AlfalfaGEDB | Msa1055500

M. sativa cultivar zhongmu-4 / Msa1055500

KEGG: -
GO: GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005975 GO:0005976 GO:0006073 GO:0008150 GO:0008152 GO:0008374 GO:0009987 GO:0010383 GO:0010410 GO:0010411 GO:0012505 GO:0016407 GO:0016413 GO:0016740 GO:0016746 GO:0016747 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044042 GO:0044237 GO:0044238 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0071554 GO:0071704
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1055500	RHN45135.1	68.235	85	19	2	1	85	1	77	5.46e-27	107

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1055500	A0A396H1Y4	68.235	85	19	2	1	85	1	77	2.61e-27	107

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0004360	Msa1055500	0.813633	2.318842e-51	-8.615850e-47
Msa0005050	Msa1055500	0.809730	1.637925e-50	-8.615850e-47
Msa0005710	Msa1055500	0.808839	2.543027e-50	-8.615850e-47
Msa0012440	Msa1055500	0.865010	8.047866e-65	-8.615850e-47
Msa0017120	Msa1055500	0.800682	1.285515e-48	-8.615850e-47
Msa0018220	Msa1055500	0.814270	1.678044e-51	-8.615850e-47
Msa0024680	Msa1055500	0.810834	9.464584e-51	-8.615850e-47
Msa0027540	Msa1055500	0.818826	1.600724e-52	-8.615850e-47
Msa0030590	Msa1055500	0.820933	5.279353e-53	-8.615850e-47
Msa0030730	Msa1055500	0.809074	2.264219e-50	-8.615850e-47
Msa0036430	Msa1055500	0.845514	3.873804e-59	-8.615850e-47
Msa0046750	Msa1055500	0.811954	5.407748e-51	-8.615850e-47
Msa0050430	Msa1055500	0.807071	6.045687e-50	-8.615850e-47
Msa0052460	Msa1055500	0.808814	2.573612e-50	-8.615850e-47
Msa0053110	Msa1055500	0.820226	7.671464e-53	-8.615850e-47
Msa0057240	Msa1055500	0.866991	1.900878e-65	-8.615850e-47
Msa0072810	Msa1055500	0.810759	9.824225e-51	-8.615850e-47
Msa0075310	Msa1055500	0.818491	1.906693e-52	-8.615850e-47
Msa0079040	Msa1055500	0.801086	1.062969e-48	-8.615850e-47
Msa0084500	Msa1055500	0.834763	2.483164e-56	-8.615850e-47
Msa0089210	Msa1055500	0.813762	2.172217e-51	-8.615850e-47
Msa0091770	Msa1055500	0.810919	9.072457e-51	-8.615850e-47
Msa0094420	Msa1055500	0.823870	1.097368e-53	-8.615850e-47
Msa0097050	Msa1055500	0.815782	7.750390e-52	-8.615850e-47
Msa0098440	Msa1055500	0.820998	5.100980e-53	-8.615850e-47
Msa0103000	Msa1055500	0.805148	1.535179e-49	-8.615850e-47
Msa0105420	Msa1055500	0.815680	8.165387e-52	-8.615850e-47
Msa0106790	Msa1055500	0.816246	6.104412e-52	-8.615850e-47
Msa0120330	Msa1055500	0.831183	1.928113e-55	-8.615850e-47
Msa0607200	Msa1055500	0.829464	5.073409e-55	-8.615850e-47
Msa0619330	Msa1055500	0.836255	1.041875e-56	-8.615850e-47
Msa0619980	Msa1055500	0.851214	1.026734e-60	-8.615850e-47
Msa0642650	Msa1055500	0.820736	5.859399e-53	-8.615850e-47
Msa0645050	Msa1055500	0.806136	9.522671e-50	-8.615850e-47
Msa0652980	Msa1055500	0.801810	7.553150e-49	-8.615850e-47
Msa0663090	Msa1055500	0.839786	1.286332e-57	-8.615850e-47
Msa0678890	Msa1055500	0.809786	1.593024e-50	-8.615850e-47
Msa0681890	Msa1055500	0.817047	4.037244e-52	-8.615850e-47
Msa0682400	Msa1055500	0.806589	7.645196e-50	-8.615850e-47
Msa0691160	Msa1055500	0.851023	1.162251e-60	-8.615850e-47
Msa0706370	Msa1055500	0.855829	4.851538e-62	-8.615850e-47
Msa0707220	Msa1055500	0.800225	1.592772e-48	-8.615850e-47
Msa0707780	Msa1055500	0.816463	5.459738e-52	-8.615850e-47
Msa0725480	Msa1055500	-0.822519	2.268723e-53	-8.615850e-47
Msa0730180	Msa1055500	0.822529	2.255812e-53	-8.615850e-47
Msa0740420	Msa1055500	0.817851	2.661228e-52	-8.615850e-47
Msa0741900	Msa1055500	0.808689	2.737508e-50	-8.615850e-47
Msa0747780	Msa1055500	0.820970	5.176734e-53	-8.615850e-47
Msa0754720	Msa1055500	-0.808451	3.076908e-50	-8.615850e-47
Msa0756480	Msa1055500	0.801188	1.013160e-48	-8.615850e-47
Msa0766100	Msa1055500	-0.807908	4.015755e-50	-8.615850e-47
Msa0770430	Msa1055500	0.814651	1.382195e-51	-8.615850e-47
Msa0772020	Msa1055500	0.818891	1.547165e-52	-8.615850e-47
Msa0792510	Msa1055500	0.817501	3.192315e-52	-8.615850e-47
Msa0799210	Msa1055500	0.813056	3.105396e-51	-8.615850e-47
Msa0810020	Msa1055500	0.855159	7.605193e-62	-8.615850e-47
Msa0820670	Msa1055500	0.825282	5.102567e-54	-8.615850e-47
Msa0822990	Msa1055500	0.826300	2.926710e-54	-8.615850e-47
Msa0837990	Msa1055500	0.821058	4.940042e-53	-8.615850e-47
Msa0128370	Msa1055500	0.821981	3.023771e-53	-8.615850e-47
Msa0130570	Msa1055500	0.858000	1.112428e-62	-8.615850e-47
Msa0134040	Msa1055500	0.807928	3.977889e-50	-8.615850e-47
Msa0134130	Msa1055500	0.824100	9.692618e-54	-8.615850e-47
Msa0135980	Msa1055500	0.823313	1.481480e-53	-8.615850e-47
Msa0139900	Msa1055500	0.819495	1.126959e-52	-8.615850e-47
Msa0141670	Msa1055500	0.815508	8.918960e-52	-8.615850e-47
Msa0148780	Msa1055500	0.806895	6.587517e-50	-8.615850e-47
Msa0149500	Msa1055500	0.811615	6.408777e-51	-8.615850e-47
Msa0149560	Msa1055500	0.870792	1.116060e-66	-8.615850e-47
Msa0153420	Msa1055500	0.803860	2.850017e-49	-8.615850e-47
Msa0161100	Msa1055500	0.825405	4.772621e-54	-8.615850e-47
Msa0161200	Msa1055500	0.839131	1.903885e-57	-8.615850e-47
Msa0161210	Msa1055500	0.821946	3.080515e-53	-8.615850e-47
Msa0168100	Msa1055500	0.820414	6.946550e-53	-8.615850e-47
Msa0172350	Msa1055500	0.811649	6.300412e-51	-8.615850e-47
Msa0174560	Msa1055500	0.821251	4.458304e-53	-8.615850e-47
Msa0176470	Msa1055500	0.849123	3.956524e-60	-8.615850e-47
Msa0181090	Msa1055500	0.805045	1.613096e-49	-8.615850e-47
Msa0183610	Msa1055500	0.800215	1.600072e-48	-8.615850e-47
Msa0184990	Msa1055500	0.821892	3.170417e-53	-8.615850e-47
Msa0200970	Msa1055500	0.825308	5.031453e-54	-8.615850e-47
Msa0203030	Msa1055500	0.814140	1.792958e-51	-8.615850e-47
Msa0203160	Msa1055500	0.816842	4.489590e-52	-8.615850e-47
Msa0207000	Msa1055500	0.825777	3.895068e-54	-8.615850e-47
Msa0207180	Msa1055500	0.810080	1.376683e-50	-8.615850e-47
Msa0208520	Msa1055500	0.822438	2.369002e-53	-8.615850e-47
Msa0213080	Msa1055500	0.808671	2.762180e-50	-8.615850e-47
Msa0217470	Msa1055500	0.806807	6.875070e-50	-8.615850e-47
Msa0219190	Msa1055500	0.849707	2.720649e-60	-8.615850e-47
Msa0219310	Msa1055500	0.826356	2.838083e-54	-8.615850e-47
Msa0227490	Msa1055500	0.802532	5.365278e-49	-8.615850e-47
Msa0227500	Msa1055500	0.830115	3.521708e-55	-8.615850e-47
Msa0235890	Msa1055500	0.831086	2.036940e-55	-8.615850e-47
Msa0236110	Msa1055500	0.803025	4.244948e-49	-8.615850e-47
Msa0370600	Msa1055500	0.801716	7.895269e-49	-8.615850e-47
Msa0371610	Msa1055500	0.808806	2.584570e-50	-8.615850e-47
Msa0382560	Msa1055500	0.846813	1.716142e-59	-8.615850e-47
Msa0413180	Msa1055500	0.801735	7.824764e-49	-8.615850e-47
Msa0413710	Msa1055500	0.823412	1.404459e-53	-8.615850e-47
Msa0413930	Msa1055500	0.880627	4.696938e-70	-8.615850e-47
Msa0418200	Msa1055500	0.807965	3.906837e-50	-8.615850e-47
Msa0422320	Msa1055500	0.802334	5.895085e-49	-8.615850e-47
Msa0423360	Msa1055500	-0.811755	5.973168e-51	-8.615850e-47
Msa0436450	Msa1055500	0.802562	5.288944e-49	-8.615850e-47
Msa0436460	Msa1055500	0.847961	8.303358e-60	-8.615850e-47
Msa0436500	Msa1055500	0.832459	9.341363e-56	-8.615850e-47
Msa0442880	Msa1055500	0.801213	1.001306e-48	-8.615850e-47
Msa0444010	Msa1055500	0.853628	2.107424e-61	-8.615850e-47
Msa0458830	Msa1055500	0.804971	1.672235e-49	-8.615850e-47
Msa0458950	Msa1055500	0.851980	6.229459e-61	-8.615850e-47
Msa0464540	Msa1055500	0.809267	2.059074e-50	-8.615850e-47
Msa0468760	Msa1055500	0.812576	3.955054e-51	-8.615850e-47
Msa0473530	Msa1055500	0.819131	1.363980e-52	-8.615850e-47
Msa0988480	Msa1055500	0.854514	1.170260e-61	-8.615850e-47
Msa0990520	Msa1055500	0.803412	3.529687e-49	-8.615850e-47
Msa1004500	Msa1055500	0.814914	1.208527e-51	-8.615850e-47
Msa1007350	Msa1055500	0.804786	1.827698e-49	-8.615850e-47
Msa1014270	Msa1055500	0.800728	1.257607e-48	-8.615850e-47
Msa1018790	Msa1055500	0.854894	9.079086e-62	-8.615850e-47
Msa1024140	Msa1055500	0.809423	1.905917e-50	-8.615850e-47
Msa1033560	Msa1055500	0.867623	1.193824e-65	-8.615850e-47
Msa1037920	Msa1055500	0.801866	7.354497e-49	-8.615850e-47
Msa1040830	Msa1055500	0.810163	1.321536e-50	-8.615850e-47
Msa1041530	Msa1055500	0.805962	1.036001e-49	-8.615850e-47
Msa1044340	Msa1055500	0.813945	1.979482e-51	-8.615850e-47
Msa1045880	Msa1055500	0.804736	1.871900e-49	-8.615850e-47
Msa1045970	Msa1055500	0.806573	7.705584e-50	-8.615850e-47
Msa1046870	Msa1055500	0.810985	8.779191e-51	-8.615850e-47
Msa1055260	Msa1055500	0.822423	2.387426e-53	-8.615850e-47
Msa1055280	Msa1055500	0.814138	1.794720e-51	-8.615850e-47
Msa1055500	Msa1073340	0.819285	1.258287e-52	-8.615850e-47
Msa1055500	Msa1073350	0.847496	1.114704e-59	-8.615850e-47
Msa1055500	Msa1073840	0.812142	4.919374e-51	-8.615850e-47
Msa1055500	Msa1095470	0.825804	3.839200e-54	-8.615850e-47
Msa1055500	Msa1097380	0.805567	1.254214e-49	-8.615850e-47
Msa1055500	Msa1097640	0.811339	7.356259e-51	-8.615850e-47
Msa1055500	Msa1098560	0.800763	1.237148e-48	-8.615850e-47
Msa1055500	Msa1106560	0.814341	1.618783e-51	-8.615850e-47
Msa1055500	Msa1106810	0.850506	1.624716e-60	-8.615850e-47
Msa1055500	Msa1107440	0.802113	6.542932e-49	-8.615850e-47
Msa1055500	Msa1107970	0.809670	1.687171e-50	-8.615850e-47
Msa1055500	Msa1112610	0.808265	3.372258e-50	-8.615850e-47
Msa1055500	Msa1113850	0.866639	2.460623e-65	-8.615850e-47
Msa1055500	Msa1125780	0.800292	1.543186e-48	-8.615850e-47
Msa1055500	Msa1125950	0.800688	1.281505e-48	-8.615850e-47
Msa1055500	Msa1139810	0.827276	1.710487e-54	-8.615850e-47
Msa1055500	Msa1145020	0.812091	5.048320e-51	-8.615850e-47
Msa1055500	Msa1147270	0.810121	1.349352e-50	-8.615850e-47
Msa1055500	Msa1149760	0.807614	4.639059e-50	-8.615850e-47
Msa1055500	Msa1150970	0.807341	5.299268e-50	-8.615850e-47
Msa1055500	Msa1151960	0.822639	2.127642e-53	-8.615850e-47
Msa1055500	Msa1159100	0.804351	2.252501e-49	-8.615850e-47
Msa1055500	Msa1159360	0.802899	4.505649e-49	-8.615850e-47
Msa1055500	Msa1159990	0.809059	2.281976e-50	-8.615850e-47
Msa1055500	Msa1160400	0.857416	1.657370e-62	-8.615850e-47
Msa1055500	Msa1172590	0.824067	9.868227e-54	-8.615850e-47
Msa1055500	Msa1186210	0.820383	7.060401e-53	-8.615850e-47
Msa1055500	Msa1220450	-0.806139	9.508946e-50	-8.615850e-47
Msa1055500	Msa1220460	-0.810397	1.176623e-50	-8.615850e-47
Msa1055500	Msa1220480	-0.809692	1.668594e-50	-8.615850e-47
Msa1055500	Msa1221260	0.811875	5.623704e-51	-8.615850e-47
Msa1055500	Msa1221560	0.833221	6.041503e-56	-8.615850e-47
Msa1055500	Msa1228610	0.803182	3.938868e-49	-8.615850e-47
Msa1055500	Msa1229560	0.801395	9.190266e-49	-8.615850e-47
Msa1055500	Msa1242330	0.801735	7.827368e-49	-8.615850e-47
Msa1055500	Msa1249870	0.821216	4.543569e-53	-8.615850e-47
Msa1055500	Msa1254770	0.824167	9.347733e-54	-8.615850e-47
Msa1055500	Msa1254800	0.823791	1.145143e-53	-8.615850e-47
Msa1055500	Msa1265960	0.800750	1.244566e-48	-8.615850e-47
Msa1055500	Msa1281720	0.832638	8.433394e-56	-8.615850e-47
Msa1055500	Msa1302150	0.814801	1.280086e-51	-8.615850e-47
Msa1055500	Msa1321000	0.853781	1.904682e-61	-8.615850e-47
Msa1055500	Msa1323060	0.817631	2.983297e-52	-8.615850e-47
Msa1055500	Msa1337340	0.800125	1.668876e-48	-8.615850e-47
Msa1055500	Msa1354040	0.824250	8.935318e-54	-8.615850e-47
Msa1055500	Msa1355400	0.803168	3.965043e-49	-8.615850e-47
Msa1055500	Msa1362350	0.802889	4.527897e-49	-8.615850e-47
Msa1055500	Msa1365200	0.822947	1.803030e-53	-8.615850e-47
Msa1055500	Msa1365320	0.800448	1.434239e-48	-8.615850e-47
Msa1055500	Msa1373950	0.813644	2.306580e-51	-8.615850e-47
Msa1055500	Msa1374440	0.849966	2.303075e-60	-8.615850e-47
Msa1055500	Msa1375940	0.815471	9.087808e-52	-8.615850e-47
Msa1055500	Msa1379980	0.806822	6.826338e-50	-8.615850e-47
Msa1055500	Msa1379990	0.872650	2.700950e-67	-8.615850e-47
Msa1055500	Msa1385620	0.802067	6.688354e-49	-8.615850e-47
Msa1055500	Msa1385900	0.834169	3.501703e-56	-8.615850e-47
Msa1055500	Msa1390310	0.817189	3.750825e-52	-8.615850e-47
Msa1055500	Msa1418200	0.809284	2.042023e-50	-8.615850e-47
Msa1055500	Msa1420060	0.872853	2.311363e-67	-8.615850e-47
Msa1055500	Msa1422270	0.835879	1.297355e-56	-8.615850e-47
Msa1055500	Msa1429420	0.866947	1.963141e-65	-8.615850e-47
Msa1055500	Msa1429830	0.831656	1.475449e-55	-8.615850e-47
Msa1055500	Msa1435040	0.818781	1.638506e-52	-8.615850e-47
Msa1055500	Msa1435670	0.843841	1.093081e-58	-8.615850e-47
Msa1055500	Msa1439670	0.828308	9.665939e-55	-8.615850e-47
Msa1055500	Msa1440340	0.803210	3.885629e-49	-8.615850e-47
Msa1055500	Msa1455620	0.800567	1.356792e-48	-8.615850e-47
Msa1055500	Msa1464560	0.820082	8.275794e-53	-8.615850e-47
Msa0253980	Msa1055500	0.800341	1.508211e-48	-8.615850e-47
Msa0257310	Msa1055500	0.837548	4.871328e-57	-8.615850e-47
Msa0258940	Msa1055500	0.827585	1.442425e-54	-8.615850e-47
Msa0267760	Msa1055500	0.816801	4.585172e-52	-8.615850e-47
Msa0274780	Msa1055500	0.812969	3.243787e-51	-8.615850e-47
Msa0280490	Msa1055500	0.814528	1.471331e-51	-8.615850e-47
Msa0288200	Msa1055500	0.807406	5.135210e-50	-8.615850e-47
Msa0296610	Msa1055500	0.804987	1.659199e-49	-8.615850e-47
Msa0297920	Msa1055500	0.804768	1.843590e-49	-8.615850e-47
Msa0298240	Msa1055500	0.823586	1.278926e-53	-8.615850e-47
Msa0298940	Msa1055500	0.809762	1.611879e-50	-8.615850e-47
Msa0298970	Msa1055500	0.817383	3.393057e-52	-8.615850e-47
Msa0301180	Msa1055500	0.827968	1.166683e-54	-8.615850e-47
Msa0315240	Msa1055500	0.827137	1.847444e-54	-8.615850e-47
Msa0315480	Msa1055500	0.822707	2.050990e-53	-8.615850e-47
Msa0316850	Msa1055500	0.801610	8.302237e-49	-8.615850e-47
Msa0320540	Msa1055500	0.818799	1.622942e-52	-8.615850e-47
Msa0322830	Msa1055500	0.827328	1.662213e-54	-8.615850e-47
Msa0326540	Msa1055500	0.806596	7.616938e-50	-8.615850e-47
Msa0331780	Msa1055500	0.827970	1.165604e-54	-8.615850e-47
Msa0342200	Msa1055500	0.801789	7.627732e-49	-8.615850e-47
Msa0344070	Msa1055500	0.800975	1.119700e-48	-8.615850e-47
Msa0357390	Msa1055500	0.803910	2.782112e-49	-8.615850e-47
Msa0484690	Msa1055500	0.847581	1.056596e-59	-8.615850e-47
Msa0490300	Msa1055500	0.824323	8.591976e-54	-8.615850e-47
Msa0490350	Msa1055500	0.800110	1.680665e-48	-8.615850e-47
Msa0504730	Msa1055500	0.809419	1.910463e-50	-8.615850e-47
Msa0505360	Msa1055500	0.807150	5.817625e-50	-8.615850e-47
Msa0508200	Msa1055500	0.801789	7.629603e-49	-8.615850e-47
Msa0509970	Msa1055500	0.801191	1.011635e-48	-8.615850e-47
Msa0517300	Msa1055500	0.800380	1.481088e-48	-8.615850e-47
Msa0521880	Msa1055500	0.801446	8.969493e-49	-8.615850e-47
Msa0524050	Msa1055500	0.802322	5.928250e-49	-8.615850e-47
Msa0524120	Msa1055500	0.818950	1.499709e-52	-8.615850e-47
Msa0525240	Msa1055500	0.841969	3.442525e-58	-8.615850e-47
Msa0526710	Msa1055500	0.812453	4.207118e-51	-8.615850e-47
Msa0546380	Msa1055500	0.816845	4.482177e-52	-8.615850e-47
Msa0574170	Msa1055500	0.805472	1.313459e-49	-8.615850e-47
Msa0575250	Msa1055500	0.836283	1.024450e-56	-8.615850e-47
Msa0576420	Msa1055500	0.819513	1.116558e-52	-8.615850e-47
Msa0581340	Msa1055500	0.809417	1.911952e-50	-8.615850e-47
Msa0583590	Msa1055500	0.813170	2.931075e-51	-8.615850e-47
Msa0585730	Msa1055500	0.800452	1.432105e-48	-8.615850e-47
Msa0600390	Msa1055500	0.800925	1.146344e-48	-8.615850e-47
Msa0850500	Msa1055500	0.849732	2.676305e-60	-8.615850e-47
Msa0853320	Msa1055500	0.807742	4.356298e-50	-8.615850e-47
Msa0854570	Msa1055500	0.800427	1.448816e-48	-8.615850e-47
Msa0862100	Msa1055500	0.855192	7.439636e-62	-8.615850e-47
Msa0870620	Msa1055500	0.822359	2.470841e-53	-8.615850e-47
Msa0872310	Msa1055500	0.809358	1.968907e-50	-8.615850e-47
Msa0873190	Msa1055500	0.841083	5.890855e-58	-8.615850e-47
Msa0880710	Msa1055500	0.805504	1.293027e-49	-8.615850e-47
Msa0885060	Msa1055500	0.837507	4.991394e-57	-8.615850e-47
Msa0886980	Msa1055500	0.830515	2.812587e-55	-8.615850e-47
Msa0889740	Msa1055500	0.801568	8.468074e-49	-8.615850e-47
Msa0890250	Msa1055500	0.824808	6.602370e-54	-8.615850e-47
Msa0903730	Msa1055500	0.804942	1.695098e-49	-8.615850e-47
Msa0905550	Msa1055500	0.836125	1.123714e-56	-8.615850e-47
Msa0906370	Msa1055500	0.808264	3.373922e-50	-8.615850e-47
Msa0907700	Msa1055500	0.807116	5.915911e-50	-8.615850e-47
Msa0911990	Msa1055500	0.802416	5.670155e-49	-8.615850e-47
Msa0925160	Msa1055500	0.825054	5.777339e-54	-8.615850e-47
Msa0930330	Msa1055500	0.824396	8.256865e-54	-8.615850e-47
Msa0931610	Msa1055500	0.817422	3.325887e-52	-8.615850e-47
Msa0937550	Msa1055500	0.832524	8.998548e-56	-8.615850e-47
Msa0938430	Msa1055500	0.813548	2.420820e-51	-8.615850e-47
Msa0946320	Msa1055500	0.851917	6.494296e-61	-8.615850e-47
Msa0951710	Msa1055500	0.850910	1.250759e-60	-8.615850e-47
Msa0955260	Msa1055500	0.807014	6.215103e-50	-8.615850e-47
Msa0974750	Msa1055500	0.815408	9.387213e-52	-8.615850e-47
Msa0975580	Msa1055500	0.820159	7.945907e-53	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1055500	MtrunA17_Chr7g0227021	68.235	85	19	2	1	85	1	77	5.02e-31	107

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 16 sgRNAs with CRISPR-Local

Find 27 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGTGGAAGGCACAAATGTTT+TGG	0.358210	7_2:+29989921	None:intergenic
TTATGGGAGAAGATTCCTTC+AGG	0.401427	7_2:+29989534	None:intergenic
ATTTCCCCTCCTTTAACAAA+AGG	0.422854	7_2:-29989799	Msa1055500:CDS
TATAGGCAAATTAGAGCTAA+AGG	0.453977	7_2:+29989883	None:intergenic
TGAGTGATGGGAGTGTAAAA+TGG	0.454963	7_2:+29989838	None:intergenic
GGGAAATAGAAAGTGAAGAT+TGG	0.478384	7_2:+29989815	None:intergenic
AAGTGAAGATTGGTGAGTGA+TGG	0.499564	7_2:+29989825	None:intergenic
ATGAGGAGAAGTAAAAGTAT+AGG	0.508071	7_2:+29989866	None:intergenic
AGTGAAGATTGGTGAGTGAT+GGG	0.518584	7_2:+29989826	None:intergenic
TTTAATAATTAAAATGCTTG+TGG	0.520572	7_2:+29989467	None:intergenic
AGTGTAAAATGGAGTAAATG+AGG	0.541294	7_2:+29989849	None:intergenic
AGGTAGCAGAGAATAGAAAG+TGG	0.576522	7_2:+29989903	None:intergenic
AGCAGAGAATAGAAAGTGGA+AGG	0.585262	7_2:+29989907	None:intergenic
AGACAATAGTTGAGATTACA+CGG	0.591351	7_2:+29989501	None:intergenic
TTAAGAGTGTCACAACCTGA+AGG	0.594460	7_2:-29989549	Msa1055500:intron
GACAATAGTTGAGATTACAC+GGG	0.693195	7_2:+29989502	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GTTAATTTACCTTTTGTTAA+AGG	+	chr7_2:29989646-29989665	None:intergenic	20.0%
!!	TATGATATAAACATAGAAGA+TGG	+	chr7_2:29989702-29989721	None:intergenic	20.0%
!!	ATCTTCTATGTTTATATCAT+AGG	-	chr7_2:29989701-29989720	Msa1055500:intron	20.0%
!!!	AATTTGATCGATATTTTTGA+TGG	-	chr7_2:29989789-29989808	Msa1055500:CDS	20.0%
!!!	ATTTGATCGATATTTTTGAT+GGG	-	chr7_2:29989790-29989809	Msa1055500:CDS	20.0%
!!	ATTTACCTTTTGTTAAAGGA+GGG	+	chr7_2:29989642-29989661	None:intergenic	25.0%
!!	AATTTACCTTTTGTTAAAGG+AGG	+	chr7_2:29989643-29989662	None:intergenic	25.0%
!!!	TTTGATCGATATTTTTGATG+GGG	-	chr7_2:29989791-29989810	Msa1055500:CDS	25.0%
	TATAGGCAAATTAGAGCTAA+AGG	+	chr7_2:29989553-29989572	None:intergenic	30.0%
!	ATGAGGAGAAGTAAAAGTAT+AGG	+	chr7_2:29989570-29989589	None:intergenic	30.0%
	AGTGTAAAATGGAGTAAATG+AGG	+	chr7_2:29989587-29989606	None:intergenic	30.0%
!	TTTACCTTTTGTTAAAGGAG+GGG	+	chr7_2:29989641-29989660	None:intergenic	30.0%
!!	TTGATCGATATTTTTGATGG+GGG	-	chr7_2:29989792-29989811	Msa1055500:CDS	30.0%
	AGACAATAGTTGAGATTACA+CGG	+	chr7_2:29989935-29989954	None:intergenic	30.0%
	GGGAAATAGAAAGTGAAGAT+TGG	+	chr7_2:29989621-29989640	None:intergenic	35.0%
	ATTTCCCCTCCTTTAACAAA+AGG	-	chr7_2:29989634-29989653	Msa1055500:CDS	35.0%
!	ACACGGGAGAAAACTTTTAT+GGG	+	chr7_2:29989918-29989937	None:intergenic	35.0%
!	TACACGGGAGAAAACTTTTA+TGG	+	chr7_2:29989919-29989938	None:intergenic	35.0%
	GACAATAGTTGAGATTACAC+GGG	+	chr7_2:29989934-29989953	None:intergenic	35.0%
!!	AGTGGAAGGCACAAATGTTT+TGG	+	chr7_2:29989515-29989534	None:intergenic	40.0%
	AGCAGAGAATAGAAAGTGGA+AGG	+	chr7_2:29989529-29989548	None:intergenic	40.0%
	AGGTAGCAGAGAATAGAAAG+TGG	+	chr7_2:29989533-29989552	None:intergenic	40.0%
!	TGAGTGATGGGAGTGTAAAA+TGG	+	chr7_2:29989598-29989617	None:intergenic	40.0%
	AGTGAAGATTGGTGAGTGAT+GGG	+	chr7_2:29989610-29989629	None:intergenic	40.0%
	AAGTGAAGATTGGTGAGTGA+TGG	+	chr7_2:29989611-29989630	None:intergenic	40.0%
!!	TTAAGAGTGTCACAACCTGA+AGG	-	chr7_2:29989884-29989903	Msa1055500:CDS	40.0%
	TTATGGGAGAAGATTCCTTC+AGG	+	chr7_2:29989902-29989921	None:intergenic	40.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_2	gene	29989475	29989980	29989475	ID=Msa1055500;Name=Msa1055500
chr7_2	mRNA	29989475	29989980	29989475	ID=Msa1055500-mRNA-1;Parent=Msa1055500;Name=Msa1055500-mRNA-1;_AED=0.45;_eAED=0.70;_QI=0\|0\|0\|1\|0\|0\|3\|0\|129
chr7_2	exon	29989771	29989980	29989771	ID=Msa1055500-mRNA-1:exon:6208;Parent=Msa1055500-mRNA-1
chr7_2	exon	29989579	29989666	29989579	ID=Msa1055500-mRNA-1:exon:6207;Parent=Msa1055500-mRNA-1
chr7_2	exon	29989475	29989566	29989475	ID=Msa1055500-mRNA-1:exon:6206;Parent=Msa1055500-mRNA-1
chr7_2	CDS	29989771	29989980	29989771	ID=Msa1055500-mRNA-1:cds;Parent=Msa1055500-mRNA-1
chr7_2	CDS	29989579	29989666	29989579	ID=Msa1055500-mRNA-1:cds;Parent=Msa1055500-mRNA-1
chr7_2	CDS	29989475	29989566	29989475	ID=Msa1055500-mRNA-1:cds;Parent=Msa1055500-mRNA-1

Gene Sequence

>Msa1055500

ATGATAACAATTACAAAGACATTCAAAGAAAAACTCACCAAAACATTTGTGCCTTCCACTTTCTATTCTCTGCTACCTTTAGCTCTAATTTGCCTATACTTTTACTTCTCCTCATTTACTCCATTTTACACTCCCATCACTCACCAATCTTCACTTTCTATTTCCCCTCCTTTAACAAAAGGTAAATTAACTAGCACTGTAACTTTGCTAAATTTGATCGATATTTTTGATGGGGGAACTTCTATGTACAATTCAAAGTTGTTTTTTGTTTGTGTCTCACTTTATAGATACTTTAGAAAGTGTCACAACCTGAAGGAATCTTCTCCCATAAAAGTTTTCTCCCGTGTAATCTCAACTATTGTCTTTTTTTTTGTACCACAAGCATTTTAA

Protein sequence

>Msa1055500

MITITKTFKEKLTKTFVPSTFYSLLPLALICLYFYFSSFTPFYTPITHQSSLSISPPLTKGKLTSTVTLLNLIDIFDGGTSMYNSKLFFVCVSLYRYFRKCHNLKESSPIKVFSRVISTIVFFFVPQAF*