AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1316680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1316680 MtrunA17_Chr4g0052801 100.000 80 0 0 1 80 1 80 7.71e-56 166
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1316680 AT1G47278.3 57.500 80 34 0 1 80 1 80 4.68e-31 104
Msa1316680 AT1G47278.1 57.500 80 34 0 1 80 1 80 4.68e-31 104
Msa1316680 AT1G47278.2 57.500 80 34 0 1 80 12 91 6.52e-31 104

Find 47 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACATCGTAAATTGAATT+TGG 0.189960 8_4:+17588067 None:intergenic
CAATTCAAGATTGTGTTATC+TGG 0.235113 8_4:-17585891 Msa1316680:three_prime_UTR
AAGAGAGGAATCAGATAAAT+TGG 0.270354 8_4:+17588014 None:intergenic
TTGAGACGGTGTAGATAGTT+TGG 0.292821 8_4:-17588091 Msa1316680:five_prime_UTR
GATTTCAAGTTGTAGGATAA+TGG 0.313664 8_4:-17586321 Msa1316680:intron
TCAGATAAATTGGATGGGTT+TGG 0.328819 8_4:+17588024 None:intergenic
CAGATAAATTGGATGGGTTT+GGG 0.367854 8_4:+17588025 None:intergenic
ATTAAAGATTCAATTGATAC+AGG 0.372142 8_4:+17585785 None:intergenic
ATTTCAAGTTGTAGGATAAT+GGG 0.372893 8_4:-17586320 Msa1316680:intron
AGGATAATGGGGCGGAAAGC+TGG 0.409342 8_4:-17586308 Msa1316680:exon
CGCCGGCTTACTCTCCGTTC+AGG 0.416223 8_4:-17587960 Msa1316680:five_prime_UTR
TTTCCTCGGTTCTCTCTTTG+CGG 0.442316 8_4:-17587898 Msa1316680:intron
TGAGACGGTGTAGATAGTTT+GGG 0.444138 8_4:-17588090 Msa1316680:five_prime_UTR
ATCGGTAAGAAATTGTGAAA+TGG 0.449488 8_4:+17587986 None:intergenic
TTAAAATGTCGGCGTGGATG+AGG 0.477051 8_4:+17587925 None:intergenic
TTTAGTTAAGTTGAAAGAGT+TGG 0.483286 8_4:-17585842 Msa1316680:three_prime_UTR
AAATACATGTATAGAATCTC+AGG 0.487514 8_4:-17586153 Msa1316680:intron
GAGGAATCAGATAAATTGGA+TGG 0.494567 8_4:+17588018 None:intergenic
TAATGGGGCGGAAAGCTGGC+GGG 0.509687 8_4:-17586304 Msa1316680:CDS
ACTTCATAAACCTTGCATGA+AGG 0.526107 8_4:-17586252 Msa1316680:CDS
TGTGAAATGGAACGGAAGAG+AGG 0.534294 8_4:+17587999 None:intergenic
CATCAAACTACTTCCTTCCA+CGG 0.534795 8_4:+17585937 None:intergenic
AATTTCTTACCGATCCTCGC+CGG 0.534965 8_4:-17587977 Msa1316680:five_prime_UTR
GATCATGTTTATGAACTGTA+TGG 0.548690 8_4:-17586225 Msa1316680:CDS
ATGATCATTTCCTTCATGCA+AGG 0.553694 8_4:+17586242 None:intergenic
TAAGAAATTGTGAAATGGAA+CGG 0.560487 8_4:+17587991 None:intergenic
ATAATGGGGCGGAAAGCTGG+CGG 0.563977 8_4:-17586305 Msa1316680:CDS
GAGAGTAAGCCGGCGAGGAT+CGG 0.569692 8_4:+17587968 None:intergenic
TGCAGAGGCTTAGCCGTGGA+AGG 0.569997 8_4:-17585950 Msa1316680:CDS
GAGGAAATCGATTAAAATGT+CGG 0.596074 8_4:+17587914 None:intergenic
GAAACAATATGACAAGGTGA+TGG 0.605169 8_4:+17585740 None:intergenic
AGGAATCAGATAAATTGGAT+GGG 0.610000 8_4:+17588019 None:intergenic
TGATACAGGAAATATTACAT+TGG 0.618915 8_4:+17585799 None:intergenic
GGTTCAGACGGTGACCTGAA+CGG 0.629887 8_4:+17587946 None:intergenic
TGAAGCATGTGCTAAGCAGA+AGG 0.631587 8_4:-17586183 Msa1316680:CDS
GACCTGAACGGAGAGTAAGC+CGG 0.631903 8_4:+17587958 None:intergenic
TTTCAAGTTGTAGGATAATG+GGG 0.640667 8_4:-17586319 Msa1316680:intron
CGGCGTGGATGAGGTTCAGA+CGG 0.645702 8_4:+17587934 None:intergenic
GTATCAATTATCAACTGCAG+AGG 0.657183 8_4:-17585965 Msa1316680:CDS
GAACGGAGAGTAAGCCGGCG+AGG 0.676490 8_4:+17587963 None:intergenic
CAAGTTGTAGGATAATGGGG+CGG 0.699621 8_4:-17586316 Msa1316680:intron
AGGGCAGAAACAATATGACA+AGG 0.700425 8_4:+17585734 None:intergenic
AAAAGAACAGAAAGTCTTGG+GGG 0.704646 8_4:-17585989 Msa1316680:CDS
CAACTGCAGAGGCTTAGCCG+TGG 0.708407 8_4:-17585954 Msa1316680:CDS
AATCGATTAAAATGTCGGCG+TGG 0.719973 8_4:+17587919 None:intergenic
CACATGCTTCAACATCACTG+TGG 0.742984 8_4:+17586195 None:intergenic
TTACCGCAAAGAGAGAACCG+AGG 0.757536 8_4:+17587895 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCAAATCATTTATTTAA+TGG - chr8_4:17587183-17587202 Msa1316680:intron 10.0%
!! AAATCAAATCATTTATTTAA+TGG - chr8_4:17587183-17587202 Msa1316680:intron 10.0%
!!! TAATTAGTTCTCTATTTTAA+TGG - chr8_4:17586016-17586035 Msa1316680:intron 15.0%
!!! TTTTTTTTTTTTTTTACCTG+TGG - chr8_4:17586578-17586597 Msa1316680:intron 15.0%
!!! AATATATGATGTGTTTTATT+GGG - chr8_4:17586637-17586656 Msa1316680:intron 15.0%
!!! TAATTAGTTCTCTATTTTAA+TGG - chr8_4:17586016-17586035 Msa1316680:intron 15.0%
!!! TTTTTTTTTTTTTTTACCTG+TGG - chr8_4:17586578-17586597 Msa1316680:intron 15.0%
!!! AATATATGATGTGTTTTATT+GGG - chr8_4:17586637-17586656 Msa1316680:intron 15.0%
!! TTTACATCGTAAATTGAATT+TGG + chr8_4:17585779-17585798 None:intergenic 20.0%
!! AATAGTTAGTGTATGAAATT+TGG - chr8_4:17586058-17586077 Msa1316680:intron 20.0%
!! ATATGTTTCTTATGAGAAAT+GGG - chr8_4:17586172-17586191 Msa1316680:CDS 20.0%
!!! CAATATATGATGTGTTTTAT+TGG - chr8_4:17586636-17586655 Msa1316680:intron 20.0%
!! ATTTACAAACATAATAACTC+TGG + chr8_4:17586825-17586844 None:intergenic 20.0%
!! TCAAATCATTTATTTAATGG+TGG - chr8_4:17587186-17587205 Msa1316680:intron 20.0%
!! CAAATCATTTATTTAATGGT+GGG - chr8_4:17587187-17587206 Msa1316680:intron 20.0%
!! CAAACTATAGTACTTTAAAT+AGG + chr8_4:17587288-17587307 None:intergenic 20.0%
!!! ATGAAAACTGTTTTTTGATT+TGG + chr8_4:17587491-17587510 None:intergenic 20.0%
!!! AAAAACAGTTTTCATTTTTC+TGG - chr8_4:17587496-17587515 Msa1316680:intron 20.0%
!!! TTTAGTTTGTTAAAATCTGA+CGG - chr8_4:17587723-17587742 Msa1316680:intron 20.0%
!! AAAAGAAAATAATGAGAAGA+GGG + chr8_4:17587762-17587781 None:intergenic 20.0%
!! AAAAAGAAAATAATGAGAAG+AGG + chr8_4:17587763-17587782 None:intergenic 20.0%
!! ATTAAAGATTCAATTGATAC+AGG + chr8_4:17588061-17588080 None:intergenic 20.0%
!! TTTACATCGTAAATTGAATT+TGG + chr8_4:17585779-17585798 None:intergenic 20.0%
!! AATAGTTAGTGTATGAAATT+TGG - chr8_4:17586058-17586077 Msa1316680:intron 20.0%
!! ATATGTTTCTTATGAGAAAT+GGG - chr8_4:17586172-17586191 Msa1316680:CDS 20.0%
!!! CAATATATGATGTGTTTTAT+TGG - chr8_4:17586636-17586655 Msa1316680:intron 20.0%
!! ATTTACAAACATAATAACTC+TGG + chr8_4:17586825-17586844 None:intergenic 20.0%
!! TCAAATCATTTATTTAATGG+TGG - chr8_4:17587186-17587205 Msa1316680:intron 20.0%
!! CAAATCATTTATTTAATGGT+GGG - chr8_4:17587187-17587206 Msa1316680:intron 20.0%
!! CAAACTATAGTACTTTAAAT+AGG + chr8_4:17587288-17587307 None:intergenic 20.0%
!!! ATGAAAACTGTTTTTTGATT+TGG + chr8_4:17587491-17587510 None:intergenic 20.0%
!!! AAAAACAGTTTTCATTTTTC+TGG - chr8_4:17587496-17587515 Msa1316680:intron 20.0%
!!! TTTAGTTTGTTAAAATCTGA+CGG - chr8_4:17587723-17587742 Msa1316680:intron 20.0%
!! AAAAGAAAATAATGAGAAGA+GGG + chr8_4:17587762-17587781 None:intergenic 20.0%
!! AAAAAGAAAATAATGAGAAG+AGG + chr8_4:17587763-17587782 None:intergenic 20.0%
!! ATTAAAGATTCAATTGATAC+AGG + chr8_4:17588061-17588080 None:intergenic 20.0%
! TAAGAAATTGTGAAATGGAA+CGG + chr8_4:17585855-17585874 None:intergenic 25.0%
! TATCTACAATTATGCATTGT+TGG - chr8_4:17585983-17586002 Msa1316680:CDS 25.0%
! ATCTACAATTATGCATTGTT+GGG - chr8_4:17585984-17586003 Msa1316680:CDS 25.0%
! TTCATACACTAACTATTGTA+GGG + chr8_4:17586055-17586074 None:intergenic 25.0%
! TTTCATACACTAACTATTGT+AGG + chr8_4:17586056-17586075 None:intergenic 25.0%
! TAGTGTATGAAATTTGGTTA+TGG - chr8_4:17586064-17586083 Msa1316680:intron 25.0%
! TTCATAAATTAACCTTTGCA+TGG - chr8_4:17586130-17586149 Msa1316680:intron 25.0%
! GATATGTTTCTTATGAGAAA+TGG - chr8_4:17586171-17586190 Msa1316680:CDS 25.0%
! CTCCTTATCTTAAAAGAAAT+GGG + chr8_4:17586300-17586319 None:intergenic 25.0%
! TCTCCTTATCTTAAAAGAAA+TGG + chr8_4:17586301-17586320 None:intergenic 25.0%
!!! ATTTCTTTTAAGATAAGGAG+AGG - chr8_4:17586300-17586319 Msa1316680:CDS 25.0%
! CTCCTTATCTTAAAAGAAAT+GGG + chr8_4:17586300-17586319 None:intergenic 25.0%
! TCTCCTTATCTTAAAAGAAA+TGG + chr8_4:17586301-17586320 None:intergenic 25.0%
!!! ATTTCTTTTAAGATAAGGAG+AGG - chr8_4:17586300-17586319 Msa1316680:CDS 25.0%
!! TATTTAATGGTGGGATTTAT+TGG - chr8_4:17587196-17587215 Msa1316680:intron 25.0%
!!! TTTTTTTAATGTTGACTGCT+TGG - chr8_4:17587382-17587401 Msa1316680:intron 25.0%
!!! ATTTCAAGTTGTAGGATAAT+GGG - chr8_4:17587523-17587542 Msa1316680:intron 25.0%
! AAATACATGTATAGAATCTC+AGG - chr8_4:17587690-17587709 Msa1316680:intron 25.0%
! TAAAAAGAACAGAAAGTCTT+GGG - chr8_4:17587852-17587871 Msa1316680:intron 25.0%
!!! TTTAGTTAAGTTGAAAGAGT+TGG - chr8_4:17588001-17588020 Msa1316680:five_prime_UTR 25.0%
! TGATACAGGAAATATTACAT+TGG + chr8_4:17588047-17588066 None:intergenic 25.0%
! TAAGAAATTGTGAAATGGAA+CGG + chr8_4:17585855-17585874 None:intergenic 25.0%
! TATCTACAATTATGCATTGT+TGG - chr8_4:17585983-17586002 Msa1316680:CDS 25.0%
! ATCTACAATTATGCATTGTT+GGG - chr8_4:17585984-17586003 Msa1316680:CDS 25.0%
! TTCATACACTAACTATTGTA+GGG + chr8_4:17586055-17586074 None:intergenic 25.0%
! TTTCATACACTAACTATTGT+AGG + chr8_4:17586056-17586075 None:intergenic 25.0%
! TAGTGTATGAAATTTGGTTA+TGG - chr8_4:17586064-17586083 Msa1316680:intron 25.0%
! TTCATAAATTAACCTTTGCA+TGG - chr8_4:17586130-17586149 Msa1316680:intron 25.0%
! GATATGTTTCTTATGAGAAA+TGG - chr8_4:17586171-17586190 Msa1316680:CDS 25.0%
! CTCCTTATCTTAAAAGAAAT+GGG + chr8_4:17586300-17586319 None:intergenic 25.0%
! TCTCCTTATCTTAAAAGAAA+TGG + chr8_4:17586301-17586320 None:intergenic 25.0%
!!! ATTTCTTTTAAGATAAGGAG+AGG - chr8_4:17586300-17586319 Msa1316680:CDS 25.0%
! CTCCTTATCTTAAAAGAAAT+GGG + chr8_4:17586300-17586319 None:intergenic 25.0%
! TCTCCTTATCTTAAAAGAAA+TGG + chr8_4:17586301-17586320 None:intergenic 25.0%
!!! ATTTCTTTTAAGATAAGGAG+AGG - chr8_4:17586300-17586319 Msa1316680:CDS 25.0%
!! TATTTAATGGTGGGATTTAT+TGG - chr8_4:17587196-17587215 Msa1316680:intron 25.0%
!!! TTTTTTTAATGTTGACTGCT+TGG - chr8_4:17587382-17587401 Msa1316680:intron 25.0%
!!! ATTTCAAGTTGTAGGATAAT+GGG - chr8_4:17587523-17587542 Msa1316680:intron 25.0%
! AAATACATGTATAGAATCTC+AGG - chr8_4:17587690-17587709 Msa1316680:intron 25.0%
! TAAAAAGAACAGAAAGTCTT+GGG - chr8_4:17587852-17587871 Msa1316680:intron 25.0%
!!! TTTAGTTAAGTTGAAAGAGT+TGG - chr8_4:17588001-17588020 Msa1316680:five_prime_UTR 25.0%
! TGATACAGGAAATATTACAT+TGG + chr8_4:17588047-17588066 None:intergenic 25.0%
AGGAATCAGATAAATTGGAT+GGG + chr8_4:17585827-17585846 None:intergenic 30.0%
AAGAGAGGAATCAGATAAAT+TGG + chr8_4:17585832-17585851 None:intergenic 30.0%
ATCGGTAAGAAATTGTGAAA+TGG + chr8_4:17585860-17585879 None:intergenic 30.0%
GAGGAAATCGATTAAAATGT+CGG + chr8_4:17585932-17585951 None:intergenic 30.0%
!! GACATTTTAATCGATTTCCT+CGG - chr8_4:17585931-17585950 Msa1316680:exon 30.0%
AATTTGGTTATGGTAGATGA+AGG - chr8_4:17586074-17586093 Msa1316680:intron 30.0%
ATTTGGTTATGGTAGATGAA+GGG - chr8_4:17586075-17586094 Msa1316680:intron 30.0%
!! CTACTCTAAAACCATAGTAA+CGG - chr8_4:17586269-17586288 Msa1316680:CDS 30.0%
!!! TGCCCATTTCTTTTAAGATA+AGG - chr8_4:17586295-17586314 Msa1316680:CDS 30.0%
TCAAATGTGTAACCTCATTA+GGG + chr8_4:17586616-17586635 None:intergenic 30.0%
!! ATGATGTGTTTTATTGGGTT+TGG - chr8_4:17586642-17586661 Msa1316680:intron 30.0%
TTATCTTAAAAGAAATGGGC+AGG + chr8_4:17586296-17586315 None:intergenic 30.0%
!!! TGCCCATTTCTTTTAAGATA+AGG - chr8_4:17586295-17586314 Msa1316680:CDS 30.0%
TGAAATTACACTCTTCAGTT+GGG - chr8_4:17587317-17587336 Msa1316680:intron 30.0%
!! ACAGTTTTCATTTTTCTGGT+TGG - chr8_4:17587500-17587519 Msa1316680:intron 30.0%
!! GATTTCAAGTTGTAGGATAA+TGG - chr8_4:17587522-17587541 Msa1316680:intron 30.0%
!! TTTCAAGTTGTAGGATAATG+GGG - chr8_4:17587524-17587543 Msa1316680:intron 30.0%
GATCATGTTTATGAACTGTA+TGG - chr8_4:17587618-17587637 Msa1316680:intron 30.0%
GTAAAAAGAACAGAAAGTCT+TGG - chr8_4:17587851-17587870 Msa1316680:intron 30.0%
AAAAAGAACAGAAAGTCTTG+GGG - chr8_4:17587853-17587872 Msa1316680:intron 30.0%
CAATTCAAGATTGTGTTATC+TGG - chr8_4:17587952-17587971 Msa1316680:five_prime_UTR 30.0%
AGGAATCAGATAAATTGGAT+GGG + chr8_4:17585827-17585846 None:intergenic 30.0%
AAGAGAGGAATCAGATAAAT+TGG + chr8_4:17585832-17585851 None:intergenic 30.0%
ATCGGTAAGAAATTGTGAAA+TGG + chr8_4:17585860-17585879 None:intergenic 30.0%
GAGGAAATCGATTAAAATGT+CGG + chr8_4:17585932-17585951 None:intergenic 30.0%
!! GACATTTTAATCGATTTCCT+CGG - chr8_4:17585931-17585950 Msa1316680:exon 30.0%
AATTTGGTTATGGTAGATGA+AGG - chr8_4:17586074-17586093 Msa1316680:intron 30.0%
ATTTGGTTATGGTAGATGAA+GGG - chr8_4:17586075-17586094 Msa1316680:intron 30.0%
!! CTACTCTAAAACCATAGTAA+CGG - chr8_4:17586269-17586288 Msa1316680:CDS 30.0%
!!! TGCCCATTTCTTTTAAGATA+AGG - chr8_4:17586295-17586314 Msa1316680:CDS 30.0%
TCAAATGTGTAACCTCATTA+GGG + chr8_4:17586616-17586635 None:intergenic 30.0%
!! ATGATGTGTTTTATTGGGTT+TGG - chr8_4:17586642-17586661 Msa1316680:intron 30.0%
TTATCTTAAAAGAAATGGGC+AGG + chr8_4:17586296-17586315 None:intergenic 30.0%
!!! TGCCCATTTCTTTTAAGATA+AGG - chr8_4:17586295-17586314 Msa1316680:CDS 30.0%
TGAAATTACACTCTTCAGTT+GGG - chr8_4:17587317-17587336 Msa1316680:intron 30.0%
!! ACAGTTTTCATTTTTCTGGT+TGG - chr8_4:17587500-17587519 Msa1316680:intron 30.0%
!! GATTTCAAGTTGTAGGATAA+TGG - chr8_4:17587522-17587541 Msa1316680:intron 30.0%
!! TTTCAAGTTGTAGGATAATG+GGG - chr8_4:17587524-17587543 Msa1316680:intron 30.0%
GATCATGTTTATGAACTGTA+TGG - chr8_4:17587618-17587637 Msa1316680:intron 30.0%
GTAAAAAGAACAGAAAGTCT+TGG - chr8_4:17587851-17587870 Msa1316680:intron 30.0%
AAAAAGAACAGAAAGTCTTG+GGG - chr8_4:17587853-17587872 Msa1316680:intron 30.0%
CAATTCAAGATTGTGTTATC+TGG - chr8_4:17587952-17587971 Msa1316680:five_prime_UTR 30.0%
! TGGGTCATTTCGAAGTTTTA+GGG + chr8_4:17585802-17585821 None:intergenic 35.0%
! TTGGGTCATTTCGAAGTTTT+AGG + chr8_4:17585803-17585822 None:intergenic 35.0%
! CAGATAAATTGGATGGGTTT+GGG + chr8_4:17585821-17585840 None:intergenic 35.0%
! TCAGATAAATTGGATGGGTT+TGG + chr8_4:17585822-17585841 None:intergenic 35.0%
GAGGAATCAGATAAATTGGA+TGG + chr8_4:17585828-17585847 None:intergenic 35.0%
ATAAGATACTCGGTCGTTAT+AGG - chr8_4:17586337-17586356 Msa1316680:intron 35.0%
TACATGCCAATATGGATTCA+CGG + chr8_4:17586406-17586425 None:intergenic 35.0%
GTCAAATGTGTAACCTCATT+AGG + chr8_4:17586617-17586636 None:intergenic 35.0%
TGTGTACATGTATCACTGTT+TGG - chr8_4:17586844-17586863 Msa1316680:intron 35.0%
! GTATCACTGTTTGGTGAATT+TGG - chr8_4:17586853-17586872 Msa1316680:intron 35.0%
TACATGCCAATATGGATTCA+CGG + chr8_4:17586406-17586425 None:intergenic 35.0%
AGGGATTTATTGATCAACGA+TGG - chr8_4:17587147-17587166 Msa1316680:intron 35.0%
GGGATTTATTGATCAACGAT+GGG - chr8_4:17587148-17587167 Msa1316680:intron 35.0%
CTTTAAATAGGCCAACTCTA+TGG + chr8_4:17587276-17587295 None:intergenic 35.0%
! CAACTGAAGAGTGTAATTTC+AGG + chr8_4:17587318-17587337 None:intergenic 35.0%
CTGAAATTACACTCTTCAGT+TGG - chr8_4:17587316-17587335 Msa1316680:intron 35.0%
!!! TTTTTTGATTCCATGTGCAC+TGG - chr8_4:17587351-17587370 Msa1316680:intron 35.0%
ACTTCATAAACCTTGCATGA+AGG - chr8_4:17587591-17587610 Msa1316680:intron 35.0%
ATGATCATTTCCTTCATGCA+AGG + chr8_4:17587604-17587623 None:intergenic 35.0%
GAAAATAATGAGAAGAGGGA+AGG + chr8_4:17587758-17587777 None:intergenic 35.0%
AAAAGAACAGAAAGTCTTGG+GGG - chr8_4:17587854-17587873 Msa1316680:intron 35.0%
GTATCAATTATCAACTGCAG+AGG - chr8_4:17587878-17587897 Msa1316680:intron 35.0%
! TGGGTCATTTCGAAGTTTTA+GGG + chr8_4:17585802-17585821 None:intergenic 35.0%
! TTGGGTCATTTCGAAGTTTT+AGG + chr8_4:17585803-17585822 None:intergenic 35.0%
! CAGATAAATTGGATGGGTTT+GGG + chr8_4:17585821-17585840 None:intergenic 35.0%
! TCAGATAAATTGGATGGGTT+TGG + chr8_4:17585822-17585841 None:intergenic 35.0%
GAGGAATCAGATAAATTGGA+TGG + chr8_4:17585828-17585847 None:intergenic 35.0%
ATAAGATACTCGGTCGTTAT+AGG - chr8_4:17586337-17586356 Msa1316680:intron 35.0%
TACATGCCAATATGGATTCA+CGG + chr8_4:17586406-17586425 None:intergenic 35.0%
GTCAAATGTGTAACCTCATT+AGG + chr8_4:17586617-17586636 None:intergenic 35.0%
TGTGTACATGTATCACTGTT+TGG - chr8_4:17586844-17586863 Msa1316680:intron 35.0%
! GTATCACTGTTTGGTGAATT+TGG - chr8_4:17586853-17586872 Msa1316680:intron 35.0%
TACATGCCAATATGGATTCA+CGG + chr8_4:17586406-17586425 None:intergenic 35.0%
AGGGATTTATTGATCAACGA+TGG - chr8_4:17587147-17587166 Msa1316680:intron 35.0%
GGGATTTATTGATCAACGAT+GGG - chr8_4:17587148-17587167 Msa1316680:intron 35.0%
CTTTAAATAGGCCAACTCTA+TGG + chr8_4:17587276-17587295 None:intergenic 35.0%
! CAACTGAAGAGTGTAATTTC+AGG + chr8_4:17587318-17587337 None:intergenic 35.0%
CTGAAATTACACTCTTCAGT+TGG - chr8_4:17587316-17587335 Msa1316680:intron 35.0%
!!! TTTTTTGATTCCATGTGCAC+TGG - chr8_4:17587351-17587370 Msa1316680:intron 35.0%
ACTTCATAAACCTTGCATGA+AGG - chr8_4:17587591-17587610 Msa1316680:intron 35.0%
ATGATCATTTCCTTCATGCA+AGG + chr8_4:17587604-17587623 None:intergenic 35.0%
GAAAATAATGAGAAGAGGGA+AGG + chr8_4:17587758-17587777 None:intergenic 35.0%
AAAAGAACAGAAAGTCTTGG+GGG - chr8_4:17587854-17587873 Msa1316680:intron 35.0%
GTATCAATTATCAACTGCAG+AGG - chr8_4:17587878-17587897 Msa1316680:intron 35.0%
TTGAGACGGTGTAGATAGTT+TGG - chr8_4:17585752-17585771 Msa1316680:three_prime_UTR 40.0%
TGAGACGGTGTAGATAGTTT+GGG - chr8_4:17585753-17585772 Msa1316680:three_prime_UTR 40.0%
AATCGATTAAAATGTCGGCG+TGG + chr8_4:17585927-17585946 None:intergenic 40.0%
AACATATCCTTTACTCCCGA+GGG + chr8_4:17586159-17586178 None:intergenic 40.0%
AAACATATCCTTTACTCCCG+AGG + chr8_4:17586160-17586179 None:intergenic 40.0%
CTACGCGGTTATAAGATACT+CGG - chr8_4:17586327-17586346 Msa1316680:intron 40.0%
!! AGTTGGAAAGGTATTGCCAT+GGG - chr8_4:17586360-17586379 Msa1316680:intron 40.0%
ACATGCCAATATGGATTCAC+GGG + chr8_4:17586405-17586424 None:intergenic 40.0%
CCATAGCATACATGCCAATA+TGG + chr8_4:17586414-17586433 None:intergenic 40.0%
CCATATTGGCATGTATGCTA+TGG - chr8_4:17586411-17586430 Msa1316680:intron 40.0%
TTGGCATGTATGCTATGGAT+CGG - chr8_4:17586416-17586435 Msa1316680:intron 40.0%
!! AGTTGACAAAAGAGTGTCCA+AGG - chr8_4:17586469-17586488 Msa1316680:intron 40.0%
ATGTGTAACCTCATTAGGGA+GGG + chr8_4:17586612-17586631 None:intergenic 40.0%
AATGTGTAACCTCATTAGGG+AGG + chr8_4:17586613-17586632 None:intergenic 40.0%
TTGGTGAATTTGGACCAACT+TGG - chr8_4:17586863-17586882 Msa1316680:intron 40.0%
CATACAAGACAAGACCAAGT+TGG + chr8_4:17586880-17586899 None:intergenic 40.0%
!! CAACTTGGTCTTGTCTTGTA+TGG - chr8_4:17586878-17586897 Msa1316680:intron 40.0%
TGGACCTGTCCTTATATACA+TGG - chr8_4:17586898-17586917 Msa1316680:intron 40.0%
AGGTCCATGTATATAAGGAC+AGG + chr8_4:17586905-17586924 None:intergenic 40.0%
ATAAGATGCTCGGTCGTTAT+AGG - chr8_4:17586966-17586985 Msa1316680:intron 40.0%
!! AGTTGGAAAGGTATTGCCAT+GGG - chr8_4:17586360-17586379 Msa1316680:intron 40.0%
ACATGCCAATATGGATTCAC+GGG + chr8_4:17586405-17586424 None:intergenic 40.0%
CCATAGCATACATGCCAATA+TGG + chr8_4:17586414-17586433 None:intergenic 40.0%
CCATATTGGCATGTATGCTA+TGG - chr8_4:17586411-17586430 Msa1316680:intron 40.0%
TTGGCATGTATGCTATGGAT+CGG - chr8_4:17586416-17586435 Msa1316680:intron 40.0%
!! TATTGATCAACGATGGGCTA+TGG - chr8_4:17587154-17587173 Msa1316680:intron 40.0%
! GGTGGGATTTATTGGTCTAA+TGG - chr8_4:17587204-17587223 Msa1316680:intron 40.0%
! GGGATTTATTGGTCTAATGG+TGG - chr8_4:17587207-17587226 Msa1316680:intron 40.0%
TCACTTGTGTACCATAGAGT+TGG - chr8_4:17587262-17587281 Msa1316680:intron 40.0%
!! CTGGTTGGATTTCAAGTTGT+AGG - chr8_4:17587515-17587534 Msa1316680:intron 40.0%
CATCAAACTACTTCCTTCCA+CGG + chr8_4:17587909-17587928 None:intergenic 40.0%
TTGAGACGGTGTAGATAGTT+TGG - chr8_4:17585752-17585771 Msa1316680:three_prime_UTR 40.0%
TGAGACGGTGTAGATAGTTT+GGG - chr8_4:17585753-17585772 Msa1316680:three_prime_UTR 40.0%
AATCGATTAAAATGTCGGCG+TGG + chr8_4:17585927-17585946 None:intergenic 40.0%
AACATATCCTTTACTCCCGA+GGG + chr8_4:17586159-17586178 None:intergenic 40.0%
AAACATATCCTTTACTCCCG+AGG + chr8_4:17586160-17586179 None:intergenic 40.0%
CTACGCGGTTATAAGATACT+CGG - chr8_4:17586327-17586346 Msa1316680:intron 40.0%
!! AGTTGGAAAGGTATTGCCAT+GGG - chr8_4:17586360-17586379 Msa1316680:intron 40.0%
ACATGCCAATATGGATTCAC+GGG + chr8_4:17586405-17586424 None:intergenic 40.0%
CCATAGCATACATGCCAATA+TGG + chr8_4:17586414-17586433 None:intergenic 40.0%
CCATATTGGCATGTATGCTA+TGG - chr8_4:17586411-17586430 Msa1316680:intron 40.0%
TTGGCATGTATGCTATGGAT+CGG - chr8_4:17586416-17586435 Msa1316680:intron 40.0%
!! AGTTGACAAAAGAGTGTCCA+AGG - chr8_4:17586469-17586488 Msa1316680:intron 40.0%
ATGTGTAACCTCATTAGGGA+GGG + chr8_4:17586612-17586631 None:intergenic 40.0%
AATGTGTAACCTCATTAGGG+AGG + chr8_4:17586613-17586632 None:intergenic 40.0%
TTGGTGAATTTGGACCAACT+TGG - chr8_4:17586863-17586882 Msa1316680:intron 40.0%
CATACAAGACAAGACCAAGT+TGG + chr8_4:17586880-17586899 None:intergenic 40.0%
!! CAACTTGGTCTTGTCTTGTA+TGG - chr8_4:17586878-17586897 Msa1316680:intron 40.0%
TGGACCTGTCCTTATATACA+TGG - chr8_4:17586898-17586917 Msa1316680:intron 40.0%
AGGTCCATGTATATAAGGAC+AGG + chr8_4:17586905-17586924 None:intergenic 40.0%
ATAAGATGCTCGGTCGTTAT+AGG - chr8_4:17586966-17586985 Msa1316680:intron 40.0%
!! AGTTGGAAAGGTATTGCCAT+GGG - chr8_4:17586360-17586379 Msa1316680:intron 40.0%
ACATGCCAATATGGATTCAC+GGG + chr8_4:17586405-17586424 None:intergenic 40.0%
CCATAGCATACATGCCAATA+TGG + chr8_4:17586414-17586433 None:intergenic 40.0%
CCATATTGGCATGTATGCTA+TGG - chr8_4:17586411-17586430 Msa1316680:intron 40.0%
TTGGCATGTATGCTATGGAT+CGG - chr8_4:17586416-17586435 Msa1316680:intron 40.0%
!! TATTGATCAACGATGGGCTA+TGG - chr8_4:17587154-17587173 Msa1316680:intron 40.0%
! GGTGGGATTTATTGGTCTAA+TGG - chr8_4:17587204-17587223 Msa1316680:intron 40.0%
! GGGATTTATTGGTCTAATGG+TGG - chr8_4:17587207-17587226 Msa1316680:intron 40.0%
TCACTTGTGTACCATAGAGT+TGG - chr8_4:17587262-17587281 Msa1316680:intron 40.0%
!! CTGGTTGGATTTCAAGTTGT+AGG - chr8_4:17587515-17587534 Msa1316680:intron 40.0%
CATCAAACTACTTCCTTCCA+CGG + chr8_4:17587909-17587928 None:intergenic 40.0%
TGTGAAATGGAACGGAAGAG+AGG + chr8_4:17585847-17585866 None:intergenic 45.0%
AATTTCTTACCGATCCTCGC+CGG - chr8_4:17585866-17585885 Msa1316680:three_prime_UTR 45.0%
TTAAAATGTCGGCGTGGATG+AGG + chr8_4:17585921-17585940 None:intergenic 45.0%
TTTCCTCGGTTCTCTCTTTG+CGG - chr8_4:17585945-17585964 Msa1316680:CDS 45.0%
AACCTTTGCATGGTAACCCT+CGG - chr8_4:17586140-17586159 Msa1316680:intron 45.0%
AATGGGCATCTCCGTTACTA+TGG + chr8_4:17586283-17586302 None:intergenic 45.0%
ATAAGGAGAGGATCTCTACG+CGG - chr8_4:17586312-17586331 Msa1316680:exon 45.0%
TACTCGGTCGTTATAGGAGT+TGG - chr8_4:17586343-17586362 Msa1316680:intron 45.0%
GGTCGTTATAGGAGTTGGAA+AGG - chr8_4:17586348-17586367 Msa1316680:intron 45.0%
!! GAGTTGGAAAGGTATTGCCA+TGG - chr8_4:17586359-17586378 Msa1316680:intron 45.0%
ATATGGATTCACGGGACACA+CGG + chr8_4:17586397-17586416 None:intergenic 45.0%
TGTGTCCCGTGAATCCATAT+TGG - chr8_4:17586397-17586416 Msa1316680:intron 45.0%
TGGCATGTATGCTATGGATC+GGG - chr8_4:17586417-17586436 Msa1316680:intron 45.0%
!! TGACAAAAGAGTGTCCAAGG+AGG - chr8_4:17586472-17586491 Msa1316680:intron 45.0%
TTGTAGCTGCACAGACTACT+GGG + chr8_4:17586557-17586576 None:intergenic 45.0%
TGGGCAGGTCCATGTATATA+AGG + chr8_4:17586910-17586929 None:intergenic 45.0%
ATAAGGAGAGGATCTCTACC+CGG - chr8_4:17586941-17586960 Msa1316680:intron 45.0%
CTACCCGGTTATAAGATGCT+CGG - chr8_4:17586956-17586975 Msa1316680:intron 45.0%
ACGACCGAGCATCTTATAAC+CGG + chr8_4:17586963-17586982 None:intergenic 45.0%
GGTCGTTATAGGAGTTGGAA+AGG - chr8_4:17586348-17586367 Msa1316680:intron 45.0%
!! GAGTTGGAAAGGTATTGCCA+TGG - chr8_4:17586359-17586378 Msa1316680:intron 45.0%
TGCCATGGGTGTAGAAAACT+CGG - chr8_4:17586374-17586393 Msa1316680:intron 45.0%
TGTGTCCCGTGAATCCATAT+TGG - chr8_4:17586397-17586416 Msa1316680:intron 45.0%
TGGCATGTATGCTATGGATC+GGG - chr8_4:17586417-17586436 Msa1316680:intron 45.0%
!! TGACAAAAGAGTGTCCAACG+AGG - chr8_4:17587101-17587120 Msa1316680:intron 45.0%
AACACTAATGCCAGTGCACA+TGG + chr8_4:17587364-17587383 None:intergenic 45.0%
!! CAAGTTGTAGGATAATGGGG+CGG - chr8_4:17587527-17587546 Msa1316680:intron 45.0%
CACATGCTTCAACATCACTG+TGG + chr8_4:17587651-17587670 None:intergenic 45.0%
TGAAGCATGTGCTAAGCAGA+AGG - chr8_4:17587660-17587679 Msa1316680:intron 45.0%
TGTGAAATGGAACGGAAGAG+AGG + chr8_4:17585847-17585866 None:intergenic 45.0%
AATTTCTTACCGATCCTCGC+CGG - chr8_4:17585866-17585885 Msa1316680:three_prime_UTR 45.0%
TTAAAATGTCGGCGTGGATG+AGG + chr8_4:17585921-17585940 None:intergenic 45.0%
TTTCCTCGGTTCTCTCTTTG+CGG - chr8_4:17585945-17585964 Msa1316680:CDS 45.0%
AACCTTTGCATGGTAACCCT+CGG - chr8_4:17586140-17586159 Msa1316680:intron 45.0%
AATGGGCATCTCCGTTACTA+TGG + chr8_4:17586283-17586302 None:intergenic 45.0%
ATAAGGAGAGGATCTCTACG+CGG - chr8_4:17586312-17586331 Msa1316680:exon 45.0%
TACTCGGTCGTTATAGGAGT+TGG - chr8_4:17586343-17586362 Msa1316680:intron 45.0%
GGTCGTTATAGGAGTTGGAA+AGG - chr8_4:17586348-17586367 Msa1316680:intron 45.0%
!! GAGTTGGAAAGGTATTGCCA+TGG - chr8_4:17586359-17586378 Msa1316680:intron 45.0%
ATATGGATTCACGGGACACA+CGG + chr8_4:17586397-17586416 None:intergenic 45.0%
TGTGTCCCGTGAATCCATAT+TGG - chr8_4:17586397-17586416 Msa1316680:intron 45.0%
TGGCATGTATGCTATGGATC+GGG - chr8_4:17586417-17586436 Msa1316680:intron 45.0%
!! TGACAAAAGAGTGTCCAAGG+AGG - chr8_4:17586472-17586491 Msa1316680:intron 45.0%
TTGTAGCTGCACAGACTACT+GGG + chr8_4:17586557-17586576 None:intergenic 45.0%
TGGGCAGGTCCATGTATATA+AGG + chr8_4:17586910-17586929 None:intergenic 45.0%
ATAAGGAGAGGATCTCTACC+CGG - chr8_4:17586941-17586960 Msa1316680:intron 45.0%
CTACCCGGTTATAAGATGCT+CGG - chr8_4:17586956-17586975 Msa1316680:intron 45.0%
ACGACCGAGCATCTTATAAC+CGG + chr8_4:17586963-17586982 None:intergenic 45.0%
GGTCGTTATAGGAGTTGGAA+AGG - chr8_4:17586348-17586367 Msa1316680:intron 45.0%
!! GAGTTGGAAAGGTATTGCCA+TGG - chr8_4:17586359-17586378 Msa1316680:intron 45.0%
TGCCATGGGTGTAGAAAACT+CGG - chr8_4:17586374-17586393 Msa1316680:intron 45.0%
TGTGTCCCGTGAATCCATAT+TGG - chr8_4:17586397-17586416 Msa1316680:intron 45.0%
TGGCATGTATGCTATGGATC+GGG - chr8_4:17586417-17586436 Msa1316680:intron 45.0%
!! TGACAAAAGAGTGTCCAACG+AGG - chr8_4:17587101-17587120 Msa1316680:intron 45.0%
AACACTAATGCCAGTGCACA+TGG + chr8_4:17587364-17587383 None:intergenic 45.0%
!! CAAGTTGTAGGATAATGGGG+CGG - chr8_4:17587527-17587546 Msa1316680:intron 45.0%
CACATGCTTCAACATCACTG+TGG + chr8_4:17587651-17587670 None:intergenic 45.0%
TGAAGCATGTGCTAAGCAGA+AGG - chr8_4:17587660-17587679 Msa1316680:intron 45.0%
TTACCGCAAAGAGAGAACCG+AGG + chr8_4:17585951-17585970 None:intergenic 50.0%
ACCTTTGCATGGTAACCCTC+GGG - chr8_4:17586141-17586160 Msa1316680:intron 50.0%
ATGGTAACCCTCGGGAGTAA+AGG - chr8_4:17586149-17586168 Msa1316680:intron 50.0%
! CACGGAGTTTTCTACACCCA+TGG + chr8_4:17586379-17586398 None:intergenic 50.0%
CTTGTAGCTGCACAGACTAC+TGG + chr8_4:17586558-17586577 None:intergenic 50.0%
CGACCGAGCATCTTATAACC+GGG + chr8_4:17586962-17586981 None:intergenic 50.0%
TGCTCGGTCGTTATAGGAGT+TGG - chr8_4:17586972-17586991 Msa1316680:intron 50.0%
! CACCGAGTTTTCTACACCCA+TGG + chr8_4:17587008-17587027 None:intergenic 50.0%
TTACCGCAAAGAGAGAACCG+AGG + chr8_4:17585951-17585970 None:intergenic 50.0%
ACCTTTGCATGGTAACCCTC+GGG - chr8_4:17586141-17586160 Msa1316680:intron 50.0%
ATGGTAACCCTCGGGAGTAA+AGG - chr8_4:17586149-17586168 Msa1316680:intron 50.0%
! CACGGAGTTTTCTACACCCA+TGG + chr8_4:17586379-17586398 None:intergenic 50.0%
CTTGTAGCTGCACAGACTAC+TGG + chr8_4:17586558-17586577 None:intergenic 50.0%
CGACCGAGCATCTTATAACC+GGG + chr8_4:17586962-17586981 None:intergenic 50.0%
TGCTCGGTCGTTATAGGAGT+TGG - chr8_4:17586972-17586991 Msa1316680:intron 50.0%
! CACCGAGTTTTCTACACCCA+TGG + chr8_4:17587008-17587027 None:intergenic 50.0%
GACCTGAACGGAGAGTAAGC+CGG + chr8_4:17585888-17585907 None:intergenic 55.0%
GGTTCAGACGGTGACCTGAA+CGG + chr8_4:17585900-17585919 None:intergenic 55.0%
TCCCGAGGGTTACCATGCAA+AGG + chr8_4:17586145-17586164 None:intergenic 55.0%
TGTCCAAGGAGGCAACGTCT+TGG - chr8_4:17586483-17586502 Msa1316680:intron 55.0%
GTCCAAGGAGGCAACGTCTT+GGG - chr8_4:17586484-17586503 Msa1316680:intron 55.0%
AGGCAACGTCTTGGGTCGAT+GGG - chr8_4:17586492-17586511 Msa1316680:intron 55.0%
! ACCGAGTCTGGGTTGACATG+CGG - chr8_4:17586522-17586541 Msa1316680:intron 55.0%
CTCAGACTCCCTCCCTAATG+AGG - chr8_4:17586601-17586620 Msa1316680:intron 55.0%
TGTCCAACGAGGCAACGTCT+TGG - chr8_4:17587112-17587131 Msa1316680:intron 55.0%
GTCCAACGAGGCAACGTCTT+GGG - chr8_4:17587113-17587132 Msa1316680:intron 55.0%
AGGCAACGTCTTGGGTCGAT+GGG - chr8_4:17586492-17586511 Msa1316680:intron 55.0%
!! AGGATAATGGGGCGGAAAGC+TGG - chr8_4:17587535-17587554 Msa1316680:intron 55.0%
! ATAATGGGGCGGAAAGCTGG+CGG - chr8_4:17587538-17587557 Msa1316680:intron 55.0%
GACCTGAACGGAGAGTAAGC+CGG + chr8_4:17585888-17585907 None:intergenic 55.0%
GGTTCAGACGGTGACCTGAA+CGG + chr8_4:17585900-17585919 None:intergenic 55.0%
TCCCGAGGGTTACCATGCAA+AGG + chr8_4:17586145-17586164 None:intergenic 55.0%
TGTCCAAGGAGGCAACGTCT+TGG - chr8_4:17586483-17586502 Msa1316680:intron 55.0%
GTCCAAGGAGGCAACGTCTT+GGG - chr8_4:17586484-17586503 Msa1316680:intron 55.0%
AGGCAACGTCTTGGGTCGAT+GGG - chr8_4:17586492-17586511 Msa1316680:intron 55.0%
! ACCGAGTCTGGGTTGACATG+CGG - chr8_4:17586522-17586541 Msa1316680:intron 55.0%
CTCAGACTCCCTCCCTAATG+AGG - chr8_4:17586601-17586620 Msa1316680:intron 55.0%
TGTCCAACGAGGCAACGTCT+TGG - chr8_4:17587112-17587131 Msa1316680:intron 55.0%
GTCCAACGAGGCAACGTCTT+GGG - chr8_4:17587113-17587132 Msa1316680:intron 55.0%
AGGCAACGTCTTGGGTCGAT+GGG - chr8_4:17586492-17586511 Msa1316680:intron 55.0%
!! AGGATAATGGGGCGGAAAGC+TGG - chr8_4:17587535-17587554 Msa1316680:intron 55.0%
! ATAATGGGGCGGAAAGCTGG+CGG - chr8_4:17587538-17587557 Msa1316680:intron 55.0%
GAGAGTAAGCCGGCGAGGAT+CGG + chr8_4:17585878-17585897 None:intergenic 60.0%
CGGCGTGGATGAGGTTCAGA+CGG + chr8_4:17585912-17585931 None:intergenic 60.0%
GACCCAAGACGTTGCCTCCT+TGG + chr8_4:17586489-17586508 None:intergenic 60.0%
GAGGCAACGTCTTGGGTCGA+TGG - chr8_4:17586491-17586510 Msa1316680:intron 60.0%
CAACGTCTTGGGTCGATGGG+AGG - chr8_4:17586495-17586514 Msa1316680:intron 60.0%
GTCTTGGGTCGATGGGAGGA+GGG - chr8_4:17586499-17586518 Msa1316680:intron 60.0%
CCCGCATGTCAACCCAGACT+CGG + chr8_4:17586526-17586545 None:intergenic 60.0%
! CCGAGTCTGGGTTGACATGC+GGG - chr8_4:17586523-17586542 Msa1316680:intron 60.0%
GACCCAAGACGTTGCCTCGT+TGG + chr8_4:17587118-17587137 None:intergenic 60.0%
GAGGCAACGTCTTGGGTCGA+TGG - chr8_4:17586491-17586510 Msa1316680:intron 60.0%
CAACGTCTTGGGTCGATGGG+AGG - chr8_4:17586495-17586514 Msa1316680:intron 60.0%
GTCTTGGGTCGATGGGAGGA+GGG - chr8_4:17586499-17586518 Msa1316680:intron 60.0%
TAATGGGGCGGAAAGCTGGC+GGG - chr8_4:17587539-17587558 Msa1316680:intron 60.0%
CAACTGCAGAGGCTTAGCCG+TGG - chr8_4:17587889-17587908 Msa1316680:intron 60.0%
TGCAGAGGCTTAGCCGTGGA+AGG - chr8_4:17587893-17587912 Msa1316680:intron 60.0%
GAGAGTAAGCCGGCGAGGAT+CGG + chr8_4:17585878-17585897 None:intergenic 60.0%
CGGCGTGGATGAGGTTCAGA+CGG + chr8_4:17585912-17585931 None:intergenic 60.0%
GACCCAAGACGTTGCCTCCT+TGG + chr8_4:17586489-17586508 None:intergenic 60.0%
GAGGCAACGTCTTGGGTCGA+TGG - chr8_4:17586491-17586510 Msa1316680:intron 60.0%
CAACGTCTTGGGTCGATGGG+AGG - chr8_4:17586495-17586514 Msa1316680:intron 60.0%
GTCTTGGGTCGATGGGAGGA+GGG - chr8_4:17586499-17586518 Msa1316680:intron 60.0%
CCCGCATGTCAACCCAGACT+CGG + chr8_4:17586526-17586545 None:intergenic 60.0%
! CCGAGTCTGGGTTGACATGC+GGG - chr8_4:17586523-17586542 Msa1316680:intron 60.0%
GACCCAAGACGTTGCCTCGT+TGG + chr8_4:17587118-17587137 None:intergenic 60.0%
GAGGCAACGTCTTGGGTCGA+TGG - chr8_4:17586491-17586510 Msa1316680:intron 60.0%
CAACGTCTTGGGTCGATGGG+AGG - chr8_4:17586495-17586514 Msa1316680:intron 60.0%
GTCTTGGGTCGATGGGAGGA+GGG - chr8_4:17586499-17586518 Msa1316680:intron 60.0%
TAATGGGGCGGAAAGCTGGC+GGG - chr8_4:17587539-17587558 Msa1316680:intron 60.0%
CAACTGCAGAGGCTTAGCCG+TGG - chr8_4:17587889-17587908 Msa1316680:intron 60.0%
TGCAGAGGCTTAGCCGTGGA+AGG - chr8_4:17587893-17587912 Msa1316680:intron 60.0%
GAACGGAGAGTAAGCCGGCG+AGG + chr8_4:17585883-17585902 None:intergenic 65.0%
!! CGCCGGCTTACTCTCCGTTC+AGG - chr8_4:17585883-17585902 Msa1316680:three_prime_UTR 65.0%
CGTCTTGGGTCGATGGGAGG+AGG - chr8_4:17586498-17586517 Msa1316680:intron 65.0%
ATGGGAGGAGGGACCGAGTC+TGG - chr8_4:17586510-17586529 Msa1316680:intron 65.0%
TGGGAGGAGGGACCGAGTCT+GGG - chr8_4:17586511-17586530 Msa1316680:intron 65.0%
AGGGAGGGAGTCTGAGCCAC+AGG + chr8_4:17586597-17586616 None:intergenic 65.0%
CGTCTTGGGTCGATGGGAGG+AGG - chr8_4:17586498-17586517 Msa1316680:intron 65.0%
GAACGGAGAGTAAGCCGGCG+AGG + chr8_4:17585883-17585902 None:intergenic 65.0%
!! CGCCGGCTTACTCTCCGTTC+AGG - chr8_4:17585883-17585902 Msa1316680:three_prime_UTR 65.0%
CGTCTTGGGTCGATGGGAGG+AGG - chr8_4:17586498-17586517 Msa1316680:intron 65.0%
ATGGGAGGAGGGACCGAGTC+TGG - chr8_4:17586510-17586529 Msa1316680:intron 65.0%
TGGGAGGAGGGACCGAGTCT+GGG - chr8_4:17586511-17586530 Msa1316680:intron 65.0%
AGGGAGGGAGTCTGAGCCAC+AGG + chr8_4:17586597-17586616 None:intergenic 65.0%
CGTCTTGGGTCGATGGGAGG+AGG - chr8_4:17586498-17586517 Msa1316680:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 17585741 17588124 17585741 ID=Msa1316680;Name=Msa1316680
chr8_4 mRNA 17585741 17588124 17585741 ID=Msa1316680-mRNA-1;Parent=Msa1316680;Name=Msa1316680-mRNA-1;_AED=0.13;_eAED=0.13;_QI=236|1|1|1|0.5|0.33|3|203|80
chr8_4 exon 17585741 17586015 17585741 ID=Msa1316680-mRNA-1:exon:6373;Parent=Msa1316680-mRNA-1
chr8_4 exon 17586154 17586334 17586154 ID=Msa1316680-mRNA-1:exon:6372;Parent=Msa1316680-mRNA-1
chr8_4 exon 17587899 17588124 17587899 ID=Msa1316680-mRNA-1:exon:6371;Parent=Msa1316680-mRNA-1
chr8_4 five_prime_UTR 17587899 17588124 17587899 ID=Msa1316680-mRNA-1:five_prime_utr;Parent=Msa1316680-mRNA-1
chr8_4 five_prime_UTR 17586325 17586334 17586325 ID=Msa1316680-mRNA-1:five_prime_utr;Parent=Msa1316680-mRNA-1
chr8_4 CDS 17586154 17586324 17586154 ID=Msa1316680-mRNA-1:cds;Parent=Msa1316680-mRNA-1
chr8_4 CDS 17585944 17586015 17585944 ID=Msa1316680-mRNA-1:cds;Parent=Msa1316680-mRNA-1
chr8_4 three_prime_UTR 17585741 17585943 17585741 ID=Msa1316680-mRNA-1:three_prime_utr;Parent=Msa1316680-mRNA-1
Gene Sequence

>Msa1316680

ATGGGGCGGAAAGCTGGCGGGCTTTTTATCAACTCTAAGAGATTCAGTTCACTTCATAAACCTTGCATGAAGGAAATGATCATGTTTATGAACTGTATGGCTACAAGCCACAGTGATGTTGAAGCATGTGCTAAGCAGAAGGAAATATTAAATACATGTATAGAATCTCAGAGTAAAAAGAACAGAAAGTCTTGGGGGAGTATCAATTATCAACTGCAGAGGCTTAGCCGTGGAAGGAAGTAG
Protein sequence

>Msa1316680

MGRKAGGLFINSKRFSSLHKPCMKEMIMFMNCMATSHSDVEACAKQKEILNTCIESQSKKNRKSWGSINYQLQRLSRGRK*