Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1195300 | XP_003627147.3 | 99.554 | 673 | 3 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1381 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1195300 | sp|Q9C6I8|NOG1_ARATH | 77.286 | 678 | 142 | 5 | 1 | 673 | 1 | 671 | 0.0 | 1073 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1195300 | A0A396GF36 | 99.554 | 673 | 3 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1381 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0007850 | Msa1195300 | 0.854307 | 1.342757e-61 | -8.615850e-47 |
Msa0016540 | Msa1195300 | 0.807914 | 4.004947e-50 | -8.615850e-47 |
Msa0022970 | Msa1195300 | 0.836130 | 1.120939e-56 | -8.615850e-47 |
Msa0029630 | Msa1195300 | 0.803323 | 3.682202e-49 | -8.615850e-47 |
Msa0032810 | Msa1195300 | 0.871990 | 4.483525e-67 | -8.615850e-47 |
Msa0045730 | Msa1195300 | 0.843960 | 1.016157e-58 | -8.615850e-47 |
Msa0047160 | Msa1195300 | 0.848909 | 4.539030e-60 | -8.615850e-47 |
Msa0048180 | Msa1195300 | 0.829199 | 5.884147e-55 | -8.615850e-47 |
Msa0056270 | Msa1195300 | 0.838277 | 3.164274e-57 | -8.615850e-47 |
Msa0094470 | Msa1195300 | 0.831062 | 2.064861e-55 | -8.615850e-47 |
Msa0116130 | Msa1195300 | 0.877228 | 7.434626e-69 | -8.615850e-47 |
Msa0116670 | Msa1195300 | 0.829946 | 3.873269e-55 | -8.615850e-47 |
Msa0118710 | Msa1195300 | 0.857186 | 1.937018e-62 | -8.615850e-47 |
Msa0609000 | Msa1195300 | 0.811836 | 5.736391e-51 | -8.615850e-47 |
Msa0615580 | Msa1195300 | 0.877438 | 6.281683e-69 | -8.615850e-47 |
Msa0617540 | Msa1195300 | 0.801653 | 8.134374e-49 | -8.615850e-47 |
Msa0618930 | Msa1195300 | 0.835907 | 1.276688e-56 | -8.615850e-47 |
Msa0619860 | Msa1195300 | 0.830903 | 2.259594e-55 | -8.615850e-47 |
Msa0623200 | Msa1195300 | 0.852005 | 6.130121e-61 | -8.615850e-47 |
Msa0631250 | Msa1195300 | 0.818781 | 1.639035e-52 | -8.615850e-47 |
Msa0633570 | Msa1195300 | 0.816350 | 5.787210e-52 | -8.615850e-47 |
Msa0634890 | Msa1195300 | 0.802778 | 4.773897e-49 | -8.615850e-47 |
Msa0639490 | Msa1195300 | 0.817011 | 4.114581e-52 | -8.615850e-47 |
Msa0654870 | Msa1195300 | 0.802658 | 5.053160e-49 | -8.615850e-47 |
Msa0656410 | Msa1195300 | 0.829451 | 5.110564e-55 | -8.615850e-47 |
Msa0656810 | Msa1195300 | 0.803593 | 3.237763e-49 | -8.615850e-47 |
Msa0666230 | Msa1195300 | 0.869982 | 2.057243e-66 | -8.615850e-47 |
Msa0684160 | Msa1195300 | 0.808895 | 2.473033e-50 | -8.615850e-47 |
Msa0694990 | Msa1195300 | 0.836656 | 8.234763e-57 | -8.615850e-47 |
Msa0698780 | Msa1195300 | 0.802882 | 4.542395e-49 | -8.615850e-47 |
Msa0699190 | Msa1195300 | 0.858035 | 1.085549e-62 | -8.615850e-47 |
Msa0706500 | Msa1195300 | 0.804423 | 2.176073e-49 | -8.615850e-47 |
Msa0719420 | Msa1195300 | 0.822379 | 2.444696e-53 | -8.615850e-47 |
Msa0729200 | Msa1195300 | 0.839473 | 1.551343e-57 | -8.615850e-47 |
Msa0751010 | Msa1195300 | 0.809042 | 2.300202e-50 | -8.615850e-47 |
Msa0766080 | Msa1195300 | 0.824385 | 8.306145e-54 | -8.615850e-47 |
Msa0769590 | Msa1195300 | 0.845952 | 2.945609e-59 | -8.615850e-47 |
Msa0785130 | Msa1195300 | 0.849196 | 3.775411e-60 | -8.615850e-47 |
Msa0789680 | Msa1195300 | 0.819859 | 9.308970e-53 | -8.615850e-47 |
Msa0790400 | Msa1195300 | 0.802921 | 4.458805e-49 | -8.615850e-47 |
Msa0794050 | Msa1195300 | 0.816147 | 6.424005e-52 | -8.615850e-47 |
Msa0806880 | Msa1195300 | 0.856569 | 2.943850e-62 | -8.615850e-47 |
Msa0817540 | Msa1195300 | 0.822501 | 2.290343e-53 | -8.615850e-47 |
Msa0822570 | Msa1195300 | 0.814842 | 1.253875e-51 | -8.615850e-47 |
Msa0825270 | Msa1195300 | 0.806763 | 7.024682e-50 | -8.615850e-47 |
Msa0125450 | Msa1195300 | 0.806843 | 6.754492e-50 | -8.615850e-47 |
Msa0126840 | Msa1195300 | 0.831240 | 1.867014e-55 | -8.615850e-47 |
Msa0133540 | Msa1195300 | 0.831919 | 1.270271e-55 | -8.615850e-47 |
Msa0138890 | Msa1195300 | 0.811885 | 5.596851e-51 | -8.615850e-47 |
Msa0142110 | Msa1195300 | 0.816730 | 4.756379e-52 | -8.615850e-47 |
Msa0163760 | Msa1195300 | 0.803316 | 3.695494e-49 | -8.615850e-47 |
Msa0167480 | Msa1195300 | 0.850858 | 1.294063e-60 | -8.615850e-47 |
Msa0171940 | Msa1195300 | 0.816185 | 6.300316e-52 | -8.615850e-47 |
Msa0173530 | Msa1195300 | 0.829621 | 4.647276e-55 | -8.615850e-47 |
Msa0177960 | Msa1195300 | 0.848706 | 5.164592e-60 | -8.615850e-47 |
Msa0180020 | Msa1195300 | 0.822274 | 2.586384e-53 | -8.615850e-47 |
Msa0181490 | Msa1195300 | 0.827907 | 1.207322e-54 | -8.615850e-47 |
Msa0188690 | Msa1195300 | 0.806570 | 7.714645e-50 | -8.615850e-47 |
Msa0218720 | Msa1195300 | 0.827990 | 1.152982e-54 | -8.615850e-47 |
Msa0218830 | Msa1195300 | 0.847365 | 1.210928e-59 | -8.615850e-47 |
Msa0219120 | Msa1195300 | 0.807992 | 3.854638e-50 | -8.615850e-47 |
Msa0221030 | Msa1195300 | 0.836223 | 1.061467e-56 | -8.615850e-47 |
Msa0230490 | Msa1195300 | 0.830609 | 2.666492e-55 | -8.615850e-47 |
Msa0230520 | Msa1195300 | 0.856979 | 2.229339e-62 | -8.615850e-47 |
Msa0231100 | Msa1195300 | 0.851967 | 6.283453e-61 | -8.615850e-47 |
Msa0231660 | Msa1195300 | 0.807734 | 4.373720e-50 | -8.615850e-47 |
Msa0236620 | Msa1195300 | 0.818633 | 1.770835e-52 | -8.615850e-47 |
Msa0423750 | Msa1195300 | 0.834607 | 2.718304e-56 | -8.615850e-47 |
Msa0437020 | Msa1195300 | 0.864523 | 1.144006e-64 | -8.615850e-47 |
Msa0443390 | Msa1195300 | 0.882830 | 7.493357e-71 | -8.615850e-47 |
Msa0992550 | Msa1195300 | 0.853336 | 2.555764e-61 | -8.615850e-47 |
Msa1017510 | Msa1195300 | 0.806058 | 9.891880e-50 | -8.615850e-47 |
Msa1019240 | Msa1195300 | 0.860168 | 2.493570e-63 | -8.615850e-47 |
Msa1019260 | Msa1195300 | 0.850013 | 2.234691e-60 | -8.615850e-47 |
Msa1070390 | Msa1195300 | 0.830216 | 3.326713e-55 | -8.615850e-47 |
Msa1072710 | Msa1195300 | 0.840955 | 6.367348e-58 | -8.615850e-47 |
Msa1094380 | Msa1195300 | 0.826724 | 2.318577e-54 | -8.615850e-47 |
Msa1104140 | Msa1195300 | 0.810103 | 1.361391e-50 | -8.615850e-47 |
Msa1104210 | Msa1195300 | 0.855230 | 7.250401e-62 | -8.615850e-47 |
Msa0241830 | Msa1195300 | 0.825685 | 4.096798e-54 | -8.615850e-47 |
Msa0244980 | Msa1195300 | 0.815735 | 7.938067e-52 | -8.615850e-47 |
Msa0245430 | Msa1195300 | 0.817477 | 3.231588e-52 | -8.615850e-47 |
Msa0245580 | Msa1195300 | 0.873632 | 1.264646e-67 | -8.615850e-47 |
Msa0262480 | Msa1195300 | 0.861076 | 1.322901e-63 | -8.615850e-47 |
Msa0270210 | Msa1195300 | 0.832742 | 7.948149e-56 | -8.615850e-47 |
Msa0275360 | Msa1195300 | 0.820817 | 5.612286e-53 | -8.615850e-47 |
Msa0281530 | Msa1195300 | 0.800867 | 1.178077e-48 | -8.615850e-47 |
Msa0284180 | Msa1195300 | 0.801240 | 9.884691e-49 | -8.615850e-47 |
Msa0295250 | Msa1195300 | 0.828371 | 9.329600e-55 | -8.615850e-47 |
Msa0296250 | Msa1195300 | 0.869898 | 2.192076e-66 | -8.615850e-47 |
Msa0300350 | Msa1195300 | 0.858243 | 9.416422e-63 | -8.615850e-47 |
Msa0305780 | Msa1195300 | 0.802542 | 5.339050e-49 | -8.615850e-47 |
Msa0306690 | Msa1195300 | 0.848842 | 4.734849e-60 | -8.615850e-47 |
Msa0307850 | Msa1195300 | 0.811576 | 6.532483e-51 | -8.615850e-47 |
Msa0327300 | Msa1195300 | 0.801343 | 9.415038e-49 | -8.615850e-47 |
Msa0332640 | Msa1195300 | 0.840902 | 6.574144e-58 | -8.615850e-47 |
Msa0333190 | Msa1195300 | 0.873668 | 1.230502e-67 | -8.615850e-47 |
Msa0348830 | Msa1195300 | 0.875974 | 2.018149e-68 | -8.615850e-47 |
Msa1123770 | Msa1195300 | 0.830805 | 2.388464e-55 | -8.615850e-47 |
Msa1123830 | Msa1195300 | 0.806076 | 9.802955e-50 | -8.615850e-47 |
Msa1126830 | Msa1195300 | 0.846995 | 1.529872e-59 | -8.615850e-47 |
Msa1126850 | Msa1195300 | 0.809852 | 1.541943e-50 | -8.615850e-47 |
Msa1127590 | Msa1195300 | 0.808886 | 2.484224e-50 | -8.615850e-47 |
Msa1131560 | Msa1195300 | 0.840467 | 8.544109e-58 | -8.615850e-47 |
Msa1158230 | Msa1195300 | 0.804031 | 2.625535e-49 | -8.615850e-47 |
Msa1165780 | Msa1195300 | 0.879825 | 9.079993e-70 | -8.615850e-47 |
Msa1166870 | Msa1195300 | 0.861320 | 1.114740e-63 | -8.615850e-47 |
Msa1169910 | Msa1195300 | 0.818959 | 1.492634e-52 | -8.615850e-47 |
Msa1175350 | Msa1195300 | 0.827204 | 1.780297e-54 | -8.615850e-47 |
Msa1177250 | Msa1195300 | 0.813128 | 2.993834e-51 | -8.615850e-47 |
Msa1179950 | Msa1195300 | 0.834419 | 3.029524e-56 | -8.615850e-47 |
Msa1179980 | Msa1195300 | 0.853005 | 3.179305e-61 | -8.615850e-47 |
Msa1195300 | Msa1202580 | 0.816858 | 4.453332e-52 | -8.615850e-47 |
Msa1195300 | Msa1208020 | 0.842014 | 3.348665e-58 | -8.615850e-47 |
Msa1195300 | Msa1209200 | 0.826654 | 2.409826e-54 | -8.615850e-47 |
Msa1195300 | Msa1211770 | 0.806050 | 9.929382e-50 | -8.615850e-47 |
Msa1195300 | Msa1217580 | 0.808823 | 2.562406e-50 | -8.615850e-47 |
Msa1195300 | Msa1234830 | 0.849856 | 2.471174e-60 | -8.615850e-47 |
Msa1195300 | Msa1235610 | 0.805933 | 1.050891e-49 | -8.615850e-47 |
Msa1195300 | Msa1241190 | 0.810860 | 9.343699e-51 | -8.615850e-47 |
Msa1195300 | Msa1262890 | 0.837531 | 4.919361e-57 | -8.615850e-47 |
Msa1195300 | Msa1264210 | 0.811816 | 5.794627e-51 | -8.615850e-47 |
Msa1195300 | Msa1265630 | 0.849430 | 3.249282e-60 | -8.615850e-47 |
Msa1195300 | Msa1270620 | 0.851201 | 1.035150e-60 | -8.615850e-47 |
Msa1195300 | Msa1270690 | 0.853123 | 2.941178e-61 | -8.615850e-47 |
Msa1195300 | Msa1275680 | 0.860064 | 2.679218e-63 | -8.615850e-47 |
Msa1195300 | Msa1302380 | 0.846171 | 2.567560e-59 | -8.615850e-47 |
Msa1195300 | Msa1306990 | 0.836643 | 8.295847e-57 | -8.615850e-47 |
Msa1195300 | Msa1315890 | 0.817433 | 3.306319e-52 | -8.615850e-47 |
Msa1195300 | Msa1331250 | 0.835326 | 1.791049e-56 | -8.615850e-47 |
Msa1195300 | Msa1331710 | 0.831108 | 2.012257e-55 | -8.615850e-47 |
Msa1195300 | Msa1332590 | 0.824113 | 9.622548e-54 | -8.615850e-47 |
Msa1195300 | Msa1343290 | 0.818505 | 1.893082e-52 | -8.615850e-47 |
Msa1195300 | Msa1349570 | 0.836021 | 1.194204e-56 | -8.615850e-47 |
Msa1195300 | Msa1351540 | 0.846588 | 1.976172e-59 | -8.615850e-47 |
Msa1195300 | Msa1363330 | 0.804837 | 1.783234e-49 | -8.615850e-47 |
Msa1195300 | Msa1369190 | 0.867209 | 1.619690e-65 | -8.615850e-47 |
Msa1195300 | Msa1385720 | 0.826172 | 3.138190e-54 | -8.615850e-47 |
Msa1195300 | Msa1386600 | 0.804982 | 1.663167e-49 | -8.615850e-47 |
Msa1195300 | Msa1403570 | 0.831716 | 1.425387e-55 | -8.615850e-47 |
Msa1195300 | Msa1409260 | 0.805643 | 1.208961e-49 | -8.615850e-47 |
Msa1195300 | Msa1413500 | 0.853081 | 3.025395e-61 | -8.615850e-47 |
Msa1195300 | Msa1420660 | 0.801297 | 9.624160e-49 | -8.615850e-47 |
Msa1195300 | Msa1426370 | 0.830196 | 3.364617e-55 | -8.615850e-47 |
Msa1195300 | Msa1426490 | 0.823496 | 1.342567e-53 | -8.615850e-47 |
Msa1195300 | Msa1434090 | 0.829590 | 4.726613e-55 | -8.615850e-47 |
Msa1195300 | Msa1443300 | 0.806221 | 9.138308e-50 | -8.615850e-47 |
Msa1195300 | Msa1450280 | 0.807445 | 5.036295e-50 | -8.615850e-47 |
Msa1195300 | Msa1454680 | 0.802574 | 5.259830e-49 | -8.615850e-47 |
Msa1195300 | Msa1459960 | 0.810732 | 9.957335e-51 | -8.615850e-47 |
Msa1195300 | Msa1462860 | 0.810865 | 9.320268e-51 | -8.615850e-47 |
Msa1195300 | Msa1465260 | 0.829856 | 4.072564e-55 | -8.615850e-47 |
Msa0520660 | Msa1195300 | 0.805665 | 1.196514e-49 | -8.615850e-47 |
Msa0526540 | Msa1195300 | 0.809918 | 1.492291e-50 | -8.615850e-47 |
Msa0527020 | Msa1195300 | 0.800096 | 1.691343e-48 | -8.615850e-47 |
Msa0534750 | Msa1195300 | 0.870295 | 1.625801e-66 | -8.615850e-47 |
Msa0550540 | Msa1195300 | 0.848693 | 5.210468e-60 | -8.615850e-47 |
Msa0550570 | Msa1195300 | 0.838204 | 3.303879e-57 | -8.615850e-47 |
Msa0579770 | Msa1195300 | 0.801992 | 6.930436e-49 | -8.615850e-47 |
Msa0581110 | Msa1195300 | 0.843530 | 1.324017e-58 | -8.615850e-47 |
Msa0581280 | Msa1195300 | 0.842588 | 2.359942e-58 | -8.615850e-47 |
Msa0593700 | Msa1195300 | 0.816099 | 6.584128e-52 | -8.615850e-47 |
Msa0858440 | Msa1195300 | 0.804700 | 1.904924e-49 | -8.615850e-47 |
Msa0867060 | Msa1195300 | 0.802960 | 4.376735e-49 | -8.615850e-47 |
Msa0876170 | Msa1195300 | 0.807330 | 5.329498e-50 | -8.615850e-47 |
Msa0888810 | Msa1195300 | 0.806288 | 8.847176e-50 | -8.615850e-47 |
Msa0892640 | Msa1195300 | 0.821145 | 4.718561e-53 | -8.615850e-47 |
Msa0913240 | Msa1195300 | 0.885236 | 9.677782e-72 | -8.615850e-47 |
Msa0943170 | Msa1195300 | 0.802540 | 5.345438e-49 | -8.615850e-47 |
Msa0944200 | Msa1195300 | 0.801304 | 9.589939e-49 | -8.615850e-47 |
Msa0958000 | Msa1195300 | 0.808332 | 3.262472e-50 | -8.615850e-47 |
Msa0960830 | Msa1195300 | 0.801516 | 8.679071e-49 | -8.615850e-47 |
Msa0963020 | Msa1195300 | 0.863893 | 1.798540e-64 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1195300 | MtrunA17_Chr8g0342681 | 99.554 | 673 | 3 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1381 |
Msa1195300 | MtrunA17_Chr2g0316271 | 99.257 | 673 | 5 | 0 | 1 | 673 | 1 | 673 | 0.0 | 1378 |
Msa1195300 | MtrunA17_Chr7g0233051 | 28.065 | 310 | 196 | 5 | 62 | 361 | 136 | 428 | 2.57e-30 | 124 |
Msa1195300 | MtrunA17_Chr2g0319171 | 62.500 | 112 | 36 | 3 | 566 | 673 | 39 | 148 | 7.82e-29 | 112 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1195300 | AT1G50920.1 | 77.286 | 678 | 142 | 5 | 1 | 673 | 1 | 671 | 0.0 | 1073 |
Msa1195300 | AT1G10300.3 | 70.631 | 681 | 169 | 7 | 1 | 673 | 30 | 687 | 0.0 | 931 |
Msa1195300 | AT1G10300.1 | 70.631 | 681 | 169 | 7 | 1 | 673 | 30 | 687 | 0.0 | 931 |
Msa1195300 | AT1G10300.2 | 70.631 | 681 | 169 | 7 | 1 | 673 | 1 | 658 | 0.0 | 929 |
Msa1195300 | AT1G80770.4 | 27.241 | 290 | 206 | 2 | 6 | 293 | 76 | 362 | 1.62e-30 | 125 |
Msa1195300 | AT1G80770.3 | 27.241 | 290 | 206 | 2 | 6 | 293 | 69 | 355 | 2.83e-30 | 124 |
Msa1195300 | AT1G80770.1 | 25.967 | 362 | 256 | 4 | 6 | 365 | 92 | 443 | 4.02e-30 | 124 |
Msa1195300 | AT1G80770.2 | 28.448 | 232 | 166 | 0 | 62 | 293 | 51 | 282 | 4.61e-30 | 122 |
Msa1195300 | AT1G80770.5 | 25.967 | 362 | 256 | 4 | 6 | 365 | 107 | 458 | 5.75e-30 | 124 |
Msa1195300 | AT1G80770.6 | 25.967 | 362 | 256 | 4 | 6 | 365 | 123 | 474 | 1.58e-29 | 123 |
Msa1195300 | AT3G23860.1 | 36.757 | 185 | 100 | 6 | 6 | 179 | 6 | 184 | 4.52e-20 | 90.1 |
Msa1195300 | AT3G23860.3 | 36.757 | 185 | 100 | 6 | 6 | 179 | 19 | 197 | 6.82e-20 | 90.1 |
Msa1195300 | AT3G23860.2 | 36.757 | 185 | 100 | 6 | 6 | 179 | 19 | 197 | 6.82e-20 | 90.1 |
Find 165 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATACAAGTGCTTCGGTTTA+AGG | 0.111950 | 8_1:+43168062 | None:intergenic |
GGCATTCTTGTTTCTCTTCT+TGG | 0.114794 | 8_1:+43168117 | None:intergenic |
CATTGATACACCTGGGATTT+TGG | 0.122171 | 8_1:-43169367 | Msa1195300:CDS |
AGATAATCTGCCAGAAATTT+TGG | 0.147637 | 8_1:-43168698 | Msa1195300:CDS |
ATCAAAATAGTCCTGGTATT+TGG | 0.197584 | 8_1:+43169528 | None:intergenic |
CGGGCCGAGTTTGGCGTATT+TGG | 0.198883 | 8_1:-43169592 | Msa1195300:CDS |
TTGTTCTTCTTGGATATATC+AGG | 0.214420 | 8_1:-43169270 | Msa1195300:CDS |
AAACCGAAGCACTTGTATTC+TGG | 0.228894 | 8_1:-43168058 | Msa1195300:CDS |
AATACTGCTAGGAATCTTAT+TGG | 0.238602 | 8_1:-43169726 | Msa1195300:CDS |
TTGTGACCATCCAAAATTTC+TGG | 0.250913 | 8_1:+43168688 | None:intergenic |
TCCTTCTGGTCACGTGGTTT+CGG | 0.274078 | 8_1:+43168889 | None:intergenic |
AGCGGCAATATTGTTCTTCT+TGG | 0.291223 | 8_1:-43169280 | Msa1195300:CDS |
TACACGGAGGCCTTTCCTTC+TGG | 0.303728 | 8_1:+43168875 | None:intergenic |
TATGTTAAGTTGCTTAAATA+TGG | 0.304848 | 8_1:-43169687 | Msa1195300:CDS |
ATAATGCTTTCTCAAATTCA+TGG | 0.310089 | 8_1:+43168747 | None:intergenic |
TCTTGGGCTTGATCCTTCTA+TGG | 0.315254 | 8_1:-43168380 | Msa1195300:CDS |
ATCCCATCGTTTCTTCCTTC+TGG | 0.317491 | 8_1:+43168298 | None:intergenic |
TGCTTGAAGGTTGCTGCTCT+TGG | 0.323045 | 8_1:-43169642 | Msa1195300:CDS |
TTTGAGAAAGCATTATATTC+TGG | 0.326466 | 8_1:-43168740 | Msa1195300:CDS |
TGAAGCAAATCCCCGTAAAA+AGG | 0.333378 | 8_1:+43169795 | None:intergenic |
GCTAAAGCCTCTTGCTGTTC+CGG | 0.334792 | 8_1:+43168544 | None:intergenic |
GTAGATCACTGTCTCGTTCC+AGG | 0.336726 | 8_1:-43168234 | Msa1195300:CDS |
GCGCCTGTCTGTCTTTCCTT+TGG | 0.337022 | 8_1:+43168027 | None:intergenic |
AAGGATCTGGAGGAAGAAAA+TGG | 0.337588 | 8_1:-43168787 | Msa1195300:CDS |
TAAGAGGATCGGGCCGAGTT+TGG | 0.344785 | 8_1:-43169601 | Msa1195300:CDS |
TCGATGAGTTTCCTCGTCTT+GGG | 0.355491 | 8_1:-43169827 | Msa1195300:CDS |
GGAAGGCAGCTGTCGTCTCT+TGG | 0.361895 | 8_1:-43168397 | Msa1195300:CDS |
TTGTTCCTGGAGAAGGCCTT+AGG | 0.365376 | 8_1:-43168186 | Msa1195300:CDS |
TAATCTTCTTGAAATTGTAT+TGG | 0.368006 | 8_1:+43170018 | None:intergenic |
ACGAGGAAACTCATCGATTA+TGG | 0.370750 | 8_1:+43169833 | None:intergenic |
CCACCACATGAAGTTGTTCC+TGG | 0.371926 | 8_1:-43168199 | Msa1195300:CDS |
GTGAAATTGCATAGCCTTTG+TGG | 0.373188 | 8_1:+43169922 | None:intergenic |
TGGATATATCAGGGTCTTGT+GGG | 0.379230 | 8_1:-43169260 | Msa1195300:CDS |
TCCACCCTATGTAGAATGTC+AGG | 0.383879 | 8_1:+43168646 | None:intergenic |
TGGAAAGAGAGGAAGGGTTA+AGG | 0.386417 | 8_1:-43168618 | Msa1195300:CDS |
TACCACTAAGTCGCTGTTTG+TGG | 0.397916 | 8_1:-43169424 | Msa1195300:CDS |
ATCGATGAGTTTCCTCGTCT+TGG | 0.401400 | 8_1:-43169828 | Msa1195300:CDS |
GCTTGAAGGTTGCTGCTCTT+GGG | 0.424098 | 8_1:-43169641 | Msa1195300:CDS |
GCTTTAGCTTCCAAAACTGC+TGG | 0.426248 | 8_1:+43168847 | None:intergenic |
TTGGATATATCAGGGTCTTG+TGG | 0.430521 | 8_1:-43169261 | Msa1195300:CDS |
ACCCACAAACAGCGACTTAG+TGG | 0.433204 | 8_1:+43169422 | None:intergenic |
AAAGAACTCTTCCCCACATT+GGG | 0.437955 | 8_1:+43169495 | None:intergenic |
AAGAGGCTTTAGCTGAGATT+AGG | 0.440739 | 8_1:-43168534 | Msa1195300:CDS |
ACCACTAAGTCGCTGTTTGT+GGG | 0.442566 | 8_1:-43169423 | Msa1195300:CDS |
AACAGTTGGTGTTTGACGTT+GGG | 0.443269 | 8_1:+43169947 | None:intergenic |
TGGCGTATTTGGAGCAGGTT+AGG | 0.444195 | 8_1:-43169581 | Msa1195300:CDS |
GAAGCGTTGAAGACTTCAAT+TGG | 0.448210 | 8_1:-43169087 | Msa1195300:CDS |
GAAGAGTTGGAAAGAGAGGA+AGG | 0.448886 | 8_1:-43168625 | Msa1195300:CDS |
GAAGGCAGCTGTCGTCTCTT+GGG | 0.448895 | 8_1:-43168396 | Msa1195300:CDS |
CAAGACTGATTTGCAGCCAT+TGG | 0.453115 | 8_1:-43169157 | Msa1195300:CDS |
GCAGTTCACAACAGAAAGAA+TGG | 0.457219 | 8_1:-43168419 | Msa1195300:CDS |
GGAGCAGGTTAGGCAGCATA+TGG | 0.458049 | 8_1:-43169571 | Msa1195300:CDS |
GGATGTGTACCGTGCTTAAG+AGG | 0.460298 | 8_1:-43169617 | Msa1195300:CDS |
GTCGCTGTTTGTGGGTCATA+CGG | 0.461201 | 8_1:-43169415 | Msa1195300:CDS |
AAATCAACGACTGTCTGAAC+AGG | 0.462069 | 8_1:-43168927 | Msa1195300:CDS |
GGTGGAAGAGTTGGAAAGAG+AGG | 0.462216 | 8_1:-43168629 | Msa1195300:CDS |
CTGAGACGCTGTTTCTTGCT+AGG | 0.462261 | 8_1:+43168256 | None:intergenic |
TTTCCAGAATACAAGTGCTT+CGG | 0.468413 | 8_1:+43168055 | None:intergenic |
GTATCGCTGTAAGTGCTTGA+AGG | 0.470038 | 8_1:-43169655 | Msa1195300:CDS |
TCGAATTTCCTTGAAACGGT+TGG | 0.471228 | 8_1:+43168451 | None:intergenic |
AGAGCCGACCAACCGTTTCA+AGG | 0.471571 | 8_1:-43168459 | Msa1195300:CDS |
AAGATTACCGTCGTACCAAA+TGG | 0.472320 | 8_1:-43170002 | Msa1195300:CDS |
ATTCTGTTAATAGCCATAGA+AGG | 0.473599 | 8_1:+43168367 | None:intergenic |
CAAGGAAATTCGACAAGGAC+AGG | 0.474490 | 8_1:-43168441 | Msa1195300:CDS |
CTTGTCGAATTTCCTTGAAA+CGG | 0.475481 | 8_1:+43168447 | None:intergenic |
CTGGTATTTGGATCAATTGA+AGG | 0.475786 | 8_1:+43169540 | None:intergenic |
ACTGATTTGCAGCCATTGGA+TGG | 0.491871 | 8_1:-43169153 | Msa1195300:CDS |
CTTTAGCTTCCAAAACTGCT+GGG | 0.494188 | 8_1:+43168848 | None:intergenic |
GAGTTTGGCGTATTTGGAGC+AGG | 0.497385 | 8_1:-43169586 | Msa1195300:CDS |
TGGGTATACTATTGCTCAGC+AGG | 0.498609 | 8_1:-43169241 | Msa1195300:CDS |
ATAATATTCCGATCCTCAAA+CGG | 0.499586 | 8_1:+43169339 | None:intergenic |
TGTTCCTGGAGAAGGCCTTA+GGG | 0.506108 | 8_1:-43168185 | Msa1195300:CDS |
TCTACATAGGGTGGAAGAGT+TGG | 0.506957 | 8_1:-43168638 | Msa1195300:CDS |
TCATCTTAATCTCAACCCTC+TGG | 0.510875 | 8_1:+43168959 | None:intergenic |
TCTATCAGCTTCTCCACGCT+TGG | 0.514227 | 8_1:+43168096 | None:intergenic |
TGGATAGGCCGTTTGAGGAT+CGG | 0.514877 | 8_1:-43169347 | Msa1195300:CDS |
ATACGGATTATAAGTATTTG+AGG | 0.516463 | 8_1:-43169398 | Msa1195300:CDS |
CATGAAGTTGTTCCTGGAGA+AGG | 0.522867 | 8_1:-43168193 | Msa1195300:CDS |
GAGGAAGAAAATGGAGGCGC+TGG | 0.523495 | 8_1:-43168778 | Msa1195300:CDS |
GTACCGTGCTTAAGAGGATC+GGG | 0.523903 | 8_1:-43169611 | Msa1195300:CDS |
AGGCTTTAGCTGAGATTAGG+AGG | 0.525671 | 8_1:-43168531 | Msa1195300:CDS |
AAAAGAACTCTTCCCCACAT+TGG | 0.525806 | 8_1:+43169494 | None:intergenic |
GATCATTACAAGCTTGCACT+TGG | 0.533978 | 8_1:-43169756 | Msa1195300:CDS |
TTGAAGACTTCAATTGGTCA+TGG | 0.534533 | 8_1:-43169081 | Msa1195300:CDS |
ATATTCTGGCTGATGATGAA+TGG | 0.535908 | 8_1:-43168726 | Msa1195300:CDS |
CATCTAGGAAAGGTCGGAAG+AGG | 0.537520 | 8_1:-43168330 | Msa1195300:CDS |
GGCCTTTCCTTCTGGTCACG+TGG | 0.537839 | 8_1:+43168883 | None:intergenic |
CAGTTCACAACAGAAAGAAT+GGG | 0.538822 | 8_1:-43168418 | Msa1195300:CDS |
TGTTCTTCTTGGATATATCA+GGG | 0.539338 | 8_1:-43169269 | Msa1195300:CDS |
CTGGTTCAGCAATCTCTCAC+AGG | 0.539812 | 8_1:+43168978 | None:intergenic |
GCTTCATGTGTTGTATAACA+AGG | 0.540196 | 8_1:-43169778 | Msa1195300:CDS |
GCTCCAAAGGAAAGACAGAC+AGG | 0.543840 | 8_1:-43168030 | Msa1195300:CDS |
ATCTGAGGAGGATATGAAGT+TGG | 0.544907 | 8_1:-43169127 | Msa1195300:CDS |
TTGACCCTGACATTCTACAT+AGG | 0.545444 | 8_1:-43168651 | Msa1195300:CDS |
CTGATTTGCAGCCATTGGAT+GGG | 0.545790 | 8_1:-43169152 | Msa1195300:CDS |
TGAAGGTTGCTGCTCTTGGG+AGG | 0.546694 | 8_1:-43169638 | Msa1195300:CDS |
TGGTCATGGAGGTGAGGGGA+CGG | 0.547392 | 8_1:-43169067 | Msa1195300:CDS |
ATTTCCTTGAAACGGTTGGT+CGG | 0.548211 | 8_1:+43168455 | None:intergenic |
GACTTAGTGGTAAACGCATA+CGG | 0.548539 | 8_1:+43169435 | None:intergenic |
CCCACAAATCAAAATAGTCC+TGG | 0.549797 | 8_1:+43169521 | None:intergenic |
GAATCCCTAAGGCCTTCTCC+AGG | 0.554177 | 8_1:+43168181 | None:intergenic |
TATCAAGTCATTGATACACC+TGG | 0.555673 | 8_1:-43169375 | Msa1195300:CDS |
CAAAGCAATTAAACTTGCGA+AGG | 0.557324 | 8_1:-43168146 | Msa1195300:CDS |
TCAATTGGTCATGGAGGTGA+GGG | 0.557674 | 8_1:-43169072 | Msa1195300:CDS |
AAGAGAGGAAGGGTTAAGGC+AGG | 0.562461 | 8_1:-43168614 | Msa1195300:CDS |
TTCAATTGGTCATGGAGGTG+AGG | 0.562813 | 8_1:-43169073 | Msa1195300:CDS |
CAACAGTTGGTGTTTGACGT+TGG | 0.563591 | 8_1:+43169946 | None:intergenic |
ATGAGTGCGTTGACTGAAGA+AGG | 0.569510 | 8_1:-43169024 | Msa1195300:CDS |
TTCTTCAGTCAACGCACTCA+TGG | 0.570366 | 8_1:+43169026 | None:intergenic |
TGTACCGTGCTTAAGAGGAT+CGG | 0.572031 | 8_1:-43169612 | Msa1195300:CDS |
TTGTTGCACACAACAATCAA+AGG | 0.575746 | 8_1:+43169177 | None:intergenic |
TGACCCTGACATTCTACATA+GGG | 0.576210 | 8_1:-43168650 | Msa1195300:CDS |
CGATGAGTTTCCTCGTCTTG+GGG | 0.576928 | 8_1:-43169826 | Msa1195300:CDS |
CTTCAATTGATCCAAATACC+AGG | 0.577769 | 8_1:-43169539 | Msa1195300:CDS |
GATTTGTGGGTATCCCAATG+TGG | 0.577997 | 8_1:-43169508 | Msa1195300:CDS |
TATTCTGGAAAGCGCTCCAA+AGG | 0.584874 | 8_1:-43168043 | Msa1195300:CDS |
TCCGAAACCACGTGACCAGA+AGG | 0.588470 | 8_1:-43168890 | Msa1195300:CDS |
ATTTGTGGGTATCCCAATGT+GGG | 0.589074 | 8_1:-43169507 | Msa1195300:CDS |
AACGGCCTATCCAAAATCCC+AGG | 0.591191 | 8_1:+43169357 | None:intergenic |
TGCTCCAAATACGCCAAACT+CGG | 0.596293 | 8_1:+43169588 | None:intergenic |
TTTAGCTTCCAAAACTGCTG+GGG | 0.597660 | 8_1:+43168849 | None:intergenic |
TGCTCTTGCGCATTTGAGAG+CGG | 0.605421 | 8_1:-43169298 | Msa1195300:CDS |
AAGAGTTGGAAAGAGAGGAA+GGG | 0.605706 | 8_1:-43168624 | Msa1195300:CDS |
CCCTGACATTCTACATAGGG+TGG | 0.608061 | 8_1:-43168647 | Msa1195300:CDS |
AACCACGTGACCAGAAGGAA+AGG | 0.608119 | 8_1:-43168885 | Msa1195300:CDS |
AGCTAAGCAAACAGCCGCTG+AGG | 0.608160 | 8_1:-43168827 | Msa1195300:CDS |
TCACCAGAAGGAAGAAACGA+TGG | 0.608184 | 8_1:-43168301 | Msa1195300:CDS |
ATCACTGTCTCGTTCCAGGT+CGG | 0.608845 | 8_1:-43168230 | Msa1195300:CDS |
TTGGTCAGATTAATACTGCT+AGG | 0.610371 | 8_1:-43169737 | Msa1195300:CDS |
AGAAGGAAGAAACGATGGGA+TGG | 0.612953 | 8_1:-43168296 | Msa1195300:CDS |
TTAGCTTCCAAAACTGCTGG+GGG | 0.613606 | 8_1:+43168850 | None:intergenic |
CACCAGAAGGAAGAAACGAT+GGG | 0.615415 | 8_1:-43168300 | Msa1195300:CDS |
TGCGTAGCAGATCTGCATCT+AGG | 0.616314 | 8_1:-43168345 | Msa1195300:CDS |
TCCTCAGATAACCCATCCAA+TGG | 0.618486 | 8_1:+43169141 | None:intergenic |
GCCATTGGATGGGTTATCTG+AGG | 0.618785 | 8_1:-43169142 | Msa1195300:CDS |
ATTGACACCGGAACAGCAAG+AGG | 0.621917 | 8_1:-43168551 | Msa1195300:CDS |
AGGTTAGGCAGCATATGGCT+AGG | 0.623301 | 8_1:-43169566 | Msa1195300:CDS |
GTGAGAGATTGCTGAACCAG+AGG | 0.624481 | 8_1:-43168975 | Msa1195300:CDS |
ATCAAGTCATTGATACACCT+GGG | 0.625389 | 8_1:-43169374 | Msa1195300:CDS |
AGCAGATCTGCATCTAGGAA+AGG | 0.625927 | 8_1:-43168340 | Msa1195300:CDS |
TCTCCAGGAACAACTTCATG+TGG | 0.626458 | 8_1:+43168196 | None:intergenic |
AAAGCAATTAAACTTGCGAA+GGG | 0.631135 | 8_1:-43168145 | Msa1195300:CDS |
CCACCCTATGTAGAATGTCA+GGG | 0.631460 | 8_1:+43168647 | None:intergenic |
ATCTAGGAAAGGTCGGAAGA+GGG | 0.633227 | 8_1:-43168329 | Msa1195300:CDS |
AGAAACAAGAATGCCAAGCG+TGG | 0.633691 | 8_1:-43168109 | Msa1195300:CDS |
TAGCCTTTGTGGACAACAGT+TGG | 0.638716 | 8_1:+43169933 | None:intergenic |
GATCTGCATCTAGGAAAGGT+CGG | 0.639204 | 8_1:-43168336 | Msa1195300:CDS |
CCAGGAACAACTTCATGTGG+TGG | 0.642177 | 8_1:+43168199 | None:intergenic |
TGGTGGTCGAGAGACCGACC+TGG | 0.644261 | 8_1:+43168216 | None:intergenic |
GGATGAATGTCCCCAAGACG+AGG | 0.644458 | 8_1:+43169816 | None:intergenic |
ACACCAACTGTTGTCCACAA+AGG | 0.647881 | 8_1:-43169936 | Msa1195300:CDS |
ATTGGATGGGTTATCTGAGG+AGG | 0.651460 | 8_1:-43169139 | Msa1195300:CDS |
GTATTCTAATCCAACAACAT+CGG | 0.653178 | 8_1:-43168501 | Msa1195300:CDS |
AAGAGGGAGAGATCACCAGA+AGG | 0.653816 | 8_1:-43168313 | Msa1195300:CDS |
CGTTTCAAGGAAATTCGACA+AGG | 0.654192 | 8_1:-43168446 | Msa1195300:CDS |
TCACAACAGAAAGAATGGGA+AGG | 0.666061 | 8_1:-43168414 | Msa1195300:CDS |
AAGACTTCAATTGGTCATGG+AGG | 0.667217 | 8_1:-43169078 | Msa1195300:CDS |
AGATGGAACTGAATTGACAC+CGG | 0.673997 | 8_1:-43168563 | Msa1195300:CDS |
CTTAATACTCTGAAACAAAG+CGG | 0.685991 | 8_1:+43169218 | None:intergenic |
TGAGAGATTGCTGAACCAGA+GGG | 0.687755 | 8_1:-43168974 | Msa1195300:CDS |
CAATTGGTCATGGAGGTGAG+GGG | 0.688118 | 8_1:-43169071 | Msa1195300:CDS |
CGGCCCGATCCTCTTAAGCA+CGG | 0.691974 | 8_1:+43169608 | None:intergenic |
GACTGAAGAAGGTGTGATTG+CGG | 0.713697 | 8_1:-43169013 | Msa1195300:CDS |
TTTGTGGGTATCCCAATGTG+GGG | 0.728696 | 8_1:-43169506 | Msa1195300:CDS |
GATCTGGAGGAAGAAAATGG+AGG | 0.758299 | 8_1:-43168784 | Msa1195300:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATTAACAAGATTACTA+GGG | - | chr8_1:43168572-43168591 | Msa1195300:CDS | 15.0% |
!!! | TTTTATTAACAAGATTACTA+GGG | - | chr8_1:43168572-43168591 | Msa1195300:CDS | 15.0% |
!! | TAATCTTCTTGAAATTGTAT+TGG | + | chr8_1:43168032-43168051 | None:intergenic | 20.0% |
!!! | TATGTTAAGTTGCTTAAATA+TGG | - | chr8_1:43168360-43168379 | Msa1195300:CDS | 20.0% |
!!! | CTTTTATTAACAAGATTACT+AGG | - | chr8_1:43168571-43168590 | Msa1195300:CDS | 20.0% |
!! | TAATCTTCTTGAAATTGTAT+TGG | + | chr8_1:43168032-43168051 | None:intergenic | 20.0% |
!!! | TATGTTAAGTTGCTTAAATA+TGG | - | chr8_1:43168360-43168379 | Msa1195300:CDS | 20.0% |
!!! | CTTTTATTAACAAGATTACT+AGG | - | chr8_1:43168571-43168590 | Msa1195300:CDS | 20.0% |
!!! | CTTTTCATGAAAATTAGTCT+GGG | + | chr8_1:43168187-43168206 | None:intergenic | 25.0% |
!! | ATACGGATTATAAGTATTTG+AGG | - | chr8_1:43168649-43168668 | Msa1195300:CDS | 25.0% |
! | ATAATGCTTTCTCAAATTCA+TGG | + | chr8_1:43169303-43169322 | None:intergenic | 25.0% |
!!! | TTTGAGAAAGCATTATATTC+TGG | - | chr8_1:43169307-43169326 | Msa1195300:CDS | 25.0% |
!!! | CTTTTCATGAAAATTAGTCT+GGG | + | chr8_1:43168187-43168206 | None:intergenic | 25.0% |
!! | ATACGGATTATAAGTATTTG+AGG | - | chr8_1:43168649-43168668 | Msa1195300:CDS | 25.0% |
! | ATAATGCTTTCTCAAATTCA+TGG | + | chr8_1:43169303-43169322 | None:intergenic | 25.0% |
!!! | TTTGAGAAAGCATTATATTC+TGG | - | chr8_1:43169307-43169326 | Msa1195300:CDS | 25.0% |
! | TCAACGAAATCTTTTCCATT+TGG | + | chr8_1:43168063-43168082 | None:intergenic | 30.0% |
! | GCTTTTCATGAAAATTAGTC+TGG | + | chr8_1:43168188-43168207 | None:intergenic | 30.0% |
AATACTGCTAGGAATCTTAT+TGG | - | chr8_1:43168321-43168340 | Msa1195300:CDS | 30.0% | |
ATCAAAATAGTCCTGGTATT+TGG | + | chr8_1:43168522-43168541 | None:intergenic | 30.0% | |
ATAATATTCCGATCCTCAAA+CGG | + | chr8_1:43168711-43168730 | None:intergenic | 30.0% | |
TTGTTCTTCTTGGATATATC+AGG | - | chr8_1:43168777-43168796 | Msa1195300:CDS | 30.0% | |
TGTTCTTCTTGGATATATCA+GGG | - | chr8_1:43168778-43168797 | Msa1195300:CDS | 30.0% | |
!! | CTTAATACTCTGAAACAAAG+CGG | + | chr8_1:43168832-43168851 | None:intergenic | 30.0% |
! | AGATAATCTGCCAGAAATTT+TGG | - | chr8_1:43169349-43169368 | Msa1195300:CDS | 30.0% |
!!! | GATGATGATTTTGAGATAGA+TGG | - | chr8_1:43169467-43169486 | Msa1195300:CDS | 30.0% |
GTATTCTAATCCAACAACAT+CGG | - | chr8_1:43169546-43169565 | Msa1195300:CDS | 30.0% | |
! | TCTTTTTAATCCGATGTTGT+TGG | + | chr8_1:43169559-43169578 | None:intergenic | 30.0% |
ATTCTGTTAATAGCCATAGA+AGG | + | chr8_1:43169683-43169702 | None:intergenic | 30.0% | |
AAAGCAATTAAACTTGCGAA+GGG | - | chr8_1:43169902-43169921 | Msa1195300:CDS | 30.0% | |
! | TCAACGAAATCTTTTCCATT+TGG | + | chr8_1:43168063-43168082 | None:intergenic | 30.0% |
! | GCTTTTCATGAAAATTAGTC+TGG | + | chr8_1:43168188-43168207 | None:intergenic | 30.0% |
AATACTGCTAGGAATCTTAT+TGG | - | chr8_1:43168321-43168340 | Msa1195300:CDS | 30.0% | |
ATCAAAATAGTCCTGGTATT+TGG | + | chr8_1:43168522-43168541 | None:intergenic | 30.0% | |
ATAATATTCCGATCCTCAAA+CGG | + | chr8_1:43168711-43168730 | None:intergenic | 30.0% | |
TTGTTCTTCTTGGATATATC+AGG | - | chr8_1:43168777-43168796 | Msa1195300:CDS | 30.0% | |
TGTTCTTCTTGGATATATCA+GGG | - | chr8_1:43168778-43168797 | Msa1195300:CDS | 30.0% | |
!! | CTTAATACTCTGAAACAAAG+CGG | + | chr8_1:43168832-43168851 | None:intergenic | 30.0% |
! | AGATAATCTGCCAGAAATTT+TGG | - | chr8_1:43169349-43169368 | Msa1195300:CDS | 30.0% |
!!! | GATGATGATTTTGAGATAGA+TGG | - | chr8_1:43169467-43169486 | Msa1195300:CDS | 30.0% |
GTATTCTAATCCAACAACAT+CGG | - | chr8_1:43169546-43169565 | Msa1195300:CDS | 30.0% | |
! | TCTTTTTAATCCGATGTTGT+TGG | + | chr8_1:43169559-43169578 | None:intergenic | 30.0% |
ATTCTGTTAATAGCCATAGA+AGG | + | chr8_1:43169683-43169702 | None:intergenic | 30.0% | |
AAAGCAATTAAACTTGCGAA+GGG | - | chr8_1:43169902-43169921 | Msa1195300:CDS | 30.0% | |
! | ATCTTTTCCATTTGGTACGA+CGG | + | chr8_1:43168055-43168074 | None:intergenic | 35.0% |
! | CTTTTCGCATGTAGAATTGT+CGG | + | chr8_1:43168155-43168174 | None:intergenic | 35.0% |
GCTTCATGTGTTGTATAACA+AGG | - | chr8_1:43168269-43168288 | Msa1195300:CDS | 35.0% | |
TTGGTCAGATTAATACTGCT+AGG | - | chr8_1:43168310-43168329 | Msa1195300:CDS | 35.0% | |
CTGGTATTTGGATCAATTGA+AGG | + | chr8_1:43168510-43168529 | None:intergenic | 35.0% | |
CTTCAATTGATCCAAATACC+AGG | - | chr8_1:43168508-43168527 | Msa1195300:CDS | 35.0% | |
!!! | ACCAGGACTATTTTGATTTG+TGG | - | chr8_1:43168525-43168544 | Msa1195300:CDS | 35.0% |
!!! | CCAGGACTATTTTGATTTGT+GGG | - | chr8_1:43168526-43168545 | Msa1195300:CDS | 35.0% |
TATCAAGTCATTGATACACC+TGG | - | chr8_1:43168672-43168691 | Msa1195300:CDS | 35.0% | |
ATCAAGTCATTGATACACCT+GGG | - | chr8_1:43168673-43168692 | Msa1195300:CDS | 35.0% | |
TTGTTGCACACAACAATCAA+AGG | + | chr8_1:43168873-43168892 | None:intergenic | 35.0% | |
TTGAAGACTTCAATTGGTCA+TGG | - | chr8_1:43168966-43168985 | Msa1195300:CDS | 35.0% | |
! | ATATTCTGGCTGATGATGAA+TGG | - | chr8_1:43169321-43169340 | Msa1195300:CDS | 35.0% |
! | AATCTGCCAGAAATTTTGGA+TGG | - | chr8_1:43169353-43169372 | Msa1195300:CDS | 35.0% |
TTGTGACCATCCAAAATTTC+TGG | + | chr8_1:43169362-43169381 | None:intergenic | 35.0% | |
CTTGTCGAATTTCCTTGAAA+CGG | + | chr8_1:43169603-43169622 | None:intergenic | 35.0% | |
CAGTTCACAACAGAAAGAAT+GGG | - | chr8_1:43169629-43169648 | Msa1195300:CDS | 35.0% | |
CAAAGCAATTAAACTTGCGA+AGG | - | chr8_1:43169901-43169920 | Msa1195300:CDS | 35.0% | |
AATACAAGTGCTTCGGTTTA+AGG | + | chr8_1:43169988-43170007 | None:intergenic | 35.0% | |
TTTCCAGAATACAAGTGCTT+CGG | + | chr8_1:43169995-43170014 | None:intergenic | 35.0% | |
! | ATCTTTTCCATTTGGTACGA+CGG | + | chr8_1:43168055-43168074 | None:intergenic | 35.0% |
! | CTTTTCGCATGTAGAATTGT+CGG | + | chr8_1:43168155-43168174 | None:intergenic | 35.0% |
GCTTCATGTGTTGTATAACA+AGG | - | chr8_1:43168269-43168288 | Msa1195300:CDS | 35.0% | |
TTGGTCAGATTAATACTGCT+AGG | - | chr8_1:43168310-43168329 | Msa1195300:CDS | 35.0% | |
CTGGTATTTGGATCAATTGA+AGG | + | chr8_1:43168510-43168529 | None:intergenic | 35.0% | |
CTTCAATTGATCCAAATACC+AGG | - | chr8_1:43168508-43168527 | Msa1195300:CDS | 35.0% | |
!!! | ACCAGGACTATTTTGATTTG+TGG | - | chr8_1:43168525-43168544 | Msa1195300:CDS | 35.0% |
!!! | CCAGGACTATTTTGATTTGT+GGG | - | chr8_1:43168526-43168545 | Msa1195300:CDS | 35.0% |
TATCAAGTCATTGATACACC+TGG | - | chr8_1:43168672-43168691 | Msa1195300:CDS | 35.0% | |
ATCAAGTCATTGATACACCT+GGG | - | chr8_1:43168673-43168692 | Msa1195300:CDS | 35.0% | |
TTGTTGCACACAACAATCAA+AGG | + | chr8_1:43168873-43168892 | None:intergenic | 35.0% | |
TTGAAGACTTCAATTGGTCA+TGG | - | chr8_1:43168966-43168985 | Msa1195300:CDS | 35.0% | |
! | ATATTCTGGCTGATGATGAA+TGG | - | chr8_1:43169321-43169340 | Msa1195300:CDS | 35.0% |
! | AATCTGCCAGAAATTTTGGA+TGG | - | chr8_1:43169353-43169372 | Msa1195300:CDS | 35.0% |
TTGTGACCATCCAAAATTTC+TGG | + | chr8_1:43169362-43169381 | None:intergenic | 35.0% | |
CTTGTCGAATTTCCTTGAAA+CGG | + | chr8_1:43169603-43169622 | None:intergenic | 35.0% | |
CAGTTCACAACAGAAAGAAT+GGG | - | chr8_1:43169629-43169648 | Msa1195300:CDS | 35.0% | |
CAAAGCAATTAAACTTGCGA+AGG | - | chr8_1:43169901-43169920 | Msa1195300:CDS | 35.0% | |
AATACAAGTGCTTCGGTTTA+AGG | + | chr8_1:43169988-43170007 | None:intergenic | 35.0% | |
TTTCCAGAATACAAGTGCTT+CGG | + | chr8_1:43169995-43170014 | None:intergenic | 35.0% | |
AAGATTACCGTCGTACCAAA+TGG | - | chr8_1:43168045-43168064 | Msa1195300:CDS | 40.0% | |
! | AACAGTTGGTGTTTGACGTT+GGG | + | chr8_1:43168103-43168122 | None:intergenic | 40.0% |
GTGAAATTGCATAGCCTTTG+TGG | + | chr8_1:43168128-43168147 | None:intergenic | 40.0% | |
! | ACGAGGAAACTCATCGATTA+TGG | + | chr8_1:43168217-43168236 | None:intergenic | 40.0% |
! | GGGGACATTCATCCTTTTTA+CGG | - | chr8_1:43168240-43168259 | Msa1195300:CDS | 40.0% |
! | GGGACATTCATCCTTTTTAC+GGG | - | chr8_1:43168241-43168260 | Msa1195300:CDS | 40.0% |
! | GGACATTCATCCTTTTTACG+GGG | - | chr8_1:43168242-43168261 | Msa1195300:CDS | 40.0% |
TGAAGCAAATCCCCGTAAAA+AGG | + | chr8_1:43168255-43168274 | None:intergenic | 40.0% | |
GATCATTACAAGCTTGCACT+TGG | - | chr8_1:43168291-43168310 | Msa1195300:CDS | 40.0% | |
CCCACAAATCAAAATAGTCC+TGG | + | chr8_1:43168529-43168548 | None:intergenic | 40.0% | |
ATTTGTGGGTATCCCAATGT+GGG | - | chr8_1:43168540-43168559 | Msa1195300:CDS | 40.0% | |
AAAGAACTCTTCCCCACATT+GGG | + | chr8_1:43168555-43168574 | None:intergenic | 40.0% | |
AAAAGAACTCTTCCCCACAT+TGG | + | chr8_1:43168556-43168575 | None:intergenic | 40.0% | |
GACTTAGTGGTAAACGCATA+CGG | + | chr8_1:43168615-43168634 | None:intergenic | 40.0% | |
! | CATTGATACACCTGGGATTT+TGG | - | chr8_1:43168680-43168699 | Msa1195300:CDS | 40.0% |
! | ATACACCTGGGATTTTGGAT+AGG | - | chr8_1:43168685-43168704 | Msa1195300:CDS | 40.0% |
AGCGGCAATATTGTTCTTCT+TGG | - | chr8_1:43168767-43168786 | Msa1195300:CDS | 40.0% | |
TTGGATATATCAGGGTCTTG+TGG | - | chr8_1:43168786-43168805 | Msa1195300:CDS | 40.0% | |
! | TGGATATATCAGGGTCTTGT+GGG | - | chr8_1:43168787-43168806 | Msa1195300:CDS | 40.0% |
ATCTGAGGAGGATATGAAGT+TGG | - | chr8_1:43168920-43168939 | Msa1195300:CDS | 40.0% | |
!! | GAAGCGTTGAAGACTTCAAT+TGG | - | chr8_1:43168960-43168979 | Msa1195300:CDS | 40.0% |
AAGACTTCAATTGGTCATGG+AGG | - | chr8_1:43168969-43168988 | Msa1195300:CDS | 40.0% | |
TCATCTTAATCTCAACCCTC+TGG | + | chr8_1:43169091-43169110 | None:intergenic | 40.0% | |
AAATCAACGACTGTCTGAAC+AGG | - | chr8_1:43169120-43169139 | Msa1195300:CDS | 40.0% | |
! | TTTAGCTTCCAAAACTGCTG+GGG | + | chr8_1:43169201-43169220 | None:intergenic | 40.0% |
! | CTTTAGCTTCCAAAACTGCT+GGG | + | chr8_1:43169202-43169221 | None:intergenic | 40.0% |
! | AGTTTTTCTCTTCTCCTCAG+CGG | + | chr8_1:43169237-43169256 | None:intergenic | 40.0% |
GGAGAAGAGAAAAACTGAGA+AGG | - | chr8_1:43169241-43169260 | Msa1195300:CDS | 40.0% | |
GAGAAAAACTGAGAAGGATC+TGG | - | chr8_1:43169247-43169266 | Msa1195300:CDS | 40.0% | |
AAAAACTGAGAAGGATCTGG+AGG | - | chr8_1:43169250-43169269 | Msa1195300:CDS | 40.0% | |
AAGGATCTGGAGGAAGAAAA+TGG | - | chr8_1:43169260-43169279 | Msa1195300:CDS | 40.0% | |
TTGACCCTGACATTCTACAT+AGG | - | chr8_1:43169396-43169415 | Msa1195300:CDS | 40.0% | |
TGACCCTGACATTCTACATA+GGG | - | chr8_1:43169397-43169416 | Msa1195300:CDS | 40.0% | |
AAGAGTTGGAAAGAGAGGAA+GGG | - | chr8_1:43169423-43169442 | Msa1195300:CDS | 40.0% | |
AGATGGAACTGAATTGACAC+CGG | - | chr8_1:43169484-43169503 | Msa1195300:CDS | 40.0% | |
! | AAGAGGCTTTAGCTGAGATT+AGG | - | chr8_1:43169513-43169532 | Msa1195300:CDS | 40.0% |
ATTTCCTTGAAACGGTTGGT+CGG | + | chr8_1:43169595-43169614 | None:intergenic | 40.0% | |
TCGAATTTCCTTGAAACGGT+TGG | + | chr8_1:43169599-43169618 | None:intergenic | 40.0% | |
CGTTTCAAGGAAATTCGACA+AGG | - | chr8_1:43169601-43169620 | Msa1195300:CDS | 40.0% | |
GCAGTTCACAACAGAAAGAA+TGG | - | chr8_1:43169628-43169647 | Msa1195300:CDS | 40.0% | |
TCACAACAGAAAGAATGGGA+AGG | - | chr8_1:43169633-43169652 | Msa1195300:CDS | 40.0% | |
! | TCTTTTGAGCAGAATCCCTA+AGG | + | chr8_1:43169880-43169899 | None:intergenic | 40.0% |
! | GGCATTCTTGTTTCTCTTCT+TGG | + | chr8_1:43169933-43169952 | None:intergenic | 40.0% |
! | AAACCGAAGCACTTGTATTC+TGG | - | chr8_1:43169989-43170008 | Msa1195300:CDS | 40.0% |
AAGATTACCGTCGTACCAAA+TGG | - | chr8_1:43168045-43168064 | Msa1195300:CDS | 40.0% | |
! | AACAGTTGGTGTTTGACGTT+GGG | + | chr8_1:43168103-43168122 | None:intergenic | 40.0% |
GTGAAATTGCATAGCCTTTG+TGG | + | chr8_1:43168128-43168147 | None:intergenic | 40.0% | |
! | ACGAGGAAACTCATCGATTA+TGG | + | chr8_1:43168217-43168236 | None:intergenic | 40.0% |
! | GGGGACATTCATCCTTTTTA+CGG | - | chr8_1:43168240-43168259 | Msa1195300:CDS | 40.0% |
! | GGGACATTCATCCTTTTTAC+GGG | - | chr8_1:43168241-43168260 | Msa1195300:CDS | 40.0% |
! | GGACATTCATCCTTTTTACG+GGG | - | chr8_1:43168242-43168261 | Msa1195300:CDS | 40.0% |
TGAAGCAAATCCCCGTAAAA+AGG | + | chr8_1:43168255-43168274 | None:intergenic | 40.0% | |
GATCATTACAAGCTTGCACT+TGG | - | chr8_1:43168291-43168310 | Msa1195300:CDS | 40.0% | |
CCCACAAATCAAAATAGTCC+TGG | + | chr8_1:43168529-43168548 | None:intergenic | 40.0% | |
ATTTGTGGGTATCCCAATGT+GGG | - | chr8_1:43168540-43168559 | Msa1195300:CDS | 40.0% | |
AAAGAACTCTTCCCCACATT+GGG | + | chr8_1:43168555-43168574 | None:intergenic | 40.0% | |
AAAAGAACTCTTCCCCACAT+TGG | + | chr8_1:43168556-43168575 | None:intergenic | 40.0% | |
GACTTAGTGGTAAACGCATA+CGG | + | chr8_1:43168615-43168634 | None:intergenic | 40.0% | |
! | CATTGATACACCTGGGATTT+TGG | - | chr8_1:43168680-43168699 | Msa1195300:CDS | 40.0% |
! | ATACACCTGGGATTTTGGAT+AGG | - | chr8_1:43168685-43168704 | Msa1195300:CDS | 40.0% |
AGCGGCAATATTGTTCTTCT+TGG | - | chr8_1:43168767-43168786 | Msa1195300:CDS | 40.0% | |
TTGGATATATCAGGGTCTTG+TGG | - | chr8_1:43168786-43168805 | Msa1195300:CDS | 40.0% | |
! | TGGATATATCAGGGTCTTGT+GGG | - | chr8_1:43168787-43168806 | Msa1195300:CDS | 40.0% |
ATCTGAGGAGGATATGAAGT+TGG | - | chr8_1:43168920-43168939 | Msa1195300:CDS | 40.0% | |
!! | GAAGCGTTGAAGACTTCAAT+TGG | - | chr8_1:43168960-43168979 | Msa1195300:CDS | 40.0% |
AAGACTTCAATTGGTCATGG+AGG | - | chr8_1:43168969-43168988 | Msa1195300:CDS | 40.0% | |
TCATCTTAATCTCAACCCTC+TGG | + | chr8_1:43169091-43169110 | None:intergenic | 40.0% | |
AAATCAACGACTGTCTGAAC+AGG | - | chr8_1:43169120-43169139 | Msa1195300:CDS | 40.0% | |
! | TTTAGCTTCCAAAACTGCTG+GGG | + | chr8_1:43169201-43169220 | None:intergenic | 40.0% |
! | CTTTAGCTTCCAAAACTGCT+GGG | + | chr8_1:43169202-43169221 | None:intergenic | 40.0% |
! | AGTTTTTCTCTTCTCCTCAG+CGG | + | chr8_1:43169237-43169256 | None:intergenic | 40.0% |
GGAGAAGAGAAAAACTGAGA+AGG | - | chr8_1:43169241-43169260 | Msa1195300:CDS | 40.0% | |
GAGAAAAACTGAGAAGGATC+TGG | - | chr8_1:43169247-43169266 | Msa1195300:CDS | 40.0% | |
AAAAACTGAGAAGGATCTGG+AGG | - | chr8_1:43169250-43169269 | Msa1195300:CDS | 40.0% | |
AAGGATCTGGAGGAAGAAAA+TGG | - | chr8_1:43169260-43169279 | Msa1195300:CDS | 40.0% | |
TTGACCCTGACATTCTACAT+AGG | - | chr8_1:43169396-43169415 | Msa1195300:CDS | 40.0% | |
TGACCCTGACATTCTACATA+GGG | - | chr8_1:43169397-43169416 | Msa1195300:CDS | 40.0% | |
AAGAGTTGGAAAGAGAGGAA+GGG | - | chr8_1:43169423-43169442 | Msa1195300:CDS | 40.0% | |
AGATGGAACTGAATTGACAC+CGG | - | chr8_1:43169484-43169503 | Msa1195300:CDS | 40.0% | |
! | AAGAGGCTTTAGCTGAGATT+AGG | - | chr8_1:43169513-43169532 | Msa1195300:CDS | 40.0% |
ATTTCCTTGAAACGGTTGGT+CGG | + | chr8_1:43169595-43169614 | None:intergenic | 40.0% | |
TCGAATTTCCTTGAAACGGT+TGG | + | chr8_1:43169599-43169618 | None:intergenic | 40.0% | |
CGTTTCAAGGAAATTCGACA+AGG | - | chr8_1:43169601-43169620 | Msa1195300:CDS | 40.0% | |
GCAGTTCACAACAGAAAGAA+TGG | - | chr8_1:43169628-43169647 | Msa1195300:CDS | 40.0% | |
TCACAACAGAAAGAATGGGA+AGG | - | chr8_1:43169633-43169652 | Msa1195300:CDS | 40.0% | |
! | TCTTTTGAGCAGAATCCCTA+AGG | + | chr8_1:43169880-43169899 | None:intergenic | 40.0% |
! | GGCATTCTTGTTTCTCTTCT+TGG | + | chr8_1:43169933-43169952 | None:intergenic | 40.0% |
! | AAACCGAAGCACTTGTATTC+TGG | - | chr8_1:43169989-43170008 | Msa1195300:CDS | 40.0% |
! | CAACAGTTGGTGTTTGACGT+TGG | + | chr8_1:43168104-43168123 | None:intergenic | 45.0% |
ACACCAACTGTTGTCCACAA+AGG | - | chr8_1:43168111-43168130 | Msa1195300:CDS | 45.0% | |
TAGCCTTTGTGGACAACAGT+TGG | + | chr8_1:43168117-43168136 | None:intergenic | 45.0% | |
ATCGATGAGTTTCCTCGTCT+TGG | - | chr8_1:43168219-43168238 | Msa1195300:CDS | 45.0% | |
TCGATGAGTTTCCTCGTCTT+GGG | - | chr8_1:43168220-43168239 | Msa1195300:CDS | 45.0% | |
GTATCGCTGTAAGTGCTTGA+AGG | - | chr8_1:43168392-43168411 | Msa1195300:CDS | 45.0% | |
TGTACCGTGCTTAAGAGGAT+CGG | - | chr8_1:43168435-43168454 | Msa1195300:CDS | 45.0% | |
TGCTCCAAATACGCCAAACT+CGG | + | chr8_1:43168462-43168481 | None:intergenic | 45.0% | |
GATTTGTGGGTATCCCAATG+TGG | - | chr8_1:43168539-43168558 | Msa1195300:CDS | 45.0% | |
TTTGTGGGTATCCCAATGTG+GGG | - | chr8_1:43168541-43168560 | Msa1195300:CDS | 45.0% | |
TACCACTAAGTCGCTGTTTG+TGG | - | chr8_1:43168623-43168642 | Msa1195300:CDS | 45.0% | |
ACCACTAAGTCGCTGTTTGT+GGG | - | chr8_1:43168624-43168643 | Msa1195300:CDS | 45.0% | |
! | GATTTTGGATAGGCCGTTTG+AGG | - | chr8_1:43168695-43168714 | Msa1195300:CDS | 45.0% |
TGGGTATACTATTGCTCAGC+AGG | - | chr8_1:43168806-43168825 | Msa1195300:CDS | 45.0% | |
!! | CAAGACTGATTTGCAGCCAT+TGG | - | chr8_1:43168890-43168909 | Msa1195300:CDS | 45.0% |
!! | ACTGATTTGCAGCCATTGGA+TGG | - | chr8_1:43168894-43168913 | Msa1195300:CDS | 45.0% |
! | CTGATTTGCAGCCATTGGAT+GGG | - | chr8_1:43168895-43168914 | Msa1195300:CDS | 45.0% |
TCCTCAGATAACCCATCCAA+TGG | + | chr8_1:43168909-43168928 | None:intergenic | 45.0% | |
!! | ATTGGATGGGTTATCTGAGG+AGG | - | chr8_1:43168908-43168927 | Msa1195300:CDS | 45.0% |
TTCAATTGGTCATGGAGGTG+AGG | - | chr8_1:43168974-43168993 | Msa1195300:CDS | 45.0% | |
TCAATTGGTCATGGAGGTGA+GGG | - | chr8_1:43168975-43168994 | Msa1195300:CDS | 45.0% | |
TTCTTCAGTCAACGCACTCA+TGG | + | chr8_1:43169024-43169043 | None:intergenic | 45.0% | |
!! | ATGAGTGCGTTGACTGAAGA+AGG | - | chr8_1:43169023-43169042 | Msa1195300:CDS | 45.0% |
! | GACTGAAGAAGGTGTGATTG+CGG | - | chr8_1:43169034-43169053 | Msa1195300:CDS | 45.0% |
TGAGAGATTGCTGAACCAGA+GGG | - | chr8_1:43169073-43169092 | Msa1195300:CDS | 45.0% | |
AAAACTGCTGGGGGAATACA+CGG | + | chr8_1:43169191-43169210 | None:intergenic | 45.0% | |
TTAGCTTCCAAAACTGCTGG+GGG | + | chr8_1:43169200-43169219 | None:intergenic | 45.0% | |
! | GCTTTAGCTTCCAAAACTGC+TGG | + | chr8_1:43169203-43169222 | None:intergenic | 45.0% |
GATCTGGAGGAAGAAAATGG+AGG | - | chr8_1:43169263-43169282 | Msa1195300:CDS | 45.0% | |
CCACCCTATGTAGAATGTCA+GGG | + | chr8_1:43169403-43169422 | None:intergenic | 45.0% | |
TCCACCCTATGTAGAATGTC+AGG | + | chr8_1:43169404-43169423 | None:intergenic | 45.0% | |
TCTACATAGGGTGGAAGAGT+TGG | - | chr8_1:43169409-43169428 | Msa1195300:CDS | 45.0% | |
GAAGAGTTGGAAAGAGAGGA+AGG | - | chr8_1:43169422-43169441 | Msa1195300:CDS | 45.0% | |
TGGAAAGAGAGGAAGGGTTA+AGG | - | chr8_1:43169429-43169448 | Msa1195300:CDS | 45.0% | |
! | AGGCTTTAGCTGAGATTAGG+AGG | - | chr8_1:43169516-43169535 | Msa1195300:CDS | 45.0% |
CAAGGAAATTCGACAAGGAC+AGG | - | chr8_1:43169606-43169625 | Msa1195300:CDS | 45.0% | |
TCTTGGGCTTGATCCTTCTA+TGG | - | chr8_1:43169667-43169686 | Msa1195300:CDS | 45.0% | |
AGCAGATCTGCATCTAGGAA+AGG | - | chr8_1:43169707-43169726 | Msa1195300:CDS | 45.0% | |
GATCTGCATCTAGGAAAGGT+CGG | - | chr8_1:43169711-43169730 | Msa1195300:CDS | 45.0% | |
ATCTAGGAAAGGTCGGAAGA+GGG | - | chr8_1:43169718-43169737 | Msa1195300:CDS | 45.0% | |
TCACCAGAAGGAAGAAACGA+TGG | - | chr8_1:43169746-43169765 | Msa1195300:CDS | 45.0% | |
CACCAGAAGGAAGAAACGAT+GGG | - | chr8_1:43169747-43169766 | Msa1195300:CDS | 45.0% | |
ATCCCATCGTTTCTTCCTTC+TGG | + | chr8_1:43169752-43169771 | None:intergenic | 45.0% | |
AGAAGGAAGAAACGATGGGA+TGG | - | chr8_1:43169751-43169770 | Msa1195300:CDS | 45.0% | |
TCTCCAGGAACAACTTCATG+TGG | + | chr8_1:43169854-43169873 | None:intergenic | 45.0% | |
CATGAAGTTGTTCCTGGAGA+AGG | - | chr8_1:43169854-43169873 | Msa1195300:CDS | 45.0% | |
AGAAACAAGAATGCCAAGCG+TGG | - | chr8_1:43169938-43169957 | Msa1195300:CDS | 45.0% | |
!! | TATTCTGGAAAGCGCTCCAA+AGG | - | chr8_1:43170004-43170023 | Msa1195300:CDS | 45.0% |
! | CAACAGTTGGTGTTTGACGT+TGG | + | chr8_1:43168104-43168123 | None:intergenic | 45.0% |
ACACCAACTGTTGTCCACAA+AGG | - | chr8_1:43168111-43168130 | Msa1195300:CDS | 45.0% | |
TAGCCTTTGTGGACAACAGT+TGG | + | chr8_1:43168117-43168136 | None:intergenic | 45.0% | |
ATCGATGAGTTTCCTCGTCT+TGG | - | chr8_1:43168219-43168238 | Msa1195300:CDS | 45.0% | |
TCGATGAGTTTCCTCGTCTT+GGG | - | chr8_1:43168220-43168239 | Msa1195300:CDS | 45.0% | |
GTATCGCTGTAAGTGCTTGA+AGG | - | chr8_1:43168392-43168411 | Msa1195300:CDS | 45.0% | |
TGTACCGTGCTTAAGAGGAT+CGG | - | chr8_1:43168435-43168454 | Msa1195300:CDS | 45.0% | |
TGCTCCAAATACGCCAAACT+CGG | + | chr8_1:43168462-43168481 | None:intergenic | 45.0% | |
GATTTGTGGGTATCCCAATG+TGG | - | chr8_1:43168539-43168558 | Msa1195300:CDS | 45.0% | |
TTTGTGGGTATCCCAATGTG+GGG | - | chr8_1:43168541-43168560 | Msa1195300:CDS | 45.0% | |
TACCACTAAGTCGCTGTTTG+TGG | - | chr8_1:43168623-43168642 | Msa1195300:CDS | 45.0% | |
ACCACTAAGTCGCTGTTTGT+GGG | - | chr8_1:43168624-43168643 | Msa1195300:CDS | 45.0% | |
! | GATTTTGGATAGGCCGTTTG+AGG | - | chr8_1:43168695-43168714 | Msa1195300:CDS | 45.0% |
TGGGTATACTATTGCTCAGC+AGG | - | chr8_1:43168806-43168825 | Msa1195300:CDS | 45.0% | |
!! | CAAGACTGATTTGCAGCCAT+TGG | - | chr8_1:43168890-43168909 | Msa1195300:CDS | 45.0% |
!! | ACTGATTTGCAGCCATTGGA+TGG | - | chr8_1:43168894-43168913 | Msa1195300:CDS | 45.0% |
! | CTGATTTGCAGCCATTGGAT+GGG | - | chr8_1:43168895-43168914 | Msa1195300:CDS | 45.0% |
TCCTCAGATAACCCATCCAA+TGG | + | chr8_1:43168909-43168928 | None:intergenic | 45.0% | |
!! | ATTGGATGGGTTATCTGAGG+AGG | - | chr8_1:43168908-43168927 | Msa1195300:CDS | 45.0% |
TTCAATTGGTCATGGAGGTG+AGG | - | chr8_1:43168974-43168993 | Msa1195300:CDS | 45.0% | |
TCAATTGGTCATGGAGGTGA+GGG | - | chr8_1:43168975-43168994 | Msa1195300:CDS | 45.0% | |
TTCTTCAGTCAACGCACTCA+TGG | + | chr8_1:43169024-43169043 | None:intergenic | 45.0% | |
!! | ATGAGTGCGTTGACTGAAGA+AGG | - | chr8_1:43169023-43169042 | Msa1195300:CDS | 45.0% |
! | GACTGAAGAAGGTGTGATTG+CGG | - | chr8_1:43169034-43169053 | Msa1195300:CDS | 45.0% |
TGAGAGATTGCTGAACCAGA+GGG | - | chr8_1:43169073-43169092 | Msa1195300:CDS | 45.0% | |
AAAACTGCTGGGGGAATACA+CGG | + | chr8_1:43169191-43169210 | None:intergenic | 45.0% | |
TTAGCTTCCAAAACTGCTGG+GGG | + | chr8_1:43169200-43169219 | None:intergenic | 45.0% | |
! | GCTTTAGCTTCCAAAACTGC+TGG | + | chr8_1:43169203-43169222 | None:intergenic | 45.0% |
GATCTGGAGGAAGAAAATGG+AGG | - | chr8_1:43169263-43169282 | Msa1195300:CDS | 45.0% | |
CCACCCTATGTAGAATGTCA+GGG | + | chr8_1:43169403-43169422 | None:intergenic | 45.0% | |
TCCACCCTATGTAGAATGTC+AGG | + | chr8_1:43169404-43169423 | None:intergenic | 45.0% | |
TCTACATAGGGTGGAAGAGT+TGG | - | chr8_1:43169409-43169428 | Msa1195300:CDS | 45.0% | |
GAAGAGTTGGAAAGAGAGGA+AGG | - | chr8_1:43169422-43169441 | Msa1195300:CDS | 45.0% | |
TGGAAAGAGAGGAAGGGTTA+AGG | - | chr8_1:43169429-43169448 | Msa1195300:CDS | 45.0% | |
! | AGGCTTTAGCTGAGATTAGG+AGG | - | chr8_1:43169516-43169535 | Msa1195300:CDS | 45.0% |
CAAGGAAATTCGACAAGGAC+AGG | - | chr8_1:43169606-43169625 | Msa1195300:CDS | 45.0% | |
TCTTGGGCTTGATCCTTCTA+TGG | - | chr8_1:43169667-43169686 | Msa1195300:CDS | 45.0% | |
AGCAGATCTGCATCTAGGAA+AGG | - | chr8_1:43169707-43169726 | Msa1195300:CDS | 45.0% | |
GATCTGCATCTAGGAAAGGT+CGG | - | chr8_1:43169711-43169730 | Msa1195300:CDS | 45.0% | |
ATCTAGGAAAGGTCGGAAGA+GGG | - | chr8_1:43169718-43169737 | Msa1195300:CDS | 45.0% | |
TCACCAGAAGGAAGAAACGA+TGG | - | chr8_1:43169746-43169765 | Msa1195300:CDS | 45.0% | |
CACCAGAAGGAAGAAACGAT+GGG | - | chr8_1:43169747-43169766 | Msa1195300:CDS | 45.0% | |
ATCCCATCGTTTCTTCCTTC+TGG | + | chr8_1:43169752-43169771 | None:intergenic | 45.0% | |
AGAAGGAAGAAACGATGGGA+TGG | - | chr8_1:43169751-43169770 | Msa1195300:CDS | 45.0% | |
TCTCCAGGAACAACTTCATG+TGG | + | chr8_1:43169854-43169873 | None:intergenic | 45.0% | |
CATGAAGTTGTTCCTGGAGA+AGG | - | chr8_1:43169854-43169873 | Msa1195300:CDS | 45.0% | |
AGAAACAAGAATGCCAAGCG+TGG | - | chr8_1:43169938-43169957 | Msa1195300:CDS | 45.0% | |
!! | TATTCTGGAAAGCGCTCCAA+AGG | - | chr8_1:43170004-43170023 | Msa1195300:CDS | 45.0% |
CGATGAGTTTCCTCGTCTTG+GGG | - | chr8_1:43168221-43168240 | Msa1195300:CDS | 50.0% | |
TGCTTGAAGGTTGCTGCTCT+TGG | - | chr8_1:43168405-43168424 | Msa1195300:CDS | 50.0% | |
GCTTGAAGGTTGCTGCTCTT+GGG | - | chr8_1:43168406-43168425 | Msa1195300:CDS | 50.0% | |
GGATGTGTACCGTGCTTAAG+AGG | - | chr8_1:43168430-43168449 | Msa1195300:CDS | 50.0% | |
GTACCGTGCTTAAGAGGATC+GGG | - | chr8_1:43168436-43168455 | Msa1195300:CDS | 50.0% | |
! | GAGTTTGGCGTATTTGGAGC+AGG | - | chr8_1:43168461-43168480 | Msa1195300:CDS | 50.0% |
! | TGGCGTATTTGGAGCAGGTT+AGG | - | chr8_1:43168466-43168485 | Msa1195300:CDS | 50.0% |
AGGTTAGGCAGCATATGGCT+AGG | - | chr8_1:43168481-43168500 | Msa1195300:CDS | 50.0% | |
ACCCACAAACAGCGACTTAG+TGG | + | chr8_1:43168628-43168647 | None:intergenic | 50.0% | |
GTCGCTGTTTGTGGGTCATA+CGG | - | chr8_1:43168632-43168651 | Msa1195300:CDS | 50.0% | |
AACGGCCTATCCAAAATCCC+AGG | + | chr8_1:43168693-43168712 | None:intergenic | 50.0% | |
TGGATAGGCCGTTTGAGGAT+CGG | - | chr8_1:43168700-43168719 | Msa1195300:CDS | 50.0% | |
TGCTCTTGCGCATTTGAGAG+CGG | - | chr8_1:43168749-43168768 | Msa1195300:CDS | 50.0% | |
!! | GCCATTGGATGGGTTATCTG+AGG | - | chr8_1:43168905-43168924 | Msa1195300:CDS | 50.0% |
CAATTGGTCATGGAGGTGAG+GGG | - | chr8_1:43168976-43168995 | Msa1195300:CDS | 50.0% | |
CTGGTTCAGCAATCTCTCAC+AGG | + | chr8_1:43169072-43169091 | None:intergenic | 50.0% | |
GTGAGAGATTGCTGAACCAG+AGG | - | chr8_1:43169072-43169091 | Msa1195300:CDS | 50.0% | |
TCCTTCTGGTCACGTGGTTT+CGG | + | chr8_1:43169161-43169180 | None:intergenic | 50.0% | |
AACCACGTGACCAGAAGGAA+AGG | - | chr8_1:43169162-43169181 | Msa1195300:CDS | 50.0% | |
! | GTGTATTCCCCCAGCAGTTT+TGG | - | chr8_1:43169190-43169209 | Msa1195300:CDS | 50.0% |
CCCTGACATTCTACATAGGG+TGG | - | chr8_1:43169400-43169419 | Msa1195300:CDS | 50.0% | |
GGTGGAAGAGTTGGAAAGAG+AGG | - | chr8_1:43169418-43169437 | Msa1195300:CDS | 50.0% | |
AAGAGAGGAAGGGTTAAGGC+AGG | - | chr8_1:43169433-43169452 | Msa1195300:CDS | 50.0% | |
ATTGACACCGGAACAGCAAG+AGG | - | chr8_1:43169496-43169515 | Msa1195300:CDS | 50.0% | |
!! | GCTAAAGCCTCTTGCTGTTC+CGG | + | chr8_1:43169506-43169525 | None:intergenic | 50.0% |
TGCGTAGCAGATCTGCATCT+AGG | - | chr8_1:43169702-43169721 | Msa1195300:CDS | 50.0% | |
CATCTAGGAAAGGTCGGAAG+AGG | - | chr8_1:43169717-43169736 | Msa1195300:CDS | 50.0% | |
AAGAGGGAGAGATCACCAGA+AGG | - | chr8_1:43169734-43169753 | Msa1195300:CDS | 50.0% | |
!! | CTGAGACGCTGTTTCTTGCT+AGG | + | chr8_1:43169794-43169813 | None:intergenic | 50.0% |
GTAGATCACTGTCTCGTTCC+AGG | - | chr8_1:43169813-43169832 | Msa1195300:CDS | 50.0% | |
ATCACTGTCTCGTTCCAGGT+CGG | - | chr8_1:43169817-43169836 | Msa1195300:CDS | 50.0% | |
CCAGGAACAACTTCATGTGG+TGG | + | chr8_1:43169851-43169870 | None:intergenic | 50.0% | |
CCACCACATGAAGTTGTTCC+TGG | - | chr8_1:43169848-43169867 | Msa1195300:CDS | 50.0% | |
TTGTTCCTGGAGAAGGCCTT+AGG | - | chr8_1:43169861-43169880 | Msa1195300:CDS | 50.0% | |
TGTTCCTGGAGAAGGCCTTA+GGG | - | chr8_1:43169862-43169881 | Msa1195300:CDS | 50.0% | |
TCTATCAGCTTCTCCACGCT+TGG | + | chr8_1:43169954-43169973 | None:intergenic | 50.0% | |
GCTCCAAAGGAAAGACAGAC+AGG | - | chr8_1:43170017-43170036 | Msa1195300:CDS | 50.0% | |
CGATGAGTTTCCTCGTCTTG+GGG | - | chr8_1:43168221-43168240 | Msa1195300:CDS | 50.0% | |
TGCTTGAAGGTTGCTGCTCT+TGG | - | chr8_1:43168405-43168424 | Msa1195300:CDS | 50.0% | |
GCTTGAAGGTTGCTGCTCTT+GGG | - | chr8_1:43168406-43168425 | Msa1195300:CDS | 50.0% | |
GGATGTGTACCGTGCTTAAG+AGG | - | chr8_1:43168430-43168449 | Msa1195300:CDS | 50.0% | |
GTACCGTGCTTAAGAGGATC+GGG | - | chr8_1:43168436-43168455 | Msa1195300:CDS | 50.0% | |
! | GAGTTTGGCGTATTTGGAGC+AGG | - | chr8_1:43168461-43168480 | Msa1195300:CDS | 50.0% |
! | TGGCGTATTTGGAGCAGGTT+AGG | - | chr8_1:43168466-43168485 | Msa1195300:CDS | 50.0% |
AGGTTAGGCAGCATATGGCT+AGG | - | chr8_1:43168481-43168500 | Msa1195300:CDS | 50.0% | |
ACCCACAAACAGCGACTTAG+TGG | + | chr8_1:43168628-43168647 | None:intergenic | 50.0% | |
GTCGCTGTTTGTGGGTCATA+CGG | - | chr8_1:43168632-43168651 | Msa1195300:CDS | 50.0% | |
AACGGCCTATCCAAAATCCC+AGG | + | chr8_1:43168693-43168712 | None:intergenic | 50.0% | |
TGGATAGGCCGTTTGAGGAT+CGG | - | chr8_1:43168700-43168719 | Msa1195300:CDS | 50.0% | |
TGCTCTTGCGCATTTGAGAG+CGG | - | chr8_1:43168749-43168768 | Msa1195300:CDS | 50.0% | |
!! | GCCATTGGATGGGTTATCTG+AGG | - | chr8_1:43168905-43168924 | Msa1195300:CDS | 50.0% |
CAATTGGTCATGGAGGTGAG+GGG | - | chr8_1:43168976-43168995 | Msa1195300:CDS | 50.0% | |
CTGGTTCAGCAATCTCTCAC+AGG | + | chr8_1:43169072-43169091 | None:intergenic | 50.0% | |
GTGAGAGATTGCTGAACCAG+AGG | - | chr8_1:43169072-43169091 | Msa1195300:CDS | 50.0% | |
TCCTTCTGGTCACGTGGTTT+CGG | + | chr8_1:43169161-43169180 | None:intergenic | 50.0% | |
AACCACGTGACCAGAAGGAA+AGG | - | chr8_1:43169162-43169181 | Msa1195300:CDS | 50.0% | |
! | GTGTATTCCCCCAGCAGTTT+TGG | - | chr8_1:43169190-43169209 | Msa1195300:CDS | 50.0% |
CCCTGACATTCTACATAGGG+TGG | - | chr8_1:43169400-43169419 | Msa1195300:CDS | 50.0% | |
GGTGGAAGAGTTGGAAAGAG+AGG | - | chr8_1:43169418-43169437 | Msa1195300:CDS | 50.0% | |
AAGAGAGGAAGGGTTAAGGC+AGG | - | chr8_1:43169433-43169452 | Msa1195300:CDS | 50.0% | |
ATTGACACCGGAACAGCAAG+AGG | - | chr8_1:43169496-43169515 | Msa1195300:CDS | 50.0% | |
!! | GCTAAAGCCTCTTGCTGTTC+CGG | + | chr8_1:43169506-43169525 | None:intergenic | 50.0% |
TGCGTAGCAGATCTGCATCT+AGG | - | chr8_1:43169702-43169721 | Msa1195300:CDS | 50.0% | |
CATCTAGGAAAGGTCGGAAG+AGG | - | chr8_1:43169717-43169736 | Msa1195300:CDS | 50.0% | |
AAGAGGGAGAGATCACCAGA+AGG | - | chr8_1:43169734-43169753 | Msa1195300:CDS | 50.0% | |
!! | CTGAGACGCTGTTTCTTGCT+AGG | + | chr8_1:43169794-43169813 | None:intergenic | 50.0% |
GTAGATCACTGTCTCGTTCC+AGG | - | chr8_1:43169813-43169832 | Msa1195300:CDS | 50.0% | |
ATCACTGTCTCGTTCCAGGT+CGG | - | chr8_1:43169817-43169836 | Msa1195300:CDS | 50.0% | |
CCAGGAACAACTTCATGTGG+TGG | + | chr8_1:43169851-43169870 | None:intergenic | 50.0% | |
CCACCACATGAAGTTGTTCC+TGG | - | chr8_1:43169848-43169867 | Msa1195300:CDS | 50.0% | |
TTGTTCCTGGAGAAGGCCTT+AGG | - | chr8_1:43169861-43169880 | Msa1195300:CDS | 50.0% | |
TGTTCCTGGAGAAGGCCTTA+GGG | - | chr8_1:43169862-43169881 | Msa1195300:CDS | 50.0% | |
TCTATCAGCTTCTCCACGCT+TGG | + | chr8_1:43169954-43169973 | None:intergenic | 50.0% | |
GCTCCAAAGGAAAGACAGAC+AGG | - | chr8_1:43170017-43170036 | Msa1195300:CDS | 50.0% | |
GGATGAATGTCCCCAAGACG+AGG | + | chr8_1:43168234-43168253 | None:intergenic | 55.0% | |
TGAAGGTTGCTGCTCTTGGG+AGG | - | chr8_1:43168409-43168428 | Msa1195300:CDS | 55.0% | |
TAAGAGGATCGGGCCGAGTT+TGG | - | chr8_1:43168446-43168465 | Msa1195300:CDS | 55.0% | |
GGAGCAGGTTAGGCAGCATA+TGG | - | chr8_1:43168476-43168495 | Msa1195300:CDS | 55.0% | |
TCCGAAACCACGTGACCAGA+AGG | - | chr8_1:43169157-43169176 | Msa1195300:CDS | 55.0% | |
TACACGGAGGCCTTTCCTTC+TGG | + | chr8_1:43169175-43169194 | None:intergenic | 55.0% | |
AGCTAAGCAAACAGCCGCTG+AGG | - | chr8_1:43169220-43169239 | Msa1195300:CDS | 55.0% | |
! | GAGGAAGAAAATGGAGGCGC+TGG | - | chr8_1:43169269-43169288 | Msa1195300:CDS | 55.0% |
AGAGCCGACCAACCGTTTCA+AGG | - | chr8_1:43169588-43169607 | Msa1195300:CDS | 55.0% | |
GAAGGCAGCTGTCGTCTCTT+GGG | - | chr8_1:43169651-43169670 | Msa1195300:CDS | 55.0% | |
GAATCCCTAAGGCCTTCTCC+AGG | + | chr8_1:43169869-43169888 | None:intergenic | 55.0% | |
GCGCCTGTCTGTCTTTCCTT+TGG | + | chr8_1:43170023-43170042 | None:intergenic | 55.0% | |
GGATGAATGTCCCCAAGACG+AGG | + | chr8_1:43168234-43168253 | None:intergenic | 55.0% | |
TGAAGGTTGCTGCTCTTGGG+AGG | - | chr8_1:43168409-43168428 | Msa1195300:CDS | 55.0% | |
TAAGAGGATCGGGCCGAGTT+TGG | - | chr8_1:43168446-43168465 | Msa1195300:CDS | 55.0% | |
GGAGCAGGTTAGGCAGCATA+TGG | - | chr8_1:43168476-43168495 | Msa1195300:CDS | 55.0% | |
TCCGAAACCACGTGACCAGA+AGG | - | chr8_1:43169157-43169176 | Msa1195300:CDS | 55.0% | |
TACACGGAGGCCTTTCCTTC+TGG | + | chr8_1:43169175-43169194 | None:intergenic | 55.0% | |
AGCTAAGCAAACAGCCGCTG+AGG | - | chr8_1:43169220-43169239 | Msa1195300:CDS | 55.0% | |
! | GAGGAAGAAAATGGAGGCGC+TGG | - | chr8_1:43169269-43169288 | Msa1195300:CDS | 55.0% |
AGAGCCGACCAACCGTTTCA+AGG | - | chr8_1:43169588-43169607 | Msa1195300:CDS | 55.0% | |
GAAGGCAGCTGTCGTCTCTT+GGG | - | chr8_1:43169651-43169670 | Msa1195300:CDS | 55.0% | |
GAATCCCTAAGGCCTTCTCC+AGG | + | chr8_1:43169869-43169888 | None:intergenic | 55.0% | |
GCGCCTGTCTGTCTTTCCTT+TGG | + | chr8_1:43170023-43170042 | None:intergenic | 55.0% | |
CGGCCCGATCCTCTTAAGCA+CGG | + | chr8_1:43168442-43168461 | None:intergenic | 60.0% | |
CGGGCCGAGTTTGGCGTATT+TGG | - | chr8_1:43168455-43168474 | Msa1195300:CDS | 60.0% | |
TGGTCATGGAGGTGAGGGGA+CGG | - | chr8_1:43168980-43168999 | Msa1195300:CDS | 60.0% | |
GGCCTTTCCTTCTGGTCACG+TGG | + | chr8_1:43169167-43169186 | None:intergenic | 60.0% | |
ACTGCTGGGGGAATACACGG+AGG | + | chr8_1:43169188-43169207 | None:intergenic | 60.0% | |
GGAAGGCAGCTGTCGTCTCT+TGG | - | chr8_1:43169650-43169669 | Msa1195300:CDS | 60.0% | |
CGGCCCGATCCTCTTAAGCA+CGG | + | chr8_1:43168442-43168461 | None:intergenic | 60.0% | |
CGGGCCGAGTTTGGCGTATT+TGG | - | chr8_1:43168455-43168474 | Msa1195300:CDS | 60.0% | |
TGGTCATGGAGGTGAGGGGA+CGG | - | chr8_1:43168980-43168999 | Msa1195300:CDS | 60.0% | |
GGCCTTTCCTTCTGGTCACG+TGG | + | chr8_1:43169167-43169186 | None:intergenic | 60.0% | |
ACTGCTGGGGGAATACACGG+AGG | + | chr8_1:43169188-43169207 | None:intergenic | 60.0% | |
GGAAGGCAGCTGTCGTCTCT+TGG | - | chr8_1:43169650-43169669 | Msa1195300:CDS | 60.0% | |
TGGTGGTCGAGAGACCGACC+TGG | + | chr8_1:43169834-43169853 | None:intergenic | 65.0% | |
TGGTGGTCGAGAGACCGACC+TGG | + | chr8_1:43169834-43169853 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 43168024 | 43170045 | 43168024 | ID=Msa1195300;Name=Msa1195300 |
chr8_1 | mRNA | 43168024 | 43170045 | 43168024 | ID=Msa1195300-mRNA-1;Parent=Msa1195300;Name=Msa1195300-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|-1|0|1|-1|1|1|0|673 |
chr8_1 | exon | 43168024 | 43170045 | 43168024 | ID=Msa1195300-mRNA-1:exon:13969;Parent=Msa1195300-mRNA-1 |
chr8_1 | CDS | 43168024 | 43170045 | 43168024 | ID=Msa1195300-mRNA-1:cds;Parent=Msa1195300-mRNA-1 |
Gene Sequence |
Protein sequence |