Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0579770 | XP_003607653.1 | 95.968 | 496 | 1 | 1 | 1 | 496 | 1 | 477 | 0.0 | 980 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0579770 | sp|Q9T042|PDI54_ARATH | 70.942 | 499 | 123 | 2 | 1 | 496 | 1 | 480 | 0.0 | 749 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0579770 | G7JDV5 | 95.968 | 496 | 1 | 1 | 1 | 496 | 1 | 477 | 0.0 | 980 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007850 | Msa0579770 | 0.840724 | 7.318150e-58 | -8.615850e-47 |
| Msa0031510 | Msa0579770 | 0.823284 | 1.504662e-53 | -8.615850e-47 |
| Msa0056270 | Msa0579770 | 0.835948 | 1.246267e-56 | -8.615850e-47 |
| Msa0126520 | Msa0579770 | 0.823558 | 1.298493e-53 | -8.615850e-47 |
| Msa0262480 | Msa0579770 | 0.801017 | 1.097879e-48 | -8.615850e-47 |
| Msa0296250 | Msa0579770 | 0.818306 | 2.100166e-52 | -8.615850e-47 |
| Msa0348830 | Msa0579770 | 0.803837 | 2.880901e-49 | -8.615850e-47 |
| Msa0528060 | Msa0579770 | 0.814157 | 1.777342e-51 | -8.615850e-47 |
| Msa0534750 | Msa0579770 | 0.808813 | 2.575220e-50 | -8.615850e-47 |
| Msa0579770 | Msa0593700 | 0.837839 | 4.102437e-57 | -8.615850e-47 |
| Msa0579770 | Msa0609000 | 0.802685 | 4.990102e-49 | -8.615850e-47 |
| Msa0579770 | Msa0615580 | 0.811974 | 5.351373e-51 | -8.615850e-47 |
| Msa0579770 | Msa0619860 | 0.816201 | 6.247451e-52 | -8.615850e-47 |
| Msa0579770 | Msa0633570 | 0.833318 | 5.711914e-56 | -8.615850e-47 |
| Msa0579770 | Msa0659990 | 0.806906 | 6.550574e-50 | -8.615850e-47 |
| Msa0579770 | Msa0683780 | 0.808442 | 3.091543e-50 | -8.615850e-47 |
| Msa0579770 | Msa0699190 | 0.814798 | 1.282507e-51 | -8.615850e-47 |
| Msa0579770 | Msa0740600 | 0.806640 | 7.456927e-50 | -8.615850e-47 |
| Msa0579770 | Msa0858440 | 0.824482 | 7.881054e-54 | -8.615850e-47 |
| Msa0579770 | Msa0897400 | 0.801542 | 8.571400e-49 | -8.615850e-47 |
| Msa0579770 | Msa0913240 | 0.807483 | 4.944251e-50 | -8.615850e-47 |
| Msa0579770 | Msa0960830 | 0.806556 | 7.766754e-50 | -8.615850e-47 |
| Msa0579770 | Msa0963020 | 0.847199 | 1.345362e-59 | -8.615850e-47 |
| Msa0579770 | Msa1017510 | 0.824761 | 6.773514e-54 | -8.615850e-47 |
| Msa0579770 | Msa1166870 | 0.809302 | 2.024049e-50 | -8.615850e-47 |
| Msa0579770 | Msa1179980 | 0.803879 | 2.823850e-49 | -8.615850e-47 |
| Msa0579770 | Msa1195300 | 0.801992 | 6.930436e-49 | -8.615850e-47 |
| Msa0579770 | Msa1270620 | 0.810857 | 9.355436e-51 | -8.615850e-47 |
| Msa0579770 | Msa1270690 | 0.805775 | 1.134080e-49 | -8.615850e-47 |
| Msa0579770 | Msa1299700 | 0.806138 | 9.514112e-50 | -8.615850e-47 |
| Msa0579770 | Msa1306990 | 0.804382 | 2.218566e-49 | -8.615850e-47 |
| Msa0579770 | Msa1316680 | 0.808338 | 3.253365e-50 | -8.615850e-47 |
| Msa0579770 | Msa1349570 | 0.803729 | 3.034030e-49 | -8.615850e-47 |
| Msa0579770 | Msa1369190 | 0.827947 | 1.180666e-54 | -8.615850e-47 |
| Msa0579770 | Msa1462860 | 0.809496 | 1.838872e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0579770 | MtrunA17_Chr4g0041801 | 95.968 | 496 | 1 | 1 | 1 | 496 | 1 | 477 | 0.0 | 980 |
| Msa0579770 | MtrunA17_Chr2g0319621 | 69.264 | 462 | 101 | 2 | 38 | 496 | 1 | 424 | 0.0 | 672 |
| Msa0579770 | MtrunA17_Chr5g0425571 | 32.683 | 205 | 97 | 9 | 309 | 494 | 202 | 384 | 2.19e-19 | 90.1 |
| Msa0579770 | MtrunA17_Chr5g0425571 | 38.318 | 107 | 65 | 1 | 5 | 111 | 6 | 111 | 5.98e-16 | 79.7 |
| Msa0579770 | MtrunA17_Chr3g0120271 | 32.243 | 214 | 105 | 8 | 292 | 489 | 161 | 350 | 4.03e-17 | 82.8 |
| Msa0579770 | MtrunA17_Chr4g0050511 | 33.500 | 200 | 100 | 9 | 309 | 494 | 202 | 382 | 1.45e-16 | 81.6 |
| Msa0579770 | MtrunA17_Chr4g0050511 | 33.645 | 107 | 70 | 1 | 5 | 111 | 6 | 111 | 2.35e-13 | 71.6 |
| Msa0579770 | MtrunA17_Chr3g0124851 | 40.000 | 100 | 53 | 2 | 133 | 230 | 25 | 119 | 4.45e-15 | 77.8 |
| Msa0579770 | MtrunA17_Chr1g0194961 | 37.209 | 86 | 48 | 1 | 146 | 231 | 34 | 113 | 1.26e-13 | 72.4 |
| Msa0579770 | MtrunA17_Chr7g0271721 | 35.185 | 108 | 58 | 2 | 146 | 247 | 29 | 130 | 3.44e-13 | 70.9 |
| Msa0579770 | MtrunA17_Chr1g0200731 | 37.113 | 97 | 52 | 2 | 144 | 240 | 96 | 183 | 5.71e-13 | 70.9 |
| Msa0579770 | MtrunA17_Chr5g0438731 | 30.275 | 109 | 67 | 2 | 143 | 250 | 192 | 292 | 6.41e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0579770 | AT4G27080.1 | 70.942 | 499 | 123 | 2 | 1 | 496 | 1 | 480 | 0.0 | 749 |
| Msa0579770 | AT4G27080.2 | 70.576 | 486 | 121 | 2 | 14 | 496 | 66 | 532 | 0.0 | 727 |
| Msa0579770 | AT3G20560.1 | 67.465 | 501 | 138 | 3 | 1 | 495 | 1 | 482 | 0.0 | 703 |
| Msa0579770 | AT1G50950.1 | 64.542 | 502 | 152 | 4 | 1 | 495 | 1 | 483 | 0.0 | 657 |
| Msa0579770 | AT1G50950.2 | 63.905 | 507 | 152 | 5 | 1 | 495 | 1 | 488 | 0.0 | 651 |
| Msa0579770 | AT1G36050.2 | 30.732 | 205 | 101 | 6 | 309 | 494 | 202 | 384 | 1.82e-19 | 90.5 |
| Msa0579770 | AT1G36050.2 | 39.252 | 107 | 64 | 1 | 5 | 111 | 6 | 111 | 1.53e-15 | 79.0 |
| Msa0579770 | AT1G36050.1 | 29.648 | 199 | 100 | 5 | 309 | 489 | 202 | 378 | 5.96e-18 | 87.0 |
| Msa0579770 | AT1G36050.1 | 39.252 | 107 | 64 | 1 | 5 | 111 | 6 | 111 | 1.98e-15 | 79.0 |
| Msa0579770 | AT1G22200.1 | 30.622 | 209 | 96 | 10 | 309 | 494 | 202 | 384 | 1.74e-16 | 81.6 |
| Msa0579770 | AT1G22200.1 | 35.514 | 107 | 68 | 1 | 5 | 111 | 6 | 111 | 3.26e-13 | 71.6 |
| Msa0579770 | AT3G54960.2 | 34.074 | 135 | 60 | 3 | 105 | 230 | 66 | 180 | 1.30e-15 | 79.7 |
| Msa0579770 | AT3G54960.1 | 34.074 | 135 | 60 | 3 | 105 | 230 | 66 | 180 | 1.38e-15 | 79.7 |
| Msa0579770 | AT3G22290.2 | 29.858 | 211 | 113 | 8 | 292 | 489 | 160 | 348 | 9.47e-14 | 73.2 |
| Msa0579770 | AT3G22290.1 | 29.858 | 211 | 113 | 8 | 292 | 489 | 160 | 348 | 9.47e-14 | 73.2 |
| Msa0579770 | AT2G47470.4 | 37.209 | 86 | 48 | 1 | 146 | 231 | 28 | 107 | 2.22e-13 | 71.6 |
| Msa0579770 | AT1G22200.2 | 35.514 | 107 | 68 | 1 | 5 | 111 | 6 | 111 | 2.28e-13 | 71.6 |
| Msa0579770 | AT2G47470.1 | 37.209 | 86 | 48 | 1 | 146 | 231 | 28 | 107 | 2.33e-13 | 72.0 |
| Msa0579770 | AT2G47470.2 | 37.209 | 86 | 48 | 1 | 146 | 231 | 28 | 107 | 2.77e-13 | 70.5 |
| Msa0579770 | AT2G47470.3 | 37.209 | 86 | 48 | 1 | 146 | 231 | 28 | 107 | 3.99e-13 | 70.9 |
| Msa0579770 | AT1G21750.1 | 32.710 | 107 | 62 | 3 | 126 | 230 | 18 | 116 | 4.07e-13 | 72.0 |
| Msa0579770 | AT1G21750.2 | 32.710 | 107 | 62 | 3 | 126 | 230 | 18 | 116 | 4.22e-13 | 72.0 |
| Msa0579770 | AT1G04980.1 | 35.354 | 99 | 53 | 3 | 143 | 240 | 169 | 257 | 2.44e-12 | 69.3 |
| Msa0579770 | AT1G77510.1 | 35.955 | 89 | 50 | 2 | 144 | 230 | 32 | 115 | 3.92e-12 | 68.9 |
| Msa0579770 | AT2G32920.1 | 33.333 | 99 | 55 | 3 | 143 | 240 | 164 | 252 | 2.83e-11 | 65.9 |
Find 127 sgRNAs with CRISPR-Local
Find 554 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAATACGCCCATCCATTTC+TGG | 0.222157 | 4_1:-84635168 | None:intergenic |
| TGCGTATCGATTTCAATTTC+AGG | 0.234066 | 4_1:+84633213 | Msa0579770:CDS |
| GTCATCAACCATCTATCTTT+TGG | 0.258329 | 4_1:+84639584 | Msa0579770:CDS |
| TGTATCACGGTCTCCGTAAT+AGG | 0.280950 | 4_1:-84638878 | None:intergenic |
| CACTGGCTCCGAGTTTCATT+CGG | 0.298086 | 4_1:+84634237 | Msa0579770:CDS |
| AATGGATGGGCGTATTCTTT+TGG | 0.302157 | 4_1:+84635173 | Msa0579770:CDS |
| ATTCATCAACACTCGTGATT+TGG | 0.307736 | 4_1:+84639694 | Msa0579770:CDS |
| TCCATGGTCGCTTCTGAAAT+AGG | 0.328292 | 4_1:-84638839 | None:intergenic |
| CATGGCGAGAGCCGCCAATA+TGG | 0.330975 | 4_1:-84632987 | None:intergenic |
| CAATGGAGCGATGGAAAATA+TGG | 0.331545 | 4_1:-84641414 | None:intergenic |
| GCTGAGACAACCAAGCTTCC+TGG | 0.341648 | 4_1:-84639512 | None:intergenic |
| TTTATGCACCATGGTGTTCC+TGG | 0.356969 | 4_1:+84634518 | Msa0579770:CDS |
| AATCACAGTTTACAAGGATA+AGG | 0.360978 | 4_1:+84641329 | Msa0579770:three_prime_UTR |
| TTTAGGACATTGCAGGTTCC+AGG | 0.361213 | 4_1:+84639494 | Msa0579770:intron |
| ACTGAACTGATAAGGTATAT+TGG | 0.369229 | 4_1:+84641371 | Msa0579770:three_prime_UTR |
| ATCCGTCTATTCGCATCTTT+CGG | 0.371601 | 4_1:+84636386 | Msa0579770:CDS |
| GACGCCTCGGTCAAATCTCT+TGG | 0.392976 | 4_1:-84632944 | None:intergenic |
| CAAATGTCTGTGCTATCATT+GGG | 0.396338 | 4_1:+84640964 | Msa0579770:CDS |
| GGGATATGTGCGTGTGAAAA+AGG | 0.396887 | 4_1:+84639136 | Msa0579770:CDS |
| ACAAATGTCTGTGCTATCAT+TGG | 0.398122 | 4_1:+84640963 | Msa0579770:CDS |
| GATTCTGCATAACACCATTA+AGG | 0.403888 | 4_1:+84641128 | Msa0579770:CDS |
| TCATGGTTGATACCTAAGTA+TGG | 0.407163 | 4_1:-84639653 | None:intergenic |
| TTGACCGAGGCGTCGTTGTC+GGG | 0.407969 | 4_1:+84632953 | Msa0579770:CDS |
| ATCACAGTTTACAAGGATAA+GGG | 0.410850 | 4_1:+84641330 | Msa0579770:three_prime_UTR |
| TTTCTATTGATTCAAAGTTA+AGG | 0.415206 | 4_1:+84634212 | Msa0579770:CDS |
| GCAGACCATGGAGACTTTAG+TGG | 0.419781 | 4_1:+84639019 | Msa0579770:intron |
| GCAGATAGAGCATTATATTC+AGG | 0.426035 | 4_1:+84640673 | Msa0579770:intron |
| TTCCATGTTCTGACCTGCAT+GGG | 0.432835 | 4_1:-84640821 | None:intergenic |
| CATGAACATGAGTCCTATTA+CGG | 0.436547 | 4_1:+84638865 | Msa0579770:CDS |
| CGAGGCGTCGTTGTCGGGAG+CGG | 0.457700 | 4_1:+84632958 | Msa0579770:CDS |
| AGGATCTCAACATCTAGCTT+TGG | 0.462268 | 4_1:+84639055 | Msa0579770:CDS |
| AAAAGACCAGCACCGTCAAC+CGG | 0.469907 | 4_1:+84639098 | Msa0579770:CDS |
| TTTGACCGAGGCGTCGTTGT+CGG | 0.470866 | 4_1:+84632952 | Msa0579770:CDS |
| CATAATGCACTGAACTGATA+AGG | 0.471018 | 4_1:+84641363 | Msa0579770:three_prime_UTR |
| TCAAGATGGAACCTTGCAAC+AGG | 0.472576 | 4_1:-84640791 | None:intergenic |
| ATTTAGATATGATCCAGAAA+TGG | 0.472805 | 4_1:+84635155 | Msa0579770:intron |
| ATCTCAACATCTAGCTTTGG+AGG | 0.473111 | 4_1:+84639058 | Msa0579770:CDS |
| GTAGACACAGACTTTGTTGA+AGG | 0.475526 | 4_1:+84634295 | Msa0579770:CDS |
| CATCCACCGGTTGACGGTGC+TGG | 0.479947 | 4_1:-84639104 | None:intergenic |
| ACTGGCTCCGAGTTTCATTC+GGG | 0.487654 | 4_1:+84634238 | Msa0579770:CDS |
| ATTGCAGGTTCCAGGAAGCT+TGG | 0.490669 | 4_1:+84639502 | Msa0579770:intron |
| ACGCCTCGGTCAAATCTCTT+GGG | 0.494911 | 4_1:-84632943 | None:intergenic |
| CTCAAGAAGGTGATTTATGC+AGG | 0.495440 | 4_1:+84635211 | Msa0579770:CDS |
| GAGGCGTCGTTGTCGGGAGC+GGG | 0.499254 | 4_1:+84632959 | Msa0579770:CDS |
| ACTCTACATCCACCGGTTGA+CGG | 0.501244 | 4_1:-84639110 | None:intergenic |
| ATCAACCATGACAGGCTGAA+TGG | 0.501401 | 4_1:+84639665 | Msa0579770:CDS |
| GGTTGATGTGAGTGACGTGC+TGG | 0.503482 | 4_1:+84634027 | Msa0579770:CDS |
| TTAGTGGCATCTCTCCCAAC+AGG | 0.504049 | 4_1:+84639035 | Msa0579770:CDS |
| CTAGATGTTGAGATCCTGTT+GGG | 0.506394 | 4_1:-84639049 | None:intergenic |
| ATGTCCAGGCATCACATACA+AGG | 0.507495 | 4_1:+84636361 | Msa0579770:intron |
| ACCGGTGGATGTAGAGTTGA+GGG | 0.507516 | 4_1:+84639116 | Msa0579770:CDS |
| ACAGAGGTAATAACCAGAAA+AGG | 0.508756 | 4_1:+84640704 | Msa0579770:CDS |
| TCAACCATGACAGGCTGAAT+GGG | 0.513586 | 4_1:+84639666 | Msa0579770:CDS |
| TTCGGAAAGGAAGTGATGTC+AGG | 0.516012 | 4_1:+84636404 | Msa0579770:CDS |
| GTGTTCCTGGTGCCAACGTT+TGG | 0.517403 | 4_1:+84634531 | Msa0579770:CDS |
| CCAATGCTTCACATCAATCA+TGG | 0.522347 | 4_1:-84639627 | None:intergenic |
| TTTGTTTCAGAAACCTTCAT+GGG | 0.524094 | 4_1:+84634997 | Msa0579770:intron |
| CTTCCATGTTCTGACCTGCA+TGG | 0.529587 | 4_1:-84640822 | None:intergenic |
| TTCCGAAAGATGCGAATAGA+CGG | 0.530820 | 4_1:-84636388 | None:intergenic |
| TCAGAAACCTTCATGGGAGA+AGG | 0.533657 | 4_1:+84635003 | Msa0579770:intron |
| GAAGAGGTAGCTACTTGCGT+TGG | 0.535117 | 4_1:+84632348 | Msa0579770:five_prime_UTR |
| AATGATAATCACAGTTTACA+AGG | 0.535320 | 4_1:+84641323 | Msa0579770:three_prime_UTR |
| ACTCTCATGCGAGTTTGCAT+CGG | 0.538757 | 4_1:+84634006 | Msa0579770:CDS |
| GGGAGCGGGATTATCCATAT+TGG | 0.538779 | 4_1:+84632973 | Msa0579770:CDS |
| GCAAACTCGCATGAGAGTGC+AGG | 0.541593 | 4_1:-84634001 | None:intergenic |
| TCCATGTTCTGACCTGCATG+GGG | 0.543102 | 4_1:-84640820 | None:intergenic |
| GAAAATATGGACTTGACGTA+CGG | 0.547160 | 4_1:-84641401 | None:intergenic |
| AGATATGATCCAGAAATGGA+TGG | 0.550761 | 4_1:+84635159 | Msa0579770:intron |
| TCCTATTTCAGAAGCGACCA+TGG | 0.550761 | 4_1:+84638838 | Msa0579770:CDS |
| CGCTCCCGACAACGACGCCT+CGG | 0.552405 | 4_1:-84632957 | None:intergenic |
| CCATGATTGATGTGAAGCAT+TGG | 0.553335 | 4_1:+84639627 | Msa0579770:CDS |
| CAGTAATAAGCTACAGCTGA+AGG | 0.556577 | 4_1:+84632323 | Msa0579770:five_prime_UTR |
| TGAATATAGAGAAATAGTAC+TGG | 0.563519 | 4_1:+84638532 | Msa0579770:CDS |
| ATCAACACTCGTGATTTGGA+AGG | 0.563638 | 4_1:+84639698 | Msa0579770:CDS |
| GATTCAAAGTTAAGGCCCAC+TGG | 0.566659 | 4_1:+84634220 | Msa0579770:CDS |
| GTCAACAATCACCGATGTAG+AGG | 0.568346 | 4_1:-84633168 | None:intergenic |
| GTGTGAACATTCCTGTTGCA+AGG | 0.569493 | 4_1:+84640780 | Msa0579770:CDS |
| GAGTTTGCTAGCAGAAAGCA+TGG | 0.570930 | 4_1:-84632419 | None:intergenic |
| AAGCATTGGATACCATACTT+AGG | 0.572826 | 4_1:+84639641 | Msa0579770:CDS |
| TCCCTCAACTCTACATCCAC+CGG | 0.573867 | 4_1:-84639117 | None:intergenic |
| AAATATTGTGAACCTTGACT+AGG | 0.573961 | 4_1:-84638906 | None:intergenic |
| AAGGTAGATTGCACTCAAGA+AGG | 0.576864 | 4_1:+84635198 | Msa0579770:CDS |
| ATTGTTGACAAAAGTTCTGA+TGG | 0.579485 | 4_1:+84633182 | Msa0579770:CDS |
| ACTACATAACTCCCAAGGAC+GGG | 0.580701 | 4_1:-84641235 | None:intergenic |
| AGCGGGATTATCCATATTGG+CGG | 0.581957 | 4_1:+84632976 | Msa0579770:CDS |
| TGACTAGGCTTTCTGTATCA+CGG | 0.584070 | 4_1:-84638891 | None:intergenic |
| AATTACCAAACGTTGGCACC+AGG | 0.584514 | 4_1:-84634536 | None:intergenic |
| AGATGCCACTAAAGTCTCCA+TGG | 0.585098 | 4_1:-84639024 | None:intergenic |
| CGAATGAAACTCGGAGCCAG+TGG | 0.587706 | 4_1:-84634236 | None:intergenic |
| GCTACAGCTGAAGGAAGAAG+AGG | 0.588161 | 4_1:+84632332 | Msa0579770:five_prime_UTR |
| TTAGCCGCCTTCTCCCATGA+AGG | 0.590906 | 4_1:-84635010 | None:intergenic |
| TGCGGTTACCACCTCTACAT+CGG | 0.592273 | 4_1:+84633157 | Msa0579770:CDS |
| AACCGGTGGATGTAGAGTTG+AGG | 0.592968 | 4_1:+84639115 | Msa0579770:CDS |
| TCAACACTCGTGATTTGGAA+GGG | 0.594262 | 4_1:+84639699 | Msa0579770:CDS |
| ACCGCCCATTCAGCCTGTCA+TGG | 0.594697 | 4_1:-84639670 | None:intergenic |
| GCTAGATGTTGAGATCCTGT+TGG | 0.602754 | 4_1:-84639050 | None:intergenic |
| TCTATTCGCATCTTTCGGAA+AGG | 0.604827 | 4_1:+84636391 | Msa0579770:CDS |
| TTCACATCAATCATGGCTCT+AGG | 0.606261 | 4_1:-84639620 | None:intergenic |
| CGGCTAAAATAATGAGAGAG+AGG | 0.606873 | 4_1:+84635026 | Msa0579770:CDS |
| ATAAAATAATTACCAAACGT+TGG | 0.610666 | 4_1:-84634543 | None:intergenic |
| GATATGATCCAGAAATGGAT+GGG | 0.611298 | 4_1:+84635160 | Msa0579770:intron |
| ACTTAGGTATCAACCATGAC+AGG | 0.611601 | 4_1:+84639657 | Msa0579770:CDS |
| ACTCATGTTCATGATGTCCA+TGG | 0.615389 | 4_1:-84638855 | None:intergenic |
| AATCGTTCCCGAATGAAACT+CGG | 0.616677 | 4_1:-84634245 | None:intergenic |
| TACTACATAACTCCCAAGGA+CGG | 0.619410 | 4_1:-84641236 | None:intergenic |
| GCTTTGGAGGATAAATCCAA+TGG | 0.620054 | 4_1:+84639071 | Msa0579770:CDS |
| AACAATCACCGATGTAGAGG+TGG | 0.620744 | 4_1:-84633165 | None:intergenic |
| GAATGAAACTCGGAGCCAGT+GGG | 0.636047 | 4_1:-84634235 | None:intergenic |
| AGACCAGCACCGTCAACCGG+TGG | 0.636144 | 4_1:+84639101 | Msa0579770:CDS |
| ACCATGACAGGCTGAATGGG+CGG | 0.638627 | 4_1:+84639669 | Msa0579770:CDS |
| TGATACAGAAAGCCTAGTCA+AGG | 0.642495 | 4_1:+84638894 | Msa0579770:CDS |
| GAAACCTTCATGGGAGAAGG+CGG | 0.644154 | 4_1:+84635006 | Msa0579770:intron |
| GTTGATGTGAGTGACGTGCT+GGG | 0.650967 | 4_1:+84634028 | Msa0579770:CDS |
| AAAGTACTACATAACTCCCA+AGG | 0.652371 | 4_1:-84641240 | None:intergenic |
| AAATGTCTGTGCTATCATTG+GGG | 0.655622 | 4_1:+84640965 | Msa0579770:CDS |
| TATTCAGGTAGTTAAAACAG+AGG | 0.665097 | 4_1:+84640688 | Msa0579770:CDS |
| TGTTATGCAGAATCGAGTCA+AGG | 0.668290 | 4_1:-84641119 | None:intergenic |
| TGTCCAGGCATCACATACAA+GGG | 0.682792 | 4_1:+84636362 | Msa0579770:intron |
| CGTTGGCACCAGGAACACCA+TGG | 0.689733 | 4_1:-84634526 | None:intergenic |
| AAGAAGGTGATTTATGCAGG+AGG | 0.694982 | 4_1:+84635214 | Msa0579770:CDS |
| GGTGGCGAAGAAGAAAGTAA+CGG | 0.700670 | 4_1:-84632398 | None:intergenic |
| CCATGTTCTGACCTGCATGG+GGG | 0.709394 | 4_1:-84640819 | None:intergenic |
| AATGTCTGTGCTATCATTGG+GGG | 0.711828 | 4_1:+84640966 | Msa0579770:CDS |
| TCAAAGTGCTGTGATGTGAG+TGG | 0.721714 | 4_1:-84634325 | None:intergenic |
| TTTGCTAGCAGAAAGCATGG+TGG | 0.767176 | 4_1:-84632416 | None:intergenic |
| AATCCCAAGAGATTTGACCG+AGG | 0.770632 | 4_1:+84632940 | Msa0579770:CDS |
| GTACACAGCACACAGCAGTG+TGG | 0.773884 | 4_1:+84640751 | Msa0579770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATATATTTAATTATA+AGG | + | chr4_1:84636808-84636827 | Msa0579770:intron | 0.0% |
| !! | AAGAAAAGATAAAAAAAAAT+AGG | - | chr4_1:84634569-84634588 | None:intergenic | 10.0% |
| !!! | TTTATTTTTTCAAAAAACTT+TGG | - | chr4_1:84638176-84638195 | None:intergenic | 10.0% |
| !! | TGAAAAAATAAAAAACTAAA+AGG | + | chr4_1:84638184-84638203 | Msa0579770:intron | 10.0% |
| !!! | ATTATGTTGATTATTTCTTA+CGG | - | chr4_1:84632632-84632651 | None:intergenic | 15.0% |
| !! | GAAATAATCAACATAATATT+TGG | + | chr4_1:84632635-84632654 | Msa0579770:intron | 15.0% |
| !! | TTATGAATATTGAATAATTC+AGG | + | chr4_1:84632818-84632837 | Msa0579770:intron | 15.0% |
| !! | CATTTCAATAGTATTATAAA+AGG | - | chr4_1:84632885-84632904 | None:intergenic | 15.0% |
| !! | TAGTAATATATGCAAATTAT+TGG | + | chr4_1:84633326-84633345 | Msa0579770:intron | 15.0% |
| !! | CTAACAATATAATCATTAAA+AGG | + | chr4_1:84633716-84633735 | Msa0579770:intron | 15.0% |
| !! | AAAGACTCAAATTATTATAA+GGG | - | chr4_1:84635598-84635617 | None:intergenic | 15.0% |
| !! | AAAAGACTCAAATTATTATA+AGG | - | chr4_1:84635599-84635618 | None:intergenic | 15.0% |
| !! | CCTATATATAAGAAAAATTT+GGG | - | chr4_1:84636185-84636204 | None:intergenic | 15.0% |
| !! | TCCTATATATAAGAAAAATT+TGG | - | chr4_1:84636186-84636205 | None:intergenic | 15.0% |
| !! | TTCAAATATTCAATGTAAAT+AGG | - | chr4_1:84636484-84636503 | None:intergenic | 15.0% |
| !!! | TTTATTAAGATTTTTACACA+AGG | - | chr4_1:84636598-84636617 | None:intergenic | 15.0% |
| !!! | AATATGTATCCAAATTTTAA+AGG | - | chr4_1:84638012-84638031 | None:intergenic | 15.0% |
| !! | ACTTTCATTAAATGAATTAA+GGG | - | chr4_1:84638068-84638087 | None:intergenic | 15.0% |
| !! | TACTTTCATTAAATGAATTA+AGG | - | chr4_1:84638069-84638088 | None:intergenic | 15.0% |
| !! | AAACATCATTAATTGTATAT+TGG | + | chr4_1:84638137-84638156 | Msa0579770:intron | 15.0% |
| !! | ACATATTATATTGAAAATCT+AGG | - | chr4_1:84639456-84639475 | None:intergenic | 15.0% |
| !! | GAAAGAAATATAAAATGTTT+AGG | + | chr4_1:84639477-84639496 | Msa0579770:intron | 15.0% |
| !! | AGATAAAAATAAACATGATT+GGG | - | chr4_1:84640588-84640607 | None:intergenic | 15.0% |
| !! | TAGATTATTGTATTATAACA+TGG | - | chr4_1:84640643-84640662 | None:intergenic | 15.0% |
| !! | TGTTGAAATTAAAGCATAAT+AGG | - | chr4_1:84632715-84632734 | None:intergenic | 20.0% |
| !!! | GGAACTTAATAATTATTTTG+CGG | + | chr4_1:84633139-84633158 | Msa0579770:intron | 20.0% |
| !!! | ATTTCAATTTCAGGTAATAA+CGG | + | chr4_1:84633222-84633241 | Msa0579770:intron | 20.0% |
| !! | TAATATATGCAAATTATTGG+CGG | + | chr4_1:84633329-84633348 | Msa0579770:intron | 20.0% |
| !! | AATATAATCATTAAAAGGCT+GGG | + | chr4_1:84633721-84633740 | Msa0579770:intron | 20.0% |
| !! | AACATACTGATAATATTACT+AGG | - | chr4_1:84633897-84633916 | None:intergenic | 20.0% |
| !!! | ATTCCTCTATTTCTTTTTTT+TGG | + | chr4_1:84633949-84633968 | Msa0579770:intron | 20.0% |
| !!! | TTTCTATTGATTCAAAGTTA+AGG | + | chr4_1:84634212-84634231 | Msa0579770:CDS | 20.0% |
| !! | AAATGAATCAATATGAATCT+TGG | - | chr4_1:84634375-84634394 | None:intergenic | 20.0% |
| !! | ATCATTAAAAATGGTGTAAA+AGG | - | chr4_1:84634465-84634484 | None:intergenic | 20.0% |
| !! | TGCAAAAAGATCATTAAAAA+TGG | - | chr4_1:84634474-84634493 | None:intergenic | 20.0% |
| !!! | ATTTTTAATGATCTTTTTGC+AGG | + | chr4_1:84634473-84634492 | Msa0579770:intron | 20.0% |
| !! | TAAAAATTTACAACTGTGAT+TGG | - | chr4_1:84634502-84634521 | None:intergenic | 20.0% |
| !! | ATAAAATAATTACCAAACGT+TGG | - | chr4_1:84634546-84634565 | None:intergenic | 20.0% |
| !!! | TTTTATCTTTTCTTTACTTC+AGG | + | chr4_1:84634575-84634594 | Msa0579770:intron | 20.0% |
| !!! | TTATTTTCTTCAATGAATGA+TGG | + | chr4_1:84634925-84634944 | Msa0579770:intron | 20.0% |
| !!! | TTACATAGTTTTCTACTTAT+CGG | + | chr4_1:84635277-84635296 | Msa0579770:intron | 20.0% |
| !! | TGAAAACATGAGTAAAAATA+AGG | + | chr4_1:84635738-84635757 | Msa0579770:intron | 20.0% |
| !! | TTTAAAAGAAATCCATCAAT+TGG | + | chr4_1:84635828-84635847 | Msa0579770:intron | 20.0% |
| !! | TTAAAAGAAATCCATCAATT+GGG | + | chr4_1:84635829-84635848 | Msa0579770:intron | 20.0% |
| !! | TCTAAAAGATTTCATGTTAT+AGG | + | chr4_1:84636023-84636042 | Msa0579770:intron | 20.0% |
| !!! | CCCAAATTTTTCTTATATAT+AGG | + | chr4_1:84636182-84636201 | Msa0579770:intron | 20.0% |
| !!! | ATTTTTCTTATATATAGGAC+CGG | + | chr4_1:84636187-84636206 | Msa0579770:intron | 20.0% |
| !!! | AATTTTGTTATTTTCTGTCT+TGG | + | chr4_1:84636271-84636290 | Msa0579770:intron | 20.0% |
| !! | TAGGAAATTTGTATCAAATA+CGG | - | chr4_1:84636465-84636484 | None:intergenic | 20.0% |
| !! | CGTATATAAATATCCAAAAA+GGG | - | chr4_1:84636640-84636659 | None:intergenic | 20.0% |
| !! | ACGTATATAAATATCCAAAA+AGG | - | chr4_1:84636641-84636660 | None:intergenic | 20.0% |
| !! | ATTCTAACAAGATTTCAATT+TGG | - | chr4_1:84636780-84636799 | None:intergenic | 20.0% |
| !! | AAGGATTAGAATCATAATTT+AGG | + | chr4_1:84636827-84636846 | Msa0579770:intron | 20.0% |
| !! | CTACCTGATTTATTAATTAA+CGG | + | chr4_1:84637043-84637062 | Msa0579770:intron | 20.0% |
| !! | TGAACAATATAAAATCTTTC+CGG | - | chr4_1:84637254-84637273 | None:intergenic | 20.0% |
| !!! | TTGTTTTATTTCAATTGCTA+TGG | + | chr4_1:84637506-84637525 | Msa0579770:intron | 20.0% |
| !! | TAGAGAAAATATAAACAACA+GGG | - | chr4_1:84637861-84637880 | None:intergenic | 20.0% |
| !! | ATAGAGAAAATATAAACAAC+AGG | - | chr4_1:84637862-84637881 | None:intergenic | 20.0% |
| !! | TTAAATGAATTAAGGGTAAA+AGG | - | chr4_1:84638061-84638080 | None:intergenic | 20.0% |
| !!! | ATTTATTTAATGCATGCTTT+TGG | + | chr4_1:84638091-84638110 | Msa0579770:intron | 20.0% |
| !!! | ACAAAATCATTTTGTGAAAT+TGG | + | chr4_1:84638362-84638381 | Msa0579770:intron | 20.0% |
| !! | ACTGAAAAAGAATATAAAAC+TGG | + | chr4_1:84638440-84638459 | Msa0579770:intron | 20.0% |
| !! | TCAAACAAATATGATTGAAT+AGG | - | chr4_1:84638710-84638729 | None:intergenic | 20.0% |
| !!! | GATTTTTGATTTTTTGCATT+CGG | + | chr4_1:84638787-84638806 | Msa0579770:intron | 20.0% |
| !!! | AAGAGTTTTTCTAAAACATA+AGG | - | chr4_1:84639189-84639208 | None:intergenic | 20.0% |
| !!! | TGAAGTGTCTATTTTTTAAA+TGG | - | chr4_1:84639344-84639363 | None:intergenic | 20.0% |
| !! | AAATTCACTGAAAAAGAATA+GGG | + | chr4_1:84639406-84639425 | Msa0579770:intron | 20.0% |
| !! | TATTATATTGAAAATCTAGG+AGG | - | chr4_1:84639453-84639472 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTATATTTAAGTC+TGG | - | chr4_1:84640254-84640273 | None:intergenic | 20.0% |
| !! | CAGATAAAAATAAACATGAT+TGG | - | chr4_1:84640589-84640608 | None:intergenic | 20.0% |
| !!! | GATTAATTTATAACCTTTTC+TGG | - | chr4_1:84640720-84640739 | None:intergenic | 20.0% |
| !! | TCATGGTTCAAATATATATA+CGG | + | chr4_1:84640845-84640864 | Msa0579770:intron | 20.0% |
| !!! | AATTTTTTTCATTGCCTTAA+TGG | - | chr4_1:84641145-84641164 | None:intergenic | 20.0% |
| ! | TTGTAACCTGTAAAAATCAA+CGG | - | chr4_1:84632449-84632468 | None:intergenic | 25.0% |
| ! | GCAAAATTCAAAAGTAATTG+AGG | - | chr4_1:84632530-84632549 | None:intergenic | 25.0% |
| ! | AAATAGGTATTTGTCGTATT+TGG | + | chr4_1:84633245-84633264 | Msa0579770:intron | 25.0% |
| !!! | TTGGTTAAATATGTTGTTTC+TGG | + | chr4_1:84633264-84633283 | Msa0579770:intron | 25.0% |
| !!! | TTAAATATGTTGTTTCTGGA+AGG | + | chr4_1:84633268-84633287 | Msa0579770:intron | 25.0% |
| ! | AATATATGCAAATTATTGGC+GGG | + | chr4_1:84633330-84633349 | Msa0579770:intron | 25.0% |
| ! | GAATACAGAAATGTTCAATA+AGG | + | chr4_1:84633439-84633458 | Msa0579770:intron | 25.0% |
| ! | AATGATCATGTGTCAATAAA+AGG | - | chr4_1:84633649-84633668 | None:intergenic | 25.0% |
| !!! | ACACATGATCATTTTAGTAT+CGG | + | chr4_1:84633656-84633675 | Msa0579770:intron | 25.0% |
| ! | CAATATAATCATTAAAAGGC+TGG | + | chr4_1:84633720-84633739 | Msa0579770:intron | 25.0% |
| ! | ATATAATCATTAAAAGGCTG+GGG | + | chr4_1:84633722-84633741 | Msa0579770:intron | 25.0% |
| !!! | CTTTTAGAAAAACAGATGAA+GGG | - | chr4_1:84633834-84633853 | None:intergenic | 25.0% |
| !!! | ACTTTTAGAAAAACAGATGA+AGG | - | chr4_1:84633835-84633854 | None:intergenic | 25.0% |
| ! | AAGTAAGAGGTAAAAAATGA+GGG | - | chr4_1:84634154-84634173 | None:intergenic | 25.0% |
| ! | TAAGTAAGAGGTAAAAAATG+AGG | - | chr4_1:84634155-84634174 | None:intergenic | 25.0% |
| !!! | TTTTTTCCACTTGAAATACA+CGG | + | chr4_1:84634429-84634448 | Msa0579770:intron | 25.0% |
| !! | TTGTAAATTTTTATGCACCA+TGG | + | chr4_1:84634509-84634528 | Msa0579770:CDS | 25.0% |
| ! | TTTCTTTACTTCAGGAAATA+AGG | + | chr4_1:84634583-84634602 | Msa0579770:intron | 25.0% |
| ! | TTCTTTACTTCAGGAAATAA+GGG | + | chr4_1:84634584-84634603 | Msa0579770:intron | 25.0% |
| ! | TAGGAAATAACAAATACATC+AGG | - | chr4_1:84634615-84634634 | None:intergenic | 25.0% |
| !!! | GTATTTGTTATTTCCTACAT+TGG | + | chr4_1:84634618-84634637 | Msa0579770:intron | 25.0% |
| !! | AAAACGAGATATATCTTTTG+AGG | - | chr4_1:84634677-84634696 | None:intergenic | 25.0% |
| !! | ATTGGTCCATTTAAGATTAT+TGG | + | chr4_1:84634836-84634855 | Msa0579770:intron | 25.0% |
| ! | ATTTAGATATGATCCAGAAA+TGG | + | chr4_1:84635155-84635174 | Msa0579770:intron | 25.0% |
| !!! | TTTACTGTTTTTCTTACTTG+TGG | + | chr4_1:84635253-84635272 | Msa0579770:intron | 25.0% |
| !!! | TATCTAAGCACTTATTTTCA+AGG | - | chr4_1:84635342-84635361 | None:intergenic | 25.0% |
| ! | GTTATCTAAGTAGAAAAAGA+AGG | + | chr4_1:84635406-84635425 | Msa0579770:intron | 25.0% |
| ! | TCATATCATCTATTAAGAAG+TGG | + | chr4_1:84635558-84635577 | Msa0579770:intron | 25.0% |
| ! | TTAGGTATTACTAGATACTA+AGG | + | chr4_1:84635646-84635665 | Msa0579770:intron | 25.0% |
| ! | GACAATTGAGAATAAATCTT+TGG | + | chr4_1:84635851-84635870 | Msa0579770:intron | 25.0% |
| !!! | TTGGTTTTTATACCGTTAAT+TGG | + | chr4_1:84635870-84635889 | Msa0579770:intron | 25.0% |
| !! | TTTCTAGTAGATCCAATTAA+CGG | - | chr4_1:84635885-84635904 | None:intergenic | 25.0% |
| !!! | TATTGATTCCTTTAGATTCA+AGG | + | chr4_1:84635913-84635932 | Msa0579770:intron | 25.0% |
| ! | AAACTAAACCTTGAATCTAA+AGG | - | chr4_1:84635924-84635943 | None:intergenic | 25.0% |
| !!! | TAGAGATTTTTAGCATAGTT+TGG | + | chr4_1:84636051-84636070 | Msa0579770:intron | 25.0% |
| ! | ACATTGAAAATGAGAAACAA+TGG | - | chr4_1:84636345-84636364 | None:intergenic | 25.0% |
| ! | ATAAATCAGGTAGATATTGT+AGG | - | chr4_1:84637036-84637055 | None:intergenic | 25.0% |
| ! | ATATCCTCGTTTGATTATAT+TGG | + | chr4_1:84637581-84637600 | Msa0579770:intron | 25.0% |
| ! | TATCCTCGTTTGATTATATT+GGG | + | chr4_1:84637582-84637601 | Msa0579770:intron | 25.0% |
| ! | AAGCTGTGTAGTTTATTATA+AGG | + | chr4_1:84637936-84637955 | Msa0579770:intron | 25.0% |
| !!! | TTTTAAAGGACCAAAGATTA+GGG | - | chr4_1:84637998-84638017 | None:intergenic | 25.0% |
| !!! | ATTTTAAAGGACCAAAGATT+AGG | - | chr4_1:84637999-84638018 | None:intergenic | 25.0% |
| !!! | ATCTTTGGTCCTTTAAAATT+TGG | + | chr4_1:84638000-84638019 | Msa0579770:intron | 25.0% |
| ! | ATGCTATTGTAAATAGATGT+GGG | + | chr4_1:84638262-84638281 | Msa0579770:intron | 25.0% |
| ! | TTGATTGAATTATGTGTGAA+AGG | + | chr4_1:84638302-84638321 | Msa0579770:intron | 25.0% |
| !!! | TATTCTTTTTCAGTCAATAG+CGG | - | chr4_1:84638434-84638453 | None:intergenic | 25.0% |
| !!! | TGGAAACTATTTCTGTATTA+TGG | + | chr4_1:84638483-84638502 | Msa0579770:intron | 25.0% |
| ! | TGAATATAGAGAAATAGTAC+TGG | + | chr4_1:84638532-84638551 | Msa0579770:CDS | 25.0% |
| ! | TGAAAAACCTCTATATACAT+AGG | - | chr4_1:84638684-84638703 | None:intergenic | 25.0% |
| !! | AATTTAACTTTACAGTAGAC+TGG | + | chr4_1:84638956-84638975 | Msa0579770:intron | 25.0% |
| !!! | TTTCTAAAACATAAGGTTGA+AGG | - | chr4_1:84639182-84639201 | None:intergenic | 25.0% |
| ! | TCTGTTAATACTAAAATCAC+TGG | + | chr4_1:84639364-84639383 | Msa0579770:intron | 25.0% |
| !!! | CTATTCTTTTTCAGTGAATT+TGG | - | chr4_1:84639407-84639426 | None:intergenic | 25.0% |
| ! | CAAATTCACTGAAAAAGAAT+AGG | + | chr4_1:84639405-84639424 | Msa0579770:intron | 25.0% |
| ! | AATTCACTGAAAAAGAATAG+GGG | + | chr4_1:84639407-84639426 | Msa0579770:intron | 25.0% |
| !!! | CTTTTTTTCCAAAAGATAGA+TGG | - | chr4_1:84639595-84639614 | None:intergenic | 25.0% |
| !!! | TGTTGGATTGCATATTTTTA+CGG | + | chr4_1:84639811-84639830 | Msa0579770:intron | 25.0% |
| ! | AATAGAACAAAAACTTCATC+AGG | - | chr4_1:84639900-84639919 | None:intergenic | 25.0% |
| !!! | AGATGAGATAGATAGTTTTT+TGG | - | chr4_1:84640029-84640048 | None:intergenic | 25.0% |
| ! | AAAAAACTATCTATCTCATC+TGG | + | chr4_1:84640028-84640047 | Msa0579770:intron | 25.0% |
| !! | TTTTGGTACAAATTACAATG+TGG | + | chr4_1:84640058-84640077 | Msa0579770:intron | 25.0% |
| !! | CTATAAATGTCCAATGTTTT+CGG | + | chr4_1:84640365-84640384 | Msa0579770:intron | 25.0% |
| ! | ATAATAATGACCGAAAACAT+TGG | - | chr4_1:84640378-84640397 | None:intergenic | 25.0% |
| !!! | CATGTTTATTTTTATCTGTG+TGG | + | chr4_1:84640591-84640610 | Msa0579770:intron | 25.0% |
| !!! | ACAATGTATGTTTTGTTATC+AGG | + | chr4_1:84640899-84640918 | Msa0579770:intron | 25.0% |
| ! | TAAAATGTGAAAAAGACTTC+TGG | - | chr4_1:84640941-84640960 | None:intergenic | 25.0% |
| !!! | AGTCTATTTTTTGTGATTTC+AGG | + | chr4_1:84641086-84641105 | Msa0579770:intron | 25.0% |
| ! | GCAATGAAAAAAATTGAGAT+TGG | + | chr4_1:84641150-84641169 | Msa0579770:CDS | 25.0% |
| ! | AATGATAATCACAGTTTACA+AGG | + | chr4_1:84641323-84641342 | Msa0579770:three_prime_UTR | 25.0% |
| !!! | TCTCTCTTTTTTTGTTGTTG+AGG | - | chr4_1:84632242-84632261 | None:intergenic | 30.0% |
| !!! | TCAAATCCGTTGATTTTTAC+AGG | + | chr4_1:84632440-84632459 | Msa0579770:CDS | 30.0% |
| CATTCCAAACAAAAACATCA+TGG | - | chr4_1:84633008-84633027 | None:intergenic | 30.0% | |
| !! | CATGATGTTTTTGTTTGGAA+TGG | + | chr4_1:84633006-84633025 | Msa0579770:CDS | 30.0% |
| ! | TATTGAGTCTTTTACTGCAT+TGG | + | chr4_1:84633073-84633092 | Msa0579770:intron | 30.0% |
| ! | ATTGTTGACAAAAGTTCTGA+TGG | + | chr4_1:84633182-84633201 | Msa0579770:CDS | 30.0% |
| ! | TTTCAGGTAATAACGGAAAT+AGG | + | chr4_1:84633229-84633248 | Msa0579770:intron | 30.0% |
| AGTTAACACGTGAACTTTAA+CGG | - | chr4_1:84633294-84633313 | None:intergenic | 30.0% | |
| ATATATGCAAATTATTGGCG+GGG | + | chr4_1:84633331-84633350 | Msa0579770:intron | 30.0% | |
| ! | TGAGTTATTTGTTACAGCAT+TGG | + | chr4_1:84633493-84633512 | Msa0579770:intron | 30.0% |
| TATAATCATTAAAAGGCTGG+GGG | + | chr4_1:84633723-84633742 | Msa0579770:intron | 30.0% | |
| !!! | GGTTTTTGAAATTGACATGA+CGG | + | chr4_1:84633774-84633793 | Msa0579770:intron | 30.0% |
| !! | CTACAAGTTCTGAATAAGTT+GGG | - | chr4_1:84633869-84633888 | None:intergenic | 30.0% |
| CAGCCAAAAAAAAGAAATAG+AGG | - | chr4_1:84633955-84633974 | None:intergenic | 30.0% | |
| CAGGCTCAATATAACAAAAA+CGG | + | chr4_1:84634180-84634199 | Msa0579770:CDS | 30.0% | |
| TAAATATGTTCAGCTGTAAG+TGG | + | chr4_1:84634348-84634367 | Msa0579770:intron | 30.0% | |
| TGCTAATAGCTGCATATAAT+TGG | + | chr4_1:84634818-84634837 | Msa0579770:intron | 30.0% | |
| CAACTGCCAATAATCTTAAA+TGG | - | chr4_1:84634845-84634864 | None:intergenic | 30.0% | |
| ! | GTATTTCTGTACTTGTTACA+TGG | + | chr4_1:84634958-84634977 | Msa0579770:intron | 30.0% |
| !! | TTTTGTTTCAGAAACCTTCA+TGG | + | chr4_1:84634996-84635015 | Msa0579770:intron | 30.0% |
| TTTGTTTCAGAAACCTTCAT+GGG | + | chr4_1:84634997-84635016 | Msa0579770:intron | 30.0% | |
| AAATGTAATGATACGCATGT+GGG | - | chr4_1:84635134-84635153 | None:intergenic | 30.0% | |
| AAAATGTAATGATACGCATG+TGG | - | chr4_1:84635135-84635154 | None:intergenic | 30.0% | |
| AAGAAGGTAGAATAAAGTTG+TGG | + | chr4_1:84635422-84635441 | Msa0579770:intron | 30.0% | |
| AAAGTTGTGGAGTGTAAAAA+AGG | + | chr4_1:84635435-84635454 | Msa0579770:intron | 30.0% | |
| AAGTTGTGGAGTGTAAAAAA+GGG | + | chr4_1:84635436-84635455 | Msa0579770:intron | 30.0% | |
| ATATATGCTAGTAACATTGC+AGG | + | chr4_1:84635696-84635715 | Msa0579770:intron | 30.0% | |
| TATATGCTAGTAACATTGCA+GGG | + | chr4_1:84635697-84635716 | Msa0579770:intron | 30.0% | |
| TCATTTACGTATTTCTTGTC+TGG | - | chr4_1:84635973-84635992 | None:intergenic | 30.0% | |
| CTGAAATGTCTCTTGTAAAT+AGG | - | chr4_1:84636103-84636122 | None:intergenic | 30.0% | |
| !! | TCAACAAAAGTTGATGTATC+TGG | + | chr4_1:84636123-84636142 | Msa0579770:intron | 30.0% |
| !! | TCAACAAAAGTTGATGTATC+TGG | - | chr4_1:84636123-84636142 | None:intergenic | 30.0% |
| TGTTCTTGCTAAATTGAACA+TGG | + | chr4_1:84636233-84636252 | Msa0579770:intron | 30.0% | |
| TCCAAATCCATTTATGGATA+TGG | - | chr4_1:84636944-84636963 | None:intergenic | 30.0% | |
| CAGCCGTTAATTAATAAATC+AGG | - | chr4_1:84637049-84637068 | None:intergenic | 30.0% | |
| GCTGGATCAATTATAAATAG+AGG | + | chr4_1:84637112-84637131 | Msa0579770:intron | 30.0% | |
| CTCCTATAAAAACTTGTCTT+CGG | + | chr4_1:84637301-84637320 | Msa0579770:intron | 30.0% | |
| ! | AACCGAAGACAAGTTTTTAT+AGG | - | chr4_1:84637306-84637325 | None:intergenic | 30.0% |
| AACTTCAAGGATTCGTATAT+CGG | - | chr4_1:84637448-84637467 | None:intergenic | 30.0% | |
| AAATTCCATTGAAGAAGACA+GGG | - | chr4_1:84637734-84637753 | None:intergenic | 30.0% | |
| AAAATTCCATTGAAGAAGAC+AGG | - | chr4_1:84637735-84637754 | None:intergenic | 30.0% | |
| !!! | CATGCTTTTGGTTTTTGTAA+GGG | + | chr4_1:84638103-84638122 | Msa0579770:intron | 30.0% |
| ACTAAAAGGACCAAAGATTA+TGG | + | chr4_1:84638198-84638217 | Msa0579770:intron | 30.0% | |
| CATGCTATTGTAAATAGATG+TGG | + | chr4_1:84638261-84638280 | Msa0579770:intron | 30.0% | |
| ! | TGTATTCCTATAGCATTTTG+TGG | + | chr4_1:84638463-84638482 | Msa0579770:intron | 30.0% |
| TAGTTTCCACAAAATGCTAT+AGG | - | chr4_1:84638472-84638491 | None:intergenic | 30.0% | |
| !! | GTCGATTCTTTTATAATGAC+TGG | + | chr4_1:84638652-84638671 | Msa0579770:intron | 30.0% |
| AAATATTGTGAACCTTGACT+AGG | - | chr4_1:84638909-84638928 | None:intergenic | 30.0% | |
| GAAGTCAGGTTAAATTACAT+GGG | - | chr4_1:84638992-84639011 | None:intergenic | 30.0% | |
| AGAAGTCAGGTTAAATTACA+TGG | - | chr4_1:84638993-84639012 | None:intergenic | 30.0% | |
| ! | TAAAATGTTTAGGACATTGC+AGG | + | chr4_1:84639487-84639506 | Msa0579770:intron | 30.0% |
| CTTCACTATTGGAATTTGTA+TGG | + | chr4_1:84639777-84639796 | Msa0579770:intron | 30.0% | |
| !! | GTTGGATTGCATATTTTTAC+GGG | + | chr4_1:84639812-84639831 | Msa0579770:intron | 30.0% |
| !! | TTGCATATTTTTACGGGATA+AGG | + | chr4_1:84639818-84639837 | Msa0579770:intron | 30.0% |
| CAGTTTCTTAATCTTGCAAA+TGG | - | chr4_1:84639855-84639874 | None:intergenic | 30.0% | |
| GGCATTATAGAATGAAAGAA+AGG | - | chr4_1:84639932-84639951 | None:intergenic | 30.0% | |
| ! | TCTCATCTGGAAAATCATTT+TGG | + | chr4_1:84640041-84640060 | Msa0579770:intron | 30.0% |
| ACTTCACTAAGCATAAACAT+GGG | + | chr4_1:84640167-84640186 | Msa0579770:intron | 30.0% | |
| GACTTAAATGTACATGTACT+TGG | - | chr4_1:84640304-84640323 | None:intergenic | 30.0% | |
| !! | GCATATTGATTTCTTTCAGT+AGG | - | chr4_1:84640448-84640467 | None:intergenic | 30.0% |
| TGAAAGAAATCAATATGCAG+TGG | + | chr4_1:84640450-84640469 | Msa0579770:intron | 30.0% | |
| TATTCAGGTAGTTAAAACAG+AGG | + | chr4_1:84640688-84640707 | Msa0579770:CDS | 30.0% | |
| ! | GGCAAGAATTTTTGATAGAT+AGG | + | chr4_1:84641171-84641190 | Msa0579770:exon | 30.0% |
| AATCACAGTTTACAAGGATA+AGG | + | chr4_1:84641329-84641348 | Msa0579770:three_prime_UTR | 30.0% | |
| ATCACAGTTTACAAGGATAA+GGG | + | chr4_1:84641330-84641349 | Msa0579770:three_prime_UTR | 30.0% | |
| ACTGAACTGATAAGGTATAT+TGG | + | chr4_1:84641371-84641390 | Msa0579770:three_prime_UTR | 30.0% | |
| ! | TCGATTCGAATCTCTTTGAA+AGG | - | chr4_1:84632600-84632619 | None:intergenic | 35.0% |
| TATTACACCGACATAACCAT+AGG | + | chr4_1:84632784-84632803 | Msa0579770:intron | 35.0% | |
| ATTACACCGACATAACCATA+GGG | + | chr4_1:84632785-84632804 | Msa0579770:intron | 35.0% | |
| CATAAAATTCACATCCCCTA+TGG | - | chr4_1:84632803-84632822 | None:intergenic | 35.0% | |
| ! | TTGTCTTGCAATCTTGTTTC+AGG | + | chr4_1:84633118-84633137 | Msa0579770:intron | 35.0% |
| !! | TGCGTATCGATTTCAATTTC+AGG | + | chr4_1:84633213-84633232 | Msa0579770:CDS | 35.0% |
| TCTGTTGTAAGTCAAAACTC+AGG | - | chr4_1:84633368-84633387 | None:intergenic | 35.0% | |
| GATGCTTGAAATACTCTTGT+AGG | + | chr4_1:84633561-84633580 | Msa0579770:intron | 35.0% | |
| AGTTTGAAAATGAGCGTGAA+AGG | - | chr4_1:84633613-84633632 | None:intergenic | 35.0% | |
| ! | GCTCATTTTCAAACTGAGTA+TGG | + | chr4_1:84633618-84633637 | Msa0579770:intron | 35.0% |
| ! | TTTTCAAACTGAGTATGGCT+AGG | + | chr4_1:84633623-84633642 | Msa0579770:intron | 35.0% |
| TATCGGATCGTTGTTGAAAT+TGG | + | chr4_1:84633673-84633692 | Msa0579770:intron | 35.0% | |
| ATCGGATCGTTGTTGAAATT+GGG | + | chr4_1:84633674-84633693 | Msa0579770:intron | 35.0% | |
| AGATGAAGGGTAATTGATGA+AGG | - | chr4_1:84633821-84633840 | None:intergenic | 35.0% | |
| !! | GCTACAAGTTCTGAATAAGT+TGG | - | chr4_1:84633870-84633889 | None:intergenic | 35.0% |
| TTACCTCTTACTTACAGAAC+AGG | + | chr4_1:84634161-84634180 | Msa0579770:intron | 35.0% | |
| TAACAACCGTGTATTTCAAG+TGG | - | chr4_1:84634438-84634457 | None:intergenic | 35.0% | |
| AAAGAAACAGAAGCCAATGT+AGG | - | chr4_1:84634634-84634653 | None:intergenic | 35.0% | |
| !! | GGCTTCTGTTTCTTTTTCAT+TGG | + | chr4_1:84634639-84634658 | Msa0579770:intron | 35.0% |
| ! | TTTAGTTACAAGCCTTGTAG+CGG | + | chr4_1:84634694-84634713 | Msa0579770:intron | 35.0% |
| CACTACTGAAATGTATCTGA+TGG | - | chr4_1:84634756-84634775 | None:intergenic | 35.0% | |
| ACATTGAATTAGCAGAGTGA+GGG | - | chr4_1:84635111-84635130 | None:intergenic | 35.0% | |
| AGATATGATCCAGAAATGGA+TGG | + | chr4_1:84635159-84635178 | Msa0579770:intron | 35.0% | |
| GATATGATCCAGAAATGGAT+GGG | + | chr4_1:84635160-84635179 | Msa0579770:intron | 35.0% | |
| ACTTGGAATGGAGAAAGAAA+AGG | + | chr4_1:84635369-84635388 | Msa0579770:intron | 35.0% | |
| CTTGGAATGGAGAAAGAAAA+GGG | + | chr4_1:84635370-84635389 | Msa0579770:intron | 35.0% | |
| AGTTGTGGAGTGTAAAAAAG+GGG | + | chr4_1:84635437-84635456 | Msa0579770:intron | 35.0% | |
| !! | GTCTTTTGAAGAGGAAATGT+TGG | + | chr4_1:84635467-84635486 | Msa0579770:intron | 35.0% |
| TTCTCAATTGTCCCAATTGA+TGG | - | chr4_1:84635843-84635862 | None:intergenic | 35.0% | |
| TTACGTATTTCTTGTCTGGA+AGG | - | chr4_1:84635969-84635988 | None:intergenic | 35.0% | |
| AAGAAAACAAATACTCCCTC+CGG | + | chr4_1:84636076-84636095 | Msa0579770:intron | 35.0% | |
| ATGTCTCTTGTAAATAGGAC+CGG | - | chr4_1:84636098-84636117 | None:intergenic | 35.0% | |
| TTTCTTATATATAGGACCGG+AGG | + | chr4_1:84636190-84636209 | Msa0579770:intron | 35.0% | |
| TTCTTATATATAGGACCGGA+GGG | + | chr4_1:84636191-84636210 | Msa0579770:intron | 35.0% | |
| ACAATGGCAAAAGAATCAGA+TGG | - | chr4_1:84636329-84636348 | None:intergenic | 35.0% | |
| ! | GTTTCTCATTTTCAATGTCC+AGG | + | chr4_1:84636347-84636366 | Msa0579770:intron | 35.0% |
| TGTGAAAGGCAAAAAACCTA+TGG | - | chr4_1:84636706-84636725 | None:intergenic | 35.0% | |
| ! | CCACTCTCATATTTTGTGAA+AGG | - | chr4_1:84636720-84636739 | None:intergenic | 35.0% |
| CCTTTCACAAAATATGAGAG+TGG | + | chr4_1:84636717-84636736 | Msa0579770:intron | 35.0% | |
| ! | AACTCATCTAGAATGTGTGT+AGG | + | chr4_1:84636746-84636765 | Msa0579770:intron | 35.0% |
| ! | ACTCATCTAGAATGTGTGTA+GGG | + | chr4_1:84636747-84636766 | Msa0579770:intron | 35.0% |
| ! | GCCATATCCATAAATGGATT+TGG | + | chr4_1:84636940-84636959 | Msa0579770:intron | 35.0% |
| ! | GATTTGCTCACTTTACACTT+TGG | - | chr4_1:84636971-84636990 | None:intergenic | 35.0% |
| AGTGTAAAGTGAGCAAATCA+AGG | + | chr4_1:84636972-84636991 | Msa0579770:intron | 35.0% | |
| GTGTAAAGTGAGCAAATCAA+GGG | + | chr4_1:84636973-84636992 | Msa0579770:intron | 35.0% | |
| CTAAAGTGAGTTCACTTTAG+AGG | + | chr4_1:84637088-84637107 | Msa0579770:intron | 35.0% | |
| TATCAGAGCTATGTGACAAT+TGG | + | chr4_1:84637180-84637199 | Msa0579770:intron | 35.0% | |
| ATCAGAGCTATGTGACAATT+GGG | + | chr4_1:84637181-84637200 | Msa0579770:intron | 35.0% | |
| ! | AAGTTTTTATAGGAGGCTCA+CGG | - | chr4_1:84637296-84637315 | None:intergenic | 35.0% |
| ! | CGAAGACAAGTTTTTATAGG+AGG | - | chr4_1:84637303-84637322 | None:intergenic | 35.0% |
| ACTTCAAGGATTCGTATATC+GGG | - | chr4_1:84637447-84637466 | None:intergenic | 35.0% | |
| GCTATGGAAATATCAACTTC+TGG | + | chr4_1:84637522-84637541 | Msa0579770:intron | 35.0% | |
| GTTCAGTTTACTATTCCTTC+AGG | - | chr4_1:84637556-84637575 | None:intergenic | 35.0% | |
| !!! | GCATGCTTTTGGTTTTTGTA+AGG | + | chr4_1:84638102-84638121 | Msa0579770:intron | 35.0% |
| !!! | GGTTTTTGTAAGGGTACTAA+AGG | + | chr4_1:84638112-84638131 | Msa0579770:intron | 35.0% |
| AGGTAATGAGAATTCTTCAC+TGG | + | chr4_1:84638322-84638341 | Msa0579770:intron | 35.0% | |
| CTATATTCAGCTGATCTACT+GGG | - | chr4_1:84638521-84638540 | None:intergenic | 35.0% | |
| TCTATATTCAGCTGATCTAC+TGG | - | chr4_1:84638522-84638541 | None:intergenic | 35.0% | |
| ACTGGTAAGTAAAGCTAAGT+TGG | + | chr4_1:84638550-84638569 | Msa0579770:intron | 35.0% | |
| !! | GCTAAGTTGGTGAAATTATC+AGG | + | chr4_1:84638563-84638582 | Msa0579770:intron | 35.0% |
| CGTCTCATGAATCAATTACT+AGG | + | chr4_1:84638622-84638641 | Msa0579770:intron | 35.0% | |
| GTTCTCTCCTATGTATATAG+AGG | + | chr4_1:84638674-84638693 | Msa0579770:intron | 35.0% | |
| CATGAACATGAGTCCTATTA+CGG | + | chr4_1:84638865-84638884 | Msa0579770:CDS | 35.0% | |
| CTGATGTGACTTGAATTAAG+TGG | + | chr4_1:84639224-84639243 | Msa0579770:intron | 35.0% | |
| !! | TAAGTGGTCTTATATTTCGC+TGG | + | chr4_1:84639240-84639259 | Msa0579770:intron | 35.0% |
| ATAGGGGAAGTAACATTTCT+AGG | + | chr4_1:84639423-84639442 | Msa0579770:intron | 35.0% | |
| ! | GTCATCAACCATCTATCTTT+TGG | + | chr4_1:84639584-84639603 | Msa0579770:CDS | 35.0% |
| !! | AAGCATTGGATACCATACTT+AGG | + | chr4_1:84639641-84639660 | Msa0579770:CDS | 35.0% |
| ! | TCATGGTTGATACCTAAGTA+TGG | - | chr4_1:84639656-84639675 | None:intergenic | 35.0% |
| ATTCATCAACACTCGTGATT+TGG | + | chr4_1:84639694-84639713 | Msa0579770:CDS | 35.0% | |
| GTATGGTTGCTATAGAATGT+TGG | + | chr4_1:84639794-84639813 | Msa0579770:intron | 35.0% | |
| CACTCAAACCATCATAAACT+CGG | + | chr4_1:84639963-84639982 | Msa0579770:intron | 35.0% | |
| AAACCATCATAAACTCGGTT+GGG | + | chr4_1:84639968-84639987 | Msa0579770:intron | 35.0% | |
| GTTAAAGAGAAGGACCATTA+AGG | - | chr4_1:84639994-84640013 | None:intergenic | 35.0% | |
| !!! | AGTTTTTTGGCTGATTGACA+GGG | - | chr4_1:84640016-84640035 | None:intergenic | 35.0% |
| !!! | TAGTTTTTTGGCTGATTGAC+AGG | - | chr4_1:84640017-84640036 | None:intergenic | 35.0% |
| TTGAGGAACTTGACAACATA+GGG | - | chr4_1:84640132-84640151 | None:intergenic | 35.0% | |
| CACTTCACTAAGCATAAACA+TGG | + | chr4_1:84640166-84640185 | Msa0579770:intron | 35.0% | |
| ! | ACGCGTTTAAAATTCTAACG+TGG | - | chr4_1:84640209-84640228 | None:intergenic | 35.0% |
| ACATGTACATTTAAGTCCAG+AGG | + | chr4_1:84640307-84640326 | Msa0579770:intron | 35.0% | |
| CATGTACATTTAAGTCCAGA+GGG | + | chr4_1:84640308-84640327 | Msa0579770:intron | 35.0% | |
| GTTGTATTGTGTTATCTCAG+TGG | - | chr4_1:84640534-84640553 | None:intergenic | 35.0% | |
| ! | GCAGATAGAGCATTATATTC+AGG | + | chr4_1:84640673-84640692 | Msa0579770:intron | 35.0% |
| ACAGAGGTAATAACCAGAAA+AGG | + | chr4_1:84640704-84640723 | Msa0579770:CDS | 35.0% | |
| ACAAATGTCTGTGCTATCAT+TGG | + | chr4_1:84640963-84640982 | Msa0579770:CDS | 35.0% | |
| CAAATGTCTGTGCTATCATT+GGG | + | chr4_1:84640964-84640983 | Msa0579770:CDS | 35.0% | |
| AAATGTCTGTGCTATCATTG+GGG | + | chr4_1:84640965-84640984 | Msa0579770:CDS | 35.0% | |
| !! | TTTTTGTGATTTCAGGTAGC+TGG | + | chr4_1:84641093-84641112 | Msa0579770:intron | 35.0% |
| GATTCTGCATAACACCATTA+AGG | + | chr4_1:84641128-84641147 | Msa0579770:CDS | 35.0% | |
| !! | ATTTTGTTATAACCCGTCCT+TGG | + | chr4_1:84641223-84641242 | Msa0579770:three_prime_UTR | 35.0% |
| !! | TTTTGTTATAACCCGTCCTT+GGG | + | chr4_1:84641224-84641243 | Msa0579770:three_prime_UTR | 35.0% |
| ! | AAAGTACTACATAACTCCCA+AGG | - | chr4_1:84641243-84641262 | None:intergenic | 35.0% |
| CATAATGCACTGAACTGATA+AGG | + | chr4_1:84641363-84641382 | Msa0579770:three_prime_UTR | 35.0% | |
| GAAAATATGGACTTGACGTA+CGG | - | chr4_1:84641404-84641423 | None:intergenic | 35.0% | |
| CAGTAATAAGCTACAGCTGA+AGG | + | chr4_1:84632323-84632342 | Msa0579770:five_prime_UTR | 40.0% | |
| TTACACCGACATAACCATAG+GGG | + | chr4_1:84632786-84632805 | Msa0579770:intron | 40.0% | |
| !! | CTCGCCATGATGTTTTTGTT+TGG | + | chr4_1:84633001-84633020 | Msa0579770:CDS | 40.0% |
| GCTTGAAATACTCTTGTAGG+AGG | + | chr4_1:84633564-84633583 | Msa0579770:intron | 40.0% | |
| ATCGTTGTTGAAATTGGGAG+TGG | + | chr4_1:84633679-84633698 | Msa0579770:intron | 40.0% | |
| TCGTTGTTGAAATTGGGAGT+GGG | + | chr4_1:84633680-84633699 | Msa0579770:intron | 40.0% | |
| TGATACTTGACGTGTAGTGA+TGG | + | chr4_1:84633753-84633772 | Msa0579770:intron | 40.0% | |
| ! | AATTGATGAAGGCATAGCCT+TGG | - | chr4_1:84633810-84633829 | None:intergenic | 40.0% |
| ! | TGAATAAGTTGGGAGTGAGA+TGG | - | chr4_1:84633859-84633878 | None:intergenic | 40.0% |
| GGACTAATACCAAAACGTCA+GGG | - | chr4_1:84634133-84634152 | None:intergenic | 40.0% | |
| AATCGTTCCCGAATGAAACT+CGG | - | chr4_1:84634248-84634267 | None:intergenic | 40.0% | |
| GTAGACACAGACTTTGTTGA+AGG | + | chr4_1:84634295-84634314 | Msa0579770:CDS | 40.0% | |
| ! | CTGAAATGTATCTGATGGTG+AGG | - | chr4_1:84634751-84634770 | None:intergenic | 40.0% |
| CGGCTAAAATAATGAGAGAG+AGG | + | chr4_1:84635026-84635045 | Msa0579770:CDS | 40.0% | |
| GACATTGAATTAGCAGAGTG+AGG | - | chr4_1:84635112-84635131 | None:intergenic | 40.0% | |
| ! | AATGGATGGGCGTATTCTTT+TGG | + | chr4_1:84635173-84635192 | Msa0579770:CDS | 40.0% |
| AAGGTAGATTGCACTCAAGA+AGG | + | chr4_1:84635198-84635217 | Msa0579770:CDS | 40.0% | |
| CTCAAGAAGGTGATTTATGC+AGG | + | chr4_1:84635211-84635230 | Msa0579770:CDS | 40.0% | |
| AAGAAGGTGATTTATGCAGG+AGG | + | chr4_1:84635214-84635233 | Msa0579770:CDS | 40.0% | |
| TGCTTAGATACTGACGAACT+TGG | + | chr4_1:84635352-84635371 | Msa0579770:intron | 40.0% | |
| AGATACTGACGAACTTGGAA+TGG | + | chr4_1:84635357-84635376 | Msa0579770:intron | 40.0% | |
| AGAAAAGGGTGAGATAGACT+TGG | + | chr4_1:84635384-84635403 | Msa0579770:intron | 40.0% | |
| GTTGTGGAGTGTAAAAAAGG+GGG | + | chr4_1:84635438-84635457 | Msa0579770:intron | 40.0% | |
| !! | GGGATAACAGTCTTTTGAAG+AGG | + | chr4_1:84635458-84635477 | Msa0579770:intron | 40.0% |
| AATGTTGGACAGAACTCGAA+AGG | + | chr4_1:84635482-84635501 | Msa0579770:intron | 40.0% | |
| ! | GAGTGGGTTCTTTCCATATT+TGG | + | chr4_1:84635514-84635533 | Msa0579770:intron | 40.0% |
| AGCATTTCTCTTCGCTCAAA+TGG | + | chr4_1:84635798-84635817 | Msa0579770:intron | 40.0% | |
| ATCCGTCTATTCGCATCTTT+CGG | + | chr4_1:84636386-84636405 | Msa0579770:CDS | 40.0% | |
| TTCCGAAAGATGCGAATAGA+CGG | - | chr4_1:84636391-84636410 | None:intergenic | 40.0% | |
| TCTATTCGCATCTTTCGGAA+AGG | + | chr4_1:84636391-84636410 | Msa0579770:CDS | 40.0% | |
| ! | CTCATCTGCTTATCCCTTTT+TGG | + | chr4_1:84636624-84636643 | Msa0579770:intron | 40.0% |
| AACCTATGGCATTACACATG+TGG | - | chr4_1:84636692-84636711 | None:intergenic | 40.0% | |
| TAGAATGTGTGTAGGGTTAG+AGG | + | chr4_1:84636754-84636773 | Msa0579770:intron | 40.0% | |
| AGAGGAGCCATATCCATAAA+TGG | + | chr4_1:84636934-84636953 | Msa0579770:intron | 40.0% | |
| GGAGGATCCAAATCCATTTA+TGG | - | chr4_1:84636950-84636969 | None:intergenic | 40.0% | |
| TTGCTCACTTTACACTTTGG+AGG | - | chr4_1:84636968-84636987 | None:intergenic | 40.0% | |
| TCAGAGCTATGTGACAATTG+GGG | + | chr4_1:84637182-84637201 | Msa0579770:intron | 40.0% | |
| AGTAACAGCCAAAATGGTTG+TGG | - | chr4_1:84637355-84637374 | None:intergenic | 40.0% | |
| !!! | ACAACCATTTTGGCTGTTAC+TGG | + | chr4_1:84637354-84637373 | Msa0579770:intron | 40.0% |
| ! | CTCTGGAGATGTTTCAGTAT+TGG | - | chr4_1:84637380-84637399 | None:intergenic | 40.0% |
| CAATACTGAAACATCTCCAG+AGG | + | chr4_1:84637378-84637397 | Msa0579770:intron | 40.0% | |
| TTCAAGGATTCGTATATCGG+GGG | - | chr4_1:84637445-84637464 | None:intergenic | 40.0% | |
| CTTCAAGGATTCGTATATCG+GGG | - | chr4_1:84637446-84637465 | None:intergenic | 40.0% | |
| GCATGTTGTGTTCAACTTCA+AGG | - | chr4_1:84637461-84637480 | None:intergenic | 40.0% | |
| TGAACACAACATGCTCAGAT+TGG | + | chr4_1:84637467-84637486 | Msa0579770:intron | 40.0% | |
| CTTCTGGTGAAAATTCCTGA+AGG | + | chr4_1:84637538-84637557 | Msa0579770:intron | 40.0% | |
| GGTCCCAATATAATCAAACG+AGG | - | chr4_1:84637588-84637607 | None:intergenic | 40.0% | |
| ! | ACCTCTTATTTGCTCTTCTC+AGG | + | chr4_1:84637605-84637624 | Msa0579770:intron | 40.0% |
| GAGAAACACTAGATGAAGCA+CGG | - | chr4_1:84637664-84637683 | None:intergenic | 40.0% | |
| AAGCTAGCTATGGTGGTTAT+TGG | - | chr4_1:84637761-84637780 | None:intergenic | 40.0% | |
| ! | ATAGCTAGCTTCATAACCTC+CGG | + | chr4_1:84637770-84637789 | Msa0579770:intron | 40.0% |
| ! | AAAAGTTATAGTGCTGCTGG+AGG | - | chr4_1:84637823-84637842 | None:intergenic | 40.0% |
| CCAAAAAGTTATAGTGCTGC+TGG | - | chr4_1:84637826-84637845 | None:intergenic | 40.0% | |
| ! | CCAGCAGCACTATAACTTTT+TGG | + | chr4_1:84637823-84637842 | Msa0579770:intron | 40.0% |
| !! | GCACTATAACTTTTTGGCCA+AGG | + | chr4_1:84637829-84637848 | Msa0579770:intron | 40.0% |
| AAAGGACCAAAGATTAGGGA+CGG | - | chr4_1:84637994-84638013 | None:intergenic | 40.0% | |
| GACCAAAGATTATGGACAGA+GGG | + | chr4_1:84638206-84638225 | Msa0579770:intron | 40.0% | |
| ACTCATGTTCATGATGTCCA+TGG | - | chr4_1:84638858-84638877 | None:intergenic | 40.0% | |
| TGACTAGGCTTTCTGTATCA+CGG | - | chr4_1:84638894-84638913 | None:intergenic | 40.0% | |
| TGATACAGAAAGCCTAGTCA+AGG | + | chr4_1:84638894-84638913 | Msa0579770:CDS | 40.0% | |
| CTAGATGTTGAGATCCTGTT+GGG | - | chr4_1:84639052-84639071 | None:intergenic | 40.0% | |
| ! | AGGATCTCAACATCTAGCTT+TGG | + | chr4_1:84639055-84639074 | Msa0579770:CDS | 40.0% |
| !! | ATCTCAACATCTAGCTTTGG+AGG | + | chr4_1:84639058-84639077 | Msa0579770:CDS | 40.0% |
| !! | GCTTTGGAGGATAAATCCAA+TGG | + | chr4_1:84639071-84639090 | Msa0579770:CDS | 40.0% |
| !!! | TGCTGGTCTTTTTGTTCCAT+TGG | - | chr4_1:84639090-84639109 | None:intergenic | 40.0% |
| GCGTGTGAAAAAGGTAAACT+CGG | + | chr4_1:84639145-84639164 | Msa0579770:intron | 40.0% | |
| TTCACATCAATCATGGCTCT+AGG | - | chr4_1:84639623-84639642 | None:intergenic | 40.0% | |
| CCAATGCTTCACATCAATCA+TGG | - | chr4_1:84639630-84639649 | None:intergenic | 40.0% | |
| CCATGATTGATGTGAAGCAT+TGG | + | chr4_1:84639627-84639646 | Msa0579770:CDS | 40.0% | |
| ACTTAGGTATCAACCATGAC+AGG | + | chr4_1:84639657-84639676 | Msa0579770:CDS | 40.0% | |
| ! | ATCAACACTCGTGATTTGGA+AGG | + | chr4_1:84639698-84639717 | Msa0579770:CDS | 40.0% |
| ! | TCAACACTCGTGATTTGGAA+GGG | + | chr4_1:84639699-84639718 | Msa0579770:CDS | 40.0% |
| CTCAGTGCAAACTTCACTAT+TGG | + | chr4_1:84639766-84639785 | Msa0579770:intron | 40.0% | |
| ACAAAAACTTCATCAGGCTC+TGG | - | chr4_1:84639894-84639913 | None:intergenic | 40.0% | |
| ATGATGGTTTGAGTGGTACA+CGG | - | chr4_1:84639958-84639977 | None:intergenic | 40.0% | |
| CGAGTTTATGATGGTTTGAG+TGG | - | chr4_1:84639965-84639984 | None:intergenic | 40.0% | |
| CAAACCATCATAAACTCGGT+TGG | + | chr4_1:84639967-84639986 | Msa0579770:intron | 40.0% | |
| GATTGACAGGGTTAAAGAGA+AGG | - | chr4_1:84640004-84640023 | None:intergenic | 40.0% | |
| GTTGAGGAACTTGACAACAT+AGG | - | chr4_1:84640133-84640152 | None:intergenic | 40.0% | |
| CTTCAAGAAAATACTCCCTC+TGG | - | chr4_1:84640326-84640345 | None:intergenic | 40.0% | |
| GTGCTTCAGAAAGACATTAG+GGG | - | chr4_1:84640410-84640429 | None:intergenic | 40.0% | |
| GGTGCTTCAGAAAGACATTA+GGG | - | chr4_1:84640411-84640430 | None:intergenic | 40.0% | |
| AATGTCTGTGCTATCATTGG+GGG | + | chr4_1:84640966-84640985 | Msa0579770:CDS | 40.0% | |
| !!! | TATCATTGGGGGTGTTTTCA+CGG | + | chr4_1:84640977-84640996 | Msa0579770:CDS | 40.0% |
| TGTTATGCAGAATCGAGTCA+AGG | - | chr4_1:84641122-84641141 | None:intergenic | 40.0% | |
| TACTACATAACTCCCAAGGA+CGG | - | chr4_1:84641239-84641258 | None:intergenic | 40.0% | |
| GGTGGCGAAGAAGAAAGTAA+CGG | - | chr4_1:84632401-84632420 | None:intergenic | 45.0% | |
| ! | TTTGCTAGCAGAAAGCATGG+TGG | - | chr4_1:84632419-84632438 | None:intergenic | 45.0% |
| !! | GAGTTTGCTAGCAGAAAGCA+TGG | - | chr4_1:84632422-84632441 | None:intergenic | 45.0% |
| ! | TCAAATGTGCGAGTTGGGAA+GGG | - | chr4_1:84632506-84632525 | None:intergenic | 45.0% |
| ! | TTCAAATGTGCGAGTTGGGA+AGG | - | chr4_1:84632507-84632526 | None:intergenic | 45.0% |
| GAGGTTCAAATGTGCGAGTT+GGG | - | chr4_1:84632511-84632530 | None:intergenic | 45.0% | |
| TGAGGTTCAAATGTGCGAGT+TGG | - | chr4_1:84632512-84632531 | None:intergenic | 45.0% | |
| CACATCCCCTATGGTTATGT+CGG | - | chr4_1:84632794-84632813 | None:intergenic | 45.0% | |
| AATCCCAAGAGATTTGACCG+AGG | + | chr4_1:84632940-84632959 | Msa0579770:CDS | 45.0% | |
| AGCGGGATTATCCATATTGG+CGG | + | chr4_1:84632976-84632995 | Msa0579770:CDS | 45.0% | |
| AACAATCACCGATGTAGAGG+TGG | - | chr4_1:84633168-84633187 | None:intergenic | 45.0% | |
| GTCAACAATCACCGATGTAG+AGG | - | chr4_1:84633171-84633190 | None:intergenic | 45.0% | |
| TACTCTTGTAGGAGGAAGAG+AGG | + | chr4_1:84633572-84633591 | Msa0579770:intron | 45.0% | |
| CGTTGTTGAAATTGGGAGTG+GGG | + | chr4_1:84633681-84633700 | Msa0579770:intron | 45.0% | |
| ACTCTCATGCGAGTTTGCAT+CGG | + | chr4_1:84634006-84634025 | Msa0579770:CDS | 45.0% | |
| ! | TCTCTTGTTCCCTGACGTTT+TGG | + | chr4_1:84634121-84634140 | Msa0579770:intron | 45.0% |
| GGGACTAATACCAAAACGTC+AGG | - | chr4_1:84634134-84634153 | None:intergenic | 45.0% | |
| GAGCCTGTTCTGTAAGTAAG+AGG | - | chr4_1:84634167-84634186 | None:intergenic | 45.0% | |
| GATTCAAAGTTAAGGCCCAC+TGG | + | chr4_1:84634220-84634239 | Msa0579770:CDS | 45.0% | |
| !! | TCAAAGTGCTGTGATGTGAG+TGG | - | chr4_1:84634328-84634347 | None:intergenic | 45.0% |
| TTTATGCACCATGGTGTTCC+TGG | + | chr4_1:84634518-84634537 | Msa0579770:CDS | 45.0% | |
| AATTACCAAACGTTGGCACC+AGG | - | chr4_1:84634539-84634558 | None:intergenic | 45.0% | |
| TAGACTTTGACACCGCTACA+AGG | - | chr4_1:84634709-84634728 | None:intergenic | 45.0% | |
| TCAGAAACCTTCATGGGAGA+AGG | + | chr4_1:84635003-84635022 | Msa0579770:intron | 45.0% | |
| AGAATACGCCCATCCATTTC+TGG | - | chr4_1:84635171-84635190 | None:intergenic | 45.0% | |
| ! | TGGGCGTATTCTTTTGGCAA+AGG | + | chr4_1:84635179-84635198 | Msa0579770:CDS | 45.0% |
| TCGAAAGGAATATGCGTGAG+TGG | + | chr4_1:84635497-84635516 | Msa0579770:intron | 45.0% | |
| CGAAAGGAATATGCGTGAGT+GGG | + | chr4_1:84635498-84635517 | Msa0579770:intron | 45.0% | |
| TGTCTTGCTCGTCACTCATT+AGG | + | chr4_1:84635628-84635647 | Msa0579770:intron | 45.0% | |
| TTGTCTGGAAGGACAAGACA+TGG | - | chr4_1:84635958-84635977 | None:intergenic | 45.0% | |
| CTCTTGTAAATAGGACCGGA+GGG | - | chr4_1:84636094-84636113 | None:intergenic | 45.0% | |
| TCTCTTGTAAATAGGACCGG+AGG | - | chr4_1:84636095-84636114 | None:intergenic | 45.0% | |
| ! | AAAGTGTCTGATACTCCCTC+CGG | - | chr4_1:84636209-84636228 | None:intergenic | 45.0% |
| ATGTCCAGGCATCACATACA+AGG | + | chr4_1:84636361-84636380 | Msa0579770:intron | 45.0% | |
| TGTCCAGGCATCACATACAA+GGG | + | chr4_1:84636362-84636381 | Msa0579770:intron | 45.0% | |
| ATACCCTTGTATGTGATGCC+TGG | - | chr4_1:84636368-84636387 | None:intergenic | 45.0% | |
| TTCGGAAAGGAAGTGATGTC+AGG | + | chr4_1:84636404-84636423 | Msa0579770:CDS | 45.0% | |
| TGCCACATGTGTAATGCCAT+AGG | + | chr4_1:84636687-84636706 | Msa0579770:intron | 45.0% | |
| ! | TGAGTTCACTTTAGAGGAGC+TGG | + | chr4_1:84637094-84637113 | Msa0579770:intron | 45.0% |
| ! | TGTCATCGCCACAACCATTT+TGG | + | chr4_1:84637344-84637363 | Msa0579770:intron | 45.0% |
| TTGGCCAGTAACAGCCAAAA+TGG | - | chr4_1:84637361-84637380 | None:intergenic | 45.0% | |
| GGTTCTCGTTGAAAATCCTC+TGG | - | chr4_1:84637397-84637416 | None:intergenic | 45.0% | |
| GCCTGAGAAGAGCAAATAAG+AGG | - | chr4_1:84637609-84637628 | None:intergenic | 45.0% | |
| ! | ATGCGTTTTTCTCTGCATCC+AGG | + | chr4_1:84637694-84637713 | Msa0579770:intron | 45.0% |
| GGTTATGAAGCTAGCTATGG+TGG | - | chr4_1:84637768-84637787 | None:intergenic | 45.0% | |
| GGAGGTTATGAAGCTAGCTA+TGG | - | chr4_1:84637771-84637790 | None:intergenic | 45.0% | |
| GTCACTATAGCAAAGACGTC+TGG | - | chr4_1:84637801-84637820 | None:intergenic | 45.0% | |
| TTCCGATTGTAGCAAGCAGA+AGG | + | chr4_1:84637890-84637909 | Msa0579770:intron | 45.0% | |
| TCCGATTGTAGCAAGCAGAA+GGG | + | chr4_1:84637891-84637910 | Msa0579770:intron | 45.0% | |
| GGACCAAAGATTATGGACAG+AGG | + | chr4_1:84638205-84638224 | Msa0579770:intron | 45.0% | |
| CTCCCTCTGTCCATAATCTT+TGG | - | chr4_1:84638211-84638230 | None:intergenic | 45.0% | |
| GATTCATGAGACGCTCAAAG+TGG | - | chr4_1:84638615-84638634 | None:intergenic | 45.0% | |
| AAATCCAGTCACCTCCAACA+TGG | - | chr4_1:84638772-84638791 | None:intergenic | 45.0% | |
| TCCTATTTCAGAAGCGACCA+TGG | + | chr4_1:84638838-84638857 | Msa0579770:CDS | 45.0% | |
| !! | TCCATGGTCGCTTCTGAAAT+AGG | - | chr4_1:84638842-84638861 | None:intergenic | 45.0% |
| TGTATCACGGTCTCCGTAAT+AGG | - | chr4_1:84638881-84638900 | None:intergenic | 45.0% | |
| AAGTCTCCATGGTCTGCAAA+CGG | - | chr4_1:84639016-84639035 | None:intergenic | 45.0% | |
| AGATGCCACTAAAGTCTCCA+TGG | - | chr4_1:84639027-84639046 | None:intergenic | 45.0% | |
| GCTAGATGTTGAGATCCTGT+TGG | - | chr4_1:84639053-84639072 | None:intergenic | 45.0% | |
| GGGATATGTGCGTGTGAAAA+AGG | + | chr4_1:84639136-84639155 | Msa0579770:CDS | 45.0% | |
| ! | TTTAGGACATTGCAGGTTCC+AGG | + | chr4_1:84639494-84639513 | Msa0579770:intron | 45.0% |
| ATCAACCATGACAGGCTGAA+TGG | + | chr4_1:84639665-84639684 | Msa0579770:CDS | 45.0% | |
| TCAACCATGACAGGCTGAAT+GGG | + | chr4_1:84639666-84639685 | Msa0579770:CDS | 45.0% | |
| TAAACTCGGTTGGGCCTTAA+TGG | + | chr4_1:84639977-84639996 | Msa0579770:intron | 45.0% | |
| GTGAAAGAGTGAAGCAGTTG+AGG | - | chr4_1:84640149-84640168 | None:intergenic | 45.0% | |
| GGGTGCTTCAGAAAGACATT+AGG | - | chr4_1:84640412-84640431 | None:intergenic | 45.0% | |
| CTTTCAGTAGGTTGTCTCCT+TGG | - | chr4_1:84640436-84640455 | None:intergenic | 45.0% | |
| GTGTGAACATTCCTGTTGCA+AGG | + | chr4_1:84640780-84640799 | Msa0579770:CDS | 45.0% | |
| TCAAGATGGAACCTTGCAAC+AGG | - | chr4_1:84640794-84640813 | None:intergenic | 45.0% | |
| TTCCATGTTCTGACCTGCAT+GGG | - | chr4_1:84640824-84640843 | None:intergenic | 45.0% | |
| AGGTCAGAACATGGAAGTCA+TGG | + | chr4_1:84640828-84640847 | Msa0579770:intron | 45.0% | |
| ACTACATAACTCCCAAGGAC+GGG | - | chr4_1:84641238-84641257 | None:intergenic | 45.0% | |
| !! | AAAAAAAAAAAAAAAAAAAG+AGG | - | chr4_1:84641044-84641063 | None:intergenic | 5.0% |
| GTGAGAGAGAGAGAGAGAGA+GGG | + | chr4_1:84632281-84632300 | Msa0579770:five_prime_UTR | 50.0% | |
| TGAGAGAGAGAGAGAGAGAG+GGG | + | chr4_1:84632282-84632301 | Msa0579770:five_prime_UTR | 50.0% | |
| GAGAGGGGGAAGAGAAGAAA+CGG | + | chr4_1:84632297-84632316 | Msa0579770:five_prime_UTR | 50.0% | |
| GCTACAGCTGAAGGAAGAAG+AGG | + | chr4_1:84632332-84632351 | Msa0579770:five_prime_UTR | 50.0% | |
| GAAGAGGTAGCTACTTGCGT+TGG | + | chr4_1:84632348-84632367 | Msa0579770:five_prime_UTR | 50.0% | |
| ACGCCTCGGTCAAATCTCTT+GGG | - | chr4_1:84632946-84632965 | None:intergenic | 50.0% | |
| GGGAGCGGGATTATCCATAT+TGG | + | chr4_1:84632973-84632992 | Msa0579770:CDS | 50.0% | |
| TGCGGTTACCACCTCTACAT+CGG | + | chr4_1:84633157-84633176 | Msa0579770:CDS | 50.0% | |
| TGTTGAAATTGGGAGTGGGG+TGG | + | chr4_1:84633684-84633703 | Msa0579770:intron | 50.0% | |
| GTTGAAATTGGGAGTGGGGT+GGG | + | chr4_1:84633685-84633704 | Msa0579770:intron | 50.0% | |
| TTGAAATTGGGAGTGGGGTG+GGG | + | chr4_1:84633686-84633705 | Msa0579770:intron | 50.0% | |
| ATGACGGCCAAACATTGCCA+AGG | + | chr4_1:84633790-84633809 | Msa0579770:intron | 50.0% | |
| ! | GGCATAGCCTTGGCAATGTT+TGG | - | chr4_1:84633800-84633819 | None:intergenic | 50.0% |
| GTTGATGTGAGTGACGTGCT+GGG | + | chr4_1:84634028-84634047 | Msa0579770:CDS | 50.0% | |
| GAATGAAACTCGGAGCCAGT+GGG | - | chr4_1:84634238-84634257 | None:intergenic | 50.0% | |
| !! | CACTGGCTCCGAGTTTCATT+CGG | + | chr4_1:84634237-84634256 | Msa0579770:CDS | 50.0% |
| ! | ACTGGCTCCGAGTTTCATTC+GGG | + | chr4_1:84634238-84634257 | Msa0579770:CDS | 50.0% |
| GAAACCTTCATGGGAGAAGG+CGG | + | chr4_1:84635006-84635025 | Msa0579770:intron | 50.0% | |
| ! | TCTGCTGCACTGGCCAAATA+TGG | - | chr4_1:84635530-84635549 | None:intergenic | 50.0% |
| GACACATCATTCTGCTGCAC+TGG | - | chr4_1:84635540-84635559 | None:intergenic | 50.0% | |
| TGGAAAATAGCAAGCGTGCG+TGG | - | chr4_1:84636309-84636328 | None:intergenic | 50.0% | |
| TTCCGGAAGACTTCTCTCGT+GGG | - | chr4_1:84637237-84637256 | None:intergenic | 50.0% | |
| TTTCCGGAAGACTTCTCTCG+TGG | - | chr4_1:84637238-84637257 | None:intergenic | 50.0% | |
| AAGATGCTGCTCCTGATGGT+GGG | - | chr4_1:84637419-84637438 | None:intergenic | 50.0% | |
| GATCAAGATGCTGCTCCTGA+TGG | - | chr4_1:84637423-84637442 | None:intergenic | 50.0% | |
| CACTAGATGAAGCACGGTGA+AGG | - | chr4_1:84637658-84637677 | None:intergenic | 50.0% | |
| ACCAGCCCTGTCTTCTTCAA+TGG | + | chr4_1:84637726-84637745 | Msa0579770:intron | 50.0% | |
| TCCATTGAAGAAGACAGGGC+TGG | - | chr4_1:84637730-84637749 | None:intergenic | 50.0% | |
| AAACAACAGGGCTGTAGCCT+TGG | - | chr4_1:84637849-84637868 | None:intergenic | 50.0% | |
| ! | CCCCTTCTGCTTGCTACAAT+CGG | - | chr4_1:84637895-84637914 | None:intergenic | 50.0% |
| CCGATTGTAGCAAGCAGAAG+GGG | + | chr4_1:84637892-84637911 | Msa0579770:intron | 50.0% | |
| GACCAAAGATTAGGGACGGA+GGG | - | chr4_1:84637990-84638009 | None:intergenic | 50.0% | |
| TCCTGAATTCTGCGCCATGT+TGG | + | chr4_1:84638755-84638774 | Msa0579770:intron | 50.0% | |
| TCCAACATGGCGCAGAATTC+AGG | - | chr4_1:84638759-84638778 | None:intergenic | 50.0% | |
| TGAATTCTGCGCCATGTTGG+AGG | + | chr4_1:84638758-84638777 | Msa0579770:intron | 50.0% | |
| ACTTCTCCGTTTGCAGACCA+TGG | + | chr4_1:84639007-84639026 | Msa0579770:intron | 50.0% | |
| GCAGACCATGGAGACTTTAG+TGG | + | chr4_1:84639019-84639038 | Msa0579770:intron | 50.0% | |
| TTAGTGGCATCTCTCCCAAC+AGG | + | chr4_1:84639035-84639054 | Msa0579770:CDS | 50.0% | |
| AAAAGACCAGCACCGTCAAC+CGG | + | chr4_1:84639098-84639117 | Msa0579770:CDS | 50.0% | |
| ! | ACTCTACATCCACCGGTTGA+CGG | - | chr4_1:84639113-84639132 | None:intergenic | 50.0% |
| AACCGGTGGATGTAGAGTTG+AGG | + | chr4_1:84639115-84639134 | Msa0579770:CDS | 50.0% | |
| ACCGGTGGATGTAGAGTTGA+GGG | + | chr4_1:84639116-84639135 | Msa0579770:CDS | 50.0% | |
| TCCCTCAACTCTACATCCAC+CGG | - | chr4_1:84639120-84639139 | None:intergenic | 50.0% | |
| ATTGCAGGTTCCAGGAAGCT+TGG | + | chr4_1:84639502-84639521 | Msa0579770:intron | 50.0% | |
| GGTTTGAGTGGTACACGGTA+AGG | - | chr4_1:84639953-84639972 | None:intergenic | 50.0% | |
| AGGCCCAACCGAGTTTATGA+TGG | - | chr4_1:84639974-84639993 | None:intergenic | 50.0% | |
| !! | TCTTTCTGAAGCACCCACCA+AGG | + | chr4_1:84640416-84640435 | Msa0579770:intron | 50.0% |
| CAGTAGGTTGTCTCCTTGGT+GGG | - | chr4_1:84640432-84640451 | None:intergenic | 50.0% | |
| TCAGTAGGTTGTCTCCTTGG+TGG | - | chr4_1:84640433-84640452 | None:intergenic | 50.0% | |
| TCCATGTTCTGACCTGCATG+GGG | - | chr4_1:84640823-84640842 | None:intergenic | 50.0% | |
| CTTCCATGTTCTGACCTGCA+TGG | - | chr4_1:84640825-84640844 | None:intergenic | 50.0% | |
| CGTGAGAGAGAGAGAGAGAG+AGG | + | chr4_1:84632280-84632299 | Msa0579770:five_prime_UTR | 55.0% | |
| GAGAGAGAGAGAGAGAGAGG+GGG | + | chr4_1:84632283-84632302 | Msa0579770:five_prime_UTR | 55.0% | |
| GACGCCTCGGTCAAATCTCT+TGG | - | chr4_1:84632947-84632966 | None:intergenic | 55.0% | |
| !! | TTTGACCGAGGCGTCGTTGT+CGG | + | chr4_1:84632952-84632971 | Msa0579770:CDS | 55.0% |
| ! | GCAAACTCGCATGAGAGTGC+AGG | - | chr4_1:84634004-84634023 | None:intergenic | 55.0% |
| ! | GGTTGATGTGAGTGACGTGC+TGG | + | chr4_1:84634027-84634046 | Msa0579770:CDS | 55.0% |
| CGAATGAAACTCGGAGCCAG+TGG | - | chr4_1:84634239-84634258 | None:intergenic | 55.0% | |
| ! | GTGTTCCTGGTGCCAACGTT+TGG | + | chr4_1:84634531-84634550 | Msa0579770:CDS | 55.0% |
| TTAGCCGCCTTCTCCCATGA+AGG | - | chr4_1:84635013-84635032 | None:intergenic | 55.0% | |
| CTCCCACGAGAGAAGTCTTC+CGG | + | chr4_1:84637232-84637251 | Msa0579770:intron | 55.0% | |
| GTTGTGGCGATGACAGTGAC+TGG | - | chr4_1:84637339-84637358 | None:intergenic | 55.0% | |
| TCAACGAGAACCCCACCATC+AGG | + | chr4_1:84637405-84637424 | Msa0579770:intron | 55.0% | |
| ! | AGATGCTGCTCCTGATGGTG+GGG | - | chr4_1:84637418-84637437 | None:intergenic | 55.0% |
| CAAGATGCTGCTCCTGATGG+TGG | - | chr4_1:84637420-84637439 | None:intergenic | 55.0% | |
| !! | AGGGCTGGTTGAATCACACC+TGG | - | chr4_1:84637715-84637734 | None:intergenic | 55.0% |
| GCAAAGACGTCTGGACTCAC+CGG | - | chr4_1:84637792-84637811 | None:intergenic | 55.0% | |
| CTCCCTCCGTCCCTAATCTT+TGG | + | chr4_1:84637985-84638004 | Msa0579770:intron | 55.0% | |
| GGACCAAAGATTAGGGACGG+AGG | - | chr4_1:84637991-84638010 | None:intergenic | 55.0% | |
| GGTCTGCAAACGGAGAAGTC+AGG | - | chr4_1:84639006-84639025 | None:intergenic | 55.0% | |
| GCTGAGACAACCAAGCTTCC+TGG | - | chr4_1:84639515-84639534 | None:intergenic | 55.0% | |
| ACCATGACAGGCTGAATGGG+CGG | + | chr4_1:84639669-84639688 | Msa0579770:CDS | 55.0% | |
| GTACACAGCACACAGCAGTG+TGG | + | chr4_1:84640751-84640770 | Msa0579770:CDS | 55.0% | |
| CCATGTTCTGACCTGCATGG+GGG | - | chr4_1:84640822-84640841 | None:intergenic | 55.0% | |
| !! | TTGACCGAGGCGTCGTTGTC+GGG | + | chr4_1:84632953-84632972 | Msa0579770:CDS | 60.0% |
| CATGGCGAGAGCCGCCAATA+TGG | - | chr4_1:84632990-84633009 | None:intergenic | 60.0% | |
| CGTTGGCACCAGGAACACCA+TGG | - | chr4_1:84634529-84634548 | None:intergenic | 60.0% | |
| GGGTTCATTGAAGCCGCTGC+CGG | + | chr4_1:84637202-84637221 | Msa0579770:intron | 60.0% | |
| ! | GGTGAAGGCATGCAGCAGGA+CGG | - | chr4_1:84637643-84637662 | None:intergenic | 60.0% |
| AAGACGTCTGGACTCACCGG+AGG | - | chr4_1:84637789-84637808 | None:intergenic | 60.0% | |
| TGCGCCATGTTGGAGGTGAC+TGG | + | chr4_1:84638765-84638784 | Msa0579770:intron | 60.0% | |
| ACCGCCCATTCAGCCTGTCA+TGG | - | chr4_1:84639673-84639692 | None:intergenic | 60.0% | |
| GCATGGGGGAGAGCTCAAGA+TGG | - | chr4_1:84640808-84640827 | None:intergenic | 60.0% | |
| TCTTGAGCTCTCCCCCATGC+AGG | + | chr4_1:84640808-84640827 | Msa0579770:CDS | 60.0% | |
| CCCCCATGCAGGTCAGAACA+TGG | + | chr4_1:84640819-84640838 | Msa0579770:intron | 60.0% | |
| ! | GCACGGTGAAGGCATGCAGC+AGG | - | chr4_1:84637647-84637666 | None:intergenic | 65.0% |
| AGACCAGCACCGTCAACCGG+TGG | + | chr4_1:84639101-84639120 | Msa0579770:CDS | 65.0% | |
| ! | CATCCACCGGTTGACGGTGC+TGG | - | chr4_1:84639107-84639126 | None:intergenic | 65.0% |
| CGCTCCCGACAACGACGCCT+CGG | - | chr4_1:84632960-84632979 | None:intergenic | 70.0% | |
| !! | CGAGGCGTCGTTGTCGGGAG+CGG | + | chr4_1:84632958-84632977 | Msa0579770:CDS | 70.0% |
| !! | GAGGCGTCGTTGTCGGGAGC+GGG | + | chr4_1:84632959-84632978 | Msa0579770:CDS | 70.0% |
| CTCTCGTGGGAGCTCGCAGC+CGG | - | chr4_1:84637224-84637243 | None:intergenic | 70.0% | |
| TGGGAGCTCGCAGCCGGCAG+CGG | - | chr4_1:84637218-84637237 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 84632224 | 84641423 | 84632224 | ID=Msa0579770;Name=Msa0579770 |
| chr4_1 | mRNA | 84632224 | 84641423 | 84632224 | ID=Msa0579770-mRNA-1;Parent=Msa0579770;Name=Msa0579770-mRNA-1;_AED=0.21;_eAED=0.21;_QI=197|0.86|0.87|1|0.86|0.87|16|238|496 |
| chr4_1 | exon | 84632224 | 84632461 | 84632224 | ID=Msa0579770-mRNA-1:exon:31007;Parent=Msa0579770-mRNA-1 |
| chr4_1 | exon | 84632937 | 84633027 | 84632937 | ID=Msa0579770-mRNA-1:exon:31008;Parent=Msa0579770-mRNA-1 |
| chr4_1 | exon | 84633140 | 84633234 | 84633140 | ID=Msa0579770-mRNA-1:exon:31009;Parent=Msa0579770-mRNA-1 |
| chr4_1 | exon | 84633997 | 84634054 | 84633997 | ID=Msa0579770-mRNA-1:exon:31010;Parent=Msa0579770-mRNA-1 |
| chr4_1 | exon | 84634178 | 84634362 | 84634178 | ID=Msa0579770-mRNA-1:exon:31011;Parent=Msa0579770-mRNA-1 |
| chr4_1 | exon | 84634495 | 84634552 | 84634495 | ID=Msa0579770-mRNA-1:exon:31012;Parent=Msa0579770-mRNA-1 |
| chr4_1 | exon | 84635007 | 84635047 | 84635007 | ID=Msa0579770-mRNA-1:exon:31013;Parent=Msa0579770-mRNA-1 |
| chr4_1 | exon | 84635161 | 84635235 | 84635161 | ID=Msa0579770-mRNA-1:exon:31014;Parent=Msa0579770-mRNA-1 |
| chr4_1 | exon | 84636369 | 84636425 | 84636369 | ID=Msa0579770-mRNA-1:exon:31015;Parent=Msa0579770-mRNA-1 |
| chr4_1 | exon | 84638523 | 84638553 | 84638523 | ID=Msa0579770-mRNA-1:exon:31016;Parent=Msa0579770-mRNA-1 |
| chr4_1 | exon | 84638823 | 84638915 | 84638823 | ID=Msa0579770-mRNA-1:exon:31017;Parent=Msa0579770-mRNA-1 |
| chr4_1 | exon | 84639023 | 84639157 | 84639023 | ID=Msa0579770-mRNA-1:exon:31018;Parent=Msa0579770-mRNA-1 |
| chr4_1 | exon | 84639509 | 84639730 | 84639509 | ID=Msa0579770-mRNA-1:exon:31019;Parent=Msa0579770-mRNA-1 |
| chr4_1 | exon | 84640677 | 84640829 | 84640677 | ID=Msa0579770-mRNA-1:exon:31020;Parent=Msa0579770-mRNA-1 |
| chr4_1 | exon | 84640921 | 84640998 | 84640921 | ID=Msa0579770-mRNA-1:exon:31021;Parent=Msa0579770-mRNA-1 |
| chr4_1 | exon | 84641108 | 84641423 | 84641108 | ID=Msa0579770-mRNA-1:exon:31022;Parent=Msa0579770-mRNA-1 |
| chr4_1 | five_prime_UTR | 84632224 | 84632420 | 84632224 | ID=Msa0579770-mRNA-1:five_prime_utr;Parent=Msa0579770-mRNA-1 |
| chr4_1 | CDS | 84632421 | 84632461 | 84632421 | ID=Msa0579770-mRNA-1:cds;Parent=Msa0579770-mRNA-1 |
| chr4_1 | CDS | 84632937 | 84633027 | 84632937 | ID=Msa0579770-mRNA-1:cds;Parent=Msa0579770-mRNA-1 |
| chr4_1 | CDS | 84633140 | 84633234 | 84633140 | ID=Msa0579770-mRNA-1:cds;Parent=Msa0579770-mRNA-1 |
| chr4_1 | CDS | 84633997 | 84634054 | 84633997 | ID=Msa0579770-mRNA-1:cds;Parent=Msa0579770-mRNA-1 |
| chr4_1 | CDS | 84634178 | 84634362 | 84634178 | ID=Msa0579770-mRNA-1:cds;Parent=Msa0579770-mRNA-1 |
| chr4_1 | CDS | 84634495 | 84634552 | 84634495 | ID=Msa0579770-mRNA-1:cds;Parent=Msa0579770-mRNA-1 |
| chr4_1 | CDS | 84635007 | 84635047 | 84635007 | ID=Msa0579770-mRNA-1:cds;Parent=Msa0579770-mRNA-1 |
| chr4_1 | CDS | 84635161 | 84635235 | 84635161 | ID=Msa0579770-mRNA-1:cds;Parent=Msa0579770-mRNA-1 |
| chr4_1 | CDS | 84636369 | 84636425 | 84636369 | ID=Msa0579770-mRNA-1:cds;Parent=Msa0579770-mRNA-1 |
| chr4_1 | CDS | 84638523 | 84638553 | 84638523 | ID=Msa0579770-mRNA-1:cds;Parent=Msa0579770-mRNA-1 |
| chr4_1 | CDS | 84638823 | 84638915 | 84638823 | ID=Msa0579770-mRNA-1:cds;Parent=Msa0579770-mRNA-1 |
| chr4_1 | CDS | 84639023 | 84639157 | 84639023 | ID=Msa0579770-mRNA-1:cds;Parent=Msa0579770-mRNA-1 |
| chr4_1 | CDS | 84639509 | 84639730 | 84639509 | ID=Msa0579770-mRNA-1:cds;Parent=Msa0579770-mRNA-1 |
| chr4_1 | CDS | 84640677 | 84640829 | 84640677 | ID=Msa0579770-mRNA-1:cds;Parent=Msa0579770-mRNA-1 |
| chr4_1 | CDS | 84640921 | 84640998 | 84640921 | ID=Msa0579770-mRNA-1:cds;Parent=Msa0579770-mRNA-1 |
| chr4_1 | CDS | 84641108 | 84641185 | 84641108 | ID=Msa0579770-mRNA-1:cds;Parent=Msa0579770-mRNA-1 |
| chr4_1 | three_prime_UTR | 84641186 | 84641423 | 84641186 | ID=Msa0579770-mRNA-1:three_prime_utr;Parent=Msa0579770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
