505360 MtrunA17_Chr4g0050341 27.010 485 286 16 18 450 19 487 5.01e-44 161
Msa0505360 MtrunA17_Chr1g0207971 28.821 458 292 16 18 453 8 453 6.26e-44 160
Msa0505360 MtrunA17_Chr7g0265101 28.125 512 279 19 6 455 4 488 9.83e-44 160
Msa0505360 MtrunA17_Chr1g0207951 28.664 464 294 15 18 457 124 574 4.73e-43 163
Msa0505360 MtrunA17_Chr1g0207951 29.263 475 283 19 18 457 656 1112 9.53e-42 159
Msa0505360 MtrunA17_Chr7g0217881 27.557 479 279 13 18 454 10 462 5.69e-43 158
Msa0505360 MtrunA17_Chr6g0452771 25.755 497 283 14 18 454 10 480 6.38e-43 158
Msa0505360 MtrunA17_Chr3g0098111 27.010 485 289 15 18 457 9 473 1.31e-42 157
Msa0505360 MtrunA17_Chr5g0440421 26.044 503 290 18 18 455 10 495 2.45e-42 157
Msa0505360 MtrunA17_Chr5g0423981 26.907 472 274 14 18 454 10 445 3.04e-42 155
Msa0505360 MtrunA17_Chr4g0011051 27.309 498 285 17 18 455 9 489 3.25e-42 156
Msa0505360 MtrunA17_Chr7g0275511 28.803 493 271 16 1 442 1 464 5.39e-42 155
Msa0505360 MtrunA17_Chr7g0265051 27.545 501 294 17 6 455 4 486 5.98e-42 156
Msa0505360 MtrunA17_Chr6g0453951 26.349 482 299 16 18 454 57 527 6.61e-42 156
Msa0505360 MtrunA17_Chr7g0265151 25.873 487 302 14 18 455 9 485 9.34e-42 155
Msa0505360 MtrunA17_Chr8g0365811 27.637 474 292 13 19 453 496 957 2.00e-41 158
Msa0505360 MtrunA17_Chr8g0365811 29.108 426 255 15 18 403 9 427 2.29e-36 143
Msa0505360 MtrunA17_Chr7g0243771 27.789 475 285 16 18 446 6 468 3.13e-41 154
Msa0505360 MtrunA17_Chr6g0454211 26.044 503 274 17 18 454 297 767 4.48e-41 156
Msa0505360 MtrunA17_Chr6g0454211 29.703 202 114 5 167 363 58 236 5.76e-19 90.1
Msa0505360 MtrunA17_Chr5g0432741 51.974 152 63 3 15 159 7 155 4.76e-41 144
Msa0505360 MtrunA17_Chr8g0347281 26.915 483 290 12 1 442 1 461 5.28e-41 153
Msa0505360 MtrunA17_Chr6g0454351 26.611 481 282 17 18 454 12 465 6.13e-41 152
Msa0505360 MtrunA17_Chr7g0275681 26.844 488 290 17 18 455 12 482 1.27e-40 152
Msa0505360 MtrunA17_Chr1g0207861 28.313 498 260 16 17 453 7 468 1.27e-40 152
Msa0505360 MtrunA17_Chr7g0243871 27.423 485 298 14 18 461 9 480 2.78e-40 151
Msa0505360 MtrunA17_Chr8g0335141 27.115 461 288 12 19 443 10 458 3.10e-40 150
Msa0505360 MtrunA17_Chr7g0243951 26.931 479 287 16 18 446 11 476 3.72e-40 150
Msa0505360 MtrunA17_Chr7g0232391 27.991 468 275 16 18 442 6 454 3.91e-40 150
Msa0505360 MtrunA17_Chr8g0335161 27.234 470 279 14 17 442 5 455 8.98e-40 149
Msa0505360 MtrunA17_Chr7g0249961 37.238 239 134 7 235 463 38 270 9.84e-40 144
Msa0505360 MtrunA17_Chr7g0243631 27.273 473 294 13 18 446 13 479 2.44e-39 149
Msa0505360 MtrunA17_Chr3g0112771 26.483 472 294 16 12 454 5 452 2.73e-39 147
Msa0505360 MtrunA17_Chr7g0243931 27.027 481 285 18 18 446 17 483 4.08e-39 148
Msa0505360 MtrunA17_Chr3g0118751 27.754 472 274 19 18 454 6 445 5.83e-39 147
Msa0505360 MtrunA17_Chr3g0112761 25.673 483 304 16 12 463 2 460 1.00e-38 146
Msa0505360 MtrunA17_Chr7g0218831 27.564 468 271 17 16 450 4 436 2.36e-38 145
Msa0505360 MtrunA17_Chr7g0232341 25.979 485 293 15 17 456 5 468 2.44e-38 145
Msa0505360 MtrunA17_Chr7g0243801 27.368 475 287 15 18 446 7 469 2.76e-38 145
Msa0505360 MtrunA17_Chr1g0161351 28.298 470 294 14 18 453 37 497 2.99e-38 145
Msa0505360 MtrunA17_Chr8g0336691 27.331 472 286 13 12 442 913 1368 3.39e-38 149
Msa0505360 MtrunA17_Chr8g0336691 25.105 474 282 13 18 442 13 462 7.67e-36 142
Msa0505360 MtrunA17_Chr8g0336691 27.033 455 281 13 12 442 474 901 6.26e-34 136
Msa0505360 MtrunA17_Chr1g0207931 25.941 478 248 11 18 457 92 501 3.61e-38 145
Msa0505360 MtrunA17_Chr5g0429711 26.501 483 284 16 17 456 10 464 4.49e-38 144
Msa0505360 MtrunA17_Chr7g0232331 26.096 479 298 15 17 455 5 467 5.31e-38 144
Msa0505360 MtrunA17_Chr4g0014061 26.078 464 293 13 19 443 10 462 6.52e-38 144
Msa0505360 MtrunA17_Chr7g0265041 25.051 491 312 12 14 455 7 490 8.80e-38 144
Msa0505360 MtrunA17_Chr7g0218841 26.566 463 283 16 16 450 4 437 1.05e-37 143
Msa0505360 MtrunA17_Chr5g0442561 25.000 496 294 14 14 454 1 473 1.11e-37 144
Msa0505360 MtrunA17_Chr7g0218811 27.489 462 284 17 14 450 11 446 1.21e-37 143
Msa0505360 MtrunA17_Chr8g0347271 26.653 484 286 14 3 442 4 462 1.25e-37 143
Msa0505360 MtrunA17_Chr7g0243861 28.226 496 286 19 5 446 1 480 1.75e-37 143
Msa0505360 MtrunA17_Chr8g0361411 25.586 469 309 12 12 455 2 455 1.91e-37 142
Msa0505360 MtrunA17_Chr7g0243681 27.215 474 288 17 18 446 11 472 2.07e-37 143
Msa0505360 MtrunA17_Chr1g0207831 27.273 473 288 16 19 453 9 463 2.37e-37 142
Msa0505360 MtrunA17_Chr7g0218791 28.947 456 265 18 18 440 5 434 3.74e-37 141
Msa0505360 MtrunA17_Chr1g0179901 25.388 516 305 19 6 460 4 500 4.66e-37 142
Msa0505360 MtrunA17_Chr6g0459311 26.282 468 280 15 19 442 14 460 6.32e-37 141
Msa0505360 MtrunA17_Chr5g0419761 25.558 493 298 13 18 455 9 487 7.94e-37 141
Msa0505360 MtrunA17_Chr4g0044521 27.706 462 290 12 23 451 14 464 8.24e-37 141
Msa0505360 MtrunA17_Chr5g0448521 25.657 495 279 17 18 454 5 468 9.01e-37 141
Msa0505360 MtrunA17_Chr8g0336651 26.708 483 277 16 12 442 775 1232 9.56e-37 144
Msa0505360 MtrunA17_Chr8g0336651 26.216 473 276 16 18 442 6 453 1.38e-32 132
Msa0505360 MtrunA17_Chr8g0336651 32.394 213 119 6 232 442 574 763 5.12e-26 112
Msa0505360 MtrunA17_Chr1g0153451 25.212 472 291 12 18 447 6 457 1.06e-36 140
Msa0505360 MtrunA17_Chr5g0412111 26.195 481 294 15 18 457 5 465 1.97e-36 140
Msa0505360 MtrunA17_Chr8g0336741 27.862 463 279 14 18 441 13 459 1.99e-36 140
Msa0505360 MtrunA17_Chr7g0218821 25.523 478 284 15 14 450 1 447 5.79e-36 138
Msa0505360 MtrunA17_Chr5g0426401 29.595 321 197 9 153 454 1 311 7.76e-36 135
Msa0505360 MtrunA17_Chr4g0032331 25.800 469 288 15 19 454 9 450 7.76e-36 138
Msa0505360 MtrunA17_Chr4g0066281 25.265 471 293 13 22 453 16 466 7.93e-36 138
Msa0505360 MtrunA17_Chr6g0462551 25.427 468 303 12 16 447 1 458 1.16e-35 138
Msa0505360 MtrunA17_Chr6g0486251 25.745 470 280 15 19 442 7 453 1.18e-35 137
Msa0505360 MtrunA17_Chr6g0486201 25.745 470 280 15 19 442 7 453 1.18e-35 137
Msa0505360 MtrunA17_Chr3g0079731 25.413 484 280 18 19 442 7 469 1.56e-35 137
Msa0505360 MtrunA17_Chr6g0454171 31.650 297 164 8 173 454 38 310 1.63e-35 134
Msa0505360 MtrunA17_Chr5g0419771 26.305 498 296 18 13 454 31 513 2.89e-35 137
Msa0505360 MtrunA17_Chr8g0370941 25.257 487 287 15 17 442 7 477 5.66e-35 136
Msa0505360 MtrunA17_Chr5g0393591 25.000 488 259 16 16 458 15 440 6.06e-35 135
Msa0505360 MtrunA17_Chr8g0373301 27.950 483 266 18 12 442 3 455 6.60e-35 135
Msa0505360 MtrunA17_Chr8g0366391 25.615 488 292 15 18 453 9 477 1.18e-34 135
Msa0505360 MtrunA17_Chr6g0449931 26.316 475 290 14 15 446 3 460 2.32e-34 134
Msa0505360 MtrunA17_Chr7g0243761 27.294 436 273 13 9 403 2 434 3.28e-34 134
Msa0505360 MtrunA17_Chr7g0265141 25.880 483 301 13 18 451 9 483 3.37e-34 134
Msa0505360 MtrunA17_Chr5g0412101 25.514 486 307 14 11 457 5 474 3.67e-34 134
Msa0505360 MtrunA17_Chr7g0243781 26.305 479 298 14 18 453 9 475 3.87e-34 134
Msa0505360 MtrunA17_Chr8g0361371 27.368 475 271 20 19 442 8 459 6.80e-34 133
Msa0505360 MtrunA17_Chr5g0401851 27.455 499 296 18 5 453 1 483 1.12e-33 132
Msa0505360 MtrunA17_Chr7g0235051 26.427 473 267 17 18 446 11 446 1.57e-33 132
Msa0505360 MtrunA17_Chr2g0302961 24.536 485 305 17 14 455 1 467 1.72e-33 132
Msa0505360 MtrunA17_Chr6g0454221 31.466 232 139 4 232 451 5 228 1.86e-33 128
Msa0505360 MtrunA17_Chr7g0232401 26.141 482 298 16 18 457 6 471 2.03e-33 131
Msa0505360 MtrunA17_Chr6g0462571 24.211 475 288 12 21 447 5 455 2.36e-33 131
Msa0505360 MtrunA17_Chr5g0442581 23.952 501 314 13 14 462 1 486 2.55e-33 132
Msa0505360 MtrunA17_Chr5g0442601 24.000 500 304 15 11 454 397 876 2.92e-33 134
Msa0505360 MtrunA17_Chr5g0442601 23.398 359 198 10 69 388 16 336 1.78e-20 95.1
Msa0505360 MtrunA17_Chr6g0454271 27.698 278 181 5 188 454 19 287 3.59e-33 127
Msa0505360 MtrunA17_Chr6g0462531 26.360 478 267 15 21 442 5 453 5.79e-33 130
Msa0505360 MtrunA17_Chr2g0302991 23.640 478 315 14 14 455 1 464 7.93e-33 130
Msa0505360 MtrunA17_Chr3g0118721 29.699 266 164 6 203 454 34 290 8.16e-33 126
Msa0505360 MtrunA17_Chr8g0336731 25.902 471 276 14 20 442 34 479 1.11e-32 130
Msa0505360 MtrunA17_Chr4g0060511 26.205 477 297 18 18 446 11 480 1.24e-32 130
Msa0505360 MtrunA17_Chr8g0334861 26.556 482 280 16 17 450 5 460 3.00e-32 128
Msa0505360 MtrunA17_Chr5g0412131 25.988 481 302 15 11 453 5 469 3.88e-32 128
Msa0505360 MtrunA17_Chr5g0442541 23.729 472 299 11 14 442 1 454 5.83e-32 127
Msa0505360 MtrunA17_Chr4g0044511 25.106 470 291 13 18 442 40 493 6.97e-32 127
Msa0505360 MtrunA17_Chr4g0066221 25.052 479 303 15 22 455 15 482 8.09e-32 127
Msa0505360 MtrunA17_Chr7g0243711 36.019 211 111 6 257 446 102 309 1.01e-31 124
Msa0505360 MtrunA17_Chr5g0442491 23.483 511 279 15 17 454 4 475 1.65e-31 126
Msa0505360 MtrunA17_Chr5g0428081 24.524 473 308 12 22 453 15 479 1.93e-31 126
Msa0505360 MtrunA17_Chr4g0044501 25.527 474 307 15 18 453 10 475 2.02e-31 126
Msa0505360 MtrunA17_Chr5g0442521 23.285 481 294 14 17 442 4 464 2.29e-31 125
Msa0505360 MtrunA17_Chr8g0339461 28.191 376 202 13 111 442 109 460 2.90e-31 125
Msa0505360 MtrunA17_Chr1g0159551 32.407 216 127 4 255 453 246 459 3.02e-31 125
Msa0505360 MtrunA17_Chr5g0420801 23.967 484 312 15 15 462 4 467 3.54e-31 125
Msa0505360 MtrunA17_Chr6g0462541 24.841 471 292 13 21 447 5 457 4.15e-31 125
Msa0505360 MtrunA17_Chr8g0374941 22.037 481 318 13 21 456 952 1420 5.02e-31 127
Msa0505360 MtrunA17_Chr8g0374941 23.144 458 307 14 21 439 14 465 9.40e-27 114
Msa0505360 MtrunA17_Chr8g0374941 23.947 451 290 13 21 428 479 919 1.27e-24 108
Msa0505360 MtrunA17_Chr4g0066201 26.327 471 290 16 22 453 22 474 5.68e-31 125
Msa0505360 MtrunA17_Chr6g0454251 25.505 396 237 12 18 363 7 394 5.76e-31 123
Msa0505360 MtrunA17_Chr5g0429681 26.186 485 283 19 17 454 43 499 6.62e-31 125
Msa0505360 MtrunA17_Chr8g0355221 25.205 488 303 16 15 453 12 486 6.69e-31 125
Msa0505360 MtrunA17_Chr2g0329111 23.265 490 316 15 19 459 7 485 8.15e-31 124
Msa0505360 MtrunA17_Chr6g0462521 25.217 460 281 13 21 442 5 439 8.35e-31 124
Msa0505360 MtrunA17_Chr6g0463861 24.788 472 302 15 22 453 15 473 2.19e-30 123
Msa0505360 MtrunA17_Chr7g0243851 32.453 265 146 8 209 446 177 435 2.52e-30 122
Msa0505360 MtrunA17_Chr8g0334831 26.496 468 268 17 19 430 7 454 2.84e-30 123
Msa0505360 MtrunA17_Chr4g0066261 33.636 220 121 5 258 453 263 481 4.43e-30 122
Msa0505360 MtrunA17_Chr8g0355011 24.185 368 205 9 111 454 45 362 6.36e-30 120
Msa0505360 MtrunA17_Chr4g0042931 26.569 478 284 17 18 451 7 461 8.06e-30 121
Msa0505360 MtrunA17_Chr8g0339601 31.343 268 138 8 205 441 66 318 8.27e-30 119
Msa0505360 MtrunA17_Chr8g0374901 23.729 472 313 13 21 453 15 478 1.15e-29 121
Msa0505360 MtrunA17_Chr4g0042891 32.296 257 139 10 216 451 221 463 1.20e-29 120
Msa0505360 MtrunA17_Chr8g0369341 22.874 494 307 12 15 458 4 473 1.42e-29 120
Msa0505360 MtrunA17_Chr1g0173121 33.173 208 120 4 263 453 257 462 1.98e-29 120
Msa0505360 MtrunA17_Chr4g0066171 24.255 470 304 14 22 455 25 478 2.95e-29 120
Msa0505360 MtrunA17_Chr8g0339451 31.599 269 138 9 205 442 199 452 3.19e-29 119
Msa0505360 MtrunA17_Chr4g0066131 23.517 472 307 12 19 450 14 471 3.57e-29 119
Msa0505360 MtrunA17_Chr7g0232351 26.087 391 226 10 18 363 6 378 4.80e-29 117
Msa0505360 MtrunA17_Chr5g0403641 29.433 282 158 6 202 452 230 501 2.13e-28 117
Msa0505360 MtrunA17_Chr2g0307961 23.529 476 306 15 18 454 13 469 6.25e-28 115
Msa0505360 MtrunA17_Chr5g0442511 24.034 466 283 15 17 442 48 482 8.57e-28 115
Msa0505360 MtrunA17_Chr7g0241781 23.095 433 280 14 18 431 9 407 1.65e-27 114
Msa0505360 MtrunA17_Chr4g0066151 23.651 482 311 16 12 453 15 479 1.76e-27 115
Msa0505360 MtrunA17_Chr6g0463891 25.403 496 307 17 19 465 13 494 1.77e-27 115
Msa0505360 MtrunA17_Chr8g0374971 24.008 479 296 17 13 453 32 480 1.80e-27 115
Msa0505360 MtrunA17_Chr7g0232311 30.980 255 138 8 212 442 212 452 2.08e-27 114
Msa0505360 MtrunA17_Chr8g0339631 25.198 504 286 21 17 461 5 476 2.43e-27 114
Msa0505360 MtrunA17_Chr6g0454371 34.286 175 98 3 289 454 5 171 2.48e-27 107
Msa0505360 MtrunA17_Chr8g0334851 29.276 304 167 10 170 442 172 458 2.73e-27 114
Msa0505360 MtrunA17_Chr7g0218311 34.389 221 118 5 252 446 257 476 4.48e-27 114
Msa0505360 MtrunA17_Chr6g0482061 26.644 289 175 7 182 447 199 473 5.01e-27 113
Msa0505360 MtrunA17_Chr6g0463851 21.921 479 316 10 22 453 15 482 5.61e-27 113
Msa0505360 MtrunA17_Chr5g0431391 39.623 159 53 5 9 160 33 155 7.72e-27 108
Msa0505360 MtrunA17_Chr1g0165701 24.089 494 326 15 15 467 12 497 1.14e-26 112
Msa0505360 MtrunA17_Chr5g0410941 30.667 225 129 5 255 453 266 489 1.51e-26 112
Msa0505360 MtrunA17_Chr8g0350881 26.855 283 180 5 200 456 202 483 2.01e-26 112
Msa0505360 MtrunA17_Chr7g0243911 33.663 202 114 6 255 437 14 214 2.12e-26 106
Msa0505360 MtrunA17_Chr7g0243611 32.642 193 112 4 209 385 80 270 4.76e-26 107
Msa0505360 MtrunA17_Chr8g0382021 30.137 219 131 4 255 453 272 488 4.91e-26 110
Msa0505360 MtrunA17_Chr1g0153461 30.736 231 119 6 263 468 4 218 5.51e-26 105
Msa0505360 MtrunA17_Chr5g0409591 23.060 451 280 12 19 411 5 446 1.54e-25 109
Msa0505360 MtrunA17_Chr7g0241801 24.091 440 278 17 11 431 5 407 2.02e-25 108
Msa0505360 MtrunA17_Chr2g0294931 28.169 284 174 7 200 456 204 484 2.89e-25 108
Msa0505360 MtrunA17_Chr1g0207881 24.444 450 263 12 18 458 8 389 3.52e-25 107
Msa0505360 MtrunA17_Chr4g0044481 25.500 400 238 11 17 385 26 396 4.90e-25 107
Msa0505360 MtrunA17_Chr4g0069611 23.423 444 291 13 18 431 15 439 6.49e-25 107
Msa0505360 MtrunA17_Chr7g0265111 22.222 495 330 15 10 456 31 518 6.98e-25 107
Msa0505360 MtrunA17_Chr7g0243811 32.110 218 124 5 204 407 187 394 1.20e-24 105
Msa0505360 MtrunA17_Chr8g0339441 31.731 208 107 6 263 442 218 418 1.30e-24 105
Msa0505360 MtrunA17_Chr8g0367221 24.123 456 279 16 18 429 1288 1720 8.37e-24 105
Msa0505360 MtrunA17_Chr8g0367221 23.934 422 253 15 18 393 798 1197 2.41e-22 101
Msa0505360 MtrunA17_Chr8g0367221 24.096 415 260 15 18 393 12 410 3.42e-21 97.4
Msa0505360 MtrunA17_Chr2g0294921 23.044 473 317 13 22 453 164 630 1.61e-23 103
Msa0505360 MtrunA17_Chr2g0278741 24.434 442 288 14 18 428 97 523 1.89e-23 103
Msa0505360 MtrunA17_Chr5g0448551 23.319 476 305 15 19 462 8 455 3.18e-23 102
Msa0505360 MtrunA17_Chr4g0072771 21.645 462 311 12 18 451 25 463 4.78e-23 101
Msa0505360 MtrunA17_Chr8g0374931 26.354 277 178 5 202 453 206 481 5.57e-23 101
Msa0505360 MtrunA17_Chr8g0336261 37.879 132 67 2 289 411 5 130 6.22e-23 94.4
Msa0505360 MtrunA17_Chr2g0278721 24.944 449 277 16 18 428 15 441 8.04e-23 102
Msa0505360 MtrunA17_Chr2g0278721 23.297 455 286 15 18 428 517 952 3.42e-21 97.4
Msa0505360 MtrunA17_Chr5g0416741 23.750 480 297 16 19 446 14 476 1.02e-22 100
Msa0505360 MtrunA17_Chr2g0294941 31.000 200 113 4 263 438 166 364 1.74e-21 95.9
Msa0505360 MtrunA17_Chr4g0072761 20.645 465 309 15 18 451 15 450 2.33e-21 96.7
Msa0505360 MtrunA17_Chr7g0250021 27.922 308 197 10 18 309 12 310 4.40e-21 94.0
Msa0505360 MtrunA17_Chr3g0079711 31.285 179 96 5 288 442 2 177 4.55e-21 90.9
Msa0505360 MtrunA17_Chr6g0466831 22.172 442 305 14 12 428 12 439 7.42e-21 95.1
Msa0505360 MtrunA17_Chr8g0336251 23.758 463 270 16 18 427 7 439 2.34e-20 93.6
Msa0505360 MtrunA17_Chr5g0427571 27.848 237 152 6 205 427 42 273 2.63e-20 91.3
Msa0505360 MtrunA17_Chr6g0466841 22.222 423 290 13 12 408 12 421 3.01e-20 93.2
Msa0505360 MtrunA17_Chr8g0336321 23.758 463 270 16 18 427 7 439 3.38e-20 93.2
Msa0505360 MtrunA17_Chr6g0454231 27.273 253 147 7 204 455 4 220 3.53e-20 93.2
Msa0505360 MtrunA17_Chr2g0302851 22.222 441 300 12 18 431 16 440 8.50e-20 92.0
Msa0505360 MtrunA17_Chr4g0039881 22.811 434 286 13 28 431 2 416 3.32e-19 89.7
Msa0505360 MtrunA17_Chr6g0464091 22.737 453 290 13 18 431 18 449 2.71e-18 87.4
Msa0505360 MtrunA17_Chr5g0416821 24.000 400 249 15 98 466 109 484 1.34e-17 85.1
Msa0505360 MtrunA17_Chr7g0231631 26.190 252 162 8 209 446 11 252 1.48e-17 82.8
Msa0505360 MtrunA17_Chr3g0092031 30.233 172 108 4 265 428 6 173 2.90e-17 80.1
Msa0505360 MtrunA17_Chr8g0337381 35.897 117 67 3 327 442 5 114 1.45e-16 76.3
Msa0505360 MtrunA17_Chr4g0029151 22.573 443 281 13 18 423 20 437 1.42e-15 79.0
Msa0505360 MtrunA17_Chr4g0066141 28.846 156 100 4 306 453 199 351 1.96e-15 77.8
Msa0505360 MtrunA17_Chr2g0319791 25.217 230 142 5 215 429 220 434 6.44e-15 76.6
Msa0505360 MtrunA17_Chr4g0029131 26.033 242 152 5 197 423 200 429 1.02e-14 76.6
Msa0505360 MtrunA17_Chr2g0283041 22.819 447 275 17 18 422 7 425 1.85e-14 75.5
Msa0505360 MtrunA17_Chr8g0357361 26.042 192 133 3 202 385 58 248 1.73e-13 70.5
Msa0505360 MtrunA17_Chr1g0196851 23.868 243 150 6 200 423 243 469 6.98e-13 70.5
Msa0505360 MtrunA17_Chr2g0319761 21.957 460 278 14 18 429 8 434 7.51e-13 70.5
Msa0505360 MtrunA17_Chr7g0243731 43.421 76 41 2 321 394 5 80 1.16e-12 63.5
Msa0505360 MtrunA17_Chr2g0319731 22.440 459 292 17 9 429 19 451 1.43e-12 69.7
Msa0505360 MtrunA17_Chr8g0334841 32.867 143 84 5 170 309 1 134 4.78e-12 64.3
Msa0505360 MtrunA17_Chr2g0319801 21.616 458 297 17 9 429 2 434 8.18e-12 67.0
Msa0505360 MtrunA17_Chr2g0319751 23.789 227 149 5 215 429 697 911 3.79e-11 65.9
Msa0505360 MtrunA17_Chr6g0454391 33.654 104 50 3 338 429 11 107 4.64e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0505360 AT2G30150.2 45.474 464 227 7 7 455 2 454 5.71e-142 415
Msa0505360 AT2G30140.2 45.455 462 230 7 7 456 2 453 1.59e-139 409
Msa0505360 AT2G30150.1 45.880 449 217 7 22 455 1 438 4.90e-138 404
Msa0505360 AT2G30140.1 45.140 463 231 7 7 456 2 454 6.19e-138 405
Msa0505360 AT1G05675.1 29.718 461 281 11 17 450 5 449 7.54e-58 198
Msa0505360 AT1G22400.1 29.363 487 277 16 18 454 13 482 3.13e-57 197
Msa0505360 AT1G22360.1 28.041 485 285 14 18 454 10 478 8.54e-57 196
Msa0505360 AT1G05680.1 29.348 460 284 11 17 450 5 449 1.92e-56 194
Msa0505360 AT2G36970.1 27.912 498 287 16 18 466 10 484 9.67e-56 193
Msa0505360 AT2G31750.2 30.968 465 282 16 17 456 7 457 3.61e-55 192
Msa0505360 AT2G31750.1 30.886 463 281 16 17 454 7 455 3.76e-55 191
Msa0505360 AT2G28080.1 30.417 480 264 15 22 466 22 466 1.41e-54 190
Msa0505360 AT1G22340.1 28.834 489 280 16 18 453 13 486 3.83e-52 184
Msa0505360 AT1G05560.2 27.010 485 293 13 10 458 47 506 5.42e-52 184
Msa0505360 AT1G05560.1 27.044 477 287 13 18 458 5 456 5.71e-52 182
Msa0505360 AT1G22360.2 27.629 485 275 14 18 454 10 466 7.02e-52 182
Msa0505360 AT1G78270.1 29.375 480 285 14 18 454 13 481 6.71e-51 180
Msa0505360 AT1G05530.1 26.891 476 292 12 14 454 1 455 8.48e-51 179
Msa0505360 AT1G22380.1 27.122 483 292 15 18 454 13 481 1.79e-50 179
Msa0505360 AT4G15550.1 28.601 486 280 12 15 454 10 474 2.08e-49 176
Msa0505360 AT2G43840.2 28.694 467 275 13 18 453 7 446 3.99e-49 174
Msa0505360 AT2G23260.1 27.473 455 302 13 17 453 9 453 2.03e-48 173
Msa0505360 AT2G43840.1 28.908 467 274 14 18 453 7 446 2.63e-48 172
Msa0505360 AT3G21560.1 26.275 510 308 17 1 467 1 485 6.58e-47 169
Msa0505360 AT4G15490.1 28.778 483 302 16 17 467 7 479 6.99e-47 169
Msa0505360 AT4G01070.1 27.813 471 272 15 18 442 8 456 7.72e-47 169
Msa0505360 AT2G43820.1 28.758 459 285 14 18 453 7 446 1.49e-46 167
Msa0505360 AT2G23250.1 29.888 445 278 19 27 453 7 435 5.00e-46 166
Msa0505360 AT4G15480.1 28.513 491 288 18 18 465 19 489 5.68e-46 167
Msa0505360 AT2G31790.1 28.664 464 284 17 17 450 7 453 1.87e-45 165
Msa0505360 AT1G24100.1 25.957 470 292 12 18 453 11 458 7.10e-45 163
Msa0505360 AT1G22370.2 27.463 477 293 16 18 454 13 476 2.58e-44 162
Msa0505360 AT1G10400.1 27.066 484 293 19 14 457 3 466 3.26e-44 162
Msa0505360 AT3G21790.1 26.477 491 290 15 18 453 4 478 2.29e-42 157
Msa0505360 AT3G21800.1 24.375 480 312 11 19 455 6 477 8.49e-42 155
Msa0505360 AT2G36750.1 27.959 490 287 17 18 455 10 485 8.99e-42 155
Msa0505360 AT2G16890.2 27.423 485 299 20 18 464 9 478 3.17e-41 154
Msa0505360 AT3G02100.1 28.425 489 271 19 7 450 2 456 1.09e-40 152
Msa0505360 AT4G15500.1 26.778 478 294 16 15 455 6 464 2.22e-40 151
Msa0505360 AT3G53150.1 28.032 503 284 17 18 455 22 511 3.04e-40 152
Msa0505360 AT5G14860.1 27.108 498 277 22 18 456 8 478 9.70e-40 150
Msa0505360 AT5G59590.1 26.250 480 282 14 12 453 4 449 9.96e-40 149
Msa0505360 AT3G53160.1 24.948 485 309 12 18 455 8 484 1.35e-39 149
Msa0505360 AT5G03490.1 27.039 466 284 15 18 451 19 460 1.90e-39 149
Msa0505360 AT2G36780.1 26.166 493 293 18 18 455 14 490 2.94e-39 149
Msa0505360 AT2G36800.1 24.514 514 276 16 18 455 12 489 6.75e-39 147
Msa0505360 AT3G21780.1 26.294 483 297 14 18 456 4 471 1.48e-38 146
Msa0505360 AT5G59580.1 25.536 466 290 12 18 453 9 447 2.21e-38 145
Msa0505360 AT3G46700.1 26.549 452 290 10 12 442 3 433 3.63e-38 145
Msa0505360 AT3G46660.1 27.039 466 284 13 19 453 15 455 6.53e-38 144
Msa0505360 AT3G46670.1 25.974 462 288 12 18 450 9 445 1.35e-37 143
Msa0505360 AT5G38040.1 27.193 456 280 14 26 453 18 449 1.75e-37 143
Msa0505360 AT2G36770.1 25.247 507 306 18 5 455 1 490 3.24e-37 143
Msa0505360 AT3G21760.1 24.851 503 291 17 18 456 4 483 1.22e-36 141
Msa0505360 AT4G14090.1 24.675 462 297 14 18 450 13 452 4.98e-36 139
Msa0505360 AT3G46680.1 25.108 462 277 13 18 442 9 438 7.09e-36 138
Msa0505360 AT3G46720.1 27.093 454 281 12 12 442 3 429 1.62e-35 137
Msa0505360 AT3G46650.1 26.211 454 278 14 18 449 10 428 2.25e-35 137
Msa0505360 AT3G11340.1 25.373 469 284 15 19 454 10 445 2.71e-35 137
Msa0505360 AT4G15280.1 24.486 486 307 13 18 456 4 476 4.16e-35 137
Msa0505360 AT1G01420.2 26.201 458 269 15 18 429 11 445 5.07e-35 137
Msa0505360 AT5G26310.1 25.417 480 281 14 14 442 3 456 5.33e-35 136
Msa0505360 AT1G01420.1 26.201 458 269 15 18 429 8 442 5.88e-35 136
Msa0505360 AT3G21750.1 24.385 488 300 11 18 456 4 471 7.76e-35 136
Msa0505360 AT4G15280.2 24.486 486 307 13 18 456 36 508 8.24e-35 136
Msa0505360 AT2G29740.1 24.948 485 299 15 17 453 7 474 1.65e-34 135
Msa0505360 AT5G38010.1 26.724 464 292 12 18 453 10 453 1.90e-34 134
Msa0505360 AT2G16890.3 27.294 436 253 19 18 409 9 424 1.98e-34 134
Msa0505360 AT1G73880.1 25.205 488 294 17 15 458 11 471 3.82e-34 134
Msa0505360 AT2G29730.1 23.800 479 303 12 18 454 5 463 4.98e-34 134
Msa0505360 AT3G46690.1 26.362 459 287 12 12 442 3 438 6.90e-34 133
Msa0505360 AT2G36790.1 25.050 503 286 17 18 455 13 489 1.19e-33 133
Msa0505360 AT4G34138.1 24.748 497 300 16 10 453 3 478 1.06e-32 130
Msa0505360 AT2G36760.1 25.202 496 294 20 18 455 14 490 1.28e-32 130
Msa0505360 AT4G34131.1 24.319 477 309 12 18 451 10 477 1.36e-32 130
Msa0505360 AT5G05900.1 26.407 462 290 14 19 453 9 447 2.62e-32 128
Msa0505360 AT4G36770.1 24.468 470 277 16 18 436 4 446 4.88e-32 128
Msa0505360 AT2G29710.1 23.222 478 309 14 17 454 4 463 6.85e-32 127
Msa0505360 AT2G15480.2 25.269 372 251 8 107 453 121 490 9.52e-32 127
Msa0505360 AT1G07260.1 25.820 488 292 18 17 454 5 472 1.22e-31 127
Msa0505360 AT3G50740.1 25.263 475 267 16 14 429 3 448 1.93e-31 126
Msa0505360 AT1G07250.1 25.662 491 296 18 17 457 5 476 2.39e-31 126
Msa0505360 AT5G17040.1 25.652 460 299 15 17 455 4 441 3.58e-31 125
Msa0505360 AT1G51210.1 25.339 442 287 15 11 428 10 432 4.56e-31 124
Msa0505360 AT5G17050.1 24.145 468 304 14 17 454 11 457 8.28e-31 124
Msa0505360 AT4G15260.1 25.676 370 228 9 120 456 2 357 2.03e-30 121
Msa0505360 AT2G15480.1 25.275 364 251 8 107 453 121 480 2.39e-30 123
Msa0505360 AT3G55700.1 27.491 291 183 5 176 454 177 451 3.54e-30 122
Msa0505360 AT2G15490.3 23.542 480 314 16 18 453 7 477 4.92e-30 122
Msa0505360 AT2G15490.1 23.395 483 314 16 18 453 7 480 5.64e-30 122
Msa0505360 AT2G26480.1 24.236 458 305 12 19 454 9 446 5.94e-30 122
Msa0505360 AT5G66690.1 26.115 471 285 17 14 440 3 454 6.76e-30 122
Msa0505360 AT1G01390.1 26.638 458 268 16 18 429 8 443 9.82e-30 121
Msa0505360 AT1G01390.2 26.638 458 268 16 18 429 25 460 1.10e-29 122
Msa0505360 AT2G18570.1 24.094 469 294 16 18 442 5 455 8.70e-29 119
Msa0505360 AT2G29750.1 25.000 492 295 20 17 456 7 476 1.11e-28 118
Msa0505360 AT4G34135.1 24.829 439 277 14 18 411 11 441 2.21e-28 117
Msa0505360 AT3G16520.3 27.624 362 219 12 115 452 116 458 2.21e-28 117
Msa0505360 AT5G05870.1 23.840 474 296 11 18 453 8 454 5.05e-28 116
Msa0505360 AT1G07240.1 25.798 376 220 11 115 454 124 476 5.78e-28 116
Msa0505360 AT3G55710.1 29.134 254 153 7 215 454 215 455 5.94e-28 116
Msa0505360 AT1G30530.1 24.183 459 311 13 17 455 11 452 8.39e-28 115
Msa0505360 AT5G05890.1 25.602 457 285 14 18 442 8 441 3.33e-27 114
Msa0505360 AT5G05880.1 24.729 461 280 14 18 442 8 437 3.55e-27 114
Msa0505360 AT1G22370.1 27.362 307 193 9 167 454 11 306 4.19e-27 111
Msa0505360 AT5G05860.1 23.718 468 298 13 18 454 9 448 4.45e-27 113
Msa0505360 AT3G16520.2 28.667 300 182 9 115 392 116 405 7.09e-27 113
Msa0505360 AT3G16520.1 28.667 300 182 9 115 392 116 405 9.46e-27 112
Msa0505360 AT5G37950.2 27.586 290 192 5 93 371 63 345 5.36e-26 108
Msa0505360 AT5G37950.1 27.119 295 193 5 93 371 63 351 4.54e-25 106
Msa0505360 AT2G18560.1 28.720 289 160 9 183 442 94 365 9.43e-25 105
Msa0505360 AT3G22250.1 26.869 495 270 20 12 452 2 458 1.01e-24 107
Msa0505360 AT5G65550.1 22.439 410 271 12 18 393 9 405 1.11e-23 103
Msa0505360 AT5G17030.1 23.368 475 304 14 17 457 11 459 1.31e-23 103
Msa0505360 AT5G12890.1 22.541 488 312 18 18 454 10 482 9.34e-23 101
Msa0505360 AT5G17040.2 28.244 262 160 7 204 455 96 339 7.86e-22 96.7
Msa0505360 AT5G49690.1 26.077 441 278 19 18 429 10 431 8.71e-22 98.2
Msa0505360 AT1G06000.1 24.116 481 273 18 13 453 5 433 2.79e-21 96.7
Msa0505360 AT4G01070.2 25.312 320 197 10 18 313 8 309 6.94e-20 91.3
Msa0505360 AT2G22590.1 23.041 434 245 17 15 392 12 412 1.96e-15 79.0
Msa0505360 AT1G50580.1 21.510 437 294 14 18 429 6 418 3.34e-15 78.2
Msa0505360 AT5G53990.1 24.797 246 156 6 195 429 190 417 3.58e-15 78.2
Msa0505360 AT1G64910.1 21.101 436 296 14 18 429 6 417 1.03e-14 76.6
Msa0505360 AT5G54010.1 20.495 444 283 15 18 423 6 417 3.02e-13 72.0
Msa0505360 AT4G34135.2 24.691 324 204 12 18 309 11 326 4.54e-13 70.9
Msa0505360 AT3G29630.1 21.315 441 292 16 18 429 6 420 5.64e-13 71.2
Msa0505360 AT2G22930.1 21.149 435 297 12 18 429 6 417 7.35e-13 70.9
Msa0505360 AT3G29630.2 24.859 177 121 3 264 429 219 394 2.28e-12 69.3
Msa0505360 AT1G64920.1 20.988 243 165 6 202 429 191 421 1.95e-11 66.2

Find 127 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTGTTGGTGACAAATTTA+TGG 0.179993 3_4:+50809164 Msa0505360:CDS
ATAGTTCATATTATAAATTT+AGG 0.181823 3_4:+50814517 Msa0505360:three_prime_UTR
GTTTGGACCAATTGAGTAAA+TGG 0.196898 3_4:-50813611 None:intergenic
ATCCTTCTATAGGTGGTTAT+TGG 0.200123 3_4:+50813929 Msa0505360:CDS
GAAACATATGTGTGGGAAAA+TGG 0.209304 3_4:+50813864 Msa0505360:CDS
TTTAACATTTCCACTTGTTT+TGG 0.212969 3_4:+50814005 Msa0505360:CDS
ATAGTTGAGGATTGGAAAAT+TGG 0.213823 3_4:+50814051 Msa0505360:CDS
ATGGCTCATGGTTAAGGTTT+TGG 0.215318 3_4:-50808965 None:intergenic
ATTATATTCCATCAAATTCT+TGG 0.221396 3_4:+50813422 Msa0505360:CDS
GCTTCCGTTGTAAGAAAATA+TGG 0.243206 3_4:-50809386 None:intergenic
AAACTCCATGGTAATGAAAT+TGG 0.268839 3_4:-50808920 None:intergenic
AATCTTATGTTGTCGGGTTT+TGG 0.270941 3_4:-50809126 None:intergenic
GATAAAGAAATTCATGGATT+TGG 0.273650 3_4:+50814137 Msa0505360:CDS
TTCTTACAACGGAAGCATTT+AGG 0.281165 3_4:+50809393 Msa0505360:CDS
AACATACCTTACTTTAATCT+TGG 0.291719 3_4:+50813631 Msa0505360:CDS
TCTCTAAATGCTACTAATAA+TGG 0.298126 3_4:+50813667 Msa0505360:CDS
TTTGCAATCATCAAACTCTA+TGG 0.302150 3_4:+50814453 Msa0505360:three_prime_UTR
TAGTTCATATTATAAATTTA+GGG 0.313717 3_4:+50814518 Msa0505360:three_prime_UTR
ATATTCCGGTGGCTGCGTTC+TGG 0.321377 3_4:+50809328 Msa0505360:CDS
GGGTTTATGTGTCCTCTTGA+TGG 0.348822 3_4:-50809006 None:intergenic
ACAATTCCCATTTACTCAAT+TGG 0.354488 3_4:+50813604 Msa0505360:CDS
TGTGTTGATAAAGAAATTCA+TGG 0.355843 3_4:+50814131 Msa0505360:CDS
AATTGGGTGGAGAGTGAAAA+AGG 0.360423 3_4:+50814068 Msa0505360:CDS
ATGAATGGTGATGGTAGTTT+TGG 0.362235 3_4:-50808887 None:intergenic
TAAAACATGGCTCATGGTTA+AGG 0.365521 3_4:-50808971 None:intergenic
ACTATAATCTTACTAATTAG+TGG 0.365916 3_4:-50814033 None:intergenic
TAGCCAATCTATGTAACTTT+GGG 0.380094 3_4:-50813695 None:intergenic
GGACGATAAGTTTGATACTT+TGG 0.381107 3_4:+50814089 Msa0505360:CDS
TTCAACCTTTAGATGTTGAT+AGG 0.382743 3_4:+50814494 Msa0505360:three_prime_UTR
TTAGCCAATCTATGTAACTT+TGG 0.384177 3_4:-50813696 None:intergenic
ATGATAAATGTTGGCGGCCG+CGG 0.385441 3_4:-50809258 None:intergenic
AGATTAAAGTAAGGTATGTT+TGG 0.391403 3_4:-50813628 None:intergenic
AAACATATGTGTGGGAAAAT+GGG 0.397297 3_4:+50813865 Msa0505360:CDS
AATTTGTCACCAACAACGTT+AGG 0.407585 3_4:-50809159 None:intergenic
GTTTCAAATCTTATGTTGTC+GGG 0.421152 3_4:-50809132 None:intergenic
ATGTGTCCTCTTGATGGGTA+TGG 0.425804 3_4:-50809000 None:intergenic
TAGTTGAGGATTGGAAAATT+GGG 0.428547 3_4:+50814052 Msa0505360:CDS
AACTTGCTGAAATTCATCAT+AGG 0.432339 3_4:-50809027 None:intergenic
GGGCAGTTCGTGTTGGAAAC+CGG 0.432940 3_4:+50809301 Msa0505360:CDS
CTGCCCAAAGTTACATAGAT+TGG 0.433234 3_4:+50813692 Msa0505360:CDS
GAGACCATTGCAAAATTTGT+TGG 0.438810 3_4:-50813483 None:intergenic
GTAAGATTATAGTTGAGGAT+TGG 0.440487 3_4:+50814043 Msa0505360:CDS
GAAACCATCCCTAACGTTGT+TGG 0.440966 3_4:+50809150 Msa0505360:CDS
GTATTGTTACATCCTTCTAT+AGG 0.443856 3_4:+50813919 Msa0505360:CDS
AGATGAATCCAAGAATTTGA+TGG 0.446840 3_4:-50813430 None:intergenic
ATCGGTTTCAAGAACACAAA+TGG 0.451220 3_4:+50813768 Msa0505360:CDS
GATGTAACAATACCCTCAAT+TGG 0.455788 3_4:-50813909 None:intergenic
TTTGGACCAATTGAGTAAAT+GGG 0.456999 3_4:-50813610 None:intergenic
TGGAAACCGGAGGAATATTC+CGG 0.460893 3_4:+50809314 Msa0505360:CDS
GGTTTCAAATCTTATGTTGT+CGG 0.462618 3_4:-50809133 None:intergenic
GTCCAATAACCACCTATAGA+AGG 0.466360 3_4:-50813931 None:intergenic
TCATCAAACTCTATGGTTGT+TGG 0.467261 3_4:+50814460 Msa0505360:three_prime_UTR
GGTTTATGTGTCCTCTTGAT+GGG 0.474121 3_4:-50809005 None:intergenic
AGACAAGACATTCATTGTAC+TGG 0.477926 3_4:+50808792 None:intergenic
TGAAGCTGTTATGACTGAAA+TGG 0.482629 3_4:+50809194 Msa0505360:CDS
AGAGGGTACACCGTTGGATC+GGG 0.484014 3_4:-50814554 None:intergenic
ACTTGCTGAAATTCATCATA+GGG 0.484389 3_4:-50809026 None:intergenic
GGTCTCTCAAAAGTTGTCAA+TGG 0.491098 3_4:+50813500 Msa0505360:CDS
ACGAAGGTTACAAGGATGTT+GGG 0.492649 3_4:-50809066 None:intergenic
GCCATATGAAATGTACAAAA+CGG 0.493029 3_4:-50813737 None:intergenic
AACTCTATGGTTGTTGGTGT+CGG 0.496128 3_4:+50814466 Msa0505360:three_prime_UTR
TTCATATGGCAGTTATCTAT+CGG 0.502988 3_4:+50813750 Msa0505360:CDS
ATTTGTCACCAACAACGTTA+GGG 0.503117 3_4:-50809158 None:intergenic
AACGAAGGTTACAAGGATGT+TGG 0.503692 3_4:-50809067 None:intergenic
CGTTCGAGCGGTTACTAGAT+CGG 0.504795 3_4:+50809223 Msa0505360:CDS
TTGACACATGAAGCATCAAA+TGG 0.506314 3_4:+50814291 Msa0505360:CDS
AAGAGGGTACACCGTTGGAT+CGG 0.507591 3_4:-50814555 None:intergenic
TCCTTCCAATTTCATTACCA+TGG 0.516430 3_4:+50808915 Msa0505360:exon
ACTATCCTATCAACATCTAA+AGG 0.517230 3_4:-50814499 None:intergenic
CATTGCAAGATAGTGGTGTT+CGG 0.518164 3_4:+50813806 Msa0505360:CDS
TAGTGGTGTTCGGTTCTTGT+GGG 0.520278 3_4:+50813816 Msa0505360:CDS
AATTAGTAAGATTATAGTTG+AGG 0.523664 3_4:+50814038 Msa0505360:CDS
CATCGTCCACGTCCAAGCTG+TGG 0.527563 3_4:+50809352 Msa0505360:CDS
CAGCCACCGGAATATTCCTC+CGG 0.528894 3_4:-50809320 None:intergenic
TTGAAGAATATAATGGAGAG+TGG 0.537157 3_4:+50814267 Msa0505360:CDS
CCTTCGTTGTCACACAAGAA+TGG 0.538411 3_4:+50809082 Msa0505360:CDS
GTGTGACAACGAAGGTTACA+AGG 0.541387 3_4:-50809074 None:intergenic
AAAATAAGAGGGTACACCGT+TGG 0.542121 3_4:-50814560 None:intergenic
TGACATGGTGTGACCAATTG+AGG 0.544676 3_4:+50813896 Msa0505360:CDS
AATGTACAAAACGGAACCAT+GGG 0.545806 3_4:-50813728 None:intergenic
TGTCAACTAGCAATAAAGAA+AGG 0.546800 3_4:+50814213 Msa0505360:CDS
TTGTTACATCCTTCTATAGG+TGG 0.549356 3_4:+50813922 Msa0505360:CDS
GTTATTGGACACATTGTGGT+TGG 0.552161 3_4:+50813944 Msa0505360:CDS
TTGAGGATTGGAAAATTGGG+TGG 0.553176 3_4:+50814055 Msa0505360:CDS
ATAGTGGTGTTCGGTTCTTG+TGG 0.554324 3_4:+50813815 Msa0505360:CDS
TTTAAGGCATCAATTACTTG+AGG 0.558300 3_4:-50813571 None:intergenic
TTATCGCAGATGATAAATGT+TGG 0.559937 3_4:-50809267 None:intergenic
GGTTGGAATTCCGTTATTGA+AGG 0.560659 3_4:+50813961 Msa0505360:CDS
TTGTGTCCAAGATTAAAGTA+AGG 0.561566 3_4:-50813637 None:intergenic
TTGCACCCACAGCTTGGACG+TGG 0.562454 3_4:-50809358 None:intergenic
ATCTTGAAGTTGAAACTCCA+TGG 0.565499 3_4:-50808932 None:intergenic
GTCTAATAGACCCGATCCAA+CGG 0.566625 3_4:+50814544 Msa0505360:three_prime_UTR
GCATCTGCATTGCAAGATAG+TGG 0.568177 3_4:+50813799 Msa0505360:CDS
GGTTCAAGCTCATAAATTGA+AGG 0.569825 3_4:-50813550 None:intergenic
GATGTCCAGAACGCAGCCAC+CGG 0.571674 3_4:-50809333 None:intergenic
ATTGGAAGGAAACAAATGAA+TGG 0.571995 3_4:-50808902 None:intergenic
ATCGTCCACGTCCAAGCTGT+GGG 0.573032 3_4:+50809353 Msa0505360:CDS
AAATGGGGTTTGTTGTGACA+TGG 0.574943 3_4:+50813881 Msa0505360:CDS
TCATATTATAAATTTAGGGA+TGG 0.575685 3_4:+50814522 Msa0505360:three_prime_UTR
GTCACCAACAACGTTAGGGA+TGG 0.576761 3_4:-50809154 None:intergenic
TGAATTTGTGTATGAATGTG+TGG 0.582541 3_4:-50808843 None:intergenic
TGGTTGTTCTTATCAAGAAG+AGG 0.583294 3_4:-50813463 None:intergenic
ATAGATTGAAACATATGTGT+GGG 0.584985 3_4:+50813857 Msa0505360:CDS
AAATGGAAGCACCGTTCGAG+CGG 0.585082 3_4:+50809211 Msa0505360:CDS
AAATGTACAAAACGGAACCA+TGG 0.586510 3_4:-50813729 None:intergenic
AACATATGTGTGGGAAAATG+GGG 0.586799 3_4:+50813866 Msa0505360:CDS
CGATCTAGTAACCGCTCGAA+CGG 0.593977 3_4:-50809222 None:intergenic
AACCACTAAAACATGGCTCA+TGG 0.599867 3_4:-50808977 None:intergenic
TCCATGGTAATGAAATTGGA+AGG 0.601716 3_4:-50808916 None:intergenic
ACAAAACGGAACCATGGGGT+TGG 0.607579 3_4:-50813723 None:intergenic
GTGGTTCCATACCCATCAAG+AGG 0.610985 3_4:+50808994 Msa0505360:CDS
AATAGATTGAAACATATGTG+TGG 0.615244 3_4:+50813856 Msa0505360:CDS
AGTGGTTGATCCAAAACAAG+TGG 0.615823 3_4:-50814015 None:intergenic
CAACTAGCAATAAAGAAAGG+TGG 0.616518 3_4:+50814216 Msa0505360:CDS
GACATGGTGTGACCAATTGA+GGG 0.622606 3_4:+50813897 Msa0505360:CDS
TCGCAGATGATAAATGTTGG+CGG 0.628579 3_4:-50809264 None:intergenic
TTTCTAGTACAATGAATGTG+TGG 0.631751 3_4:-50808819 None:intergenic
GGTGGTTATTGGACACATTG+TGG 0.638646 3_4:+50813940 Msa0505360:CDS
CCATTCTTGTGTGACAACGA+AGG 0.643133 3_4:-50809082 None:intergenic
TGGCTAAATCTCCAACCCCA+TGG 0.645076 3_4:+50813712 Msa0505360:CDS
AGGAAACAAATGAATGGTGA+TGG 0.645302 3_4:-50808896 None:intergenic
ATCGGCTTGTACTTCAGCCG+CGG 0.674814 3_4:+50809241 Msa0505360:CDS
GGTATGGAACCACTAAAACA+TGG 0.678117 3_4:-50808984 None:intergenic
CAGTTCGTGTTGGAAACCGG+AGG 0.682058 3_4:+50809304 Msa0505360:CDS
AAACCGGAGGAATATTCCGG+TGG 0.703022 3_4:+50809317 Msa0505360:CDS
ATGGCTAACCCTAATAAACG+TGG 0.703509 3_4:+50809101 Msa0505360:CDS
ATGTACAAAACGGAACCATG+GGG 0.736762 3_4:-50813727 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAATTAATTTATAATT+AGG - chr3_4:50812514-50812533 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTTTTTTA+AGG - chr3_4:50812864-50812883 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTAAGGAA+GGG - chr3_4:50810566-50810585 None:intergenic 10.0%
!!! TAGTGTTTTTTTTTTTTTTA+AGG - chr3_4:50810571-50810590 None:intergenic 10.0%
!! TGTAAGAAAAAAAATATTTA+AGG - chr3_4:50810608-50810627 None:intergenic 10.0%
!! ATATATATATATATATAGAG+GGG + chr3_4:50811137-50811156 Msa0505360:intron 10.0%
!! AGTATATACATTTATATTTA+AGG - chr3_4:50811294-50811313 None:intergenic 10.0%
!!! CTTTTTTTATTGATAAAAAA+GGG - chr3_4:50812063-50812082 None:intergenic 10.0%
!!! TCTTTTTTTATTGATAAAAA+AGG - chr3_4:50812064-50812083 None:intergenic 10.0%
!! AATGTTTGTAAAAAAAAAAA+AGG + chr3_4:50812717-50812736 Msa0505360:intron 10.0%
!! ATAGTTCATATTATAAATTT+AGG + chr3_4:50814517-50814536 Msa0505360:three_prime_UTR 10.0%
!! TAGTTCATATTATAAATTTA+GGG + chr3_4:50814518-50814537 Msa0505360:three_prime_UTR 10.0%
!! TAAAAATGTCAAAACTAATT+TGG - chr3_4:50809654-50809673 None:intergenic 15.0%
!! ACTAATATCAAATATTTATG+AGG + chr3_4:50809833-50809852 Msa0505360:intron 15.0%
!!! TCGATTAATTAATATCATTT+TGG - chr3_4:50809873-50809892 None:intergenic 15.0%
!!! ACTTATCATGTTTAATTTAA+TGG - chr3_4:50810067-50810086 None:intergenic 15.0%
!!! ATATCACTAATTATTTTTGT+TGG - chr3_4:50810455-50810474 None:intergenic 15.0%
!!! GTTTTTTTTTTTTTTAAGGA+AGG - chr3_4:50810567-50810586 None:intergenic 15.0%
!!! AATTTTATCATATTATTCGT+AGG - chr3_4:50810813-50810832 None:intergenic 15.0%
!! ATAAATTCAATCAATGATTT+GGG - chr3_4:50810880-50810899 None:intergenic 15.0%
!! TATAAATTCAATCAATGATT+TGG - chr3_4:50810881-50810900 None:intergenic 15.0%
!!! AAAAAATGTGATTTTAAGTA+AGG + chr3_4:50811401-50811420 Msa0505360:intron 15.0%
!! AAATATACATGATATTTGTT+AGG - chr3_4:50812154-50812173 None:intergenic 15.0%
!! TTATTATCTCCTTTAATATT+TGG + chr3_4:50812269-50812288 Msa0505360:intron 15.0%
!! TATTATCTCCTTTAATATTT+GGG + chr3_4:50812270-50812289 Msa0505360:intron 15.0%
!! AAGATCTTAACAAAATTTAT+AGG - chr3_4:50812329-50812348 None:intergenic 15.0%
!!! AATTTTGTTAAGATCTTTTA+AGG + chr3_4:50812332-50812351 Msa0505360:intron 15.0%
!!! ATTTTGTTAAGATCTTTTAA+GGG + chr3_4:50812333-50812352 Msa0505360:intron 15.0%
!! TTACAAAAGTAAATAGTAAA+CGG + chr3_4:50812691-50812710 Msa0505360:intron 15.0%
!!! TTTTCCATATTTTCTTACAA+CGG + chr3_4:50809382-50809401 Msa0505360:CDS 20.0%
!! TCTGACTTATAAAAATAAAG+AGG + chr3_4:50809689-50809708 Msa0505360:intron 20.0%
!! TATTAATTAATCGAAAACCA+AGG + chr3_4:50809879-50809898 Msa0505360:intron 20.0%
!!! TGTAGTTTTCAAAAACTTTT+GGG - chr3_4:50810506-50810525 None:intergenic 20.0%
!! AATATTTAAGGAAATTTCCA+CGG - chr3_4:50810596-50810615 None:intergenic 20.0%
!! TCAATTTGAATGAATGAATA+TGG - chr3_4:50810640-50810659 None:intergenic 20.0%
!!! AACATGTGTCATATTTTTAT+TGG - chr3_4:50811371-50811390 None:intergenic 20.0%
!!! ATGAGATGTTTGATTTTAAT+TGG + chr3_4:50811541-50811560 Msa0505360:intron 20.0%
!!! ATGTTTGATTTTAATTGGTT+GGG + chr3_4:50811546-50811565 Msa0505360:intron 20.0%
!!! TTGCAATATCTATTTTGAAA+CGG - chr3_4:50811780-50811799 None:intergenic 20.0%
!!! GATATCTATTTTGAAATAGA+GGG + chr3_4:50812005-50812024 Msa0505360:intron 20.0%
!!! TTTTTTTGTCTGTGTATTTA+TGG + chr3_4:50812183-50812202 Msa0505360:intron 20.0%
!! TGTGTATTTATGGTAAAAAA+GGG + chr3_4:50812193-50812212 Msa0505360:intron 20.0%
!! TCTTAACAAAATTTATAGGA+AGG - chr3_4:50812325-50812344 None:intergenic 20.0%
!! TTGAAAACTAAAGGTTTAAT+TGG - chr3_4:50812429-50812448 None:intergenic 20.0%
!!! TTTGCATTTTTTAATTTGTG+TGG - chr3_4:50812568-50812587 None:intergenic 20.0%
!! AAAAAAAAACAAGACACTTA+AGG + chr3_4:50812884-50812903 Msa0505360:intron 20.0%
!! TAATTAGGAATAATATTCCA+AGG - chr3_4:50813234-50813253 None:intergenic 20.0%
!! TTAGAAATGACATTCTAATT+AGG - chr3_4:50813249-50813268 None:intergenic 20.0%
!! ATTATATTCCATCAAATTCT+TGG + chr3_4:50813422-50813441 Msa0505360:CDS 20.0%
!! ACTATAATCTTACTAATTAG+TGG - chr3_4:50814036-50814055 None:intergenic 20.0%
!! AATTAGTAAGATTATAGTTG+AGG + chr3_4:50814038-50814057 Msa0505360:CDS 20.0%
!!! AGCATTTTTGAAGAATATAA+TGG + chr3_4:50814260-50814279 Msa0505360:CDS 20.0%
!! TCATATTATAAATTTAGGGA+TGG + chr3_4:50814522-50814541 Msa0505360:three_prime_UTR 20.0%
!! CTTTGATTATTTCTTGACAA+AGG - chr3_4:50809450-50809469 None:intergenic 25.0%
!!! TTTGAGTATTAGTTTTTGTC+TGG + chr3_4:50809748-50809767 Msa0505360:intron 25.0%
! AAACTTTGTCTATGTATTTC+TGG - chr3_4:50809924-50809943 None:intergenic 25.0%
!! TAGTTTTCAAAAACTTTTGG+GGG - chr3_4:50810504-50810523 None:intergenic 25.0%
!! GTAGTTTTCAAAAACTTTTG+GGG - chr3_4:50810505-50810524 None:intergenic 25.0%
!! GTGTAGTTTTCAAAAACTTT+TGG - chr3_4:50810507-50810526 None:intergenic 25.0%
! AAACATCACTAAAAACGTAA+AGG + chr3_4:50810734-50810753 Msa0505360:intron 25.0%
! ATTAATGTCGATCTTTCAAT+AGG + chr3_4:50810905-50810924 Msa0505360:intron 25.0%
! TTTCTTTCAGTCTAAATAAG+TGG - chr3_4:50811053-50811072 None:intergenic 25.0%
!!! GTGTCATATTTTTATTGGTT+GGG - chr3_4:50811366-50811385 None:intergenic 25.0%
!!! TGTGTCATATTTTTATTGGT+TGG - chr3_4:50811367-50811386 None:intergenic 25.0%
!!! TGTGATTTTAAGTAAGGAAA+TGG + chr3_4:50811407-50811426 Msa0505360:intron 25.0%
! TAAGGAAATGGAAACATAAA+TGG + chr3_4:50811419-50811438 Msa0505360:intron 25.0%
!!! TTTTTGTTGGTTAAAGAAAG+TGG + chr3_4:50811452-50811471 Msa0505360:intron 25.0%
!!! GATGTTTGATTTTAATTGGT+TGG + chr3_4:50811545-50811564 Msa0505360:intron 25.0%
!!! TCTACTTTTAATCAATCAGA+TGG + chr3_4:50811611-50811630 Msa0505360:intron 25.0%
! TATTGTCTCTTCGAAAAAAT+AGG + chr3_4:50811702-50811721 Msa0505360:intron 25.0%
! ATTGTCTCTTCGAAAAAATA+GGG + chr3_4:50811703-50811722 Msa0505360:intron 25.0%
!!! AATATCTATTTTGAAACGGA+TGG - chr3_4:50811776-50811795 None:intergenic 25.0%
!!! CGATATCTATTTTGAAATAG+AGG + chr3_4:50812004-50812023 Msa0505360:intron 25.0%
! CTGTGTATTTATGGTAAAAA+AGG + chr3_4:50812192-50812211 Msa0505360:intron 25.0%
! TAAGTCATCCCAAATATTAA+AGG - chr3_4:50812281-50812300 None:intergenic 25.0%
!!! TAGTCTTGTTTGAAAACTAA+AGG - chr3_4:50812438-50812457 None:intergenic 25.0%
!!! CTATTTTAGATCGATATACA+TGG + chr3_4:50812455-50812474 Msa0505360:intron 25.0%
! TCACTATCATATTTAAGTCT+AGG + chr3_4:50812483-50812502 Msa0505360:intron 25.0%
! TATCATATTTAAGTCTAGGA+GGG + chr3_4:50812487-50812506 Msa0505360:intron 25.0%
! CATGTGTAAATAACATTTCT+GGG - chr3_4:50813020-50813039 None:intergenic 25.0%
! ACATGTGTAAATAACATTTC+TGG - chr3_4:50813021-50813040 None:intergenic 25.0%
!!! GTAATTTCTAAAACATTCTC+TGG + chr3_4:50813165-50813184 Msa0505360:intron 25.0%
!! AAATTTTTACCAAACACACA+TGG + chr3_4:50813194-50813213 Msa0505360:intron 25.0%
!! AATTTTTACCAAACACACAT+GGG + chr3_4:50813195-50813214 Msa0505360:intron 25.0%
!!! AATTGTGAGCTTTGATTTTA+AGG - chr3_4:50813590-50813609 None:intergenic 25.0%
! AGATTAAAGTAAGGTATGTT+TGG - chr3_4:50813631-50813650 None:intergenic 25.0%
! AACATACCTTACTTTAATCT+TGG + chr3_4:50813631-50813650 Msa0505360:CDS 25.0%
! TCTCTAAATGCTACTAATAA+TGG + chr3_4:50813667-50813686 Msa0505360:CDS 25.0%
! AATAGATTGAAACATATGTG+TGG + chr3_4:50813856-50813875 Msa0505360:CDS 25.0%
! ATAGATTGAAACATATGTGT+GGG + chr3_4:50813857-50813876 Msa0505360:CDS 25.0%
! AGAAAAAACACCTTCAATAA+CGG - chr3_4:50813974-50813993 None:intergenic 25.0%
!!! TTATTGAAGGTGTTTTTTCT+GGG + chr3_4:50813974-50813993 Msa0505360:CDS 25.0%
! ACAAGTGGAAATGTTAAAAA+AGG - chr3_4:50814003-50814022 None:intergenic 25.0%
!! TTTAACATTTCCACTTGTTT+TGG + chr3_4:50814005-50814024 Msa0505360:CDS 25.0%
!! TGTGTTGATAAAGAAATTCA+TGG + chr3_4:50814131-50814150 Msa0505360:CDS 25.0%
! GATAAAGAAATTCATGGATT+TGG + chr3_4:50814137-50814156 Msa0505360:CDS 25.0%
!!! ATGGATTTGGATTTTGATTT+AGG + chr3_4:50814150-50814169 Msa0505360:CDS 25.0%
!!! ATTTGGATTTTGATTTAGGA+AGG + chr3_4:50814154-50814173 Msa0505360:CDS 25.0%
!!! TTTGGATTTTGATTTAGGAA+GGG + chr3_4:50814155-50814174 Msa0505360:CDS 25.0%
! TTTCTAGTACAATGAATGTG+TGG - chr3_4:50808822-50808841 None:intergenic 30.0%
TGAATTTGTGTATGAATGTG+TGG - chr3_4:50808846-50808865 None:intergenic 30.0%
!!! AGTTTTGGTTTTGTGTAGTA+AGG - chr3_4:50808875-50808894 None:intergenic 30.0%
ATTGGAAGGAAACAAATGAA+TGG - chr3_4:50808905-50808924 None:intergenic 30.0%
! AAACTCCATGGTAATGAAAT+TGG - chr3_4:50808923-50808942 None:intergenic 30.0%
! ACTTGCTGAAATTCATCATA+GGG - chr3_4:50809029-50809048 None:intergenic 30.0%
!! AACTTGCTGAAATTCATCAT+AGG - chr3_4:50809030-50809049 None:intergenic 30.0%
!!! TTTTGGTTCCACGTTTATTA+GGG - chr3_4:50809112-50809131 None:intergenic 30.0%
GTTTCAAATCTTATGTTGTC+GGG - chr3_4:50809135-50809154 None:intergenic 30.0%
GGTTTCAAATCTTATGTTGT+CGG - chr3_4:50809136-50809155 None:intergenic 30.0%
TTATCGCAGATGATAAATGT+TGG - chr3_4:50809270-50809289 None:intergenic 30.0%
! TCTGCGATAATTTTCTCTTT+TGG + chr3_4:50809280-50809299 Msa0505360:CDS 30.0%
! CTGCGATAATTTTCTCTTTT+GGG + chr3_4:50809281-50809300 Msa0505360:CDS 30.0%
TAAATTCTCTTGATGTGCTT+GGG - chr3_4:50810043-50810062 None:intergenic 30.0%
AAAAAAAAAACACTAAGCCG+TGG + chr3_4:50810576-50810595 Msa0505360:intron 30.0%
! CATATTATTCGTAGGCATTT+TGG - chr3_4:50810805-50810824 None:intergenic 30.0%
TTTAGACTGAAAGAAAAGAG+AGG + chr3_4:50811057-50811076 Msa0505360:intron 30.0%
TTAGACTGAAAGAAAAGAGA+GGG + chr3_4:50811058-50811077 Msa0505360:intron 30.0%
TTTCTCCCACTAAAAAATCA+AGG + chr3_4:50811241-50811260 Msa0505360:intron 30.0%
TTGGTTAAAGAAAGTGGAAA+AGG + chr3_4:50811458-50811477 Msa0505360:intron 30.0%
CAGATGGTGATACAAATAAT+CGG + chr3_4:50811627-50811646 Msa0505360:intron 30.0%
! ATTTTTGTCCCAGATATCAA+CGG + chr3_4:50811669-50811688 Msa0505360:intron 30.0%
TAGTGATCAAAGTTGTGTAT+TGG + chr3_4:50811956-50811975 Msa0505360:intron 30.0%
TGACTTACCTAAAATTAGAC+AGG + chr3_4:50812294-50812313 Msa0505360:intron 30.0%
GACTTACCTAAAATTAGACA+GGG + chr3_4:50812295-50812314 Msa0505360:intron 30.0%
!! GTTAAGATCTTTTAAGGGTT+TGG + chr3_4:50812338-50812357 Msa0505360:intron 30.0%
AAAAGATAGCAACAAATGAG+GGG - chr3_4:50812377-50812396 None:intergenic 30.0%
CAAAAGATAGCAACAAATGA+GGG - chr3_4:50812378-50812397 None:intergenic 30.0%
GTTGACAAGTACCTAAATTT+GGG - chr3_4:50812407-50812426 None:intergenic 30.0%
CTATCATATTTAAGTCTAGG+AGG + chr3_4:50812486-50812505 Msa0505360:intron 30.0%
AAGGTTTGTAATATGATTCC+TGG + chr3_4:50812919-50812938 Msa0505360:intron 30.0%
AGGTTTGTAATATGATTCCT+GGG + chr3_4:50812920-50812939 Msa0505360:intron 30.0%
! ATTGTTATTCGCATGCTTAA+AGG + chr3_4:50813048-50813067 Msa0505360:intron 30.0%
AAAAAGGAAACAAATGTGAG+TGG - chr3_4:50813130-50813149 None:intergenic 30.0%
!! AAACAAACACACCCTTATTT+TGG + chr3_4:50813286-50813305 Msa0505360:intron 30.0%
! ATTCTTTGTTATGCAGAAGA+TGG + chr3_4:50813385-50813404 Msa0505360:intron 30.0%
AGATGAATCCAAGAATTTGA+TGG - chr3_4:50813433-50813452 None:intergenic 30.0%
! ACAACCAACAAATTTTGCAA+TGG + chr3_4:50813479-50813498 Msa0505360:CDS 30.0%
! TTTAAGGCATCAATTACTTG+AGG - chr3_4:50813574-50813593 None:intergenic 30.0%
ACAATTCCCATTTACTCAAT+TGG + chr3_4:50813604-50813623 Msa0505360:CDS 30.0%
TTTGGACCAATTGAGTAAAT+GGG - chr3_4:50813613-50813632 None:intergenic 30.0%
TTGTGTCCAAGATTAAAGTA+AGG - chr3_4:50813640-50813659 None:intergenic 30.0%
TAGCCAATCTATGTAACTTT+GGG - chr3_4:50813698-50813717 None:intergenic 30.0%
TTAGCCAATCTATGTAACTT+TGG - chr3_4:50813699-50813718 None:intergenic 30.0%
! TCCGTTTTGTACATTTCATA+TGG + chr3_4:50813736-50813755 Msa0505360:CDS 30.0%
GCCATATGAAATGTACAAAA+CGG - chr3_4:50813740-50813759 None:intergenic 30.0%
TTCATATGGCAGTTATCTAT+CGG + chr3_4:50813750-50813769 Msa0505360:CDS 30.0%
AAACATATGTGTGGGAAAAT+GGG + chr3_4:50813865-50813884 Msa0505360:CDS 30.0%
GTATTGTTACATCCTTCTAT+AGG + chr3_4:50813919-50813938 Msa0505360:CDS 30.0%
!!! GTTATTGAAGGTGTTTTTTC+TGG + chr3_4:50813973-50813992 Msa0505360:CDS 30.0%
!!! TATTGAAGGTGTTTTTTCTG+GGG + chr3_4:50813975-50813994 Msa0505360:CDS 30.0%
GTAAGATTATAGTTGAGGAT+TGG + chr3_4:50814043-50814062 Msa0505360:CDS 30.0%
ATAGTTGAGGATTGGAAAAT+TGG + chr3_4:50814051-50814070 Msa0505360:CDS 30.0%
TAGTTGAGGATTGGAAAATT+GGG + chr3_4:50814052-50814071 Msa0505360:CDS 30.0%
TGTCAACTAGCAATAAAGAA+AGG + chr3_4:50814213-50814232 Msa0505360:CDS 30.0%
! TTGAAGAATATAATGGAGAG+TGG + chr3_4:50814267-50814286 Msa0505360:CDS 30.0%
! TTTTGTCATGCTTAGTTGTT+TGG + chr3_4:50814371-50814390 Msa0505360:three_prime_UTR 30.0%
TTTGCAATCATCAAACTCTA+TGG + chr3_4:50814453-50814472 Msa0505360:three_prime_UTR 30.0%
TTCAACCTTTAGATGTTGAT+AGG + chr3_4:50814494-50814513 Msa0505360:three_prime_UTR 30.0%
ACTATCCTATCAACATCTAA+AGG - chr3_4:50814502-50814521 None:intergenic 30.0%
!!! ATGAATGGTGATGGTAGTTT+TGG - chr3_4:50808890-50808909 None:intergenic 35.0%
AGGAAACAAATGAATGGTGA+TGG - chr3_4:50808899-50808918 None:intergenic 35.0%
TCCTTCCAATTTCATTACCA+TGG + chr3_4:50808915-50808934 Msa0505360:exon 35.0%
! TCCATGGTAATGAAATTGGA+AGG - chr3_4:50808919-50808938 None:intergenic 35.0%
ATCTTGAAGTTGAAACTCCA+TGG - chr3_4:50808935-50808954 None:intergenic 35.0%
!!! GTTAAGGTTTTGGGTGATTT+TGG - chr3_4:50808958-50808977 None:intergenic 35.0%
TAAAACATGGCTCATGGTTA+AGG - chr3_4:50808974-50808993 None:intergenic 35.0%
!!! GTTTTGGTTCCACGTTTATT+AGG - chr3_4:50809113-50809132 None:intergenic 35.0%
! AATCTTATGTTGTCGGGTTT+TGG - chr3_4:50809129-50809148 None:intergenic 35.0%
ATTTGTCACCAACAACGTTA+GGG - chr3_4:50809161-50809180 None:intergenic 35.0%
AATTTGTCACCAACAACGTT+AGG - chr3_4:50809162-50809181 None:intergenic 35.0%
!! CGTTGTTGGTGACAAATTTA+TGG + chr3_4:50809164-50809183 Msa0505360:CDS 35.0%
TGAAGCTGTTATGACTGAAA+TGG + chr3_4:50809194-50809213 Msa0505360:CDS 35.0%
GCTTCCGTTGTAAGAAAATA+TGG - chr3_4:50809389-50809408 None:intergenic 35.0%
!! TTCTTACAACGGAAGCATTT+AGG + chr3_4:50809393-50809412 Msa0505360:CDS 35.0%
CTAAATTCTCTTGATGTGCT+TGG - chr3_4:50810044-50810063 None:intergenic 35.0%
TCAAGCTTTCAATGTTTCAG+TGG - chr3_4:50810122-50810141 None:intergenic 35.0%
ATAAAGGATCGTCAAACGAT+TGG + chr3_4:50810262-50810281 Msa0505360:intron 35.0%
TAAAGGATCGTCAAACGATT+GGG + chr3_4:50810263-50810282 Msa0505360:intron 35.0%
TTGGCGTATGCTATAAACTT+GGG - chr3_4:50810786-50810805 None:intergenic 35.0%
TTTGGCGTATGCTATAAACT+TGG - chr3_4:50810787-50810806 None:intergenic 35.0%
! TTTGATTTCGCGTCTTATTG+CGG - chr3_4:50810944-50810963 None:intergenic 35.0%
TAATTACAGCGTTGTGTTGT+TGG - chr3_4:50810982-50811001 None:intergenic 35.0%
! TTTTTCTCCTTCATTCATCG+AGG - chr3_4:50811200-50811219 None:intergenic 35.0%
AGTGAAAACTACGATATAGC+TGG - chr3_4:50811267-50811286 None:intergenic 35.0%
GGGTGTAAGAATAATCTCTT+AGG - chr3_4:50811566-50811585 None:intergenic 35.0%
GGAAATGGAAACATAAATGG+TGG + chr3_4:50811422-50811441 Msa0505360:intron 35.0%
AATGGAAACATAAATGGTGG+TGG + chr3_4:50811425-50811444 Msa0505360:intron 35.0%
ATGGAAACATAAATGGTGGT+GGG + chr3_4:50811426-50811445 Msa0505360:intron 35.0%
! TTTTTGTCCCAGATATCAAC+GGG + chr3_4:50811670-50811689 Msa0505360:intron 35.0%
!!! TTTTGAAACGGATGGAGTAT+CGG - chr3_4:50811768-50811787 None:intergenic 35.0%
TGTTGTACTTCTTGTGACAA+AGG - chr3_4:50812093-50812112 None:intergenic 35.0%
ACAACACGATGATATATGCA+TGG + chr3_4:50812107-50812126 Msa0505360:intron 35.0%
!! GATCTTTTAAGGGTTTGGTT+TGG + chr3_4:50812343-50812362 Msa0505360:intron 35.0%
AAAGATAGCAACAAATGAGG+GGG - chr3_4:50812376-50812395 None:intergenic 35.0%
CCAAAAGATAGCAACAAATG+AGG - chr3_4:50812379-50812398 None:intergenic 35.0%
!! CCTCATTTGTTGCTATCTTT+TGG + chr3_4:50812376-50812395 Msa0505360:intron 35.0%
! TTTTGGCACATCCCAAATTT+AGG + chr3_4:50812393-50812412 Msa0505360:intron 35.0%
GGTTGACAAGTACCTAAATT+TGG - chr3_4:50812408-50812427 None:intergenic 35.0%
CTTAAGGTGTGTTTGTTTCA+AGG + chr3_4:50812900-50812919 Msa0505360:intron 35.0%
ATTTACAATCTCACATTCCC+AGG - chr3_4:50812940-50812959 None:intergenic 35.0%
TTATTCGCATGCTTAAAGGA+TGG + chr3_4:50813052-50813071 Msa0505360:intron 35.0%
TATTCGCATGCTTAAAGGAT+GGG + chr3_4:50813053-50813072 Msa0505360:intron 35.0%
TGGGTATGAATGTTATTCCT+TGG + chr3_4:50813214-50813233 Msa0505360:intron 35.0%
! ATAAGGGTGTGTTTGTTTCA+AGG - chr3_4:50813284-50813303 None:intergenic 35.0%
AGCCATTCTAGCCAAAATAA+GGG - chr3_4:50813300-50813319 None:intergenic 35.0%
AAGCCATTCTAGCCAAAATA+AGG - chr3_4:50813301-50813320 None:intergenic 35.0%
TGGTTGTTCTTATCAAGAAG+AGG - chr3_4:50813466-50813485 None:intergenic 35.0%
GAGACCATTGCAAAATTTGT+TGG - chr3_4:50813486-50813505 None:intergenic 35.0%
GGTTCAAGCTCATAAATTGA+AGG - chr3_4:50813553-50813572 None:intergenic 35.0%
GTTTGGACCAATTGAGTAAA+TGG - chr3_4:50813614-50813633 None:intergenic 35.0%
AATGTACAAAACGGAACCAT+GGG - chr3_4:50813731-50813750 None:intergenic 35.0%
AAATGTACAAAACGGAACCA+TGG - chr3_4:50813732-50813751 None:intergenic 35.0%
! ATCGGTTTCAAGAACACAAA+TGG + chr3_4:50813768-50813787 Msa0505360:CDS 35.0%
GAAACATATGTGTGGGAAAA+TGG + chr3_4:50813864-50813883 Msa0505360:CDS 35.0%
AACATATGTGTGGGAAAATG+GGG + chr3_4:50813866-50813885 Msa0505360:CDS 35.0%
GATGTAACAATACCCTCAAT+TGG - chr3_4:50813912-50813931 None:intergenic 35.0%
TTGTTACATCCTTCTATAGG+TGG + chr3_4:50813922-50813941 Msa0505360:CDS 35.0%
ATCCTTCTATAGGTGGTTAT+TGG + chr3_4:50813929-50813948 Msa0505360:CDS 35.0%
GGACGATAAGTTTGATACTT+TGG + chr3_4:50814089-50814108 Msa0505360:CDS 35.0%
GGATTTGAGAAAAAGAGCAA+AGG + chr3_4:50814176-50814195 Msa0505360:CDS 35.0%
CAACTAGCAATAAAGAAAGG+TGG + chr3_4:50814216-50814235 Msa0505360:CDS 35.0%
! TTGACACATGAAGCATCAAA+TGG + chr3_4:50814291-50814310 Msa0505360:CDS 35.0%
TCATCAAACTCTATGGTTGT+TGG + chr3_4:50814460-50814479 Msa0505360:three_prime_UTR 35.0%
! TGGCTCATGGTTAAGGTTTT+GGG - chr3_4:50808967-50808986 None:intergenic 40.0%
! ATGGCTCATGGTTAAGGTTT+TGG - chr3_4:50808968-50808987 None:intergenic 40.0%
!! AACCATGAGCCATGTTTTAG+TGG + chr3_4:50808975-50808994 Msa0505360:CDS 40.0%
AACCACTAAAACATGGCTCA+TGG - chr3_4:50808980-50808999 None:intergenic 40.0%
GGTATGGAACCACTAAAACA+TGG - chr3_4:50808987-50809006 None:intergenic 40.0%
GGTTTATGTGTCCTCTTGAT+GGG - chr3_4:50809008-50809027 None:intergenic 40.0%
ACGAAGGTTACAAGGATGTT+GGG - chr3_4:50809069-50809088 None:intergenic 40.0%
AACGAAGGTTACAAGGATGT+TGG - chr3_4:50809070-50809089 None:intergenic 40.0%
ATGGCTAACCCTAATAAACG+TGG + chr3_4:50809101-50809120 Msa0505360:CDS 40.0%
TCGCAGATGATAAATGTTGG+CGG - chr3_4:50809267-50809286 None:intergenic 40.0%
!! ACAACGGAAGCATTTAGGTA+TGG + chr3_4:50809398-50809417 Msa0505360:intron 40.0%
!! CTTTTGGGGGAAGATAAGTA+AGG - chr3_4:50810491-50810510 None:intergenic 40.0%
TTAAGGAAGGGTTCAGTACA+TGG - chr3_4:50810554-50810573 None:intergenic 40.0%
! GCTATAAACTTGGGTGTTGT+GGG - chr3_4:50810777-50810796 None:intergenic 40.0%
! TGCTATAAACTTGGGTGTTG+TGG - chr3_4:50810778-50810797 None:intergenic 40.0%
!!! GCTGGCCTTGATTTTTTAGT+GGG - chr3_4:50811249-50811268 None:intergenic 40.0%
!!! AGCTGGCCTTGATTTTTTAG+TGG - chr3_4:50811250-50811269 None:intergenic 40.0%
! TTTTGTCCCAGATATCAACG+GGG + chr3_4:50811671-50811690 Msa0505360:intron 40.0%
! TTTGAAACGGATGGAGTATC+GGG - chr3_4:50811767-50811786 None:intergenic 40.0%
!! GGAACATGTTTTAGACGTAC+TGG - chr3_4:50812133-50812152 None:intergenic 40.0%
! GGAAGACCCTGTCTAATTTT+AGG - chr3_4:50812304-50812323 None:intergenic 40.0%
AAGATAGCAACAAATGAGGG+GGG - chr3_4:50812375-50812394 None:intergenic 40.0%
CATTCATACCCATGTGTGTT+TGG - chr3_4:50813206-50813225 None:intergenic 40.0%
!!! CACCCTTATTTTGGCTAGAA+TGG + chr3_4:50813295-50813314 Msa0505360:intron 40.0%
GCTAGAATGGCTTACGTTAT+AGG + chr3_4:50813308-50813327 Msa0505360:intron 40.0%
TGGCTTACGTTATAGGACAA+AGG + chr3_4:50813315-50813334 Msa0505360:intron 40.0%
GGCTTACGTTATAGGACAAA+GGG + chr3_4:50813316-50813335 Msa0505360:intron 40.0%
GGTCTCTCAAAAGTTGTCAA+TGG + chr3_4:50813500-50813519 Msa0505360:CDS 40.0%
CTGCCCAAAGTTACATAGAT+TGG + chr3_4:50813692-50813711 Msa0505360:CDS 40.0%
ATGTACAAAACGGAACCATG+GGG - chr3_4:50813730-50813749 None:intergenic 40.0%
! CATTGCAAGATAGTGGTGTT+CGG + chr3_4:50813806-50813825 Msa0505360:CDS 40.0%
!! AAATGGGGTTTGTTGTGACA+TGG + chr3_4:50813881-50813900 Msa0505360:CDS 40.0%
GTCCAATAACCACCTATAGA+AGG - chr3_4:50813934-50813953 None:intergenic 40.0%
GTTATTGGACACATTGTGGT+TGG + chr3_4:50813944-50813963 Msa0505360:CDS 40.0%
GGTTGGAATTCCGTTATTGA+AGG + chr3_4:50813961-50813980 Msa0505360:CDS 40.0%
AGTGGTTGATCCAAAACAAG+TGG - chr3_4:50814018-50814037 None:intergenic 40.0%
TTGAGGATTGGAAAATTGGG+TGG + chr3_4:50814055-50814074 Msa0505360:CDS 40.0%
AATTGGGTGGAGAGTGAAAA+AGG + chr3_4:50814068-50814087 Msa0505360:CDS 40.0%
AACTCTATGGTTGTTGGTGT+CGG + chr3_4:50814466-50814485 Msa0505360:three_prime_UTR 40.0%
! ATGTGTCCTCTTGATGGGTA+TGG - chr3_4:50809003-50809022 None:intergenic 45.0%
GGGTTTATGTGTCCTCTTGA+TGG - chr3_4:50809009-50809028 None:intergenic 45.0%
GTGTGACAACGAAGGTTACA+AGG - chr3_4:50809077-50809096 None:intergenic 45.0%
CCATTCTTGTGTGACAACGA+AGG - chr3_4:50809085-50809104 None:intergenic 45.0%
CCTTCGTTGTCACACAAGAA+TGG + chr3_4:50809082-50809101 Msa0505360:CDS 45.0%
GAAACCATCCCTAACGTTGT+TGG + chr3_4:50809150-50809169 Msa0505360:CDS 45.0%
TGGAAACCGGAGGAATATTC+CGG + chr3_4:50809314-50809333 Msa0505360:CDS 45.0%
GAAAAATTGCACCCACAGCT+TGG - chr3_4:50809367-50809386 None:intergenic 45.0%
!! TTTCTGGCTCACTTCGTGTT+GGG - chr3_4:50809908-50809927 None:intergenic 45.0%
!! ATTTCTGGCTCACTTCGTGT+TGG - chr3_4:50809909-50809928 None:intergenic 45.0%
CATCGAAATACACGTGCTTC+CGG + chr3_4:50810838-50810857 Msa0505360:intron 45.0%
TCTCCTTCATTCATCGAGGA+GGG - chr3_4:50811196-50811215 None:intergenic 45.0%
TTCTCCTTCATTCATCGAGG+AGG - chr3_4:50811197-50811216 None:intergenic 45.0%
!! GAAACATAAATGGTGGTGGG+TGG + chr3_4:50811429-50811448 Msa0505360:intron 45.0%
TTTGTCCCAGATATCAACGG+GGG + chr3_4:50811672-50811691 Msa0505360:intron 45.0%
AATCTCCCCCGTTGATATCT+GGG - chr3_4:50811680-50811699 None:intergenic 45.0%
TAATCTCCCCCGTTGATATC+TGG - chr3_4:50811681-50811700 None:intergenic 45.0%
GCATCTGCATTGCAAGATAG+TGG + chr3_4:50813799-50813818 Msa0505360:CDS 45.0%
ATAGTGGTGTTCGGTTCTTG+TGG + chr3_4:50813815-50813834 Msa0505360:CDS 45.0%
TAGTGGTGTTCGGTTCTTGT+GGG + chr3_4:50813816-50813835 Msa0505360:CDS 45.0%
TGACATGGTGTGACCAATTG+AGG + chr3_4:50813896-50813915 Msa0505360:CDS 45.0%
GACATGGTGTGACCAATTGA+GGG + chr3_4:50813897-50813916 Msa0505360:CDS 45.0%
GGTGGTTATTGGACACATTG+TGG + chr3_4:50813940-50813959 Msa0505360:CDS 45.0%
GTCTAATAGACCCGATCCAA+CGG + chr3_4:50814544-50814563 Msa0505360:three_prime_UTR 45.0%
!!! TTTAAAATCTTATAAATATT+TGG - chr3_4:50810243-50810262 None:intergenic 5.0%
!!! ATTTATAAGATTTTAAATAA+AGG + chr3_4:50810246-50810265 Msa0505360:intron 5.0%
!! ATATATATATATATATATAG+AGG + chr3_4:50811135-50811154 Msa0505360:intron 5.0%
!! TATATATATATATATATAGA+GGG + chr3_4:50811136-50811155 Msa0505360:intron 5.0%
!! TATTTATTAGTTAAAAAATA+TGG - chr3_4:50811838-50811857 None:intergenic 5.0%
!! ATTAATGATTTATTAAAAAA+AGG + chr3_4:50812767-50812786 Msa0505360:intron 5.0%
!! CTTAATTAAAAAAATAAAAA+AGG - chr3_4:50813146-50813165 None:intergenic 5.0%
GTGGTTCCATACCCATCAAG+AGG + chr3_4:50808994-50809013 Msa0505360:CDS 50.0%
GTCACCAACAACGTTAGGGA+TGG - chr3_4:50809157-50809176 None:intergenic 50.0%
!! AAATGGAAGCACCGTTCGAG+CGG + chr3_4:50809211-50809230 Msa0505360:CDS 50.0%
CGATCTAGTAACCGCTCGAA+CGG - chr3_4:50809225-50809244 None:intergenic 50.0%
CGTTCGAGCGGTTACTAGAT+CGG + chr3_4:50809223-50809242 Msa0505360:CDS 50.0%
ATGATAAATGTTGGCGGCCG+CGG - chr3_4:50809261-50809280 None:intergenic 50.0%
! CTCTTTTGGGCAGTTCGTGT+TGG + chr3_4:50809294-50809313 Msa0505360:CDS 50.0%
AAACCGGAGGAATATTCCGG+TGG + chr3_4:50809317-50809336 Msa0505360:CDS 50.0%
! TTGGGTGTTGTGGGTCTGTT+CGG - chr3_4:50810768-50810787 None:intergenic 50.0%
! GTGTTGTTGGTCGTCTTGTG+CGG - chr3_4:50810969-50810988 None:intergenic 50.0%
! CATCGAGGAGGGGTGATTTT+AGG - chr3_4:50811185-50811204 None:intergenic 50.0%
CTCCTTCATTCATCGAGGAG+GGG - chr3_4:50811195-50811214 None:intergenic 50.0%
!!! TGGTGGTGGGTGGTTTTTGT+TGG + chr3_4:50811439-50811458 Msa0505360:intron 50.0%
TAGCAACAAATGAGGGGGGA+GGG - chr3_4:50812371-50812390 None:intergenic 50.0%
ATAGCAACAAATGAGGGGGG+AGG - chr3_4:50812372-50812391 None:intergenic 50.0%
TGGCTAAATCTCCAACCCCA+TGG + chr3_4:50813712-50813731 Msa0505360:CDS 50.0%
ACAAAACGGAACCATGGGGT+TGG - chr3_4:50813726-50813745 None:intergenic 50.0%
!! ATCGGCTTGTACTTCAGCCG+CGG + chr3_4:50809241-50809260 Msa0505360:CDS 55.0%
GGGCAGTTCGTGTTGGAAAC+CGG + chr3_4:50809301-50809320 Msa0505360:CDS 55.0%
CAGTTCGTGTTGGAAACCGG+AGG + chr3_4:50809304-50809323 Msa0505360:CDS 55.0%
CAGCCACCGGAATATTCCTC+CGG - chr3_4:50809323-50809342 None:intergenic 55.0%
ATATTCCGGTGGCTGCGTTC+TGG + chr3_4:50809328-50809347 Msa0505360:CDS 55.0%
ATCGTCCACGTCCAAGCTGT+GGG + chr3_4:50809353-50809372 Msa0505360:CDS 55.0%
CACTTCGTGTTGGGAAGCCT+TGG - chr3_4:50809899-50809918 None:intergenic 55.0%
CACCCCTCCTCGATGAATGA+AGG + chr3_4:50811190-50811209 Msa0505360:intron 55.0%
AGCAACAAATGAGGGGGGAG+GGG - chr3_4:50812370-50812389 None:intergenic 55.0%
GATGTCCAGAACGCAGCCAC+CGG - chr3_4:50809336-50809355 None:intergenic 60.0%
CATCGTCCACGTCCAAGCTG+TGG + chr3_4:50809352-50809371 Msa0505360:CDS 60.0%
TTGCACCCACAGCTTGGACG+TGG - chr3_4:50809361-50809380 None:intergenic 60.0%
GGGCGTCAACGTTGCAGATC+CGG - chr3_4:50810860-50810879 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 50808796 50814573 50808796 ID=Msa0505360;Name=Msa0505360
chr3_4 mRNA 50808796 50814573 50808796 ID=Msa0505360-mRNA-1;Parent=Msa0505360;Name=Msa0505360-mRNA-1;_AED=0.03;_eAED=0.03;_QI=138|1|1|1|1|1|2|220|477
chr3_4 exon 50808796 50809414 50808796 ID=Msa0505360-mRNA-1:exon:11027;Parent=Msa0505360-mRNA-1
chr3_4 exon 50813401 50814573 50813401 ID=Msa0505360-mRNA-1:exon:11028;Parent=Msa0505360-mRNA-1
chr3_4 five_prime_UTR 50808796 50808933 50808796 ID=Msa0505360-mRNA-1:five_prime_utr;Parent=Msa0505360-mRNA-1
chr3_4 CDS 50808934 50809414 50808934 ID=Msa0505360-mRNA-1:cds;Parent=Msa0505360-mRNA-1
chr3_4 CDS 50813401 50814353 50813401 ID=Msa0505360-mRNA-1:cds;Parent=Msa0505360-mRNA-1
chr3_4 three_prime_UTR 50814354 50814573 50814354 ID=Msa0505360-mRNA-1:three_prime_utr;Parent=Msa0505360-mRNA-1
Gene Sequence

>Msa0505360

ATGGAGTTTCAACTTCAAGATCCAAAATCACCCAAAACCTTAACCATGAGCCATGTTTTAGTGGTTCCATACCCATCAAGAGGACACATAAACCCTATGATGAATTTCAGCAAGTTACTTGTCTCTAACAATCCCAACATCCTTGTAACCTTCGTTGTCACACAAGAATGGCTAACCCTAATAAACGTGGAACCAAAACCCGACAACATAAGATTTGAAACCATCCCTAACGTTGTTGGTGACAAATTTATGGATGTTGTTGAAGCTGTTATGACTGAAATGGAAGCACCGTTCGAGCGGTTACTAGATCGGCTTGTACTTCAGCCGCGGCCGCCAACATTTATCATCTGCGATAATTTTCTCTTTTGGGCAGTTCGTGTTGGAAACCGGAGGAATATTCCGGTGGCTGCGTTCTGGACATCGTCCACGTCCAAGCTGTGGGTGCAATTTTTCCATATTTTCTTACAACGGAAGCATTTAGAAGATGGTGAAAATTTTATAGATTATATTCCATCAAATTCTTGGATTCATCTAGCAGATATTCCTCTTCTTGATAAGAACAACCAACAAATTTTGCAATGGTCTCTCAAAAGTTGTCAATGGATTCTCAAAGCACAATATCTATTACTACCTTCAATTTATGAGCTTGAACCTCAAGTAATTGATGCCTTAAAATCAAAGCTCACAATTCCCATTTACTCAATTGGTCCAAACATACCTTACTTTAATCTTGGACACAACTCAAATTCTCTAAATGCTACTAATAATGGTGCTGCCCAAAGTTACATAGATTGGCTAAATCTCCAACCCCATGGTTCCGTTTTGTACATTTCATATGGCAGTTATCTATCGGTTTCAAGAACACAAATGGATGAAATTGCATCTGCATTGCAAGATAGTGGTGTTCGGTTCTTGTGGGTAGCGCGCGACGAGACTAATAGATTGAAACATATGTGTGGGAAAATGGGGTTTGTTGTGACATGGTGTGACCAATTGAGGGTATTGTTACATCCTTCTATAGGTGGTTATTGGACACATTGTGGTTGGAATTCCGTTATTGAAGGTGTTTTTTCTGGGGTTCCTTTTTTAACATTTCCACTTGTTTTGGATCAACCACTAATTAGTAAGATTATAGTTGAGGATTGGAAAATTGGGTGGAGAGTGAAAAAGGACGATAAGTTTGATACTTTGGTGAGAAGAGAGAAAATTGTTGTGTTGATAAAGAAATTCATGGATTTGGATTTTGATTTAGGAAGGGATTTGAGAAAAAGAGCAAAGGAGCTTCAGCTTATATGTCAACTAGCAATAAAGAAAGGTGGATCATCAGAAATCAATGTCAAAGCATTTTTGAAGAATATAATGGAGAGTGGTTTGACACATGAAGCATCAAATGGACTACATGAAGTTCAAGTTGCTATTGAGAATTTCAATTAA
Protein sequence

>Msa0505360

MEFQLQDPKSPKTLTMSHVLVVPYPSRGHINPMMNFSKLLVSNNPNILVTFVVTQEWLTLINVEPKPDNIRFETIPNVVGDKFMDVVEAVMTEMEAPFERLLDRLVLQPRPPTFIICDNFLFWAVRVGNRRNIPVAAFWTSSTSKLWVQFFHIFLQRKHLEDGENFIDYIPSNSWIHLADIPLLDKNNQQILQWSLKSCQWILKAQYLLLPSIYELEPQVIDALKSKLTIPIYSIGPNIPYFNLGHNSNSLNATNNGAAQSYIDWLNLQPHGSVLYISYGSYLSVSRTQMDEIASALQDSGVRFLWVARDETNRLKHMCGKMGFVVTWCDQLRVLLHPSIGGYWTHCGWNSVIEGVFSGVPFLTFPLVLDQPLISKIIVEDWKIGWRVKKDDKFDTLVRREKIVVLIKKFMDLDFDLGRDLRKRAKELQLICQLAIKKGGSSEINVKAFLKNIMESGLTHEASNGLHEVQVAIENFN*