Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0716450 | XP_003611976.1 | 95.319 | 470 | 16 | 1 | 1 | 464 | 1 | 470 | 0.0 | 900 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0716450 | sp|Q8L7A0|TAUE3_ARATH | 62.393 | 468 | 160 | 5 | 10 | 462 | 6 | 472 | 0.0 | 543 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0716450 | G7ZW19 | 95.319 | 470 | 16 | 1 | 1 | 464 | 1 | 470 | 0.0 | 900 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0716450 | -0.807050 | 6.107330e-50 | -8.615850e-47 |
| Msa0004880 | Msa0716450 | 0.819879 | 9.213062e-53 | -8.615850e-47 |
| Msa0012440 | Msa0716450 | 0.818014 | 2.445369e-52 | -8.615850e-47 |
| Msa0017510 | Msa0716450 | 0.832456 | 9.355061e-56 | -8.615850e-47 |
| Msa0022640 | Msa0716450 | 0.809838 | 1.552378e-50 | -8.615850e-47 |
| Msa0028640 | Msa0716450 | 0.800759 | 1.239661e-48 | -8.615850e-47 |
| Msa0029540 | Msa0716450 | -0.801961 | 7.033951e-49 | -8.615850e-47 |
| Msa0036430 | Msa0716450 | 0.814615 | 1.407792e-51 | -8.615850e-47 |
| Msa0036960 | Msa0716450 | 0.814544 | 1.459406e-51 | -8.615850e-47 |
| Msa0038350 | Msa0716450 | -0.810121 | 1.349124e-50 | -8.615850e-47 |
| Msa0044100 | Msa0716450 | 0.870212 | 1.729997e-66 | -8.615850e-47 |
| Msa0046750 | Msa0716450 | 0.801528 | 8.631273e-49 | -8.615850e-47 |
| Msa0050940 | Msa0716450 | 0.807548 | 4.791088e-50 | -8.615850e-47 |
| Msa0054640 | Msa0716450 | 0.802818 | 4.682772e-49 | -8.615850e-47 |
| Msa0057240 | Msa0716450 | 0.815869 | 7.412183e-52 | -8.615850e-47 |
| Msa0072370 | Msa0716450 | 0.830341 | 3.101885e-55 | -8.615850e-47 |
| Msa0075310 | Msa0716450 | 0.808747 | 2.660860e-50 | -8.615850e-47 |
| Msa0078430 | Msa0716450 | 0.804284 | 2.325946e-49 | -8.615850e-47 |
| Msa0091770 | Msa0716450 | 0.810004 | 1.429932e-50 | -8.615850e-47 |
| Msa0094100 | Msa0716450 | 0.804425 | 2.173889e-49 | -8.615850e-47 |
| Msa0095540 | Msa0716450 | 0.846512 | 2.073258e-59 | -8.615850e-47 |
| Msa0098440 | Msa0716450 | 0.800385 | 1.477608e-48 | -8.615850e-47 |
| Msa0101810 | Msa0716450 | -0.830193 | 3.370946e-55 | -8.615850e-47 |
| Msa0105420 | Msa0716450 | 0.834797 | 2.435424e-56 | -8.615850e-47 |
| Msa0110970 | Msa0716450 | 0.808539 | 2.947515e-50 | -8.615850e-47 |
| Msa0611380 | Msa0716450 | 0.887694 | 1.139376e-72 | -8.615850e-47 |
| Msa0618180 | Msa0716450 | 0.861223 | 1.193386e-63 | -8.615850e-47 |
| Msa0618220 | Msa0716450 | 0.842845 | 2.015971e-58 | -8.615850e-47 |
| Msa0618290 | Msa0716450 | 0.813677 | 2.267421e-51 | -8.615850e-47 |
| Msa0619990 | Msa0716450 | 0.853471 | 2.338092e-61 | -8.615850e-47 |
| Msa0621890 | Msa0716450 | 0.850090 | 2.125221e-60 | -8.615850e-47 |
| Msa0628640 | Msa0716450 | 0.888015 | 8.581122e-73 | -8.615850e-47 |
| Msa0631120 | Msa0716450 | 0.896818 | 2.558716e-76 | -8.615850e-47 |
| Msa0649970 | Msa0716450 | 0.805216 | 1.485595e-49 | -8.615850e-47 |
| Msa0650070 | Msa0716450 | 0.814167 | 1.768501e-51 | -8.615850e-47 |
| Msa0653020 | Msa0716450 | 0.802641 | 5.095009e-49 | -8.615850e-47 |
| Msa0657970 | Msa0716450 | 0.810079 | 1.377343e-50 | -8.615850e-47 |
| Msa0666030 | Msa0716450 | 0.890183 | 1.240175e-73 | -8.615850e-47 |
| Msa0669340 | Msa0716450 | 0.880210 | 6.623262e-70 | -8.615850e-47 |
| Msa0684500 | Msa0716450 | 0.836220 | 1.063036e-56 | -8.615850e-47 |
| Msa0692060 | Msa0716450 | 0.819134 | 1.362330e-52 | -8.615850e-47 |
| Msa0701770 | Msa0716450 | 0.801827 | 7.494153e-49 | -8.615850e-47 |
| Msa0701970 | Msa0716450 | 0.861453 | 1.015380e-63 | -8.615850e-47 |
| Msa0706420 | Msa0716450 | 0.830391 | 3.015908e-55 | -8.615850e-47 |
| Msa0716450 | Msa0717260 | 0.917077 | 8.229372e-86 | -8.615850e-47 |
| Msa0716450 | Msa0719490 | -0.812803 | 3.528426e-51 | -8.615850e-47 |
| Msa0716450 | Msa0725480 | -0.800592 | 1.341028e-48 | -8.615850e-47 |
| Msa0716450 | Msa0734230 | 0.840577 | 7.995152e-58 | -8.615850e-47 |
| Msa0716450 | Msa0741900 | 0.814984 | 1.166158e-51 | -8.615850e-47 |
| Msa0716450 | Msa0754720 | -0.815745 | 7.896519e-52 | -8.615850e-47 |
| Msa0716450 | Msa0756630 | -0.820966 | 5.188058e-53 | -8.615850e-47 |
| Msa0716450 | Msa0758320 | 0.900287 | 8.520231e-78 | -8.615850e-47 |
| Msa0716450 | Msa0766100 | -0.821367 | 4.192789e-53 | -8.615850e-47 |
| Msa0716450 | Msa0775440 | 0.869844 | 2.282782e-66 | -8.615850e-47 |
| Msa0716450 | Msa0787260 | 0.817124 | 3.880691e-52 | -8.615850e-47 |
| Msa0716450 | Msa0789570 | 0.808852 | 2.526755e-50 | -8.615850e-47 |
| Msa0716450 | Msa0799030 | 0.937915 | 1.590992e-98 | -8.615850e-47 |
| Msa0716450 | Msa0799700 | 0.855267 | 7.075857e-62 | -8.615850e-47 |
| Msa0716450 | Msa0810020 | 0.834283 | 3.278251e-56 | -8.615850e-47 |
| Msa0716450 | Msa0812820 | 0.849944 | 2.335814e-60 | -8.615850e-47 |
| Msa0716450 | Msa0822990 | 0.828202 | 1.025028e-54 | -8.615850e-47 |
| Msa0716450 | Msa0829620 | 0.810191 | 1.302912e-50 | -8.615850e-47 |
| Msa0716450 | Msa0837440 | 0.932657 | 6.125123e-95 | -8.615850e-47 |
| Msa0716450 | Msa0837980 | 0.908955 | 9.702560e-82 | -8.615850e-47 |
| Msa0716450 | Msa0845590 | -0.811843 | 5.716758e-51 | -8.615850e-47 |
| Msa0716450 | Msa0853320 | 0.880888 | 3.785890e-70 | -8.615850e-47 |
| Msa0716450 | Msa0858840 | 0.802249 | 6.135978e-49 | -8.615850e-47 |
| Msa0716450 | Msa0862100 | 0.812005 | 5.268587e-51 | -8.615850e-47 |
| Msa0716450 | Msa0867890 | 0.817950 | 2.526977e-52 | -8.615850e-47 |
| Msa0716450 | Msa0870530 | 0.800053 | 1.725846e-48 | -8.615850e-47 |
| Msa0716450 | Msa0870620 | 0.817968 | 2.504569e-52 | -8.615850e-47 |
| Msa0716450 | Msa0872310 | 0.812810 | 3.515776e-51 | -8.615850e-47 |
| Msa0716450 | Msa0880140 | 0.833420 | 5.388917e-56 | -8.615850e-47 |
| Msa0716450 | Msa0880710 | 0.824333 | 8.545544e-54 | -8.615850e-47 |
| Msa0716450 | Msa0885060 | 0.806773 | 6.989694e-50 | -8.615850e-47 |
| Msa0716450 | Msa0894890 | 0.810137 | 1.338630e-50 | -8.615850e-47 |
| Msa0716450 | Msa0896210 | 0.806492 | 8.013967e-50 | -8.615850e-47 |
| Msa0716450 | Msa0896220 | 0.802848 | 4.617117e-49 | -8.615850e-47 |
| Msa0716450 | Msa0936270 | 0.827362 | 1.631445e-54 | -8.615850e-47 |
| Msa0716450 | Msa0944770 | 0.818978 | 1.478059e-52 | -8.615850e-47 |
| Msa0716450 | Msa0951710 | 0.801157 | 1.028149e-48 | -8.615850e-47 |
| Msa0716450 | Msa0966420 | 0.821039 | 4.991061e-53 | -8.615850e-47 |
| Msa0716450 | Msa0979510 | 0.821346 | 4.238975e-53 | -8.615850e-47 |
| Msa0716450 | Msa0980440 | 0.807269 | 5.489102e-50 | -8.615850e-47 |
| Msa0716450 | Msa0981000 | 0.801048 | 1.082180e-48 | -8.615850e-47 |
| Msa0716450 | Msa0981010 | 0.862792 | 3.944193e-64 | -8.615850e-47 |
| Msa0716450 | Msa0999040 | 0.802307 | 5.968462e-49 | -8.615850e-47 |
| Msa0716450 | Msa1001770 | 0.811064 | 8.436988e-51 | -8.615850e-47 |
| Msa0716450 | Msa1002620 | 0.927423 | 1.199329e-91 | -8.615850e-47 |
| Msa0716450 | Msa1007610 | -0.832745 | 7.932981e-56 | -8.615850e-47 |
| Msa0716450 | Msa1008490 | 0.811744 | 6.007604e-51 | -8.615850e-47 |
| Msa0716450 | Msa1009000 | 0.824450 | 8.020654e-54 | -8.615850e-47 |
| Msa0716450 | Msa1010110 | 0.810362 | 1.196992e-50 | -8.615850e-47 |
| Msa0716450 | Msa1019020 | 0.810688 | 1.017786e-50 | -8.615850e-47 |
| Msa0716450 | Msa1020720 | 0.820476 | 6.722755e-53 | -8.615850e-47 |
| Msa0716450 | Msa1033560 | 0.846758 | 1.776256e-59 | -8.615850e-47 |
| Msa0716450 | Msa1055260 | 0.818485 | 1.913044e-52 | -8.615850e-47 |
| Msa0716450 | Msa1055280 | 0.834475 | 2.932964e-56 | -8.615850e-47 |
| Msa0716450 | Msa1069100 | 0.827011 | 1.980053e-54 | -8.615850e-47 |
| Msa0716450 | Msa1073340 | 0.826449 | 2.695794e-54 | -8.615850e-47 |
| Msa0716450 | Msa1073350 | 0.816791 | 4.608471e-52 | -8.615850e-47 |
| Msa0716450 | Msa1081600 | 0.800348 | 1.502998e-48 | -8.615850e-47 |
| Msa0716450 | Msa1083150 | 0.818477 | 1.920762e-52 | -8.615850e-47 |
| Msa0716450 | Msa1098560 | 0.836044 | 1.178218e-56 | -8.615850e-47 |
| Msa0716450 | Msa1113850 | 0.865603 | 5.239152e-65 | -8.615850e-47 |
| Msa0716450 | Msa1124680 | -0.800714 | 1.265886e-48 | -8.615850e-47 |
| Msa0716450 | Msa1125760 | 0.808620 | 2.832487e-50 | -8.615850e-47 |
| Msa0716450 | Msa1130270 | -0.808158 | 3.553587e-50 | -8.615850e-47 |
| Msa0716450 | Msa1139410 | 0.810059 | 1.391026e-50 | -8.615850e-47 |
| Msa0716450 | Msa1139810 | 0.809346 | 1.980057e-50 | -8.615850e-47 |
| Msa0716450 | Msa1145250 | -0.800885 | 1.168499e-48 | -8.615850e-47 |
| Msa0716450 | Msa1147570 | 0.808753 | 2.652652e-50 | -8.615850e-47 |
| Msa0716450 | Msa1160400 | 0.848339 | 6.529773e-60 | -8.615850e-47 |
| Msa0716450 | Msa1172450 | 0.816966 | 4.211246e-52 | -8.615850e-47 |
| Msa0716450 | Msa1172670 | 0.819923 | 9.000946e-53 | -8.615850e-47 |
| Msa0716450 | Msa1179460 | 0.825192 | 5.358969e-54 | -8.615850e-47 |
| Msa0716450 | Msa1190120 | 0.837317 | 5.582372e-57 | -8.615850e-47 |
| Msa0716450 | Msa1197590 | 0.853183 | 2.828130e-61 | -8.615850e-47 |
| Msa0716450 | Msa1201890 | 0.801927 | 7.146773e-49 | -8.615850e-47 |
| Msa0716450 | Msa1203000 | 0.885619 | 6.957870e-72 | -8.615850e-47 |
| Msa0716450 | Msa1204120 | 0.826217 | 3.061394e-54 | -8.615850e-47 |
| Msa0716450 | Msa1205010 | -0.801682 | 8.024123e-49 | -8.615850e-47 |
| Msa0716450 | Msa1205960 | 0.800839 | 1.193838e-48 | -8.615850e-47 |
| Msa0716450 | Msa1211550 | 0.864462 | 1.194890e-64 | -8.615850e-47 |
| Msa0716450 | Msa1217860 | 0.801908 | 7.211899e-49 | -8.615850e-47 |
| Msa0716450 | Msa1217940 | 0.844369 | 7.888627e-59 | -8.615850e-47 |
| Msa0716450 | Msa1218480 | 0.835347 | 1.768916e-56 | -8.615850e-47 |
| Msa0716450 | Msa1219260 | 0.885194 | 1.002993e-71 | -8.615850e-47 |
| Msa0716450 | Msa1220230 | 0.837238 | 5.849203e-57 | -8.615850e-47 |
| Msa0716450 | Msa1222970 | 0.820287 | 7.427938e-53 | -8.615850e-47 |
| Msa0716450 | Msa1227950 | 0.869112 | 3.952546e-66 | -8.615850e-47 |
| Msa0716450 | Msa1227970 | 0.876435 | 1.399293e-68 | -8.615850e-47 |
| Msa0716450 | Msa1228210 | 0.815287 | 9.987239e-52 | -8.615850e-47 |
| Msa0716450 | Msa1240310 | 0.804422 | 2.176971e-49 | -8.615850e-47 |
| Msa0716450 | Msa1254700 | 0.848336 | 6.540389e-60 | -8.615850e-47 |
| Msa0716450 | Msa1255280 | 0.868584 | 5.859076e-66 | -8.615850e-47 |
| Msa0716450 | Msa1258050 | 0.842837 | 2.026380e-58 | -8.615850e-47 |
| Msa0716450 | Msa1264020 | 0.807597 | 4.677002e-50 | -8.615850e-47 |
| Msa0716450 | Msa1265960 | 0.834457 | 2.964413e-56 | -8.615850e-47 |
| Msa0716450 | Msa1266960 | 0.891635 | 3.316612e-74 | -8.615850e-47 |
| Msa0716450 | Msa1269580 | -0.807894 | 4.044537e-50 | -8.615850e-47 |
| Msa0716450 | Msa1271280 | 0.813477 | 2.509410e-51 | -8.615850e-47 |
| Msa0716450 | Msa1271300 | 0.828815 | 7.290380e-55 | -8.615850e-47 |
| Msa0716450 | Msa1281720 | 0.800157 | 1.643826e-48 | -8.615850e-47 |
| Msa0716450 | Msa1289280 | 0.809548 | 1.792291e-50 | -8.615850e-47 |
| Msa0716450 | Msa1291870 | 0.848967 | 4.371242e-60 | -8.615850e-47 |
| Msa0716450 | Msa1293770 | 0.801939 | 7.106562e-49 | -8.615850e-47 |
| Msa0716450 | Msa1296960 | -0.807498 | 4.909174e-50 | -8.615850e-47 |
| Msa0716450 | Msa1308130 | 0.830039 | 3.676278e-55 | -8.615850e-47 |
| Msa0716450 | Msa1320740 | 0.800656 | 1.300904e-48 | -8.615850e-47 |
| Msa0716450 | Msa1321000 | 0.811923 | 5.490108e-51 | -8.615850e-47 |
| Msa0716450 | Msa1322860 | 0.803425 | 3.508184e-49 | -8.615850e-47 |
| Msa0716450 | Msa1323190 | 0.810060 | 1.390871e-50 | -8.615850e-47 |
| Msa0716450 | Msa1327320 | 0.825592 | 4.310293e-54 | -8.615850e-47 |
| Msa0716450 | Msa1329920 | 0.832986 | 6.909154e-56 | -8.615850e-47 |
| Msa0716450 | Msa1329990 | 0.814427 | 1.549054e-51 | -8.615850e-47 |
| Msa0716450 | Msa1331910 | 0.800279 | 1.553024e-48 | -8.615850e-47 |
| Msa0716450 | Msa1331920 | 0.809761 | 1.613018e-50 | -8.615850e-47 |
| Msa0716450 | Msa1339940 | 0.860509 | 1.966308e-63 | -8.615850e-47 |
| Msa0716450 | Msa1342430 | 0.813034 | 3.138765e-51 | -8.615850e-47 |
| Msa0716450 | Msa1343820 | 0.824810 | 6.597654e-54 | -8.615850e-47 |
| Msa0716450 | Msa1345420 | 0.819475 | 1.139244e-52 | -8.615850e-47 |
| Msa0716450 | Msa1355260 | 0.807993 | 3.853475e-50 | -8.615850e-47 |
| Msa0716450 | Msa1363890 | 0.816588 | 5.119352e-52 | -8.615850e-47 |
| Msa0716450 | Msa1365040 | -0.800842 | 1.191944e-48 | -8.615850e-47 |
| Msa0716450 | Msa1367080 | 0.815681 | 8.160194e-52 | -8.615850e-47 |
| Msa0716450 | Msa1369700 | 0.877106 | 8.198854e-69 | -8.615850e-47 |
| Msa0716450 | Msa1381140 | 0.804977 | 1.666892e-49 | -8.615850e-47 |
| Msa0716450 | Msa1385620 | 0.825941 | 3.560932e-54 | -8.615850e-47 |
| Msa0716450 | Msa1390310 | 0.812677 | 3.758674e-51 | -8.615850e-47 |
| Msa0716450 | Msa1395870 | 0.854067 | 1.575440e-61 | -8.615850e-47 |
| Msa0716450 | Msa1397250 | 0.851807 | 6.978361e-61 | -8.615850e-47 |
| Msa0716450 | Msa1399560 | 0.888602 | 5.104335e-73 | -8.615850e-47 |
| Msa0716450 | Msa1401150 | 0.837607 | 4.703014e-57 | -8.615850e-47 |
| Msa0716450 | Msa1405180 | 0.835089 | 2.055341e-56 | -8.615850e-47 |
| Msa0716450 | Msa1414740 | 0.803898 | 2.797694e-49 | -8.615850e-47 |
| Msa0716450 | Msa1420060 | 0.814729 | 1.328412e-51 | -8.615850e-47 |
| Msa0716450 | Msa1423450 | 0.825633 | 4.213810e-54 | -8.615850e-47 |
| Msa0716450 | Msa1425010 | 0.817560 | 3.096047e-52 | -8.615850e-47 |
| Msa0716450 | Msa1427760 | 0.808842 | 2.539204e-50 | -8.615850e-47 |
| Msa0716450 | Msa1429250 | 0.817994 | 2.469836e-52 | -8.615850e-47 |
| Msa0716450 | Msa1429360 | -0.807234 | 5.584612e-50 | -8.615850e-47 |
| Msa0716450 | Msa1429420 | 0.817289 | 3.561931e-52 | -8.615850e-47 |
| Msa0716450 | Msa1431000 | 0.839233 | 1.791419e-57 | -8.615850e-47 |
| Msa0716450 | Msa1437190 | 0.883573 | 4.001456e-71 | -8.615850e-47 |
| Msa0716450 | Msa1438250 | 0.803692 | 3.088055e-49 | -8.615850e-47 |
| Msa0716450 | Msa1440340 | 0.830590 | 2.695724e-55 | -8.615850e-47 |
| Msa0716450 | Msa1443840 | 0.883812 | 3.268705e-71 | -8.615850e-47 |
| Msa0716450 | Msa1449730 | 0.824639 | 7.237414e-54 | -8.615850e-47 |
| Msa0716450 | Msa1452060 | 0.856498 | 3.089918e-62 | -8.615850e-47 |
| Msa0716450 | Msa1453710 | 0.800465 | 1.423250e-48 | -8.615850e-47 |
| Msa0716450 | Msa1457670 | -0.813526 | 2.448002e-51 | -8.615850e-47 |
| Msa0716450 | Msa1460380 | 0.893704 | 4.903931e-75 | -8.615850e-47 |
| Msa0716450 | Msa1460890 | 0.810357 | 1.199747e-50 | -8.615850e-47 |
| Msa0716450 | Msa1464560 | 0.801350 | 9.385973e-49 | -8.615850e-47 |
| Msa0130570 | Msa0716450 | 0.804959 | 1.681367e-49 | -8.615850e-47 |
| Msa0140780 | Msa0716450 | 0.821005 | 5.082233e-53 | -8.615850e-47 |
| Msa0141100 | Msa0716450 | 0.904816 | 8.258489e-80 | -8.615850e-47 |
| Msa0145670 | Msa0716450 | 0.820276 | 7.472619e-53 | -8.615850e-47 |
| Msa0148340 | Msa0716450 | 0.821566 | 3.771567e-53 | -8.615850e-47 |
| Msa0149560 | Msa0716450 | 0.818296 | 2.110499e-52 | -8.615850e-47 |
| Msa0153420 | Msa0716450 | 0.829317 | 5.507359e-55 | -8.615850e-47 |
| Msa0157290 | Msa0716450 | 0.832094 | 1.149720e-55 | -8.615850e-47 |
| Msa0161680 | Msa0716450 | 0.805112 | 1.561893e-49 | -8.615850e-47 |
| Msa0163980 | Msa0716450 | 0.812591 | 3.924842e-51 | -8.615850e-47 |
| Msa0168100 | Msa0716450 | 0.807762 | 4.314566e-50 | -8.615850e-47 |
| Msa0172350 | Msa0716450 | 0.823494 | 1.344007e-53 | -8.615850e-47 |
| Msa0183750 | Msa0716450 | 0.887655 | 1.179413e-72 | -8.615850e-47 |
| Msa0185380 | Msa0716450 | 0.810075 | 1.380094e-50 | -8.615850e-47 |
| Msa0185480 | Msa0716450 | 0.830287 | 3.197823e-55 | -8.615850e-47 |
| Msa0185640 | Msa0716450 | -0.801237 | 9.898363e-49 | -8.615850e-47 |
| Msa0191040 | Msa0716450 | 0.865427 | 5.953126e-65 | -8.615850e-47 |
| Msa0191250 | Msa0716450 | 0.813471 | 2.517378e-51 | -8.615850e-47 |
| Msa0197930 | Msa0716450 | 0.815837 | 7.532198e-52 | -8.615850e-47 |
| Msa0200260 | Msa0716450 | 0.826062 | 3.333186e-54 | -8.615850e-47 |
| Msa0203030 | Msa0716450 | 0.815856 | 7.461064e-52 | -8.615850e-47 |
| Msa0203640 | Msa0716450 | 0.819419 | 1.173301e-52 | -8.615850e-47 |
| Msa0206800 | Msa0716450 | 0.821691 | 3.528968e-53 | -8.615850e-47 |
| Msa0219190 | Msa0716450 | 0.804961 | 1.679989e-49 | -8.615850e-47 |
| Msa0220300 | Msa0716450 | 0.867373 | 1.435402e-65 | -8.615850e-47 |
| Msa0225600 | Msa0716450 | 0.835085 | 2.060062e-56 | -8.615850e-47 |
| Msa0233340 | Msa0716450 | 0.865424 | 5.965963e-65 | -8.615850e-47 |
| Msa0236110 | Msa0716450 | 0.803888 | 2.811015e-49 | -8.615850e-47 |
| Msa0369570 | Msa0716450 | 0.807854 | 4.123743e-50 | -8.615850e-47 |
| Msa0371540 | Msa0716450 | 0.816949 | 4.247059e-52 | -8.615850e-47 |
| Msa0374850 | Msa0716450 | 0.906853 | 9.512122e-81 | -8.615850e-47 |
| Msa0375090 | Msa0716450 | 0.899317 | 2.234677e-77 | -8.615850e-47 |
| Msa0385670 | Msa0716450 | 0.827917 | 1.200531e-54 | -8.615850e-47 |
| Msa0407920 | Msa0716450 | 0.819920 | 9.016143e-53 | -8.615850e-47 |
| Msa0418000 | Msa0716450 | 0.830601 | 2.678706e-55 | -8.615850e-47 |
| Msa0419820 | Msa0716450 | 0.837151 | 6.154400e-57 | -8.615850e-47 |
| Msa0423360 | Msa0716450 | -0.834834 | 2.383764e-56 | -8.615850e-47 |
| Msa0426360 | Msa0716450 | 0.803263 | 3.790065e-49 | -8.615850e-47 |
| Msa0426400 | Msa0716450 | 0.804774 | 1.837860e-49 | -8.615850e-47 |
| Msa0435670 | Msa0716450 | 0.818020 | 2.436759e-52 | -8.615850e-47 |
| Msa0436280 | Msa0716450 | -0.805768 | 1.137999e-49 | -8.615850e-47 |
| Msa0437710 | Msa0716450 | 0.819443 | 1.158373e-52 | -8.615850e-47 |
| Msa0466060 | Msa0716450 | 0.801365 | 9.319245e-49 | -8.615850e-47 |
| Msa0470340 | Msa0716450 | 0.882667 | 8.597499e-71 | -8.615850e-47 |
| Msa0470860 | Msa0716450 | 0.858960 | 5.751853e-63 | -8.615850e-47 |
| Msa0479680 | Msa0716450 | 0.800366 | 1.490496e-48 | -8.615850e-47 |
| Msa0479700 | Msa0716450 | 0.804210 | 2.409829e-49 | -8.615850e-47 |
| Msa0480950 | Msa0716450 | 0.855567 | 5.785776e-62 | -8.615850e-47 |
| Msa0481110 | Msa0716450 | 0.838981 | 2.081704e-57 | -8.615850e-47 |
| Msa0239130 | Msa0716450 | 0.823788 | 1.147093e-53 | -8.615850e-47 |
| Msa0243100 | Msa0716450 | 0.825308 | 5.031297e-54 | -8.615850e-47 |
| Msa0246430 | Msa0716450 | 0.802517 | 5.404560e-49 | -8.615850e-47 |
| Msa0251240 | Msa0716450 | 0.854457 | 1.215007e-61 | -8.615850e-47 |
| Msa0257250 | Msa0716450 | 0.806505 | 7.961104e-50 | -8.615850e-47 |
| Msa0257680 | Msa0716450 | 0.804731 | 1.876962e-49 | -8.615850e-47 |
| Msa0258760 | Msa0716450 | 0.803276 | 3.766319e-49 | -8.615850e-47 |
| Msa0260820 | Msa0716450 | -0.800404 | 1.464340e-48 | -8.615850e-47 |
| Msa0265820 | Msa0716450 | 0.804388 | 2.213008e-49 | -8.615850e-47 |
| Msa0266450 | Msa0716450 | 0.840356 | 9.135053e-58 | -8.615850e-47 |
| Msa0267760 | Msa0716450 | 0.823408 | 1.407556e-53 | -8.615850e-47 |
| Msa0282210 | Msa0716450 | 0.805290 | 1.433558e-49 | -8.615850e-47 |
| Msa0287650 | Msa0716450 | 0.817181 | 3.767267e-52 | -8.615850e-47 |
| Msa0288190 | Msa0716450 | 0.813276 | 2.778739e-51 | -8.615850e-47 |
| Msa0288200 | Msa0716450 | 0.821573 | 3.757835e-53 | -8.615850e-47 |
| Msa0290010 | Msa0716450 | 0.818792 | 1.628988e-52 | -8.615850e-47 |
| Msa0296560 | Msa0716450 | 0.801987 | 6.946213e-49 | -8.615850e-47 |
| Msa0309080 | Msa0716450 | -0.807073 | 6.040893e-50 | -8.615850e-47 |
| Msa0311690 | Msa0716450 | 0.854226 | 1.416877e-61 | -8.615850e-47 |
| Msa0314630 | Msa0716450 | 0.803728 | 3.035124e-49 | -8.615850e-47 |
| Msa0315250 | Msa0716450 | 0.839241 | 1.782535e-57 | -8.615850e-47 |
| Msa0316850 | Msa0716450 | 0.826086 | 3.290776e-54 | -8.615850e-47 |
| Msa0317280 | Msa0716450 | 0.802357 | 5.830644e-49 | -8.615850e-47 |
| Msa0326540 | Msa0716450 | 0.832542 | 8.909242e-56 | -8.615850e-47 |
| Msa0334500 | Msa0716450 | 0.815762 | 7.830307e-52 | -8.615850e-47 |
| Msa0484780 | Msa0716450 | 0.800430 | 1.446717e-48 | -8.615850e-47 |
| Msa0503580 | Msa0716450 | 0.808891 | 2.478989e-50 | -8.615850e-47 |
| Msa0505360 | Msa0716450 | 0.810344 | 1.207643e-50 | -8.615850e-47 |
| Msa0509970 | Msa0716450 | 0.817025 | 4.083248e-52 | -8.615850e-47 |
| Msa0517340 | Msa0716450 | 0.814843 | 1.253053e-51 | -8.615850e-47 |
| Msa0520510 | Msa0716450 | 0.823164 | 1.605014e-53 | -8.615850e-47 |
| Msa0526710 | Msa0716450 | 0.818447 | 1.951349e-52 | -8.615850e-47 |
| Msa0531430 | Msa0716450 | 0.905710 | 3.218727e-80 | -8.615850e-47 |
| Msa0534570 | Msa0716450 | 0.843245 | 1.577538e-58 | -8.615850e-47 |
| Msa0534590 | Msa0716450 | 0.889766 | 1.804707e-73 | -8.615850e-47 |
| Msa0546380 | Msa0716450 | 0.811055 | 8.475581e-51 | -8.615850e-47 |
| Msa0557680 | Msa0716450 | 0.814531 | 1.469099e-51 | -8.615850e-47 |
| Msa0565600 | Msa0716450 | 0.868179 | 7.911394e-66 | -8.615850e-47 |
| Msa0581760 | Msa0716450 | 0.817133 | 3.861801e-52 | -8.615850e-47 |
| Msa0590800 | Msa0716450 | 0.875513 | 2.904196e-68 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0716450 | MtrunA17_Chr5g0403901 | 95.319 | 470 | 16 | 1 | 1 | 464 | 1 | 470 | 0.0 | 900 |
| Msa0716450 | MtrunA17_Chr8g0373471 | 72.458 | 472 | 110 | 4 | 1 | 464 | 8 | 467 | 0.0 | 629 |
| Msa0716450 | MtrunA17_Chr3g0139541 | 63.974 | 458 | 156 | 5 | 12 | 462 | 11 | 466 | 0.0 | 552 |
| Msa0716450 | MtrunA17_Chr8g0380211 | 60.909 | 440 | 153 | 4 | 34 | 463 | 46 | 476 | 1.04e-153 | 445 |
| Msa0716450 | MtrunA17_Chr1g0157751 | 50.216 | 462 | 206 | 6 | 11 | 462 | 8 | 455 | 3.08e-143 | 417 |
| Msa0716450 | MtrunA17_Chr7g0265481 | 52.542 | 413 | 182 | 4 | 64 | 464 | 51 | 461 | 6.53e-127 | 376 |
| Msa0716450 | MtrunA17_Chr8g0380191 | 58.235 | 340 | 107 | 2 | 123 | 462 | 10 | 314 | 3.40e-122 | 359 |
| Msa0716450 | MtrunA17_Chr1g0179621 | 50.602 | 415 | 193 | 2 | 61 | 463 | 49 | 463 | 1.91e-121 | 362 |
| Msa0716450 | MtrunA17_Chr2g0280401 | 28.093 | 388 | 245 | 9 | 101 | 462 | 87 | 466 | 2.09e-39 | 148 |
| Msa0716450 | MtrunA17_Chr3g0139621 | 47.458 | 118 | 40 | 1 | 297 | 392 | 27 | 144 | 3.79e-20 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0716450 | AT2G25737.1 | 62.393 | 468 | 160 | 5 | 10 | 462 | 6 | 472 | 0.0 | 543 |
| Msa0716450 | AT2G25737.2 | 62.997 | 327 | 114 | 3 | 41 | 361 | 46 | 371 | 1.97e-132 | 387 |
| Msa0716450 | AT2G36630.1 | 50.835 | 419 | 192 | 3 | 58 | 464 | 42 | 458 | 4.58e-125 | 372 |
| Msa0716450 | AT1G11540.2 | 33.911 | 404 | 240 | 6 | 77 | 462 | 56 | 450 | 7.95e-49 | 173 |
| Msa0716450 | AT1G11540.1 | 33.511 | 376 | 223 | 6 | 105 | 462 | 1 | 367 | 1.91e-48 | 170 |
| Msa0716450 | AT1G61740.1 | 29.087 | 416 | 266 | 8 | 68 | 462 | 51 | 458 | 4.48e-42 | 155 |
| Msa0716450 | AT4G21250.1 | 30.549 | 419 | 246 | 7 | 69 | 462 | 51 | 449 | 5.97e-42 | 155 |
| Msa0716450 | AT4G21260.1 | 26.000 | 450 | 267 | 9 | 13 | 462 | 10 | 393 | 4.33e-33 | 129 |
Find 118 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAATTTGCTTGAATGAAAA+TGG | 0.143442 | 5_1:-9887505 | None:intergenic |
| TCTAGGAGGTGGCTTCATTT+TGG | 0.160113 | 5_1:+9885242 | Msa0716450:CDS |
| TATCACTTCTTGTCTATGTT+TGG | 0.210505 | 5_1:+9884574 | Msa0716450:CDS |
| CTTTGCTAAAGAACGTTTAT+TGG | 0.212510 | 5_1:+9884544 | Msa0716450:CDS |
| GAGCAGTGGTTGATTTCTTA+TGG | 0.221654 | 5_1:+9882804 | Msa0716450:CDS |
| GATAATTGCAGGTATGATTA+TGG | 0.245947 | 5_1:+9883309 | Msa0716450:intron |
| CCTATGCTTGCTTTGATCAT+TGG | 0.246443 | 5_1:+9883099 | Msa0716450:CDS |
| GTTGGAAAATCATGAGTATA+TGG | 0.251481 | 5_1:+9887378 | Msa0716450:CDS |
| GCAAAATATAAAATAAATTA+AGG | 0.262013 | 5_1:-9887553 | None:intergenic |
| ATCACTTCTTGTCTATGTTT+GGG | 0.273401 | 5_1:+9884575 | Msa0716450:CDS |
| AGGCATAAATACATGGAAAA+AGG | 0.303982 | 5_1:+9883938 | Msa0716450:CDS |
| ACACATGGCAACAAAATCTT+TGG | 0.304038 | 5_1:+9882655 | Msa0716450:exon |
| GGGGCCACTGTTTCTAGAAA+TGG | 0.317544 | 5_1:+9885263 | Msa0716450:CDS |
| TTGGATTCTTAATTTCTTGC+AGG | 0.323072 | 5_1:+9884962 | Msa0716450:CDS |
| AAAGGAAACAATGTTGAAAA+AGG | 0.328619 | 5_1:+9883956 | Msa0716450:CDS |
| AGCAGGAAATGAAATTTGAT+TGG | 0.335221 | 5_1:+9882992 | Msa0716450:intron |
| GCCACTTATAGATTATGATT+TGG | 0.337334 | 5_1:+9883390 | Msa0716450:CDS |
| TGCAGCTTCATACTTTGTTT+TGG | 0.337370 | 5_1:+9887091 | Msa0716450:intron |
| TTACTCATCATCTTATTCAT+AGG | 0.345297 | 5_1:+9883499 | Msa0716450:CDS |
| AGAGAACATGATTGTGAAGT+TGG | 0.357557 | 5_1:+9887360 | Msa0716450:CDS |
| TTCATAAGTGCAATCAGTTT+AGG | 0.367029 | 5_1:+9887215 | Msa0716450:CDS |
| ATTTGATTGGAAAATTATAG+TGG | 0.373846 | 5_1:+9883005 | Msa0716450:CDS |
| TCTTTCTCAACAAACTTTGC+CGG | 0.376886 | 5_1:-9882764 | None:intergenic |
| GTTGGAGGGTTGCTTGGTCT+AGG | 0.378397 | 5_1:+9885225 | Msa0716450:CDS |
| GCAACCATAGCTGCATTTGC+TGG | 0.378940 | 5_1:+9887116 | Msa0716450:CDS |
| GGTATGGTTGGAGGGTTGCT+TGG | 0.380908 | 5_1:+9885219 | Msa0716450:CDS |
| TGTATTTCACCTGGACCCTT+TGG | 0.393240 | 5_1:-9884413 | None:intergenic |
| CAACTGTTTACTACAATATG+AGG | 0.399306 | 5_1:+9883344 | Msa0716450:CDS |
| TTGGGAAGTGTTGGAGGTGT+AGG | 0.403654 | 5_1:+9883057 | Msa0716450:CDS |
| GGGCCACTGTTTCTAGAAAT+GGG | 0.411280 | 5_1:+9885264 | Msa0716450:CDS |
| CACAAACTTACACTTGGAAA+TGG | 0.417080 | 5_1:-9883145 | None:intergenic |
| ATAATTGCAGGTATGATTAT+GGG | 0.421533 | 5_1:+9883310 | Msa0716450:intron |
| TGGTTCTTCTTCCAACTGCT+TGG | 0.423091 | 5_1:-9884072 | None:intergenic |
| AGCAGTGGTTGATTTCTTAT+GGG | 0.424588 | 5_1:+9882805 | Msa0716450:CDS |
| ATGTGGAGTAATGGCTGGTA+TGG | 0.429546 | 5_1:+9885203 | Msa0716450:CDS |
| AGACTTGCTCCATTGAGTAT+TGG | 0.430494 | 5_1:+9884943 | Msa0716450:CDS |
| TCTAATTGTTCAGATTGTTA+AGG | 0.430792 | 5_1:+9884605 | Msa0716450:CDS |
| TTCCAGCCTATGCTGATGCT+TGG | 0.432303 | 5_1:+9883421 | Msa0716450:CDS |
| GGAGCAGCTTTGGGAAGTGT+TGG | 0.434741 | 5_1:+9883048 | Msa0716450:CDS |
| GTAATGTCATGTTTGCTGAT+TGG | 0.440823 | 5_1:+9883464 | Msa0716450:CDS |
| GATCGCTTCCCCGTACCTTA+CGG | 0.441861 | 5_1:+9886805 | Msa0716450:CDS |
| ACTGTAACAGAGATAGCAAT+AGG | 0.442311 | 5_1:-9885081 | None:intergenic |
| TTCACCTGGACCCTTTGGTA+GGG | 0.442360 | 5_1:-9884408 | None:intergenic |
| GTTGATTTCTTATGGGAAAG+TGG | 0.442564 | 5_1:+9882812 | Msa0716450:CDS |
| TTGGAAAATCATGAGTATAT+GGG | 0.442966 | 5_1:+9887379 | Msa0716450:CDS |
| GTAATGGCTGGTATGGTTGG+AGG | 0.443896 | 5_1:+9885210 | Msa0716450:CDS |
| GGGTTGCTTGGTCTAGGAGG+TGG | 0.445245 | 5_1:+9885231 | Msa0716450:CDS |
| AACTATTTACCGTAAGGTAC+GGG | 0.449928 | 5_1:-9886814 | None:intergenic |
| TAAGTGGCATGTCTAGTGTT+GGG | 0.453765 | 5_1:-9883375 | None:intergenic |
| AGTCTTCATATGAACCTGTT+TGG | 0.458365 | 5_1:+9882837 | Msa0716450:CDS |
| GGAAGTGTTGGAGGTGTAGG+AGG | 0.462071 | 5_1:+9883060 | Msa0716450:CDS |
| TTTCACCTGGACCCTTTGGT+AGG | 0.464163 | 5_1:-9884409 | None:intergenic |
| GTTGGAGGTGTAGGAGGTGG+TGG | 0.466176 | 5_1:+9883066 | Msa0716450:CDS |
| TATGAACTCACAGGCCAAAC+AGG | 0.469346 | 5_1:-9882851 | None:intergenic |
| GGAGTAATGGCTGGTATGGT+TGG | 0.469457 | 5_1:+9885207 | Msa0716450:CDS |
| TCACCTGGACCCTTTGGTAG+GGG | 0.471023 | 5_1:-9884407 | None:intergenic |
| AACAAGAGTGATTAAATCAA+AGG | 0.473487 | 5_1:+9885131 | Msa0716450:CDS |
| TGCTTGAATGAAAATGGAAT+AGG | 0.480466 | 5_1:-9887499 | None:intergenic |
| TAATGGCTGGTATGGTTGGA+GGG | 0.480577 | 5_1:+9885211 | Msa0716450:CDS |
| GCAGCTTTGGGAAGTGTTGG+AGG | 0.480835 | 5_1:+9883051 | Msa0716450:CDS |
| TTTGTTGAGAAAGAAACAAA+AGG | 0.481024 | 5_1:+9882773 | Msa0716450:CDS |
| ATTATAGTGGGATCAATCGT+TGG | 0.490378 | 5_1:+9883018 | Msa0716450:CDS |
| TCTTTGCACTCAATAAGCTT+AGG | 0.491284 | 5_1:+9887411 | Msa0716450:exon |
| AGTGTTGGAGGTGTAGGAGG+TGG | 0.493934 | 5_1:+9883063 | Msa0716450:CDS |
| GGAAATGGCTGTAGAAGACT+TGG | 0.494754 | 5_1:-9883130 | None:intergenic |
| GCCAAATCATAATCTATAAG+TGG | 0.496380 | 5_1:-9883391 | None:intergenic |
| GAAACTAGGGATGGAAATCT+AGG | 0.499716 | 5_1:-9882623 | None:intergenic |
| ATTAAGAATCCAATACTCAA+TGG | 0.501230 | 5_1:-9884952 | None:intergenic |
| CAATAAACGTTCTTTAGCAA+AGG | 0.506582 | 5_1:-9884543 | None:intergenic |
| ACAAGAGTGATTAAATCAAA+GGG | 0.507110 | 5_1:+9885132 | Msa0716450:CDS |
| AACAATCTGAACAATTAGAA+AGG | 0.520405 | 5_1:-9884601 | None:intergenic |
| TTCCAAGCATCAGCATAGGC+TGG | 0.520792 | 5_1:-9883423 | None:intergenic |
| CTGATGCTTGGAATAAGTAT+TGG | 0.521464 | 5_1:+9883433 | Msa0716450:CDS |
| AGAAGGATAATTGCAATCCT+TGG | 0.524746 | 5_1:+9887152 | Msa0716450:CDS |
| TTGTGTATCACAGGTGGAGT+AGG | 0.524929 | 5_1:+9887334 | Msa0716450:intron |
| ACTTCTTGTCTATGTTTGGG+TGG | 0.527940 | 5_1:+9884578 | Msa0716450:CDS |
| ACTGATTGCACTTATGAAGA+TGG | 0.531468 | 5_1:-9887210 | None:intergenic |
| CTGGCCAGCAAATGCAGCTA+TGG | 0.531946 | 5_1:-9887120 | None:intergenic |
| ATAAGTGGCATGTCTAGTGT+TGG | 0.532797 | 5_1:-9883376 | None:intergenic |
| TTTGATTGGAAAATTATAGT+GGG | 0.535494 | 5_1:+9883006 | Msa0716450:CDS |
| ACTTCATCTTGTATTTCACC+TGG | 0.537361 | 5_1:-9884422 | None:intergenic |
| GGAGGGTTGCTTGGTCTAGG+AGG | 0.540261 | 5_1:+9885228 | Msa0716450:CDS |
| ATATTGTTTATGTGGAGTAA+TGG | 0.540286 | 5_1:+9885194 | Msa0716450:CDS |
| AAACTATTTACCGTAAGGTA+CGG | 0.540610 | 5_1:-9886815 | None:intergenic |
| GACTACAAGCCCCTACCAAA+GGG | 0.543521 | 5_1:+9884398 | Msa0716450:CDS |
| GCAGGAAGCAGCCAAGCAGT+TGG | 0.548673 | 5_1:+9884061 | Msa0716450:intron |
| TGCATTTGCTGGCCAGCATG+TGG | 0.549794 | 5_1:+9887127 | Msa0716450:CDS |
| TATTCAAAGGCATAAATACA+TGG | 0.555159 | 5_1:+9883931 | Msa0716450:CDS |
| TGGAAAATCATGAGTATATG+GGG | 0.558196 | 5_1:+9887380 | Msa0716450:CDS |
| TGTCATGTTTGCTGATTGGA+TGG | 0.558982 | 5_1:+9883468 | Msa0716450:CDS |
| AAGCCCCTACCAAAGGGTCC+AGG | 0.559115 | 5_1:+9884404 | Msa0716450:CDS |
| CCAATGATCAAAGCAAGCAT+AGG | 0.560848 | 5_1:-9883099 | None:intergenic |
| AGTGATTAAATCAAAGGGAA+AGG | 0.562365 | 5_1:+9885137 | Msa0716450:CDS |
| TTATCCTTCTCACCACATGC+TGG | 0.565982 | 5_1:-9887139 | None:intergenic |
| CAATGATCAAAGCAAGCATA+GGG | 0.568436 | 5_1:-9883098 | None:intergenic |
| AGGTGAAATACAAGATGAAG+TGG | 0.578510 | 5_1:+9884424 | Msa0716450:CDS |
| GTGTGGAATGTGAGAAACTA+GGG | 0.584055 | 5_1:-9882636 | None:intergenic |
| TCAACAAAAGCATTATTCAA+AGG | 0.585877 | 5_1:+9883918 | Msa0716450:CDS |
| TGTTTATGTGGAGTAATGGC+TGG | 0.586217 | 5_1:+9885198 | Msa0716450:CDS |
| AGAAATGGGAATTCCTCCGC+AGG | 0.587719 | 5_1:+9885278 | Msa0716450:CDS |
| TTCTACGAAGTATACAGTTG+AGG | 0.601952 | 5_1:-9882527 | None:intergenic |
| AGACTACAAGCCCCTACCAA+AGG | 0.602171 | 5_1:+9884397 | Msa0716450:CDS |
| AAAAGGATTTCTAAGAGCAG+TGG | 0.604558 | 5_1:+9882790 | Msa0716450:CDS |
| CTGGCCAGCATGTGGTGAGA+AGG | 0.606592 | 5_1:+9887135 | Msa0716450:CDS |
| CTTATTCCAAGCATCAGCAT+AGG | 0.609800 | 5_1:-9883427 | None:intergenic |
| ACGAAGTATACAGTTGAGGA+AGG | 0.611253 | 5_1:-9882523 | None:intergenic |
| CTTTGGTTACTGCAGCAACA+TGG | 0.613177 | 5_1:+9882672 | Msa0716450:CDS |
| GAAGCTGTATGCATATACAA+AGG | 0.625248 | 5_1:+9885108 | Msa0716450:CDS |
| TAATAATTGATGCACGACCA+AGG | 0.625797 | 5_1:-9887169 | None:intergenic |
| ATATTGAACTACCGACATAG+AGG | 0.628296 | 5_1:-9886773 | None:intergenic |
| TGTGTGGAATGTGAGAAACT+AGG | 0.636976 | 5_1:-9882637 | None:intergenic |
| ATTCCCATTTCTAGAAACAG+TGG | 0.643732 | 5_1:-9885267 | None:intergenic |
| AGTTTCTCACATTCCACACA+TGG | 0.645028 | 5_1:+9882640 | Msa0716450:exon |
| GAAATGGCTGTAGAAGACTT+GGG | 0.659724 | 5_1:-9883129 | None:intergenic |
| TATGAAGAGTGTACCTGCGG+AGG | 0.676375 | 5_1:-9885291 | None:intergenic |
| ACTATTTACCGTAAGGTACG+GGG | 0.686757 | 5_1:-9886813 | None:intergenic |
| TGACATTGCAGATCACAACA+AGG | 0.693281 | 5_1:-9882709 | None:intergenic |
| GGAATGTGAGAAACTAGGGA+TGG | 0.696875 | 5_1:-9882632 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATAAAAAATTTAAAAAA+TGG | - | chr5_1:9884889-9884908 | None:intergenic | 0.0% |
| !!! | TTTTTTTTCTTTTAGAATTA+AGG | - | chr5_1:9883620-9883639 | None:intergenic | 10.0% |
| !!! | ATTTTCACATAAAATAATTT+AGG | + | chr5_1:9885550-9885569 | Msa0716450:intron | 10.0% |
| !!! | TTTTCACATAAAATAATTTA+GGG | + | chr5_1:9885551-9885570 | Msa0716450:intron | 10.0% |
| !!! | AAAAAATAGATTTTTTTTAG+AGG | - | chr5_1:9885798-9885817 | None:intergenic | 10.0% |
| !!! | AATAAAATAGATTTTTTTAG+AGG | - | chr5_1:9886157-9886176 | None:intergenic | 10.0% |
| !! | TTTAAAGATTTAAAAATACA+GGG | - | chr5_1:9886446-9886465 | None:intergenic | 10.0% |
| !! | ATTTAAAGATTTAAAAATAC+AGG | - | chr5_1:9886447-9886466 | None:intergenic | 10.0% |
| !! | CAAATTATGAAAAAATAATT+AGG | - | chr5_1:9886475-9886494 | None:intergenic | 10.0% |
| !! | AAAACTTTCAAAATTTATAA+AGG | + | chr5_1:9886624-9886643 | Msa0716450:intron | 10.0% |
| !! | GCAAAATATAAAATAAATTA+AGG | - | chr5_1:9887556-9887575 | None:intergenic | 10.0% |
| !!! | ATTTATTTTATATTTTGCAA+TGG | + | chr5_1:9887558-9887577 | Msa0716450:three_prime_UTR | 10.0% |
| !! | GTTATATAAAAACAAGATTT+AGG | + | chr5_1:9882470-9882489 | Msa0716450:five_prime_UTR | 15.0% |
| !! | AAAACAATAAAAAAAAGTTG+AGG | + | chr5_1:9882557-9882576 | Msa0716450:five_prime_UTR | 15.0% |
| !!! | ATTATGCATTAATTTTCATA+TGG | + | chr5_1:9882876-9882895 | Msa0716450:intron | 15.0% |
| !! | GTTAACATGAAATAATTAAT+TGG | + | chr5_1:9883884-9883903 | Msa0716450:intron | 15.0% |
| !! | TGAAATAATTAATTGGTTAT+AGG | + | chr5_1:9883891-9883910 | Msa0716450:intron | 15.0% |
| !!! | TTAGTTTTTGAATTATCTAA+TGG | + | chr5_1:9885034-9885053 | Msa0716450:intron | 15.0% |
| !!! | AATTTTAATATTTCATCGTT+TGG | + | chr5_1:9885389-9885408 | Msa0716450:intron | 15.0% |
| !!! | TTTTTAAAATCTGTAACAAA+CGG | + | chr5_1:9886240-9886259 | Msa0716450:intron | 15.0% |
| !! | TTAAAGATTTAAAAATACAG+GGG | - | chr5_1:9886445-9886464 | None:intergenic | 15.0% |
| !!! | AATGAGAAATTTTAAAGTTT+TGG | - | chr5_1:9886566-9886585 | None:intergenic | 15.0% |
| !!! | TTTTAACATTATCTCTTATT+AGG | - | chr5_1:9886973-9886992 | None:intergenic | 15.0% |
| !!! | TACTTTCTATGATTTTTAAT+TGG | + | chr5_1:9887238-9887257 | Msa0716450:intron | 15.0% |
| !!! | CTTTGAAATATAATTATTTG+AGG | + | chr5_1:9887295-9887314 | Msa0716450:intron | 15.0% |
| !! | ATTTGATTGGAAAATTATAG+TGG | + | chr5_1:9883005-9883024 | Msa0716450:CDS | 20.0% |
| !! | TTTGATTGGAAAATTATAGT+GGG | + | chr5_1:9883006-9883025 | Msa0716450:CDS | 20.0% |
| !!! | TATTATGCTTTTTTATCGAT+AGG | + | chr5_1:9883174-9883193 | Msa0716450:intron | 20.0% |
| !! | TATTAATCAAGAATATAAGC+AGG | - | chr5_1:9883269-9883288 | None:intergenic | 20.0% |
| !!! | TTTCTTTTAGAATTAAGGTT+CGG | - | chr5_1:9883615-9883634 | None:intergenic | 20.0% |
| !! | AGAAAAAAAATGATCGAAAA+TGG | + | chr5_1:9883630-9883649 | Msa0716450:intron | 20.0% |
| !! | GAATCAACTTCAAAAAATTT+AGG | - | chr5_1:9883999-9884018 | None:intergenic | 20.0% |
| !!! | GTGTTTTTAATTTGCTTATA+AGG | - | chr5_1:9884114-9884133 | None:intergenic | 20.0% |
| !! | GTATCAAAGAATTTATTTAC+CGG | - | chr5_1:9884279-9884298 | None:intergenic | 20.0% |
| !! | TAAGTTCCAACAATAAATAT+TGG | - | chr5_1:9884328-9884347 | None:intergenic | 20.0% |
| !!! | ATTTTGCTATATTGTTTATG+TGG | + | chr5_1:9885186-9885205 | Msa0716450:CDS | 20.0% |
| !!! | AAATTGTCAACACTAATTTT+AGG | + | chr5_1:9885459-9885478 | Msa0716450:intron | 20.0% |
| !!! | AATTGTCAACACTAATTTTA+GGG | + | chr5_1:9885460-9885479 | Msa0716450:intron | 20.0% |
| !! | TAAATACCACCTATAAATTA+AGG | + | chr5_1:9885488-9885507 | Msa0716450:intron | 20.0% |
| !! | CTATAAATTAAGGATTCTAA+GGG | + | chr5_1:9885498-9885517 | Msa0716450:intron | 20.0% |
| !!! | TTATTTTAATCCGTAACAAA+CGG | - | chr5_1:9885525-9885544 | None:intergenic | 20.0% |
| !!! | TTATTTTAATCCGTAACAAA+CGG | - | chr5_1:9885525-9885544 | None:intergenic | 20.0% |
| !!! | GAAAAAAGTGATTTTTGTTA+TGG | - | chr5_1:9885682-9885701 | None:intergenic | 20.0% |
| !!! | AACAAATAATCTAGTTTGTT+TGG | + | chr5_1:9885704-9885723 | Msa0716450:intron | 20.0% |
| !! | TTTGGATACAACTATATAAA+AGG | + | chr5_1:9885722-9885741 | Msa0716450:intron | 20.0% |
| !! | TTGGATACAACTATATAAAA+GGG | + | chr5_1:9885723-9885742 | Msa0716450:intron | 20.0% |
| !! | CTTAAAAAAGCTATAACAAA+CGG | + | chr5_1:9885953-9885972 | Msa0716450:intron | 20.0% |
| !! | TTAAAAAAGCTATAACAAAC+GGG | + | chr5_1:9885954-9885973 | Msa0716450:intron | 20.0% |
| !!! | AACAAATAATCTAGTTTGTT+TGG | + | chr5_1:9885704-9885723 | Msa0716450:intron | 20.0% |
| !! | TTTGGATACAACTATATAAA+AGG | + | chr5_1:9885722-9885741 | Msa0716450:intron | 20.0% |
| !! | TTGGATACAACTATATAAAA+GGG | + | chr5_1:9885723-9885742 | Msa0716450:intron | 20.0% |
| !! | CTTGAAAAAACTATAACAAA+CGG | + | chr5_1:9886312-9886331 | Msa0716450:intron | 20.0% |
| !! | TTGAAAAAACTATAACAAAC+GGG | + | chr5_1:9886313-9886332 | Msa0716450:intron | 20.0% |
| !! | CTAAATTGTTAATCACAAAT+TGG | + | chr5_1:9886357-9886376 | Msa0716450:intron | 20.0% |
| !!! | ATTTTTCCGTTTTTTCAAAT+TGG | + | chr5_1:9886419-9886438 | Msa0716450:intron | 20.0% |
| !! | ACAAATTTGGTATTAGAATT+TGG | - | chr5_1:9886702-9886721 | None:intergenic | 20.0% |
| !!! | ATTGTAAAACTTGTTACTAT+TGG | + | chr5_1:9887040-9887059 | Msa0716450:intron | 20.0% |
| !!! | TTTTTCAAACATTTGTGATA+TGG | + | chr5_1:9887473-9887492 | Msa0716450:three_prime_UTR | 20.0% |
| !!! | AATTTTCACTTTGAATACTA+AGG | + | chr5_1:9887621-9887640 | Msa0716450:three_prime_UTR | 20.0% |
| ! | TAAAAAAAAGTTGAGGAAAG+TGG | + | chr5_1:9882564-9882583 | Msa0716450:five_prime_UTR | 25.0% |
| ! | TTTGTTGAGAAAGAAACAAA+AGG | + | chr5_1:9882773-9882792 | Msa0716450:CDS | 25.0% |
| !!! | AACTGTTTTGTTATGTGTTT+TGG | + | chr5_1:9882905-9882924 | Msa0716450:intron | 25.0% |
| !!! | TGTTATGTGTTTTGGTTAAT+TGG | + | chr5_1:9882913-9882932 | Msa0716450:intron | 25.0% |
| ! | CTGAAATGCATTATATTTAC+TGG | + | chr5_1:9882962-9882981 | Msa0716450:intron | 25.0% |
| !!! | ATCTTTGATTTGATAATTGC+AGG | + | chr5_1:9883298-9883317 | Msa0716450:intron | 25.0% |
| ! | ATAATTGCAGGTATGATTAT+GGG | + | chr5_1:9883310-9883329 | Msa0716450:intron | 25.0% |
| ! | TTACTCATCATCTTATTCAT+AGG | + | chr5_1:9883499-9883518 | Msa0716450:CDS | 25.0% |
| ! | AACACTTGTAACTACTAATT+TGG | - | chr5_1:9883565-9883584 | None:intergenic | 25.0% |
| !! | CTGTTTGATCTTTTATCTAA+CGG | + | chr5_1:9883765-9883784 | Msa0716450:intron | 25.0% |
| !!! | TCAACAAAAGCATTATTCAA+AGG | + | chr5_1:9883918-9883937 | Msa0716450:CDS | 25.0% |
| !! | TATTCAAAGGCATAAATACA+TGG | + | chr5_1:9883931-9883950 | Msa0716450:CDS | 25.0% |
| ! | AAAGGAAACAATGTTGAAAA+AGG | + | chr5_1:9883956-9883975 | Msa0716450:CDS | 25.0% |
| ! | TCAAAAAATTTAGGTGTCTA+AGG | - | chr5_1:9883990-9884009 | None:intergenic | 25.0% |
| ! | AAGCAAATTAAAAACACCTT+AGG | + | chr5_1:9884117-9884136 | Msa0716450:intron | 25.0% |
| ! | ATAAATTCTTTGATACGCAT+CGG | + | chr5_1:9884283-9884302 | Msa0716450:intron | 25.0% |
| ! | ACATCTCCAATATTTATTGT+TGG | + | chr5_1:9884319-9884338 | Msa0716450:intron | 25.0% |
| ! | AACAATCTGAACAATTAGAA+AGG | - | chr5_1:9884604-9884623 | None:intergenic | 25.0% |
| ! | TCTAATTGTTCAGATTGTTA+AGG | + | chr5_1:9884605-9884624 | Msa0716450:CDS | 25.0% |
| ! | GTTCTAATAAAGATTCTTTG+AGG | + | chr5_1:9884682-9884701 | Msa0716450:intron | 25.0% |
| !! | AATAAAGATTCTTTGAGGAA+AGG | + | chr5_1:9884687-9884706 | Msa0716450:intron | 25.0% |
| !! | ATAAAGATTCTTTGAGGAAA+GGG | + | chr5_1:9884688-9884707 | Msa0716450:intron | 25.0% |
| ! | ATTAAGAATCCAATACTCAA+TGG | - | chr5_1:9884955-9884974 | None:intergenic | 25.0% |
| ! | AAACTAATTAAACATGTGCT+TGG | - | chr5_1:9885021-9885040 | None:intergenic | 25.0% |
| ! | AACAAGAGTGATTAAATCAA+AGG | + | chr5_1:9885131-9885150 | Msa0716450:CDS | 25.0% |
| ! | ACAAGAGTGATTAAATCAAA+GGG | + | chr5_1:9885132-9885151 | Msa0716450:CDS | 25.0% |
| ! | ATATTGTTTATGTGGAGTAA+TGG | + | chr5_1:9885194-9885213 | Msa0716450:CDS | 25.0% |
| !! | ATTGTCAACACTAATTTTAG+GGG | + | chr5_1:9885461-9885480 | Msa0716450:intron | 25.0% |
| ! | TAGAATCCTTAATTTATAGG+TGG | - | chr5_1:9885497-9885516 | None:intergenic | 25.0% |
| ! | CCTTAGAATCCTTAATTTAT+AGG | - | chr5_1:9885500-9885519 | None:intergenic | 25.0% |
| ! | CCTATAAATTAAGGATTCTA+AGG | + | chr5_1:9885497-9885516 | Msa0716450:intron | 25.0% |
| !!! | TATTTTAATCCGTAACAAAC+GGG | - | chr5_1:9885524-9885543 | None:intergenic | 25.0% |
| ! | TTGTAGTTTCAAAAAGTTGA+GGG | - | chr5_1:9886536-9886555 | None:intergenic | 25.0% |
| ! | TTTGTAGTTTCAAAAAGTTG+AGG | - | chr5_1:9886537-9886556 | None:intergenic | 25.0% |
| ! | TTGGAAAATCATGAGTATAT+GGG | + | chr5_1:9887379-9887398 | Msa0716450:CDS | 25.0% |
| !! | CAAATTTGCTTGAATGAAAA+TGG | - | chr5_1:9887508-9887527 | None:intergenic | 25.0% |
| !! | ATTTTATATTTTGCAATGGC+TGG | + | chr5_1:9887562-9887581 | Msa0716450:three_prime_UTR | 25.0% |
| !!! | AGTTTTGAAAGAAAAAGAGC+CGG | + | chr5_1:9882745-9882764 | Msa0716450:CDS | 30.0% |
| AGCAGGAAATGAAATTTGAT+TGG | + | chr5_1:9882992-9883011 | Msa0716450:intron | 30.0% | |
| GATAATTGCAGGTATGATTA+TGG | + | chr5_1:9883309-9883328 | Msa0716450:intron | 30.0% | |
| CAACTGTTTACTACAATATG+AGG | + | chr5_1:9883344-9883363 | Msa0716450:CDS | 30.0% | |
| GCCACTTATAGATTATGATT+TGG | + | chr5_1:9883390-9883409 | Msa0716450:CDS | 30.0% | |
| GCCAAATCATAATCTATAAG+TGG | - | chr5_1:9883394-9883413 | None:intergenic | 30.0% | |
| TAGTAGTTACAAGTGTTTGA+CGG | + | chr5_1:9883568-9883587 | Msa0716450:intron | 30.0% | |
| !!! | ATTTCCTGGAGTTTTATTCT+CGG | + | chr5_1:9883669-9883688 | Msa0716450:intron | 30.0% |
| GATGAAGTGATAACCTATTA+TGG | + | chr5_1:9883833-9883852 | Msa0716450:intron | 30.0% | |
| AGTGATAACCTATTATGGTT+TGG | + | chr5_1:9883838-9883857 | Msa0716450:intron | 30.0% | |
| TAGATAAGCCAAACCATAAT+AGG | - | chr5_1:9883849-9883868 | None:intergenic | 30.0% | |
| TGGCTTATCTATTATTGTGT+TGG | + | chr5_1:9883858-9883877 | Msa0716450:intron | 30.0% | |
| AGGCATAAATACATGGAAAA+AGG | + | chr5_1:9883938-9883957 | Msa0716450:CDS | 30.0% | |
| AGCTAAAATAAGTTGTAAGC+CGG | + | chr5_1:9884257-9884276 | Msa0716450:intron | 30.0% | |
| AATACAAGATGAAGTGGTAA+TGG | + | chr5_1:9884430-9884449 | Msa0716450:intron | 30.0% | |
| CAATAAACGTTCTTTAGCAA+AGG | - | chr5_1:9884546-9884565 | None:intergenic | 30.0% | |
| CTTTGCTAAAGAACGTTTAT+TGG | + | chr5_1:9884544-9884563 | Msa0716450:CDS | 30.0% | |
| TATCACTTCTTGTCTATGTT+TGG | + | chr5_1:9884574-9884593 | Msa0716450:CDS | 30.0% | |
| ATCACTTCTTGTCTATGTTT+GGG | + | chr5_1:9884575-9884594 | Msa0716450:CDS | 30.0% | |
| ! | CTTTTGTGTTAGATTCTTTG+AGG | + | chr5_1:9884653-9884672 | Msa0716450:intron | 30.0% |
| ! | TGTTAGATTCTTTGAGGAAA+GGG | + | chr5_1:9884659-9884678 | Msa0716450:intron | 30.0% |
| ! | TAAAGATTCTTTGAGGAAAG+GGG | + | chr5_1:9884689-9884708 | Msa0716450:intron | 30.0% |
| CCATCAATAACGAATTGTTA+AGG | - | chr5_1:9884796-9884815 | None:intergenic | 30.0% | |
| CCTTAACAATTCGTTATTGA+TGG | + | chr5_1:9884793-9884812 | Msa0716450:intron | 30.0% | |
| TTATAATAAACTGAGCGATC+AGG | - | chr5_1:9884838-9884857 | None:intergenic | 30.0% | |
| TCTGCATAGTAACACATAAA+AGG | - | chr5_1:9884914-9884933 | None:intergenic | 30.0% | |
| TTGGATTCTTAATTTCTTGC+AGG | + | chr5_1:9884962-9884981 | Msa0716450:CDS | 30.0% | |
| AATTAAACATGTGCTTGGTA+AGG | - | chr5_1:9885016-9885035 | None:intergenic | 30.0% | |
| ! | GCATATGATTTTCCAATTCT+AGG | + | chr5_1:9885056-9885075 | Msa0716450:intron | 30.0% |
| AGTGATTAAATCAAAGGGAA+AGG | + | chr5_1:9885137-9885156 | Msa0716450:CDS | 30.0% | |
| AGGGAAAGGAAGTTAAAAAT+TGG | + | chr5_1:9885151-9885170 | Msa0716450:CDS | 30.0% | |
| TGTAGTTTCAAAAAGTTGAG+GGG | - | chr5_1:9886535-9886554 | None:intergenic | 30.0% | |
| AAACTATTTACCGTAAGGTA+CGG | - | chr5_1:9886818-9886837 | None:intergenic | 30.0% | |
| TTATTAGGTAAAACGCATCT+GGG | - | chr5_1:9886958-9886977 | None:intergenic | 30.0% | |
| GATGTCAAATTAACATCAAG+AGG | - | chr5_1:9887016-9887035 | None:intergenic | 30.0% | |
| TTCATAAGTGCAATCAGTTT+AGG | + | chr5_1:9887215-9887234 | Msa0716450:CDS | 30.0% | |
| ! | TTCTTTCTTTTGTGTATCAC+AGG | + | chr5_1:9887325-9887344 | Msa0716450:intron | 30.0% |
| GTTGGAAAATCATGAGTATA+TGG | + | chr5_1:9887378-9887397 | Msa0716450:CDS | 30.0% | |
| TGGAAAATCATGAGTATATG+GGG | + | chr5_1:9887380-9887399 | Msa0716450:CDS | 30.0% | |
| TGCTTGAATGAAAATGGAAT+AGG | - | chr5_1:9887502-9887521 | None:intergenic | 30.0% | |
| TTCTACGAAGTATACAGTTG+AGG | - | chr5_1:9882530-9882549 | None:intergenic | 35.0% | |
| ! | AAAGATTTTGTTGCCATGTG+TGG | - | chr5_1:9882656-9882675 | None:intergenic | 35.0% |
| ACACATGGCAACAAAATCTT+TGG | + | chr5_1:9882655-9882674 | Msa0716450:exon | 35.0% | |
| TCTTTCTCAACAAACTTTGC+CGG | - | chr5_1:9882767-9882786 | None:intergenic | 35.0% | |
| ! | AAAAGGATTTCTAAGAGCAG+TGG | + | chr5_1:9882790-9882809 | Msa0716450:CDS | 35.0% |
| ! | AGCAGTGGTTGATTTCTTAT+GGG | + | chr5_1:9882805-9882824 | Msa0716450:CDS | 35.0% |
| ! | GTTGATTTCTTATGGGAAAG+TGG | + | chr5_1:9882812-9882831 | Msa0716450:CDS | 35.0% |
| AGTCTTCATATGAACCTGTT+TGG | + | chr5_1:9882837-9882856 | Msa0716450:CDS | 35.0% | |
| GCATAATGTTATGAACTCAC+AGG | - | chr5_1:9882863-9882882 | None:intergenic | 35.0% | |
| AATTTCATTTCCTGCTCAAC+AGG | - | chr5_1:9882988-9883007 | None:intergenic | 35.0% | |
| ! | ATTATAGTGGGATCAATCGT+TGG | + | chr5_1:9883018-9883037 | Msa0716450:CDS | 35.0% |
| ! | GGATCAATCGTTGGATTTTT+GGG | + | chr5_1:9883027-9883046 | Msa0716450:CDS | 35.0% |
| CAATGATCAAAGCAAGCATA+GGG | - | chr5_1:9883101-9883120 | None:intergenic | 35.0% | |
| CACAAACTTACACTTGGAAA+TGG | - | chr5_1:9883148-9883167 | None:intergenic | 35.0% | |
| TACACACACAAACTTACACT+TGG | - | chr5_1:9883154-9883173 | None:intergenic | 35.0% | |
| ! | AGTGTGAGTGTTGTAAATTC+TGG | - | chr5_1:9883217-9883236 | None:intergenic | 35.0% |
| CTGATGCTTGGAATAAGTAT+TGG | + | chr5_1:9883433-9883452 | Msa0716450:CDS | 35.0% | |
| ! | GTAATGTCATGTTTGCTGAT+TGG | + | chr5_1:9883464-9883483 | Msa0716450:CDS | 35.0% |
| TACTAATTTGGCGATATCAC+TGG | - | chr5_1:9883553-9883572 | None:intergenic | 35.0% | |
| TTGGAAGAAGAACCAAAAAC+TGG | + | chr5_1:9884080-9884099 | Msa0716450:CDS | 35.0% | |
| ! | CCTTTCACTCTATTTTCCTA+AGG | - | chr5_1:9884136-9884155 | None:intergenic | 35.0% |
| CCTTAGGAAAATAGAGTGAA+AGG | + | chr5_1:9884133-9884152 | Msa0716450:intron | 35.0% | |
| ACTTCATCTTGTATTTCACC+TGG | - | chr5_1:9884425-9884444 | None:intergenic | 35.0% | |
| AGGTGAAATACAAGATGAAG+TGG | + | chr5_1:9884424-9884443 | Msa0716450:CDS | 35.0% | |
| AATGTATCACTTATCCATGC+AGG | + | chr5_1:9884518-9884537 | Msa0716450:intron | 35.0% | |
| ! | GTGTTAGATTCTTTGAGGAA+AGG | + | chr5_1:9884658-9884677 | Msa0716450:intron | 35.0% |
| ! | GTTAGATTCTTTGAGGAAAG+GGG | + | chr5_1:9884660-9884679 | Msa0716450:intron | 35.0% |
| TCAGTCTAAAAATCGAACTC+AGG | + | chr5_1:9884766-9884785 | Msa0716450:intron | 35.0% | |
| TAGCAATAGGAACCTAGAAT+TGG | - | chr5_1:9885071-9885090 | None:intergenic | 35.0% | |
| ACTGTAACAGAGATAGCAAT+AGG | - | chr5_1:9885084-9885103 | None:intergenic | 35.0% | |
| GAAGCTGTATGCATATACAA+AGG | + | chr5_1:9885108-9885127 | Msa0716450:CDS | 35.0% | |
| ! | ATTCCCATTTCTAGAAACAG+TGG | - | chr5_1:9885270-9885289 | None:intergenic | 35.0% |
| CTTCATATCTCTTGTGTGTT+TGG | + | chr5_1:9885307-9885326 | Msa0716450:intron | 35.0% | |
| ! | AATTTAGGGTCCGTTTGTTA+CGG | + | chr5_1:9885565-9885584 | Msa0716450:intron | 35.0% |
| !!! | CTCATAGAACTCTAGCTTTT+GGG | + | chr5_1:9886658-9886677 | Msa0716450:intron | 35.0% |
| !!! | TCATAGAACTCTAGCTTTTG+GGG | + | chr5_1:9886659-9886678 | Msa0716450:intron | 35.0% |
| ! | ACCAAATTTGTTCTCTATGC+AGG | + | chr5_1:9886711-9886730 | Msa0716450:intron | 35.0% |
| ACCTGCATAGAGAACAAATT+TGG | - | chr5_1:9886715-9886734 | None:intergenic | 35.0% | |
| CATAGAGGATGAAAAAAGCA+TGG | - | chr5_1:9886761-9886780 | None:intergenic | 35.0% | |
| !!! | GCTTTTTTCATCCTCTATGT+CGG | + | chr5_1:9886762-9886781 | Msa0716450:CDS | 35.0% |
| ATATTGAACTACCGACATAG+AGG | - | chr5_1:9886776-9886795 | None:intergenic | 35.0% | |
| AACTATTTACCGTAAGGTAC+GGG | - | chr5_1:9886817-9886836 | None:intergenic | 35.0% | |
| CCAGAAAACTATTTACCGTA+AGG | - | chr5_1:9886823-9886842 | None:intergenic | 35.0% | |
| ! | CCTTACGGTAAATAGTTTTC+TGG | + | chr5_1:9886820-9886839 | Msa0716450:intron | 35.0% |
| TGAGTTTCATCACTTTACGT+AGG | + | chr5_1:9886911-9886930 | Msa0716450:intron | 35.0% | |
| CTTATTAGGTAAAACGCATC+TGG | - | chr5_1:9886959-9886978 | None:intergenic | 35.0% | |
| !! | TGCAGCTTCATACTTTGTTT+TGG | + | chr5_1:9887091-9887110 | Msa0716450:intron | 35.0% |
| AGAAGGATAATTGCAATCCT+TGG | + | chr5_1:9887152-9887171 | Msa0716450:CDS | 35.0% | |
| TAATAATTGATGCACGACCA+AGG | - | chr5_1:9887172-9887191 | None:intergenic | 35.0% | |
| ACTGATTGCACTTATGAAGA+TGG | - | chr5_1:9887213-9887232 | None:intergenic | 35.0% | |
| ! | TTTCTTTTGTGTATCACAGG+TGG | + | chr5_1:9887328-9887347 | Msa0716450:intron | 35.0% |
| AGAGAACATGATTGTGAAGT+TGG | + | chr5_1:9887360-9887379 | Msa0716450:CDS | 35.0% | |
| TCTTTGCACTCAATAAGCTT+AGG | + | chr5_1:9887411-9887430 | Msa0716450:exon | 35.0% | |
| ACGAAGTATACAGTTGAGGA+AGG | - | chr5_1:9882526-9882545 | None:intergenic | 40.0% | |
| GAAACTAGGGATGGAAATCT+AGG | - | chr5_1:9882626-9882645 | None:intergenic | 40.0% | |
| GTGTGGAATGTGAGAAACTA+GGG | - | chr5_1:9882639-9882658 | None:intergenic | 40.0% | |
| TGTGTGGAATGTGAGAAACT+AGG | - | chr5_1:9882640-9882659 | None:intergenic | 40.0% | |
| AGTTTCTCACATTCCACACA+TGG | + | chr5_1:9882640-9882659 | Msa0716450:exon | 40.0% | |
| TGACATTGCAGATCACAACA+AGG | - | chr5_1:9882712-9882731 | None:intergenic | 40.0% | |
| ! | GAGCAGTGGTTGATTTCTTA+TGG | + | chr5_1:9882804-9882823 | Msa0716450:CDS | 40.0% |
| ! | GGGATCAATCGTTGGATTTT+TGG | + | chr5_1:9883026-9883045 | Msa0716450:CDS | 40.0% |
| CCAATGATCAAAGCAAGCAT+AGG | - | chr5_1:9883102-9883121 | None:intergenic | 40.0% | |
| CCTATGCTTGCTTTGATCAT+TGG | + | chr5_1:9883099-9883118 | Msa0716450:CDS | 40.0% | |
| GAAATGGCTGTAGAAGACTT+GGG | - | chr5_1:9883132-9883151 | None:intergenic | 40.0% | |
| GCAGGACTAACACAATTAGT+TGG | - | chr5_1:9883251-9883270 | None:intergenic | 40.0% | |
| TAAGTGGCATGTCTAGTGTT+GGG | - | chr5_1:9883378-9883397 | None:intergenic | 40.0% | |
| ATAAGTGGCATGTCTAGTGT+TGG | - | chr5_1:9883379-9883398 | None:intergenic | 40.0% | |
| CTTATTCCAAGCATCAGCAT+AGG | - | chr5_1:9883430-9883449 | None:intergenic | 40.0% | |
| ! | TGTCATGTTTGCTGATTGGA+TGG | + | chr5_1:9883468-9883487 | Msa0716450:CDS | 40.0% |
| AATTTGGCGATATCACTGGT+CGG | - | chr5_1:9883549-9883568 | None:intergenic | 40.0% | |
| GGTTGTGAGCTAATTGAGTT+AGG | + | chr5_1:9883589-9883608 | Msa0716450:intron | 40.0% | |
| ! | AGCGTGCTGTTAAAATTTCC+TGG | + | chr5_1:9883655-9883674 | Msa0716450:intron | 40.0% |
| ATTCTCATTCCTTCATCCTC+TGG | + | chr5_1:9884015-9884034 | Msa0716450:intron | 40.0% | |
| TTCTTATCACCAGAGGATGA+AGG | - | chr5_1:9884027-9884046 | None:intergenic | 40.0% | |
| AGTAGCTTTCTTATCACCAG+AGG | - | chr5_1:9884034-9884053 | None:intergenic | 40.0% | |
| ! | AGAAAGCTACTTTGACATGC+AGG | + | chr5_1:9884043-9884062 | Msa0716450:intron | 40.0% |
| GAAGAAGAACCAAAAACTGG+TGG | + | chr5_1:9884083-9884102 | Msa0716450:CDS | 40.0% | |
| ! | AAGGACTTACCACCAGTTTT+TGG | - | chr5_1:9884095-9884114 | None:intergenic | 40.0% |
| ACTTCTTGTCTATGTTTGGG+TGG | + | chr5_1:9884578-9884597 | Msa0716450:CDS | 40.0% | |
| ! | AGACTTGCTCCATTGAGTAT+TGG | + | chr5_1:9884943-9884962 | Msa0716450:CDS | 40.0% |
| TGTTTATGTGGAGTAATGGC+TGG | + | chr5_1:9885198-9885217 | Msa0716450:CDS | 40.0% | |
| ! | AGATATGAAGAGTGTACCTG+CGG | - | chr5_1:9885297-9885316 | None:intergenic | 40.0% |
| GCTTCAAATGAGAAGCTGTT+AGG | - | chr5_1:9885832-9885851 | None:intergenic | 40.0% | |
| CAGGGGCCAATTTGAAAAAA+CGG | - | chr5_1:9886428-9886447 | None:intergenic | 40.0% | |
| CCAAAAGCTAGAGTTCTATG+AGG | - | chr5_1:9886660-9886679 | None:intergenic | 40.0% | |
| !!! | CCTCATAGAACTCTAGCTTT+TGG | + | chr5_1:9886657-9886676 | Msa0716450:intron | 40.0% |
| ACTATTTACCGTAAGGTACG+GGG | - | chr5_1:9886816-9886835 | None:intergenic | 40.0% | |
| !! | TAACATCAAGAGGAGTGTCA+TGG | - | chr5_1:9887006-9887025 | None:intergenic | 40.0% |
| GGAATGTGAGAAACTAGGGA+TGG | - | chr5_1:9882635-9882654 | None:intergenic | 45.0% | |
| CTTTGGTTACTGCAGCAACA+TGG | + | chr5_1:9882672-9882691 | Msa0716450:CDS | 45.0% | |
| TATGAACTCACAGGCCAAAC+AGG | - | chr5_1:9882854-9882873 | None:intergenic | 45.0% | |
| ! | TATTTACTGGCCTGTTGAGC+AGG | + | chr5_1:9882975-9882994 | Msa0716450:intron | 45.0% |
| !! | TGGATTTTTGGGAGCAGCTT+TGG | + | chr5_1:9883038-9883057 | Msa0716450:CDS | 45.0% |
| !! | GGATTTTTGGGAGCAGCTTT+GGG | + | chr5_1:9883039-9883058 | Msa0716450:CDS | 45.0% |
| GGAAATGGCTGTAGAAGACT+TGG | - | chr5_1:9883133-9883152 | None:intergenic | 45.0% | |
| ACGACCGAGAATAAAACTCC+AGG | - | chr5_1:9883676-9883695 | None:intergenic | 45.0% | |
| TGGTTCTTCTTCCAACTGCT+TGG | - | chr5_1:9884075-9884094 | None:intergenic | 45.0% | |
| TGTATTTCACCTGGACCCTT+TGG | - | chr5_1:9884416-9884435 | None:intergenic | 45.0% | |
| ATGTGGAGTAATGGCTGGTA+TGG | + | chr5_1:9885203-9885222 | Msa0716450:CDS | 45.0% | |
| TAATGGCTGGTATGGTTGGA+GGG | + | chr5_1:9885211-9885230 | Msa0716450:CDS | 45.0% | |
| ! | TCTAGGAGGTGGCTTCATTT+TGG | + | chr5_1:9885242-9885261 | Msa0716450:CDS | 45.0% |
| ! | CTAGGAGGTGGCTTCATTTT+GGG | + | chr5_1:9885243-9885262 | Msa0716450:CDS | 45.0% |
| ! | TAGGAGGTGGCTTCATTTTG+GGG | + | chr5_1:9885244-9885263 | Msa0716450:CDS | 45.0% |
| !! | GGGCCACTGTTTCTAGAAAT+GGG | + | chr5_1:9885264-9885283 | Msa0716450:CDS | 45.0% |
| ! | TTCTAAGGGCCCGTTTGTTA+CGG | + | chr5_1:9885512-9885531 | Msa0716450:intron | 45.0% |
| TTATCCTTCTCACCACATGC+TGG | - | chr5_1:9887142-9887161 | None:intergenic | 45.0% | |
| TTGTGTATCACAGGTGGAGT+AGG | + | chr5_1:9887334-9887353 | Msa0716450:intron | 45.0% | |
| !! | AAATTATGAAAAAATAATTA+GGG | - | chr5_1:9886474-9886493 | None:intergenic | 5.0% |
| !!! | CTTTAAATTTTTAAAATTTA+AGG | - | chr5_1:9886507-9886526 | None:intergenic | 5.0% |
| !! | TTGGGAAGTGTTGGAGGTGT+AGG | + | chr5_1:9883057-9883076 | Msa0716450:CDS | 50.0% |
| TTCCAGCCTATGCTGATGCT+TGG | + | chr5_1:9883421-9883440 | Msa0716450:CDS | 50.0% | |
| TTCCAAGCATCAGCATAGGC+TGG | - | chr5_1:9883426-9883445 | None:intergenic | 50.0% | |
| CGTTGATCTAGATCGACTGC+AGG | - | chr5_1:9883805-9883824 | None:intergenic | 50.0% | |
| AGACTACAAGCCCCTACCAA+AGG | + | chr5_1:9884397-9884416 | Msa0716450:CDS | 50.0% | |
| GACTACAAGCCCCTACCAAA+GGG | + | chr5_1:9884398-9884417 | Msa0716450:CDS | 50.0% | |
| TTCACCTGGACCCTTTGGTA+GGG | - | chr5_1:9884411-9884430 | None:intergenic | 50.0% | |
| TTTCACCTGGACCCTTTGGT+AGG | - | chr5_1:9884412-9884431 | None:intergenic | 50.0% | |
| !! | CTTTAGCAAAGGCACCTGCA+TGG | - | chr5_1:9884535-9884554 | None:intergenic | 50.0% |
| GGAGTAATGGCTGGTATGGT+TGG | + | chr5_1:9885207-9885226 | Msa0716450:CDS | 50.0% | |
| GTAATGGCTGGTATGGTTGG+AGG | + | chr5_1:9885210-9885229 | Msa0716450:CDS | 50.0% | |
| !! | GGGGCCACTGTTTCTAGAAA+TGG | + | chr5_1:9885263-9885282 | Msa0716450:CDS | 50.0% |
| AGAAATGGGAATTCCTCCGC+AGG | + | chr5_1:9885278-9885297 | Msa0716450:CDS | 50.0% | |
| ! | TATGAAGAGTGTACCTGCGG+AGG | - | chr5_1:9885294-9885313 | None:intergenic | 50.0% |
| GCAACCATAGCTGCATTTGC+TGG | + | chr5_1:9887116-9887135 | Msa0716450:CDS | 50.0% | |
| !! | GGAGCAGCTTTGGGAAGTGT+TGG | + | chr5_1:9883048-9883067 | Msa0716450:CDS | 55.0% |
| !! | GCAGCTTTGGGAAGTGTTGG+AGG | + | chr5_1:9883051-9883070 | Msa0716450:CDS | 55.0% |
| !! | GGAAGTGTTGGAGGTGTAGG+AGG | + | chr5_1:9883060-9883079 | Msa0716450:CDS | 55.0% |
| ! | AGTGTTGGAGGTGTAGGAGG+TGG | + | chr5_1:9883063-9883082 | Msa0716450:CDS | 55.0% |
| TCACCTGGACCCTTTGGTAG+GGG | - | chr5_1:9884410-9884429 | None:intergenic | 55.0% | |
| ACTGAGCGATCAGGCTCAAG+TGG | - | chr5_1:9884829-9884848 | None:intergenic | 55.0% | |
| GGTATGGTTGGAGGGTTGCT+TGG | + | chr5_1:9885219-9885238 | Msa0716450:CDS | 55.0% | |
| GTTGGAGGGTTGCTTGGTCT+AGG | + | chr5_1:9885225-9885244 | Msa0716450:CDS | 55.0% | |
| GATCGCTTCCCCGTACCTTA+CGG | + | chr5_1:9886805-9886824 | Msa0716450:CDS | 55.0% | |
| CTGGCCAGCAAATGCAGCTA+TGG | - | chr5_1:9887123-9887142 | None:intergenic | 55.0% | |
| ! | TGCATTTGCTGGCCAGCATG+TGG | + | chr5_1:9887127-9887146 | Msa0716450:CDS | 55.0% |
| ! | GTTGGAGGTGTAGGAGGTGG+TGG | + | chr5_1:9883066-9883085 | Msa0716450:CDS | 60.0% |
| GCAGGAAGCAGCCAAGCAGT+TGG | + | chr5_1:9884061-9884080 | Msa0716450:intron | 60.0% | |
| AAGCCCCTACCAAAGGGTCC+AGG | + | chr5_1:9884404-9884423 | Msa0716450:CDS | 60.0% | |
| GGAGGGTTGCTTGGTCTAGG+AGG | + | chr5_1:9885228-9885247 | Msa0716450:CDS | 60.0% | |
| GGGTTGCTTGGTCTAGGAGG+TGG | + | chr5_1:9885231-9885250 | Msa0716450:CDS | 60.0% | |
| CTGGCCAGCATGTGGTGAGA+AGG | + | chr5_1:9887135-9887154 | Msa0716450:CDS | 60.0% | |
| GGCGATATCACTGGTCGGCG+TGG | - | chr5_1:9883544-9883563 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 9882433 | 9887660 | 9882433 | ID=Msa0716450;Name=Msa0716450 |
| chr5_1 | mRNA | 9882433 | 9887660 | 9882433 | ID=Msa0716450-mRNA-1;Parent=Msa0716450;Name=Msa0716450-mRNA-1;_AED=0.08;_eAED=0.08;_QI=226|1|1|1|1|1|12|234|464 |
| chr5_1 | exon | 9882433 | 9882862 | 9882433 | ID=Msa0716450-mRNA-1:exon:3914;Parent=Msa0716450-mRNA-1 |
| chr5_1 | exon | 9882997 | 9883156 | 9882997 | ID=Msa0716450-mRNA-1:exon:3915;Parent=Msa0716450-mRNA-1 |
| chr5_1 | exon | 9883320 | 9883520 | 9883320 | ID=Msa0716450-mRNA-1:exon:3916;Parent=Msa0716450-mRNA-1 |
| chr5_1 | exon | 9883913 | 9883977 | 9883913 | ID=Msa0716450-mRNA-1:exon:3917;Parent=Msa0716450-mRNA-1 |
| chr5_1 | exon | 9884065 | 9884104 | 9884065 | ID=Msa0716450-mRNA-1:exon:3918;Parent=Msa0716450-mRNA-1 |
| chr5_1 | exon | 9884396 | 9884445 | 9884396 | ID=Msa0716450-mRNA-1:exon:3919;Parent=Msa0716450-mRNA-1 |
| chr5_1 | exon | 9884540 | 9884626 | 9884540 | ID=Msa0716450-mRNA-1:exon:3920;Parent=Msa0716450-mRNA-1 |
| chr5_1 | exon | 9884933 | 9884983 | 9884933 | ID=Msa0716450-mRNA-1:exon:3921;Parent=Msa0716450-mRNA-1 |
| chr5_1 | exon | 9885078 | 9885299 | 9885078 | ID=Msa0716450-mRNA-1:exon:3922;Parent=Msa0716450-mRNA-1 |
| chr5_1 | exon | 9886733 | 9886826 | 9886733 | ID=Msa0716450-mRNA-1:exon:3923;Parent=Msa0716450-mRNA-1 |
| chr5_1 | exon | 9887096 | 9887236 | 9887096 | ID=Msa0716450-mRNA-1:exon:3924;Parent=Msa0716450-mRNA-1 |
| chr5_1 | exon | 9887347 | 9887660 | 9887347 | ID=Msa0716450-mRNA-1:exon:3925;Parent=Msa0716450-mRNA-1 |
| chr5_1 | five_prime_UTR | 9882433 | 9882658 | 9882433 | ID=Msa0716450-mRNA-1:five_prime_utr;Parent=Msa0716450-mRNA-1 |
| chr5_1 | CDS | 9882659 | 9882862 | 9882659 | ID=Msa0716450-mRNA-1:cds;Parent=Msa0716450-mRNA-1 |
| chr5_1 | CDS | 9882997 | 9883156 | 9882997 | ID=Msa0716450-mRNA-1:cds;Parent=Msa0716450-mRNA-1 |
| chr5_1 | CDS | 9883320 | 9883520 | 9883320 | ID=Msa0716450-mRNA-1:cds;Parent=Msa0716450-mRNA-1 |
| chr5_1 | CDS | 9883913 | 9883977 | 9883913 | ID=Msa0716450-mRNA-1:cds;Parent=Msa0716450-mRNA-1 |
| chr5_1 | CDS | 9884065 | 9884104 | 9884065 | ID=Msa0716450-mRNA-1:cds;Parent=Msa0716450-mRNA-1 |
| chr5_1 | CDS | 9884396 | 9884445 | 9884396 | ID=Msa0716450-mRNA-1:cds;Parent=Msa0716450-mRNA-1 |
| chr5_1 | CDS | 9884540 | 9884626 | 9884540 | ID=Msa0716450-mRNA-1:cds;Parent=Msa0716450-mRNA-1 |
| chr5_1 | CDS | 9884933 | 9884983 | 9884933 | ID=Msa0716450-mRNA-1:cds;Parent=Msa0716450-mRNA-1 |
| chr5_1 | CDS | 9885078 | 9885299 | 9885078 | ID=Msa0716450-mRNA-1:cds;Parent=Msa0716450-mRNA-1 |
| chr5_1 | CDS | 9886733 | 9886826 | 9886733 | ID=Msa0716450-mRNA-1:cds;Parent=Msa0716450-mRNA-1 |
| chr5_1 | CDS | 9887096 | 9887236 | 9887096 | ID=Msa0716450-mRNA-1:cds;Parent=Msa0716450-mRNA-1 |
| chr5_1 | CDS | 9887347 | 9887426 | 9887347 | ID=Msa0716450-mRNA-1:cds;Parent=Msa0716450-mRNA-1 |
| chr5_1 | three_prime_UTR | 9887427 | 9887660 | 9887427 | ID=Msa0716450-mRNA-1:three_prime_utr;Parent=Msa0716450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
