Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683780 | XP_024636636.1 | 100.000 | 55 | 0 | 0 | 1 | 55 | 1 | 55 | 3.47e-32 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683780 | sp|P0DO45|ATP6B_ARATH | 81.818 | 55 | 10 | 0 | 1 | 55 | 1 | 55 | 7.07e-29 | 99.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683780 | G7JTP1 | 100.000 | 55 | 0 | 0 | 1 | 55 | 1 | 55 | 1.66e-32 | 115 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa0683780 | 0.852455 | 4.565456e-61 | -8.615850e-47 |
| Msa0007850 | Msa0683780 | 0.835006 | 2.156777e-56 | -8.615850e-47 |
| Msa0008090 | Msa0683780 | 0.839205 | 1.821111e-57 | -8.615850e-47 |
| Msa0027580 | Msa0683780 | 0.809534 | 1.804839e-50 | -8.615850e-47 |
| Msa0031510 | Msa0683780 | 0.828224 | 1.012631e-54 | -8.615850e-47 |
| Msa0033880 | Msa0683780 | 0.835152 | 1.981365e-56 | -8.615850e-47 |
| Msa0042280 | Msa0683780 | 0.801636 | 8.202398e-49 | -8.615850e-47 |
| Msa0043860 | Msa0683780 | 0.830684 | 2.556802e-55 | -8.615850e-47 |
| Msa0045730 | Msa0683780 | 0.815947 | 7.120727e-52 | -8.615850e-47 |
| Msa0048180 | Msa0683780 | 0.822912 | 1.838038e-53 | -8.615850e-47 |
| Msa0052350 | Msa0683780 | -0.802580 | 5.244126e-49 | -8.615850e-47 |
| Msa0052610 | Msa0683780 | 0.802733 | 4.877896e-49 | -8.615850e-47 |
| Msa0053240 | Msa0683780 | 0.821261 | 4.435200e-53 | -8.615850e-47 |
| Msa0055100 | Msa0683780 | 0.826655 | 2.408542e-54 | -8.615850e-47 |
| Msa0055150 | Msa0683780 | 0.810928 | 9.032240e-51 | -8.615850e-47 |
| Msa0056270 | Msa0683780 | 0.817068 | 3.994926e-52 | -8.615850e-47 |
| Msa0057610 | Msa0683780 | 0.845931 | 2.985345e-59 | -8.615850e-47 |
| Msa0061970 | Msa0683780 | 0.819797 | 9.617383e-53 | -8.615850e-47 |
| Msa0068020 | Msa0683780 | 0.844659 | 6.594111e-59 | -8.615850e-47 |
| Msa0070430 | Msa0683780 | 0.804694 | 1.910107e-49 | -8.615850e-47 |
| Msa0073670 | Msa0683780 | 0.803777 | 2.964445e-49 | -8.615850e-47 |
| Msa0075340 | Msa0683780 | 0.810531 | 1.100519e-50 | -8.615850e-47 |
| Msa0077010 | Msa0683780 | 0.854047 | 1.596775e-61 | -8.615850e-47 |
| Msa0082280 | Msa0683780 | 0.823262 | 1.522935e-53 | -8.615850e-47 |
| Msa0097600 | Msa0683780 | 0.804497 | 2.099824e-49 | -8.615850e-47 |
| Msa0098740 | Msa0683780 | 0.833100 | 6.475407e-56 | -8.615850e-47 |
| Msa0101180 | Msa0683780 | 0.833912 | 4.061164e-56 | -8.615850e-47 |
| Msa0103240 | Msa0683780 | 0.826257 | 2.996405e-54 | -8.615850e-47 |
| Msa0108550 | Msa0683780 | 0.804624 | 1.975374e-49 | -8.615850e-47 |
| Msa0108870 | Msa0683780 | 0.814445 | 1.534772e-51 | -8.615850e-47 |
| Msa0111330 | Msa0683780 | 0.812923 | 3.320514e-51 | -8.615850e-47 |
| Msa0113130 | Msa0683780 | 0.820012 | 8.586357e-53 | -8.615850e-47 |
| Msa0113240 | Msa0683780 | 0.850715 | 1.419104e-60 | -8.615850e-47 |
| Msa0115370 | Msa0683780 | 0.854909 | 8.988328e-62 | -8.615850e-47 |
| Msa0116130 | Msa0683780 | 0.813817 | 2.112347e-51 | -8.615850e-47 |
| Msa0603570 | Msa0683780 | 0.810942 | 8.970064e-51 | -8.615850e-47 |
| Msa0604960 | Msa0683780 | 0.813607 | 2.350031e-51 | -8.615850e-47 |
| Msa0607510 | Msa0683780 | 0.803398 | 3.553979e-49 | -8.615850e-47 |
| Msa0609000 | Msa0683780 | 0.829980 | 3.800037e-55 | -8.615850e-47 |
| Msa0610390 | Msa0683780 | 0.832319 | 1.011944e-55 | -8.615850e-47 |
| Msa0615580 | Msa0683780 | 0.829468 | 5.061135e-55 | -8.615850e-47 |
| Msa0615680 | Msa0683780 | 0.805979 | 1.027848e-49 | -8.615850e-47 |
| Msa0616340 | Msa0683780 | 0.801399 | 9.172188e-49 | -8.615850e-47 |
| Msa0618930 | Msa0683780 | 0.836806 | 7.539942e-57 | -8.615850e-47 |
| Msa0619860 | Msa0683780 | 0.850161 | 2.030483e-60 | -8.615850e-47 |
| Msa0619920 | Msa0683780 | 0.811930 | 5.471024e-51 | -8.615850e-47 |
| Msa0623200 | Msa0683780 | 0.816263 | 6.052100e-52 | -8.615850e-47 |
| Msa0631250 | Msa0683780 | 0.811661 | 6.262263e-51 | -8.615850e-47 |
| Msa0633570 | Msa0683780 | 0.874063 | 9.047730e-68 | -8.615850e-47 |
| Msa0644030 | Msa0683780 | 0.814675 | 1.365579e-51 | -8.615850e-47 |
| Msa0647490 | Msa0683780 | 0.807653 | 4.549967e-50 | -8.615850e-47 |
| Msa0650920 | Msa0683780 | 0.815916 | 7.234339e-52 | -8.615850e-47 |
| Msa0654870 | Msa0683780 | 0.848098 | 7.607392e-60 | -8.615850e-47 |
| Msa0659030 | Msa0683780 | 0.853145 | 2.899944e-61 | -8.615850e-47 |
| Msa0659990 | Msa0683780 | 0.857121 | 2.025188e-62 | -8.615850e-47 |
| Msa0666230 | Msa0683780 | 0.854846 | 9.374539e-62 | -8.615850e-47 |
| Msa0669720 | Msa0683780 | 0.818491 | 1.906524e-52 | -8.615850e-47 |
| Msa0669760 | Msa0683780 | 0.840496 | 8.398425e-58 | -8.615850e-47 |
| Msa0672100 | Msa0683780 | 0.811206 | 7.860980e-51 | -8.615850e-47 |
| Msa0683780 | Msa0684160 | 0.809956 | 1.464555e-50 | -8.615850e-47 |
| Msa0683780 | Msa0687230 | 0.808678 | 2.751817e-50 | -8.615850e-47 |
| Msa0683780 | Msa0687630 | 0.865652 | 5.053979e-65 | -8.615850e-47 |
| Msa0683780 | Msa0689500 | 0.823565 | 1.293399e-53 | -8.615850e-47 |
| Msa0683780 | Msa0692940 | 0.807366 | 5.235319e-50 | -8.615850e-47 |
| Msa0683780 | Msa0693210 | 0.822036 | 2.935973e-53 | -8.615850e-47 |
| Msa0683780 | Msa0699190 | 0.860543 | 1.920060e-63 | -8.615850e-47 |
| Msa0683780 | Msa0704660 | 0.843477 | 1.367809e-58 | -8.615850e-47 |
| Msa0683780 | Msa0704800 | 0.804346 | 2.257783e-49 | -8.615850e-47 |
| Msa0683780 | Msa0705000 | 0.873918 | 1.012747e-67 | -8.615850e-47 |
| Msa0683780 | Msa0705040 | 0.878255 | 3.257070e-69 | -8.615850e-47 |
| Msa0683780 | Msa0705090 | 0.815690 | 8.124920e-52 | -8.615850e-47 |
| Msa0683780 | Msa0707390 | 0.831160 | 1.954147e-55 | -8.615850e-47 |
| Msa0683780 | Msa0709780 | 0.815908 | 7.265017e-52 | -8.615850e-47 |
| Msa0683780 | Msa0720030 | 0.808239 | 3.415633e-50 | -8.615850e-47 |
| Msa0683780 | Msa0738100 | 0.804263 | 2.349607e-49 | -8.615850e-47 |
| Msa0683780 | Msa0750920 | 0.823174 | 1.596848e-53 | -8.615850e-47 |
| Msa0683780 | Msa0769590 | 0.803600 | 3.226098e-49 | -8.615850e-47 |
| Msa0683780 | Msa0785130 | 0.842976 | 1.860726e-58 | -8.615850e-47 |
| Msa0683780 | Msa0806880 | 0.806487 | 8.032561e-50 | -8.615850e-47 |
| Msa0683780 | Msa0808800 | 0.813571 | 2.392391e-51 | -8.615850e-47 |
| Msa0683780 | Msa0817540 | 0.802353 | 5.839737e-49 | -8.615850e-47 |
| Msa0683780 | Msa0818770 | 0.805187 | 1.506553e-49 | -8.615850e-47 |
| Msa0683780 | Msa0819540 | 0.829839 | 4.113042e-55 | -8.615850e-47 |
| Msa0683780 | Msa0822170 | 0.832690 | 8.186231e-56 | -8.615850e-47 |
| Msa0683780 | Msa0822180 | 0.812569 | 3.969257e-51 | -8.615850e-47 |
| Msa0683780 | Msa0824640 | 0.839528 | 1.501569e-57 | -8.615850e-47 |
| Msa0683780 | Msa0825270 | 0.801716 | 7.895948e-49 | -8.615850e-47 |
| Msa0683780 | Msa0858440 | 0.837063 | 6.483838e-57 | -8.615850e-47 |
| Msa0683780 | Msa0864010 | 0.831135 | 1.981455e-55 | -8.615850e-47 |
| Msa0683780 | Msa0872670 | 0.815997 | 6.940403e-52 | -8.615850e-47 |
| Msa0683780 | Msa0906000 | 0.822458 | 2.343110e-53 | -8.615850e-47 |
| Msa0683780 | Msa0913240 | 0.812835 | 3.471796e-51 | -8.615850e-47 |
| Msa0683780 | Msa0921870 | 0.811014 | 8.653959e-51 | -8.615850e-47 |
| Msa0683780 | Msa0943170 | 0.866538 | 2.650392e-65 | -8.615850e-47 |
| Msa0683780 | Msa0945480 | 0.816224 | 6.174976e-52 | -8.615850e-47 |
| Msa0683780 | Msa0960830 | 0.854987 | 8.531214e-62 | -8.615850e-47 |
| Msa0683780 | Msa0963020 | 0.871687 | 5.653033e-67 | -8.615850e-47 |
| Msa0683780 | Msa0966270 | 0.840073 | 1.083033e-57 | -8.615850e-47 |
| Msa0683780 | Msa0973320 | 0.813769 | 2.164251e-51 | -8.615850e-47 |
| Msa0683780 | Msa0980940 | 0.805860 | 1.088713e-49 | -8.615850e-47 |
| Msa0683780 | Msa0994290 | 0.845990 | 2.876278e-59 | -8.615850e-47 |
| Msa0683780 | Msa1003440 | 0.807373 | 5.218214e-50 | -8.615850e-47 |
| Msa0683780 | Msa1019240 | 0.843347 | 1.481358e-58 | -8.615850e-47 |
| Msa0683780 | Msa1019260 | 0.834497 | 2.896218e-56 | -8.615850e-47 |
| Msa0683780 | Msa1025940 | 0.872343 | 3.421895e-67 | -8.615850e-47 |
| Msa0683780 | Msa1030930 | 0.837845 | 4.085792e-57 | -8.615850e-47 |
| Msa0683780 | Msa1039900 | 0.803191 | 3.921796e-49 | -8.615850e-47 |
| Msa0683780 | Msa1040580 | 0.825935 | 3.572413e-54 | -8.615850e-47 |
| Msa0683780 | Msa1044430 | 0.830678 | 2.565799e-55 | -8.615850e-47 |
| Msa0683780 | Msa1070050 | 0.835155 | 1.978681e-56 | -8.615850e-47 |
| Msa0683780 | Msa1070390 | 0.827797 | 1.282837e-54 | -8.615850e-47 |
| Msa0683780 | Msa1073400 | 0.819541 | 1.100109e-52 | -8.615850e-47 |
| Msa0683780 | Msa1083880 | 0.842207 | 2.977762e-58 | -8.615850e-47 |
| Msa0683780 | Msa1085470 | 0.834906 | 2.285423e-56 | -8.615850e-47 |
| Msa0683780 | Msa1093330 | 0.802447 | 5.587134e-49 | -8.615850e-47 |
| Msa0683780 | Msa1104210 | 0.833815 | 4.294447e-56 | -8.615850e-47 |
| Msa0683780 | Msa1123350 | 0.826842 | 2.172444e-54 | -8.615850e-47 |
| Msa0683780 | Msa1125500 | 0.859019 | 5.525667e-63 | -8.615850e-47 |
| Msa0683780 | Msa1125580 | 0.825026 | 5.865721e-54 | -8.615850e-47 |
| Msa0683780 | Msa1126510 | 0.808720 | 2.696077e-50 | -8.615850e-47 |
| Msa0683780 | Msa1126770 | 0.831278 | 1.827233e-55 | -8.615850e-47 |
| Msa0683780 | Msa1131560 | 0.875485 | 2.969131e-68 | -8.615850e-47 |
| Msa0683780 | Msa1135810 | -0.824857 | 6.429158e-54 | -8.615850e-47 |
| Msa0683780 | Msa1145240 | 0.832553 | 8.854003e-56 | -8.615850e-47 |
| Msa0683780 | Msa1165780 | 0.821891 | 3.171759e-53 | -8.615850e-47 |
| Msa0683780 | Msa1166860 | 0.810348 | 1.205089e-50 | -8.615850e-47 |
| Msa0683780 | Msa1166870 | 0.876314 | 1.541367e-68 | -8.615850e-47 |
| Msa0683780 | Msa1173900 | 0.811909 | 5.528568e-51 | -8.615850e-47 |
| Msa0683780 | Msa1174100 | 0.809169 | 2.160784e-50 | -8.615850e-47 |
| Msa0683780 | Msa1179950 | 0.846097 | 2.690814e-59 | -8.615850e-47 |
| Msa0683780 | Msa1179980 | 0.865634 | 5.120453e-65 | -8.615850e-47 |
| Msa0683780 | Msa1184370 | 0.890071 | 1.371847e-73 | -8.615850e-47 |
| Msa0683780 | Msa1192850 | 0.814184 | 1.752859e-51 | -8.615850e-47 |
| Msa0683780 | Msa1201830 | 0.859532 | 3.876043e-63 | -8.615850e-47 |
| Msa0683780 | Msa1202580 | 0.810544 | 1.093348e-50 | -8.615850e-47 |
| Msa0683780 | Msa1205850 | 0.818775 | 1.643358e-52 | -8.615850e-47 |
| Msa0683780 | Msa1206090 | 0.806478 | 8.067030e-50 | -8.615850e-47 |
| Msa0683780 | Msa1206650 | 0.811943 | 5.436571e-51 | -8.615850e-47 |
| Msa0683780 | Msa1207730 | 0.822489 | 2.304735e-53 | -8.615850e-47 |
| Msa0683780 | Msa1208020 | 0.845476 | 3.965440e-59 | -8.615850e-47 |
| Msa0683780 | Msa1211830 | 0.809914 | 1.495088e-50 | -8.615850e-47 |
| Msa0683780 | Msa1223330 | 0.802804 | 4.714246e-49 | -8.615850e-47 |
| Msa0683780 | Msa1225660 | 0.835433 | 1.682830e-56 | -8.615850e-47 |
| Msa0683780 | Msa1227690 | 0.902832 | 6.477305e-79 | -8.615850e-47 |
| Msa0683780 | Msa1234980 | 0.867396 | 1.412006e-65 | -8.615850e-47 |
| Msa0683780 | Msa1235250 | 0.802788 | 4.751085e-49 | -8.615850e-47 |
| Msa0683780 | Msa1254710 | 0.807893 | 4.046437e-50 | -8.615850e-47 |
| Msa0683780 | Msa1256770 | 0.846433 | 2.178820e-59 | -8.615850e-47 |
| Msa0683780 | Msa1270620 | 0.866465 | 2.795849e-65 | -8.615850e-47 |
| Msa0683780 | Msa1270690 | 0.864980 | 8.226895e-65 | -8.615850e-47 |
| Msa0683780 | Msa1271580 | 0.814422 | 1.553587e-51 | -8.615850e-47 |
| Msa0683780 | Msa1276930 | 0.826386 | 2.791503e-54 | -8.615850e-47 |
| Msa0683780 | Msa1294840 | 0.873474 | 1.429743e-67 | -8.615850e-47 |
| Msa0683780 | Msa1295110 | 0.815530 | 8.820292e-52 | -8.615850e-47 |
| Msa0683780 | Msa1296830 | 0.803924 | 2.763584e-49 | -8.615850e-47 |
| Msa0683780 | Msa1298050 | 0.816088 | 6.622316e-52 | -8.615850e-47 |
| Msa0683780 | Msa1299700 | 0.811536 | 6.665577e-51 | -8.615850e-47 |
| Msa0683780 | Msa1306990 | 0.862392 | 5.236478e-64 | -8.615850e-47 |
| Msa0683780 | Msa1307950 | 0.831017 | 2.117912e-55 | -8.615850e-47 |
| Msa0683780 | Msa1310690 | 0.885583 | 7.172726e-72 | -8.615850e-47 |
| Msa0683780 | Msa1327490 | 0.806409 | 8.343520e-50 | -8.615850e-47 |
| Msa0683780 | Msa1329450 | 0.804324 | 2.282153e-49 | -8.615850e-47 |
| Msa0683780 | Msa1329540 | 0.834956 | 2.220754e-56 | -8.615850e-47 |
| Msa0683780 | Msa1331250 | 0.848512 | 5.846379e-60 | -8.615850e-47 |
| Msa0683780 | Msa1333560 | 0.808175 | 3.524187e-50 | -8.615850e-47 |
| Msa0683780 | Msa1333970 | 0.807265 | 5.499200e-50 | -8.615850e-47 |
| Msa0683780 | Msa1343290 | 0.800426 | 1.449034e-48 | -8.615850e-47 |
| Msa0683780 | Msa1345450 | 0.845626 | 3.612585e-59 | -8.615850e-47 |
| Msa0683780 | Msa1349570 | 0.823728 | 1.184949e-53 | -8.615850e-47 |
| Msa0683780 | Msa1358430 | 0.825825 | 3.795574e-54 | -8.615850e-47 |
| Msa0683780 | Msa1362420 | 0.812848 | 3.447624e-51 | -8.615850e-47 |
| Msa0683780 | Msa1363330 | 0.815238 | 1.024306e-51 | -8.615850e-47 |
| Msa0683780 | Msa1363860 | 0.813215 | 2.865210e-51 | -8.615850e-47 |
| Msa0683780 | Msa1365860 | 0.804008 | 2.654188e-49 | -8.615850e-47 |
| Msa0683780 | Msa1369190 | 0.871297 | 7.606394e-67 | -8.615850e-47 |
| Msa0683780 | Msa1370860 | 0.846427 | 2.187216e-59 | -8.615850e-47 |
| Msa0683780 | Msa1380970 | 0.817430 | 3.310452e-52 | -8.615850e-47 |
| Msa0683780 | Msa1381120 | 0.808322 | 3.278567e-50 | -8.615850e-47 |
| Msa0683780 | Msa1386600 | 0.814609 | 1.411944e-51 | -8.615850e-47 |
| Msa0683780 | Msa1389680 | 0.825135 | 5.529338e-54 | -8.615850e-47 |
| Msa0683780 | Msa1397940 | 0.806493 | 8.007451e-50 | -8.615850e-47 |
| Msa0683780 | Msa1404190 | 0.850437 | 1.699179e-60 | -8.615850e-47 |
| Msa0683780 | Msa1413180 | 0.848451 | 6.079304e-60 | -8.615850e-47 |
| Msa0683780 | Msa1413500 | 0.802050 | 6.742973e-49 | -8.615850e-47 |
| Msa0683780 | Msa1420660 | 0.807041 | 6.134403e-50 | -8.615850e-47 |
| Msa0683780 | Msa1428810 | 0.826807 | 2.214994e-54 | -8.615850e-47 |
| Msa0683780 | Msa1429500 | 0.852787 | 3.670278e-61 | -8.615850e-47 |
| Msa0683780 | Msa1432480 | 0.825423 | 4.726243e-54 | -8.615850e-47 |
| Msa0683780 | Msa1435440 | 0.813981 | 1.943910e-51 | -8.615850e-47 |
| Msa0683780 | Msa1438640 | 0.839604 | 1.434416e-57 | -8.615850e-47 |
| Msa0683780 | Msa1442850 | 0.881871 | 1.673202e-70 | -8.615850e-47 |
| Msa0683780 | Msa1443930 | 0.802651 | 5.071373e-49 | -8.615850e-47 |
| Msa0683780 | Msa1450280 | 0.841472 | 4.655749e-58 | -8.615850e-47 |
| Msa0683780 | Msa1457400 | 0.809909 | 1.498825e-50 | -8.615850e-47 |
| Msa0683780 | Msa1459960 | 0.819636 | 1.046428e-52 | -8.615850e-47 |
| Msa0683780 | Msa1462860 | 0.879770 | 9.501480e-70 | -8.615850e-47 |
| Msa0683780 | Msa1465080 | 0.853534 | 2.242667e-61 | -8.615850e-47 |
| Msa0121820 | Msa0683780 | 0.825388 | 4.817968e-54 | -8.615850e-47 |
| Msa0123010 | Msa0683780 | 0.801828 | 7.488511e-49 | -8.615850e-47 |
| Msa0123510 | Msa0683780 | 0.813064 | 3.092555e-51 | -8.615850e-47 |
| Msa0126520 | Msa0683780 | 0.807088 | 5.994592e-50 | -8.615850e-47 |
| Msa0126770 | Msa0683780 | 0.812768 | 3.590629e-51 | -8.615850e-47 |
| Msa0126840 | Msa0683780 | 0.823283 | 1.505501e-53 | -8.615850e-47 |
| Msa0126880 | Msa0683780 | 0.801681 | 8.028603e-49 | -8.615850e-47 |
| Msa0127850 | Msa0683780 | 0.835033 | 2.123921e-56 | -8.615850e-47 |
| Msa0147750 | Msa0683780 | 0.804363 | 2.239434e-49 | -8.615850e-47 |
| Msa0147980 | Msa0683780 | 0.802697 | 4.960329e-49 | -8.615850e-47 |
| Msa0149390 | Msa0683780 | 0.802958 | 4.381985e-49 | -8.615850e-47 |
| Msa0155430 | Msa0683780 | 0.844922 | 5.600063e-59 | -8.615850e-47 |
| Msa0165950 | Msa0683780 | 0.829102 | 6.210646e-55 | -8.615850e-47 |
| Msa0166750 | Msa0683780 | 0.879961 | 8.122234e-70 | -8.615850e-47 |
| Msa0167480 | Msa0683780 | 0.859647 | 3.578011e-63 | -8.615850e-47 |
| Msa0171850 | Msa0683780 | 0.824407 | 8.210386e-54 | -8.615850e-47 |
| Msa0174000 | Msa0683780 | 0.826763 | 2.269341e-54 | -8.615850e-47 |
| Msa0174770 | Msa0683780 | 0.848091 | 7.645489e-60 | -8.615850e-47 |
| Msa0177360 | Msa0683780 | 0.807530 | 4.832347e-50 | -8.615850e-47 |
| Msa0177960 | Msa0683780 | 0.811974 | 5.351373e-51 | -8.615850e-47 |
| Msa0178120 | Msa0683780 | 0.805297 | 1.429021e-49 | -8.615850e-47 |
| Msa0180020 | Msa0683780 | 0.807310 | 5.381173e-50 | -8.615850e-47 |
| Msa0181610 | Msa0683780 | 0.832731 | 7.995023e-56 | -8.615850e-47 |
| Msa0183460 | Msa0683780 | 0.805041 | 1.616428e-49 | -8.615850e-47 |
| Msa0185400 | Msa0683780 | 0.814133 | 1.799627e-51 | -8.615850e-47 |
| Msa0187930 | Msa0683780 | 0.802393 | 5.732140e-49 | -8.615850e-47 |
| Msa0194540 | Msa0683780 | 0.805678 | 1.189019e-49 | -8.615850e-47 |
| Msa0199690 | Msa0683780 | 0.816978 | 4.184855e-52 | -8.615850e-47 |
| Msa0211840 | Msa0683780 | 0.810529 | 1.101899e-50 | -8.615850e-47 |
| Msa0221030 | Msa0683780 | 0.815236 | 1.024966e-51 | -8.615850e-47 |
| Msa0221600 | Msa0683780 | 0.822912 | 1.837836e-53 | -8.615850e-47 |
| Msa0224560 | Msa0683780 | 0.825521 | 4.479726e-54 | -8.615850e-47 |
| Msa0226460 | Msa0683780 | 0.834566 | 2.782787e-56 | -8.615850e-47 |
| Msa0230520 | Msa0683780 | 0.812928 | 3.311925e-51 | -8.615850e-47 |
| Msa0231100 | Msa0683780 | 0.831580 | 1.539785e-55 | -8.615850e-47 |
| Msa0231710 | Msa0683780 | 0.803139 | 4.019478e-49 | -8.615850e-47 |
| Msa0370160 | Msa0683780 | -0.812675 | 3.763298e-51 | -8.615850e-47 |
| Msa0376690 | Msa0683780 | 0.822152 | 2.759889e-53 | -8.615850e-47 |
| Msa0376820 | Msa0683780 | 0.826930 | 2.069570e-54 | -8.615850e-47 |
| Msa0384670 | Msa0683780 | 0.803629 | 3.181766e-49 | -8.615850e-47 |
| Msa0384880 | Msa0683780 | 0.837840 | 4.099381e-57 | -8.615850e-47 |
| Msa0389510 | Msa0683780 | 0.822993 | 1.759035e-53 | -8.615850e-47 |
| Msa0392940 | Msa0683780 | 0.822595 | 2.177414e-53 | -8.615850e-47 |
| Msa0394400 | Msa0683780 | 0.829799 | 4.204192e-55 | -8.615850e-47 |
| Msa0403190 | Msa0683780 | 0.803667 | 3.124845e-49 | -8.615850e-47 |
| Msa0405650 | Msa0683780 | 0.803282 | 3.755966e-49 | -8.615850e-47 |
| Msa0408240 | Msa0683780 | -0.841410 | 4.831810e-58 | -8.615850e-47 |
| Msa0416400 | Msa0683780 | 0.845933 | 2.980643e-59 | -8.615850e-47 |
| Msa0419520 | Msa0683780 | 0.811862 | 5.660832e-51 | -8.615850e-47 |
| Msa0423750 | Msa0683780 | 0.852554 | 4.277583e-61 | -8.615850e-47 |
| Msa0427860 | Msa0683780 | -0.832012 | 1.204691e-55 | -8.615850e-47 |
| Msa0437690 | Msa0683780 | -0.821189 | 4.609460e-53 | -8.615850e-47 |
| Msa0443390 | Msa0683780 | 0.847349 | 1.223528e-59 | -8.615850e-47 |
| Msa0465550 | Msa0683780 | 0.812126 | 4.960440e-51 | -8.615850e-47 |
| Msa0471590 | Msa0683780 | 0.813576 | 2.386294e-51 | -8.615850e-47 |
| Msa0472130 | Msa0683780 | 0.832031 | 1.191812e-55 | -8.615850e-47 |
| Msa0474090 | Msa0683780 | -0.818691 | 1.717468e-52 | -8.615850e-47 |
| Msa0478580 | Msa0683780 | 0.815492 | 8.990742e-52 | -8.615850e-47 |
| Msa0479330 | Msa0683780 | 0.801196 | 1.009213e-48 | -8.615850e-47 |
| Msa0481480 | Msa0683780 | 0.819335 | 1.226115e-52 | -8.615850e-47 |
| Msa0245060 | Msa0683780 | 0.835585 | 1.539975e-56 | -8.615850e-47 |
| Msa0245580 | Msa0683780 | 0.818452 | 1.946074e-52 | -8.615850e-47 |
| Msa0262480 | Msa0683780 | 0.831618 | 1.507128e-55 | -8.615850e-47 |
| Msa0280430 | Msa0683780 | 0.848985 | 4.323044e-60 | -8.615850e-47 |
| Msa0291520 | Msa0683780 | 0.871367 | 7.215772e-67 | -8.615850e-47 |
| Msa0296250 | Msa0683780 | 0.833656 | 4.705073e-56 | -8.615850e-47 |
| Msa0296920 | Msa0683780 | 0.800632 | 1.315941e-48 | -8.615850e-47 |
| Msa0300350 | Msa0683780 | 0.830612 | 2.662708e-55 | -8.615850e-47 |
| Msa0304590 | Msa0683780 | 0.852433 | 4.630855e-61 | -8.615850e-47 |
| Msa0304660 | Msa0683780 | 0.856034 | 4.225673e-62 | -8.615850e-47 |
| Msa0310080 | Msa0683780 | 0.822517 | 2.270362e-53 | -8.615850e-47 |
| Msa0331700 | Msa0683780 | 0.859702 | 3.446224e-63 | -8.615850e-47 |
| Msa0348830 | Msa0683780 | 0.843834 | 1.098251e-58 | -8.615850e-47 |
| Msa0359040 | Msa0683780 | 0.815605 | 8.484319e-52 | -8.615850e-47 |
| Msa0359600 | Msa0683780 | 0.818071 | 2.372774e-52 | -8.615850e-47 |
| Msa0363620 | Msa0683780 | 0.800602 | 1.334752e-48 | -8.615850e-47 |
| Msa0484290 | Msa0683780 | 0.818335 | 2.068684e-52 | -8.615850e-47 |
| Msa0484740 | Msa0683780 | 0.807862 | 4.107511e-50 | -8.615850e-47 |
| Msa0490820 | Msa0683780 | 0.864842 | 9.091599e-65 | -8.615850e-47 |
| Msa0491920 | Msa0683780 | 0.805764 | 1.140119e-49 | -8.615850e-47 |
| Msa0498560 | Msa0683780 | 0.813539 | 2.432177e-51 | -8.615850e-47 |
| Msa0505150 | Msa0683780 | 0.809321 | 2.004375e-50 | -8.615850e-47 |
| Msa0509120 | Msa0683780 | 0.827306 | 1.682889e-54 | -8.615850e-47 |
| Msa0509950 | Msa0683780 | -0.814265 | 1.682099e-51 | -8.615850e-47 |
| Msa0511770 | Msa0683780 | 0.809721 | 1.645010e-50 | -8.615850e-47 |
| Msa0523810 | Msa0683780 | 0.810346 | 1.206617e-50 | -8.615850e-47 |
| Msa0526540 | Msa0683780 | 0.823900 | 1.079606e-53 | -8.615850e-47 |
| Msa0527150 | Msa0683780 | 0.812771 | 3.584779e-51 | -8.615850e-47 |
| Msa0531650 | Msa0683780 | 0.800531 | 1.379681e-48 | -8.615850e-47 |
| Msa0534750 | Msa0683780 | 0.886100 | 4.588298e-72 | -8.615850e-47 |
| Msa0547990 | Msa0683780 | 0.818574 | 1.825840e-52 | -8.615850e-47 |
| Msa0550570 | Msa0683780 | 0.817807 | 2.723269e-52 | -8.615850e-47 |
| Msa0552810 | Msa0683780 | 0.818001 | 2.461973e-52 | -8.615850e-47 |
| Msa0561430 | Msa0683780 | 0.838317 | 3.090409e-57 | -8.615850e-47 |
| Msa0576940 | Msa0683780 | 0.819143 | 1.355585e-52 | -8.615850e-47 |
| Msa0579770 | Msa0683780 | 0.808442 | 3.091543e-50 | -8.615850e-47 |
| Msa0580230 | Msa0683780 | 0.825912 | 3.619471e-54 | -8.615850e-47 |
| Msa0581070 | Msa0683780 | 0.840317 | 9.349336e-58 | -8.615850e-47 |
| Msa0582050 | Msa0683780 | 0.827731 | 1.330337e-54 | -8.615850e-47 |
| Msa0590940 | Msa0683780 | 0.832791 | 7.728038e-56 | -8.615850e-47 |
| Msa0593700 | Msa0683780 | 0.867634 | 1.184676e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683780 | MtrunA17_Chr4g0030851 | 100.000 | 55 | 0 | 0 | 1 | 55 | 1 | 55 | 3.19e-36 | 115 |
| Msa0683780 | MtrunA17_Chr2g0327811 | 89.091 | 55 | 6 | 0 | 1 | 55 | 1 | 55 | 7.42e-32 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0683780 | AT3G46430.1 | 81.818 | 55 | 10 | 0 | 1 | 55 | 1 | 55 | 7.19e-30 | 99.4 |
| Msa0683780 | AT5G59613.1 | 81.818 | 55 | 10 | 0 | 1 | 55 | 1 | 55 | 7.19e-30 | 99.4 |
| Msa0683780 | AT5G59613.2 | 81.818 | 55 | 10 | 0 | 1 | 55 | 1 | 55 | 7.19e-30 | 99.4 |
Find 16 sgRNAs with CRISPR-Local
Find 26 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCTCTCTTGAAGAAAAC+TGG | 0.292105 | 4_4:-46697192 | None:intergenic |
| TTTGTGATGCTGAACGAATT+TGG | 0.293620 | 4_4:-46697414 | None:intergenic |
| GGTAAGACCAAGAGAGAATT+TGG | 0.344448 | 4_4:-46697268 | None:intergenic |
| AAATTCTCTCTTGGTCTTAC+CGG | 0.353041 | 4_4:+46697270 | Msa0683780:CDS |
| CTTGTCACCAAATTCTCTCT+TGG | 0.398915 | 4_4:+46697261 | Msa0683780:CDS |
| CTCGTTGGATTCGCCGTCAC+CGG | 0.441426 | 4_4:+46697234 | Msa0683780:CDS |
| AGAGAGAATGGAAACGTACT+TGG | 0.486234 | 4_4:+46697205 | Msa0683780:CDS |
| CTCTTGAAGAAAACTGGCCA+TGG | 0.493329 | 4_4:-46697186 | None:intergenic |
| TCTTCGTCACACCAAAGTTA+CGG | 0.513023 | 4_4:-46697079 | None:intergenic |
| AATTCGTTCAGCATCACAAA+AGG | 0.536789 | 4_4:+46697417 | Msa0683780:CDS |
| ACGGCGAATCCAACGAGGAA+TGG | 0.540309 | 4_4:-46697228 | None:intergenic |
| GAATTTGGTGACAAGAGCTC+CGG | 0.557010 | 4_4:-46697253 | None:intergenic |
| CGTACTTGGCCATTCCTCGT+TGG | 0.562709 | 4_4:+46697219 | Msa0683780:CDS |
| AAATGAGACAGTTCGATCCA+TGG | 0.569004 | 4_4:+46697169 | Msa0683780:exon |
| GGTGACAAGAGCTCCGGTGA+CGG | 0.581739 | 4_4:-46697247 | None:intergenic |
| CGGTGACGGCGAATCCAACG+AGG | 0.732353 | 4_4:-46697233 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCCTTTTTTATTGAACAATT+AGG | + | chr4_4:46697318-46697337 | Msa0683780:intron | 20.0% |
| !!! | CCTTTTTTATTGAACAATTA+GGG | + | chr4_4:46697319-46697338 | Msa0683780:intron | 20.0% |
| !! | TACGGTTTTTGTTACAAAAA+TGG | - | chr4_4:46697064-46697083 | None:intergenic | 25.0% |
| ! | AGAGAAATAGATTGAAATAC+CGG | - | chr4_4:46697292-46697311 | None:intergenic | 25.0% |
| ! | CCCTAATTGTTCAATAAAAA+AGG | - | chr4_4:46697322-46697341 | None:intergenic | 25.0% |
| ! | CTGCAACAAAAATAAAATCA+AGG | - | chr4_4:46697376-46697395 | None:intergenic | 25.0% |
| !!! | TGATTTTATTTTTGTTGCAG+AGG | + | chr4_4:46697376-46697395 | Msa0683780:intron | 25.0% |
| CAAAAATGGTAGAGTTTAGA+TGG | - | chr4_4:46697050-46697069 | None:intergenic | 30.0% | |
| TGTAACAAAAACCGTAACTT+TGG | + | chr4_4:46697068-46697087 | Msa0683780:five_prime_UTR | 30.0% | |
| CATTCTCTCTTGAAGAAAAC+TGG | - | chr4_4:46697195-46697214 | None:intergenic | 35.0% | |
| ! | CAGTTTTCTTCAAGAGAGAA+TGG | + | chr4_4:46697193-46697212 | Msa0683780:CDS | 35.0% |
| !! | AAATTCTCTCTTGGTCTTAC+CGG | + | chr4_4:46697270-46697289 | Msa0683780:CDS | 35.0% |
| TTTGTGATGCTGAACGAATT+TGG | - | chr4_4:46697417-46697436 | None:intergenic | 35.0% | |
| AATTCGTTCAGCATCACAAA+AGG | + | chr4_4:46697417-46697436 | Msa0683780:CDS | 35.0% | |
| TCTTCGTCACACCAAAGTTA+CGG | - | chr4_4:46697082-46697101 | None:intergenic | 40.0% | |
| AAATGAGACAGTTCGATCCA+TGG | + | chr4_4:46697169-46697188 | Msa0683780:exon | 40.0% | |
| AGAGAGAATGGAAACGTACT+TGG | + | chr4_4:46697205-46697224 | Msa0683780:CDS | 40.0% | |
| CTTGTCACCAAATTCTCTCT+TGG | + | chr4_4:46697261-46697280 | Msa0683780:CDS | 40.0% | |
| GGTAAGACCAAGAGAGAATT+TGG | - | chr4_4:46697271-46697290 | None:intergenic | 40.0% | |
| CTCTTGAAGAAAACTGGCCA+TGG | - | chr4_4:46697189-46697208 | None:intergenic | 45.0% | |
| ! | GAATTTGGTGACAAGAGCTC+CGG | - | chr4_4:46697256-46697275 | None:intergenic | 45.0% |
| CGTACTTGGCCATTCCTCGT+TGG | + | chr4_4:46697219-46697238 | Msa0683780:CDS | 55.0% | |
| ACGGCGAATCCAACGAGGAA+TGG | - | chr4_4:46697231-46697250 | None:intergenic | 55.0% | |
| CTCGTTGGATTCGCCGTCAC+CGG | + | chr4_4:46697234-46697253 | Msa0683780:CDS | 60.0% | |
| GGTGACAAGAGCTCCGGTGA+CGG | - | chr4_4:46697250-46697269 | None:intergenic | 60.0% | |
| ! | CGGTGACGGCGAATCCAACG+AGG | - | chr4_4:46697236-46697255 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 46697035 | 46697442 | 46697035 | ID=Msa0683780;Name=Msa0683780 |
| chr4_4 | mRNA | 46697035 | 46697442 | 46697035 | ID=Msa0683780-mRNA-1;Parent=Msa0683780;Name=Msa0683780-mRNA-1;_AED=0.28;_eAED=0.28;_QI=136|1|0.5|1|1|1|2|0|55 |
| chr4_4 | exon | 46697035 | 46697291 | 46697035 | ID=Msa0683780-mRNA-1:exon:11528;Parent=Msa0683780-mRNA-1 |
| chr4_4 | exon | 46697396 | 46697442 | 46697396 | ID=Msa0683780-mRNA-1:exon:11529;Parent=Msa0683780-mRNA-1 |
| chr4_4 | five_prime_UTR | 46697035 | 46697170 | 46697035 | ID=Msa0683780-mRNA-1:five_prime_utr;Parent=Msa0683780-mRNA-1 |
| chr4_4 | CDS | 46697171 | 46697291 | 46697171 | ID=Msa0683780-mRNA-1:cds;Parent=Msa0683780-mRNA-1 |
| chr4_4 | CDS | 46697396 | 46697442 | 46697396 | ID=Msa0683780-mRNA-1:cds;Parent=Msa0683780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
