Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702330 | AET04407.2 | 96.262 | 107 | 4 | 0 | 1 | 107 | 1 | 107 | 8.11e-68 | 210 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702330 | G7L8R7 | 96.262 | 107 | 4 | 0 | 1 | 107 | 1 | 107 | 3.87e-68 | 210 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010490 | Msa0702330 | 0.810725 | 9.992234e-51 | -8.615850e-47 |
| Msa0010500 | Msa0702330 | 0.818301 | 2.104839e-52 | -8.615850e-47 |
| Msa0020390 | Msa0702330 | 0.800029 | 1.745329e-48 | -8.615850e-47 |
| Msa0118540 | Msa0702330 | 0.805109 | 1.564286e-49 | -8.615850e-47 |
| Msa0603570 | Msa0702330 | 0.800112 | 1.678921e-48 | -8.615850e-47 |
| Msa0642970 | Msa0702330 | 0.803665 | 3.127607e-49 | -8.615850e-47 |
| Msa0657870 | Msa0702330 | 0.811539 | 6.654351e-51 | -8.615850e-47 |
| Msa0682680 | Msa0702330 | 0.816161 | 6.377791e-52 | -8.615850e-47 |
| Msa0702330 | Msa0702600 | 0.877433 | 6.309556e-69 | -8.615850e-47 |
| Msa0702330 | Msa0800370 | 0.804801 | 1.814243e-49 | -8.615850e-47 |
| Msa0702330 | Msa0944610 | 0.814148 | 1.785897e-51 | -8.615850e-47 |
| Msa0702330 | Msa1029050 | 0.808065 | 3.718916e-50 | -8.615850e-47 |
| Msa0702330 | Msa1122310 | -0.800346 | 1.504406e-48 | -8.615850e-47 |
| Msa0702330 | Msa1133230 | 0.822490 | 2.303972e-53 | -8.615850e-47 |
| Msa0702330 | Msa1133250 | 0.810823 | 9.514753e-51 | -8.615850e-47 |
| Msa0702330 | Msa1296830 | 0.810221 | 1.284033e-50 | -8.615850e-47 |
| Msa0702330 | Msa1316360 | 0.803774 | 2.969810e-49 | -8.615850e-47 |
| Msa0702330 | Msa1336560 | 0.808087 | 3.678948e-50 | -8.615850e-47 |
| Msa0702330 | Msa1454450 | 0.810748 | 9.879863e-51 | -8.615850e-47 |
| Msa0167980 | Msa0702330 | 0.803126 | 4.046025e-49 | -8.615850e-47 |
| Msa0183850 | Msa0702330 | 0.804051 | 2.601050e-49 | -8.615850e-47 |
| Msa0385500 | Msa0702330 | 0.800271 | 1.558647e-48 | -8.615850e-47 |
| Msa0389210 | Msa0702330 | 0.804653 | 1.948611e-49 | -8.615850e-47 |
| Msa0257490 | Msa0702330 | 0.823115 | 1.647670e-53 | -8.615850e-47 |
| Msa0544840 | Msa0702330 | 0.804874 | 1.751596e-49 | -8.615850e-47 |
| Msa0547160 | Msa0702330 | 0.803787 | 2.951091e-49 | -8.615850e-47 |
| Msa0588260 | Msa0702330 | 0.803782 | 2.957318e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702330 | MtrunA17_Chr8g0380491 | 93.636 | 110 | 7 | 0 | 1 | 110 | 1 | 110 | 1.40e-71 | 209 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702330 | AT1G55365.1 | 49.275 | 69 | 33 | 1 | 1 | 67 | 1 | 69 | 5.06e-16 | 68.9 |
Find 20 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGATGATGCTTCTGCTTC+TGG | 0.168743 | 4_4:+73918052 | Msa0702330:CDS |
| AAAAGCTGATCACTGTTTAT+TGG | 0.179925 | 4_4:-73917896 | None:intergenic |
| AAGAAGATAAGAAGAGTAAA+AGG | 0.234240 | 4_4:-73918005 | None:intergenic |
| AATAAACAGTGATCAGCTTT+TGG | 0.289636 | 4_4:+73917898 | Msa0702330:CDS |
| TAAGAAGAGTAAAAGGAATA+AGG | 0.294983 | 4_4:-73917998 | None:intergenic |
| CCACAAGACAGACAAGAAAA+TGG | 0.358339 | 4_4:+73917796 | Msa0702330:exon |
| CTCACAAATTGCTCTTTACA+AGG | 0.439746 | 4_4:-73921649 | None:intergenic |
| TGTTTCCCTCTTCATCAACT+TGG | 0.458525 | 4_4:+73917932 | Msa0702330:CDS |
| GTGTAGAAATCAAATTATCT+AGG | 0.474489 | 4_4:+73917694 | Msa0702330:five_prime_UTR |
| GAGTAAAAGGAATAAGGTTG+AGG | 0.501247 | 4_4:-73917992 | None:intergenic |
| CACTCATTCTCAAGGAGTCA+AGG | 0.538743 | 4_4:-73917674 | None:intergenic |
| TTATCTAGGTGAGGTGAAGT+AGG | 0.543154 | 4_4:+73917708 | Msa0702330:five_prime_UTR |
| GATTTCTACACTCATTCTCA+AGG | 0.553797 | 4_4:-73917682 | None:intergenic |
| GAAAATGGTGTTAAACACTC+AGG | 0.567582 | 4_4:+73917811 | Msa0702330:exon |
| AGACGACCAAGTTGATGAAG+AGG | 0.585076 | 4_4:-73917938 | None:intergenic |
| GACGACCAAGTTGATGAAGA+GGG | 0.605275 | 4_4:-73917937 | None:intergenic |
| GAGGTGAAGTAGGTAGCAGA+AGG | 0.607950 | 4_4:+73917718 | Msa0702330:five_prime_UTR |
| TGTCTGCACAAACGTGGCAA+TGG | 0.611212 | 4_4:+73917855 | Msa0702330:CDS |
| GAAATCAAATTATCTAGGTG+AGG | 0.614759 | 4_4:+73917699 | Msa0702330:five_prime_UTR |
| CACGTGTGTCTGCACAAACG+TGG | 0.716541 | 4_4:+73917849 | Msa0702330:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAATTAATATAATATCAA+AGG | - | chr4_4:73919226-73919245 | None:intergenic | 10.0% |
| !! | TTTGATATTATATTAATTGA+AGG | + | chr4_4:73919225-73919244 | Msa0702330:intron | 10.0% |
| !! | TCAAAAAAAAAAAGATTTAA+GGG | - | chr4_4:73920600-73920619 | None:intergenic | 10.0% |
| !! | TTCAAAAAAAAAAAGATTTA+AGG | - | chr4_4:73920601-73920620 | None:intergenic | 10.0% |
| !!! | TAAATCTTTTTTTTTTTGAA+CGG | + | chr4_4:73920601-73920620 | Msa0702330:intron | 10.0% |
| !!! | TTTTCTTCATCTTTTTTTAA+TGG | + | chr4_4:73918140-73918159 | Msa0702330:intron | 15.0% |
| !!! | TTTCTTCATCTTTTTTTAAT+GGG | + | chr4_4:73918141-73918160 | Msa0702330:intron | 15.0% |
| !!! | TTATTTTTACATTAATTGAC+TGG | + | chr4_4:73918188-73918207 | Msa0702330:intron | 15.0% |
| !!! | TATTTTTACATTAATTGACT+GGG | + | chr4_4:73918189-73918208 | Msa0702330:intron | 15.0% |
| !! | AGATAATATAAAACAAGTTT+AGG | + | chr4_4:73918535-73918554 | Msa0702330:intron | 15.0% |
| !!! | AAAAAATAGTATTGCTTTTT+AGG | - | chr4_4:73918879-73918898 | None:intergenic | 15.0% |
| !!! | AAAGCAATACTATTTTTTAT+TGG | + | chr4_4:73918881-73918900 | Msa0702330:intron | 15.0% |
| !!! | TTTTTCTTTAATATTTCCAT+TGG | + | chr4_4:73920045-73920064 | Msa0702330:intron | 15.0% |
| !! | AAAATTATGAGTATAATCAT+GGG | + | chr4_4:73920415-73920434 | Msa0702330:intron | 15.0% |
| !! | CAACTTGAATTTAAATAATA+TGG | - | chr4_4:73921166-73921185 | None:intergenic | 15.0% |
| !! | AATTCTTCGTATTGTATATT+TGG | + | chr4_4:73918637-73918656 | Msa0702330:intron | 20.0% |
| !! | AGATTATTAAGAGATCAATT+TGG | + | chr4_4:73918676-73918695 | Msa0702330:intron | 20.0% |
| !! | GTAATGAATAATGTATGTAT+AGG | + | chr4_4:73919103-73919122 | Msa0702330:intron | 20.0% |
| !! | ATATAAAAATGATAGCCTAT+AGG | + | chr4_4:73919276-73919295 | Msa0702330:intron | 20.0% |
| !!! | AGAATTGCTTTCTTATATTT+TGG | + | chr4_4:73919720-73919739 | Msa0702330:intron | 20.0% |
| !!! | GAATTGCTTTCTTATATTTT+GGG | + | chr4_4:73919721-73919740 | Msa0702330:intron | 20.0% |
| !!! | GCAGATTAAAACTTTAAAAT+AGG | - | chr4_4:73919819-73919838 | None:intergenic | 20.0% |
| !! | TATTAAAGAAAAAGTTGGAA+TGG | - | chr4_4:73920038-73920057 | None:intergenic | 20.0% |
| !! | GGAAATATTAAAGAAAAAGT+TGG | - | chr4_4:73920043-73920062 | None:intergenic | 20.0% |
| !! | CAAAATTATGAGTATAATCA+TGG | + | chr4_4:73920414-73920433 | Msa0702330:intron | 20.0% |
| !! | TTAATATTTATTCCTTTGTC+CGG | + | chr4_4:73920649-73920668 | Msa0702330:intron | 20.0% |
| !! | TTATGAGAGAATAAAGAAAT+CGG | + | chr4_4:73921069-73921088 | Msa0702330:intron | 20.0% |
| !! | TGAATTTAAATAATATGGTC+CGG | - | chr4_4:73921161-73921180 | None:intergenic | 20.0% |
| !!! | TAAAAGATGCTTTTATACAA+TGG | - | chr4_4:73921587-73921606 | None:intergenic | 20.0% |
| ! | GTGTAGAAATCAAATTATCT+AGG | + | chr4_4:73917694-73917713 | Msa0702330:five_prime_UTR | 25.0% |
| ! | TAAGAAGAGTAAAAGGAATA+AGG | - | chr4_4:73918001-73918020 | None:intergenic | 25.0% |
| ! | AAGAAGATAAGAAGAGTAAA+AGG | - | chr4_4:73918008-73918027 | None:intergenic | 25.0% |
| !! | TGTTGTTGCTTAATGTTTAT+TGG | + | chr4_4:73918244-73918263 | Msa0702330:intron | 25.0% |
| !! | GTTGTTGCTTAATGTTTATT+GGG | + | chr4_4:73918245-73918264 | Msa0702330:intron | 25.0% |
| ! | ATAGTATTGTTTGATGAACT+TGG | + | chr4_4:73918306-73918325 | Msa0702330:intron | 25.0% |
| !!! | ATACGTTTTGATTTTATCAC+CGG | - | chr4_4:73918497-73918516 | None:intergenic | 25.0% |
| !! | ATTATCTAGAGTAGATAATG+TGG | + | chr4_4:73918704-73918723 | Msa0702330:intron | 25.0% |
| ! | AAAAACTATGAACTTCCTAA+TGG | + | chr4_4:73918750-73918769 | Msa0702330:intron | 25.0% |
| !! | ATTATGATAACTTGTCCATT+AGG | - | chr4_4:73918768-73918787 | None:intergenic | 25.0% |
| ! | AATGGACAAGTTATCATAAT+TGG | + | chr4_4:73918768-73918787 | Msa0702330:intron | 25.0% |
| ! | ATGGACAAGTTATCATAATT+GGG | + | chr4_4:73918769-73918788 | Msa0702330:intron | 25.0% |
| ! | ACTGGGTATAAAAAAAATTG+AGG | + | chr4_4:73918917-73918936 | Msa0702330:intron | 25.0% |
| !!! | TTTGATCCATTTTGGTTTTT+TGG | + | chr4_4:73919041-73919060 | Msa0702330:intron | 25.0% |
| ! | TTATTGTGTGAGTTCTATTT+AGG | + | chr4_4:73919137-73919156 | Msa0702330:intron | 25.0% |
| ! | TTCTATGAATCTTTACCTAT+AGG | - | chr4_4:73919294-73919313 | None:intergenic | 25.0% |
| ! | TTATTCAATGAAGCAAAAAG+AGG | + | chr4_4:73919355-73919374 | Msa0702330:intron | 25.0% |
| ! | AGTGAGAATATTATGTAAGT+AGG | - | chr4_4:73919387-73919406 | None:intergenic | 25.0% |
| !! | ACAAAACCCTAATTAAGTTT+TGG | + | chr4_4:73919424-73919443 | Msa0702330:intron | 25.0% |
| ! | GTACAACCAAAACTTAATTA+GGG | - | chr4_4:73919433-73919452 | None:intergenic | 25.0% |
| ! | TGTACAACCAAAACTTAATT+AGG | - | chr4_4:73919434-73919453 | None:intergenic | 25.0% |
| !! | AACCAAAATCTTTTCACATT+AGG | - | chr4_4:73919488-73919507 | None:intergenic | 25.0% |
| ! | ATCTACTTGGATATAAGAAA+TGG | - | chr4_4:73919577-73919596 | None:intergenic | 25.0% |
| ! | ACTCAAAAGAAAACGATAAA+TGG | - | chr4_4:73919630-73919649 | None:intergenic | 25.0% |
| ! | TAAATAAGAAGCAACTTAGA+TGG | - | chr4_4:73919671-73919690 | None:intergenic | 25.0% |
| !! | AAAAGAGTGTAAAGTTTACT+GGG | - | chr4_4:73919778-73919797 | None:intergenic | 25.0% |
| !! | TAAACTTTACACTCTTTTGT+AGG | + | chr4_4:73919780-73919799 | Msa0702330:intron | 25.0% |
| !!! | TAAAACTTTAAAATAGGAGC+CGG | - | chr4_4:73919813-73919832 | None:intergenic | 25.0% |
| ! | AAGAACTTATGCATCAATTT+GGG | - | chr4_4:73919845-73919864 | None:intergenic | 25.0% |
| ! | AAAGAACTTATGCATCAATT+TGG | - | chr4_4:73919846-73919865 | None:intergenic | 25.0% |
| ! | AAGAGAGTTTAAACATATGA+GGG | - | chr4_4:73919976-73919995 | None:intergenic | 25.0% |
| ! | TAAGAGAGTTTAAACATATG+AGG | - | chr4_4:73919977-73919996 | None:intergenic | 25.0% |
| ! | TCATATGTTTAAACTCTCTT+AGG | + | chr4_4:73919976-73919995 | Msa0702330:intron | 25.0% |
| !! | ATATTTCCATTGGTAATTGT+TGG | + | chr4_4:73920055-73920074 | Msa0702330:intron | 25.0% |
| !! | TAAACCTTGTTATCACATAT+AGG | + | chr4_4:73920198-73920217 | Msa0702330:intron | 25.0% |
| !! | CAAGTCTTTTCCAATTTATT+AGG | - | chr4_4:73920231-73920250 | None:intergenic | 25.0% |
| ! | TAGAAATTCAAATCTTACAG+AGG | - | chr4_4:73920311-73920330 | None:intergenic | 25.0% |
| !!! | ATTTCTAGTTTCTGAAGAAT+AGG | + | chr4_4:73920324-73920343 | Msa0702330:intron | 25.0% |
| ! | AAATGTGAGTCATAATTTGA+AGG | + | chr4_4:73920978-73920997 | Msa0702330:intron | 25.0% |
| !! | AAACATAGTCTTTTATTGCT+CGG | + | chr4_4:73921034-73921053 | Msa0702330:intron | 25.0% |
| ! | AAAAATCAGATAATGCAACT+GGG | - | chr4_4:73921498-73921517 | None:intergenic | 25.0% |
| ! | ATCCAATATCTTCTTTCTAA+TGG | + | chr4_4:73921524-73921543 | Msa0702330:intron | 25.0% |
| ! | ATCCATTAGAAAGAAGATAT+TGG | - | chr4_4:73921529-73921548 | None:intergenic | 25.0% |
| GAAATCAAATTATCTAGGTG+AGG | + | chr4_4:73917699-73917718 | Msa0702330:five_prime_UTR | 30.0% | |
| AAAAGCTGATCACTGTTTAT+TGG | - | chr4_4:73917899-73917918 | None:intergenic | 30.0% | |
| ! | AATAAACAGTGATCAGCTTT+TGG | + | chr4_4:73917898-73917917 | Msa0702330:CDS | 30.0% |
| AATTGTACAATCTGATCTGA+TGG | + | chr4_4:73918349-73918368 | Msa0702330:intron | 30.0% | |
| TTGTCTGATGAACTTTCTAA+CGG | + | chr4_4:73918392-73918411 | Msa0702330:intron | 30.0% | |
| TTCCAACAATTATAGCCTAT+AGG | + | chr4_4:73918421-73918440 | Msa0702330:intron | 30.0% | |
| ! | TTCGTATTGTATATTTGGTG+AGG | + | chr4_4:73918642-73918661 | Msa0702330:intron | 30.0% |
| TGGACAAGTTATCATAATTG+GGG | + | chr4_4:73918770-73918789 | Msa0702330:intron | 30.0% | |
| ATTGGAGATACTATTACTAC+TGG | + | chr4_4:73918899-73918918 | Msa0702330:intron | 30.0% | |
| TTGGAGATACTATTACTACT+GGG | + | chr4_4:73918900-73918919 | Msa0702330:intron | 30.0% | |
| GAACTTCCAAAAAACCAAAA+TGG | - | chr4_4:73919050-73919069 | None:intergenic | 30.0% | |
| !!! | GGTTTTTTGGAAGTTCAAAT+CGG | + | chr4_4:73919054-73919073 | Msa0702330:intron | 30.0% |
| !!! | GTTTTTTGGAAGTTCAAATC+GGG | + | chr4_4:73919055-73919074 | Msa0702330:intron | 30.0% |
| AATGTATGTATAGGATGAGA+TGG | + | chr4_4:73919112-73919131 | Msa0702330:intron | 30.0% | |
| AATTCATGCACATCTAACAA+TGG | - | chr4_4:73919173-73919192 | None:intergenic | 30.0% | |
| ! | AAATCTTTTCACATTAGGTG+AGG | - | chr4_4:73919483-73919502 | None:intergenic | 30.0% |
| ! | CACCTAATGTGAAAAGATTT+TGG | + | chr4_4:73919483-73919502 | Msa0702330:intron | 30.0% |
| !!! | TGAAAAGATTTTGGTTGTAG+TGG | + | chr4_4:73919492-73919511 | Msa0702330:intron | 30.0% |
| ! | TTTAGCTCAACGTACTATAT+TGG | + | chr4_4:73919535-73919554 | Msa0702330:intron | 30.0% |
| !!! | TTTTGGGATTTGCTATCATT+TGG | + | chr4_4:73919737-73919756 | Msa0702330:intron | 30.0% |
| !! | TTTGGGATTTGCTATCATTT+GGG | + | chr4_4:73919738-73919757 | Msa0702330:intron | 30.0% |
| ! | CAAAAGAGTGTAAAGTTTAC+TGG | - | chr4_4:73919779-73919798 | None:intergenic | 30.0% |
| !! | AAAACTTTAAAATAGGAGCC+GGG | - | chr4_4:73919812-73919831 | None:intergenic | 30.0% |
| AGAAAGACTTTAATTCTAGC+AGG | - | chr4_4:73919879-73919898 | None:intergenic | 30.0% | |
| CTGTTCACAAAAAAAGAAGA+AGG | - | chr4_4:73920012-73920031 | None:intergenic | 30.0% | |
| !!! | CTTCTTCTTTTTTTGTGAAC+AGG | + | chr4_4:73920010-73920029 | Msa0702330:intron | 30.0% |
| GAATTTCCAACAATTACCAA+TGG | - | chr4_4:73920064-73920083 | None:intergenic | 30.0% | |
| CTAAGAGGGAATCAAAATTA+AGG | - | chr4_4:73920089-73920108 | None:intergenic | 30.0% | |
| ! | TCTGTGAAAACTACTGTTTT+GGG | - | chr4_4:73920143-73920162 | None:intergenic | 30.0% |
| ! | AGAGTGTCTGTAGATAATAA+GGG | + | chr4_4:73920160-73920179 | Msa0702330:intron | 30.0% |
| ATATATGTCGTATCTTTGTC+TGG | + | chr4_4:73920274-73920293 | Msa0702330:intron | 30.0% | |
| ATTCAAATCTTACAGAGGAT+AGG | - | chr4_4:73920306-73920325 | None:intergenic | 30.0% | |
| TATGAGTATAATCATGGGAT+TGG | + | chr4_4:73920420-73920439 | Msa0702330:intron | 30.0% | |
| !!! | TCATGTTTTTAGTTGTGATC+AGG | - | chr4_4:73920477-73920496 | None:intergenic | 30.0% |
| ACAATTCAACATGACTTCTA+CGG | - | chr4_4:73920501-73920520 | None:intergenic | 30.0% | |
| ACTAAGAATGCATACAGAAA+AGG | - | chr4_4:73920948-73920967 | None:intergenic | 30.0% | |
| ACAACAATAATCTTGCAAAC+CGG | + | chr4_4:73921139-73921158 | Msa0702330:intron | 30.0% | |
| CAAACCTAAGCTTGAATAAT+AGG | + | chr4_4:73921193-73921212 | Msa0702330:intron | 30.0% | |
| CTTTCCTATTATTCAAGCTT+AGG | - | chr4_4:73921200-73921219 | None:intergenic | 30.0% | |
| CTAAGCTTGAATAATAGGAA+AGG | + | chr4_4:73921198-73921217 | Msa0702330:intron | 30.0% | |
| !! | ATTCATTATGTTTTGCTGTG+AGG | + | chr4_4:73921348-73921367 | Msa0702330:intron | 30.0% |
| AAAATCAGATAATGCAACTG+GGG | - | chr4_4:73921497-73921516 | None:intergenic | 30.0% | |
| GAAAAATCAGATAATGCAAC+TGG | - | chr4_4:73921499-73921518 | None:intergenic | 30.0% | |
| ! | AAGATGCTTTTATACAATGG+AGG | - | chr4_4:73921584-73921603 | None:intergenic | 30.0% |
| GATTTCTACACTCATTCTCA+AGG | - | chr4_4:73917685-73917704 | None:intergenic | 35.0% | |
| ! | GAAAATGGTGTTAAACACTC+AGG | + | chr4_4:73917811-73917830 | Msa0702330:exon | 35.0% |
| GAGTAAAAGGAATAAGGTTG+AGG | - | chr4_4:73917995-73918014 | None:intergenic | 35.0% | |
| TGCCTATAGGCTATAATTGT+TGG | - | chr4_4:73918426-73918445 | None:intergenic | 35.0% | |
| AACAATTATAGCCTATAGGC+AGG | + | chr4_4:73918425-73918444 | Msa0702330:intron | 35.0% | |
| ACAATTATAGCCTATAGGCA+GGG | + | chr4_4:73918426-73918445 | Msa0702330:intron | 35.0% | |
| ! | CGAATGAAGACTCTTTTTGA+AGG | - | chr4_4:73918567-73918586 | None:intergenic | 35.0% |
| TTGCTTCAGTAAATACACGT+AGG | - | chr4_4:73918606-73918625 | None:intergenic | 35.0% | |
| ACTTCCATTCCAATCATAGA+TGG | - | chr4_4:73918831-73918850 | None:intergenic | 35.0% | |
| TTGCTGGAATGGAGATATTA+AGG | + | chr4_4:73918850-73918869 | Msa0702330:intron | 35.0% | |
| TGCTGGAATGGAGATATTAA+GGG | + | chr4_4:73918851-73918870 | Msa0702330:intron | 35.0% | |
| ACAATGATTCAGCTACCTAT+AGG | - | chr4_4:73919004-73919023 | None:intergenic | 35.0% | |
| AGCTGAATCATTGTATTAGC+AGG | + | chr4_4:73919010-73919029 | Msa0702330:intron | 35.0% | |
| !! | TGCTAGGTTTTGATCCATTT+TGG | + | chr4_4:73919033-73919052 | Msa0702330:intron | 35.0% |
| ! | ATTGGTCTACTTGGTTAGAT+GGG | + | chr4_4:73919078-73919097 | Msa0702330:intron | 35.0% |
| !!! | CTTAATTAGGGTTTTGTTCG+TGG | - | chr4_4:73919421-73919440 | None:intergenic | 35.0% |
| !! | ACGTACTATATTGGCTTGAA+AGG | + | chr4_4:73919544-73919563 | Msa0702330:intron | 35.0% |
| AGGGTAAGAGAAAATCTACT+TGG | - | chr4_4:73919590-73919609 | None:intergenic | 35.0% | |
| ATAAATGGATCAAGTGAGAC+AGG | - | chr4_4:73919615-73919634 | None:intergenic | 35.0% | |
| ACTTATGCATCAATTTGGGA+GGG | - | chr4_4:73919841-73919860 | None:intergenic | 35.0% | |
| AACTTATGCATCAATTTGGG+AGG | - | chr4_4:73919842-73919861 | None:intergenic | 35.0% | |
| GAGGATAGTACAATAGTTCA+AGG | - | chr4_4:73919909-73919928 | None:intergenic | 35.0% | |
| ! | ATCTAGAAGAGTTGATTAGG+AGG | - | chr4_4:73919934-73919953 | None:intergenic | 35.0% |
| TCCTAATCAACTCTTCTAGA+TGG | + | chr4_4:73919933-73919952 | Msa0702330:intron | 35.0% | |
| CCTAATCAACTCTTCTAGAT+GGG | + | chr4_4:73919934-73919953 | Msa0702330:intron | 35.0% | |
| CTAATCAACTCTTCTAGATG+GGG | + | chr4_4:73919935-73919954 | Msa0702330:intron | 35.0% | |
| AGAGGGAATCAAAATTAAGG+CGG | - | chr4_4:73920086-73920105 | None:intergenic | 35.0% | |
| ! | CTGTGAAAACTACTGTTTTG+GGG | - | chr4_4:73920142-73920161 | None:intergenic | 35.0% |
| ! | CTCTGTGAAAACTACTGTTT+TGG | - | chr4_4:73920144-73920163 | None:intergenic | 35.0% |
| ! | CAGAGTGTCTGTAGATAATA+AGG | + | chr4_4:73920159-73920178 | Msa0702330:intron | 35.0% |
| CACACCTATATGTGATAACA+AGG | - | chr4_4:73920205-73920224 | None:intergenic | 35.0% | |
| ! | CTTGTTATCACATATAGGTG+TGG | + | chr4_4:73920203-73920222 | Msa0702330:intron | 35.0% |
| AGGTGTGGAACCTAATAAAT+TGG | + | chr4_4:73920218-73920237 | Msa0702330:intron | 35.0% | |
| ! | TTCTGAAGAATAGGCTTTAG+TGG | + | chr4_4:73920333-73920352 | Msa0702330:intron | 35.0% |
| ! | TCTGAAGAATAGGCTTTAGT+GGG | + | chr4_4:73920334-73920353 | Msa0702330:intron | 35.0% |
| TTAAGGGATTGAAATGTCAG+AGG | - | chr4_4:73920584-73920603 | None:intergenic | 35.0% | |
| AGATTTAAGGGATTGAGAAG+GGG | - | chr4_4:73920749-73920768 | None:intergenic | 35.0% | |
| CAGATTTAAGGGATTGAGAA+GGG | - | chr4_4:73920750-73920769 | None:intergenic | 35.0% | |
| TCAGATTTAAGGGATTGAGA+AGG | - | chr4_4:73920751-73920770 | None:intergenic | 35.0% | |
| AATGGTTGAGATAGAGATTC+TGG | + | chr4_4:73920798-73920817 | Msa0702330:intron | 35.0% | |
| TTGAAGCAAATCAAACGATG+AGG | - | chr4_4:73920857-73920876 | None:intergenic | 35.0% | |
| ACTCACAGATAAGAACAGAT+TGG | - | chr4_4:73920923-73920942 | None:intergenic | 35.0% | |
| ! | GCATGTTTTCTTTTGAACCA+GGG | + | chr4_4:73921308-73921327 | Msa0702330:intron | 35.0% |
| ! | CATGTTTTCTTTTGAACCAG+GGG | + | chr4_4:73921309-73921328 | Msa0702330:intron | 35.0% |
| CAGGCAAATTCCTATCAAAA+GGG | - | chr4_4:73921418-73921437 | None:intergenic | 35.0% | |
| ACTTCATGAGGATAATTAGC+AGG | - | chr4_4:73921437-73921456 | None:intergenic | 35.0% | |
| AAATGTCACATCACTTCATG+AGG | - | chr4_4:73921449-73921468 | None:intergenic | 35.0% | |
| TCATGAAGTGATGTGACATT+TGG | + | chr4_4:73921448-73921467 | Msa0702330:intron | 35.0% | |
| GTGATTCTTGTGATTCTTGT+AGG | + | chr4_4:73921611-73921630 | Msa0702330:intron | 35.0% | |
| TTATCTAGGTGAGGTGAAGT+AGG | + | chr4_4:73917708-73917727 | Msa0702330:five_prime_UTR | 40.0% | |
| ! | CCATTTTCTTGTCTGTCTTG+TGG | - | chr4_4:73917799-73917818 | None:intergenic | 40.0% |
| CCACAAGACAGACAAGAAAA+TGG | + | chr4_4:73917796-73917815 | Msa0702330:exon | 40.0% | |
| TGTTTCCCTCTTCATCAACT+TGG | + | chr4_4:73917932-73917951 | Msa0702330:CDS | 40.0% | |
| !! | ACAATCTGATCTGATGGACT+TGG | + | chr4_4:73918355-73918374 | Msa0702330:intron | 40.0% |
| TTATCATAATTGGGGCTGAG+AGG | + | chr4_4:73918778-73918797 | Msa0702330:intron | 40.0% | |
| CAATCATAGATGGCTGGAAA+AGG | - | chr4_4:73918821-73918840 | None:intergenic | 40.0% | |
| ! | CTTTTCCAGCCATCTATGAT+TGG | + | chr4_4:73918819-73918838 | Msa0702330:intron | 40.0% |
| ATGATTGGAATGGAAGTTGC+TGG | + | chr4_4:73918834-73918853 | Msa0702330:intron | 40.0% | |
| GCTGGAATGGAGATATTAAG+GGG | + | chr4_4:73918852-73918871 | Msa0702330:intron | 40.0% | |
| CTGGAATGGAGATATTAAGG+GGG | + | chr4_4:73918853-73918872 | Msa0702330:intron | 40.0% | |
| TCATTGTATTAGCAGGTGCT+AGG | + | chr4_4:73919017-73919036 | Msa0702330:intron | 40.0% | |
| TTGGAAGTTCAAATCGGGAT+TGG | + | chr4_4:73919060-73919079 | Msa0702330:intron | 40.0% | |
| !! | GATTGGTCTACTTGGTTAGA+TGG | + | chr4_4:73919077-73919096 | Msa0702330:intron | 40.0% |
| !!! | TAGGGTTTTGTTCGTGGAAA+CGG | - | chr4_4:73919415-73919434 | None:intergenic | 40.0% |
| ! | CATTAGGTGAGGTTAGCTAA+GGG | - | chr4_4:73919472-73919491 | None:intergenic | 40.0% |
| ! | ACATTAGGTGAGGTTAGCTA+AGG | - | chr4_4:73919473-73919492 | None:intergenic | 40.0% |
| !!! | TTTTGGTTGTAGTGGATCTC+TGG | + | chr4_4:73919500-73919519 | Msa0702330:intron | 40.0% |
| !! | TTTGGTTGTAGTGGATCTCT+GGG | + | chr4_4:73919501-73919520 | Msa0702330:intron | 40.0% |
| !! | GGATTTGCTATCATTTGGGA+TGG | + | chr4_4:73919742-73919761 | Msa0702330:intron | 40.0% |
| ! | TTGCTATCATTTGGGATGGA+TGG | + | chr4_4:73919746-73919765 | Msa0702330:intron | 40.0% |
| ! | TAGAAGAGTTGATTAGGAGG+AGG | - | chr4_4:73919931-73919950 | None:intergenic | 40.0% |
| ! | CCCATCTAGAAGAGTTGATT+AGG | - | chr4_4:73919937-73919956 | None:intergenic | 40.0% |
| CTTCTAGATGGGGCTTATAT+TGG | + | chr4_4:73919945-73919964 | Msa0702330:intron | 40.0% | |
| !!! | GAAAACTACTGTTTTGGGGT+TGG | - | chr4_4:73920138-73920157 | None:intergenic | 40.0% |
| !! | GATAATAAGGGTGTCTCTGT+AGG | + | chr4_4:73920172-73920191 | Msa0702330:intron | 40.0% |
| CAGTGTATGCTAAAACTCAG+CGG | - | chr4_4:73920452-73920471 | None:intergenic | 40.0% | |
| AGCTAAGGGTTAAGTAGATG+GGG | - | chr4_4:73920690-73920709 | None:intergenic | 40.0% | |
| GAGCTAAGGGTTAAGTAGAT+GGG | - | chr4_4:73920691-73920710 | None:intergenic | 40.0% | |
| TGAGCTAAGGGTTAAGTAGA+TGG | - | chr4_4:73920692-73920711 | None:intergenic | 40.0% | |
| ATTTAAGGGATTGAGAAGGG+GGG | - | chr4_4:73920747-73920766 | None:intergenic | 40.0% | |
| GATTTAAGGGATTGAGAAGG+GGG | - | chr4_4:73920748-73920767 | None:intergenic | 40.0% | |
| TCAAGAGGGGTCAGATTTAA+GGG | - | chr4_4:73920761-73920780 | None:intergenic | 40.0% | |
| ATCAAGAGGGGTCAGATTTA+AGG | - | chr4_4:73920762-73920781 | None:intergenic | 40.0% | |
| ATTTCCCCATGGCTTCAAAA+TGG | + | chr4_4:73920780-73920799 | Msa0702330:intron | 40.0% | |
| !!! | TCAACCATTTTGAAGCCATG+GGG | - | chr4_4:73920787-73920806 | None:intergenic | 40.0% |
| !!! | CTCAACCATTTTGAAGCCAT+GGG | - | chr4_4:73920788-73920807 | None:intergenic | 40.0% |
| !!! | TCTCAACCATTTTGAAGCCA+TGG | - | chr4_4:73920789-73920808 | None:intergenic | 40.0% |
| GTTGAGATAGAGATTCTGGT+TGG | + | chr4_4:73920802-73920821 | Msa0702330:intron | 40.0% | |
| ! | TTGGTGGTTTGAGTACCTAT+GGG | + | chr4_4:73920821-73920840 | Msa0702330:intron | 40.0% |
| AAAGACTATGTTTGCATGCG+TGG | - | chr4_4:73921027-73921046 | None:intergenic | 40.0% | |
| GCCATCATGACATGAATGTT+GGG | + | chr4_4:73921091-73921110 | Msa0702330:intron | 40.0% | |
| ACCCAACATTCATGTCATGA+TGG | - | chr4_4:73921095-73921114 | None:intergenic | 40.0% | |
| ! | CGCATGTTTTCTTTTGAACC+AGG | + | chr4_4:73921307-73921326 | Msa0702330:intron | 40.0% |
| !! | TTATGTTTTGCTGTGAGGTG+TGG | + | chr4_4:73921353-73921372 | Msa0702330:intron | 40.0% |
| !! | GAGCTTTATGCCCTTTTGAT+AGG | + | chr4_4:73921405-73921424 | Msa0702330:intron | 40.0% |
| GCAGGCAAATTCCTATCAAA+AGG | - | chr4_4:73921419-73921438 | None:intergenic | 40.0% | |
| GTGATGTGACATTTGGATGA+TGG | + | chr4_4:73921455-73921474 | Msa0702330:intron | 40.0% | |
| CACTCATTCTCAAGGAGTCA+AGG | - | chr4_4:73917677-73917696 | None:intergenic | 45.0% | |
| !! | GACGACCAAGTTGATGAAGA+GGG | - | chr4_4:73917940-73917959 | None:intergenic | 45.0% |
| !! | AGACGACCAAGTTGATGAAG+AGG | - | chr4_4:73917941-73917960 | None:intergenic | 45.0% |
| ! | TCTGATGATGCTTCTGCTTC+TGG | + | chr4_4:73918052-73918071 | Msa0702330:CDS | 45.0% |
| ! | ACACGTAGGAAGTCTCGTTT+TGG | - | chr4_4:73918592-73918611 | None:intergenic | 45.0% |
| GGAAAAGGACTTCTAGGCAA+CGG | - | chr4_4:73918806-73918825 | None:intergenic | 45.0% | |
| ATGGCTGGAAAAGGACTTCT+AGG | - | chr4_4:73918812-73918831 | None:intergenic | 45.0% | |
| CCATTCCAATCATAGATGGC+TGG | - | chr4_4:73918827-73918846 | None:intergenic | 45.0% | |
| CCAGCCATCTATGATTGGAA+TGG | + | chr4_4:73918824-73918843 | Msa0702330:intron | 45.0% | |
| TGGAATGGAAGTTGCTGGAA+TGG | + | chr4_4:73918839-73918858 | Msa0702330:intron | 45.0% | |
| AAAATTGAGGCCCATCCTTG+AGG | + | chr4_4:73918930-73918949 | Msa0702330:intron | 45.0% | |
| AAATTGAGGCCCATCCTTGA+GGG | + | chr4_4:73918931-73918950 | Msa0702330:intron | 45.0% | |
| ATTCAGCTACCTATAGGCAG+GGG | - | chr4_4:73918998-73919017 | None:intergenic | 45.0% | |
| GATTCAGCTACCTATAGGCA+GGG | - | chr4_4:73918999-73919018 | None:intergenic | 45.0% | |
| TGATTCAGCTACCTATAGGC+AGG | - | chr4_4:73919000-73919019 | None:intergenic | 45.0% | |
| !! | CAAATCGGGATTGGTCTACT+TGG | + | chr4_4:73919069-73919088 | Msa0702330:intron | 45.0% |
| ! | GTGAGGTTAGCTAAGGGATA+CGG | - | chr4_4:73919466-73919485 | None:intergenic | 45.0% |
| ! | CTCTTTTGTAGGTGAAGACC+CGG | + | chr4_4:73919791-73919810 | Msa0702330:intron | 45.0% |
| ! | AAGAGTTGATTAGGAGGAGG+AGG | - | chr4_4:73919928-73919947 | None:intergenic | 45.0% |
| AATGATGGCAACCGACAAAC+AGG | - | chr4_4:73920115-73920134 | None:intergenic | 45.0% | |
| !!! | CTGTTTTGGGGTTGGAATGA+TGG | - | chr4_4:73920130-73920149 | None:intergenic | 45.0% |
| TTTAGTGGGATGCTGTGATC+TGG | + | chr4_4:73920348-73920367 | Msa0702330:intron | 45.0% | |
| AGGGATTGAAATGTCAGAGG+AGG | - | chr4_4:73920581-73920600 | None:intergenic | 45.0% | |
| GTTAAGTAGATGGGGATCCT+GGG | - | chr4_4:73920682-73920701 | None:intergenic | 45.0% | |
| !! | GCTCAACTGGTTTGAGCTAA+GGG | - | chr4_4:73920704-73920723 | None:intergenic | 45.0% |
| AAGCCATGGGGAAATCAAGA+GGG | - | chr4_4:73920775-73920794 | None:intergenic | 45.0% | |
| ! | GAGATAGAGATTCTGGTTGG+TGG | + | chr4_4:73920805-73920824 | Msa0702330:intron | 45.0% |
| !! | GTTGGTGGTTTGAGTACCTA+TGG | + | chr4_4:73920820-73920839 | Msa0702330:intron | 45.0% |
| TGGTTTGAGTACCTATGGGT+GGG | + | chr4_4:73920825-73920844 | Msa0702330:intron | 45.0% | |
| ACCTCATTTGTGTGTGTGAG+TGG | + | chr4_4:73920879-73920898 | Msa0702330:intron | 45.0% | |
| ACCACTCACACACACAAATG+AGG | - | chr4_4:73920883-73920902 | None:intergenic | 45.0% | |
| GGCCATCATGACATGAATGT+TGG | + | chr4_4:73921090-73921109 | Msa0702330:intron | 45.0% | |
| CATTGTTAGAACATCACCCC+TGG | - | chr4_4:73921328-73921347 | None:intergenic | 45.0% | |
| GAGGTGAAGTAGGTAGCAGA+AGG | + | chr4_4:73917718-73917737 | Msa0702330:five_prime_UTR | 50.0% | |
| TGTCTGCACAAACGTGGCAA+TGG | + | chr4_4:73917855-73917874 | Msa0702330:CDS | 50.0% | |
| TCGGCTCAGGGAATGAAAAG+AGG | + | chr4_4:73918471-73918490 | Msa0702330:intron | 50.0% | |
| CTCAGGGAATGAAAAGAGGC+CGG | + | chr4_4:73918475-73918494 | Msa0702330:intron | 50.0% | |
| GCAAACAGCTCAAACGAGCT+GGG | - | chr4_4:73918960-73918979 | None:intergenic | 50.0% | |
| TGCAAACAGCTCAAACGAGC+TGG | - | chr4_4:73918961-73918980 | None:intergenic | 50.0% | |
| GTTAGCTAAGGGATACGGTC+TGG | - | chr4_4:73919461-73919480 | None:intergenic | 50.0% | |
| GGATCAAGTGAGACAGGAGA+GGG | - | chr4_4:73919609-73919628 | None:intergenic | 50.0% | |
| TGGATCAAGTGAGACAGGAG+AGG | - | chr4_4:73919610-73919629 | None:intergenic | 50.0% | |
| CGACAAACAGGCAGCTAAGA+GGG | - | chr4_4:73920103-73920122 | None:intergenic | 50.0% | |
| CCTCTTAGCTGCCTGTTTGT+CGG | + | chr4_4:73920101-73920120 | Msa0702330:intron | 50.0% | |
| ! | GTGATGTGTAGCCTTGAGTG+TGG | + | chr4_4:73920519-73920538 | Msa0702330:intron | 50.0% |
| CTGGGTTCAAAACCGGACAA+AGG | - | chr4_4:73920664-73920683 | None:intergenic | 50.0% | |
| !!! | CTTTGTCCGGTTTTGAACCC+AGG | + | chr4_4:73920662-73920681 | Msa0702330:intron | 50.0% |
| GGTTAAGTAGATGGGGATCC+TGG | - | chr4_4:73920683-73920702 | None:intergenic | 50.0% | |
| !! | GGCTCAACTGGTTTGAGCTA+AGG | - | chr4_4:73920705-73920724 | None:intergenic | 50.0% |
| AGCCATGGGGAAATCAAGAG+GGG | - | chr4_4:73920774-73920793 | None:intergenic | 50.0% | |
| GAAGCCATGGGGAAATCAAG+AGG | - | chr4_4:73920776-73920795 | None:intergenic | 50.0% | |
| GTGGTTTGAGTACCTATGGG+TGG | + | chr4_4:73920824-73920843 | Msa0702330:intron | 50.0% | |
| TGAGGATATCACCCACCCAT+AGG | - | chr4_4:73920839-73920858 | None:intergenic | 50.0% | |
| CTACCTCTCTGACAGCAAAG+CGG | - | chr4_4:73921232-73921251 | None:intergenic | 50.0% | |
| CACGTGTGTCTGCACAAACG+TGG | + | chr4_4:73917849-73917868 | Msa0702330:CDS | 55.0% | |
| AGCCTCCGAATTCTCAGGGA+CGG | - | chr4_4:73918452-73918471 | None:intergenic | 55.0% | |
| TCCCTGAGAATTCGGAGGCT+CGG | + | chr4_4:73918452-73918471 | Msa0702330:intron | 55.0% | |
| CCGACAAACAGGCAGCTAAG+AGG | - | chr4_4:73920104-73920123 | None:intergenic | 55.0% | |
| AGCCTTGAGTGTGGCATTGC+TGG | + | chr4_4:73920528-73920547 | Msa0702330:intron | 55.0% | |
| GCCTTGAGTGTGGCATTGCT+GGG | + | chr4_4:73920529-73920548 | Msa0702330:intron | 55.0% | |
| TCCCAGCAATGCCACACTCA+AGG | - | chr4_4:73920533-73920552 | None:intergenic | 55.0% | |
| GGGGATCCTGGGTTCAAAAC+CGG | - | chr4_4:73920671-73920690 | None:intergenic | 55.0% | |
| AAGGGATTGAGAAGGGGGGT+GGG | - | chr4_4:73920743-73920762 | None:intergenic | 55.0% | |
| TAAGGGATTGAGAAGGGGGG+TGG | - | chr4_4:73920744-73920763 | None:intergenic | 55.0% | |
| GACCCCTCTTGATTTCCCCA+TGG | + | chr4_4:73920769-73920788 | Msa0702330:intron | 55.0% | |
| CAGGGCCGTCCCTGAGAATT+CGG | + | chr4_4:73918444-73918463 | Msa0702330:intron | 60.0% | |
| GCCGAGCCTCCGAATTCTCA+GGG | - | chr4_4:73918456-73918475 | None:intergenic | 60.0% | |
| AGCCGAGCCTCCGAATTCTC+AGG | - | chr4_4:73918457-73918476 | None:intergenic | 60.0% | |
| AGAATTCGGAGGCTCGGCTC+AGG | + | chr4_4:73918458-73918477 | Msa0702330:intron | 60.0% | |
| GAATTCGGAGGCTCGGCTCA+GGG | + | chr4_4:73918459-73918478 | Msa0702330:intron | 60.0% | |
| TTGAGGCCCATCCTTGAGGG+AGG | + | chr4_4:73918934-73918953 | Msa0702330:intron | 60.0% | |
| TGAGCTGTTTGCACCCCCTC+AGG | + | chr4_4:73918968-73918987 | Msa0702330:intron | 60.0% | |
| GAGCTGTTTGCACCCCCTCA+GGG | + | chr4_4:73918969-73918988 | Msa0702330:intron | 60.0% | |
| TAGGGGTTGGGTGGCTCAAC+TGG | - | chr4_4:73920717-73920736 | None:intergenic | 60.0% | |
| AGGGATTGAGAAGGGGGGTG+GGG | - | chr4_4:73920742-73920761 | None:intergenic | 60.0% | |
| ! | CAGCCGCTTTGCTGTCAGAG+AGG | + | chr4_4:73921226-73921245 | Msa0702330:intron | 60.0% |
| TCAGGGACGGCCCTGCCTAT+AGG | - | chr4_4:73918439-73918458 | None:intergenic | 65.0% | |
| GGCCGTCCCTGAGAATTCGG+AGG | + | chr4_4:73918447-73918466 | Msa0702330:intron | 65.0% | |
| GCTGGGCCTCCCTCAAGGAT+GGG | - | chr4_4:73918943-73918962 | None:intergenic | 65.0% | |
| AGCTGGGCCTCCCTCAAGGA+TGG | - | chr4_4:73918944-73918963 | None:intergenic | 65.0% | |
| AACGAGCTGGGCCTCCCTCA+AGG | - | chr4_4:73918948-73918967 | None:intergenic | 65.0% | |
| !! | ATAGGCAGGGGCGTCCCTGA+GGG | - | chr4_4:73918986-73919005 | None:intergenic | 65.0% |
| !! | TATAGGCAGGGGCGTCCCTG+AGG | - | chr4_4:73918987-73919006 | None:intergenic | 65.0% |
| TCAGGGACGCCCCTGCCTAT+AGG | + | chr4_4:73918986-73919005 | Msa0702330:intron | 65.0% | |
| AGAAGGGGGGTGGGGTGTAG+GGG | - | chr4_4:73920734-73920753 | None:intergenic | 65.0% | |
| GAGAAGGGGGGTGGGGTGTA+GGG | - | chr4_4:73920735-73920754 | None:intergenic | 65.0% | |
| TGAGAAGGGGGGTGGGGTGT+AGG | - | chr4_4:73920736-73920755 | None:intergenic | 65.0% | |
| !! | TAGGCAGGGGCGTCCCTGAG+GGG | - | chr4_4:73918985-73919004 | None:intergenic | 70.0% |
| GGTGGGGTGTAGGGGTTGGG+TGG | - | chr4_4:73920726-73920745 | None:intergenic | 70.0% | |
| GGGGGTGGGGTGTAGGGGTT+GGG | - | chr4_4:73920729-73920748 | None:intergenic | 70.0% | |
| !! | AGGCAGGGGCGTCCCTGAGG+GGG | - | chr4_4:73918984-73919003 | None:intergenic | 75.0% |
| GGGGGGTGGGGTGTAGGGGT+TGG | - | chr4_4:73920730-73920749 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 73917669 | 73921670 | 73917669 | ID=Msa0702330;Name=Msa0702330 |
| chr4_4 | mRNA | 73917669 | 73921670 | 73917669 | ID=Msa0702330-mRNA-1;Parent=Msa0702330;Name=Msa0702330-mRNA-1;_AED=0.19;_eAED=0.25;_QI=146|0|0.5|1|1|1|2|0|118 |
| chr4_4 | exon | 73917669 | 73918133 | 73917669 | ID=Msa0702330-mRNA-1:exon:22866;Parent=Msa0702330-mRNA-1 |
| chr4_4 | exon | 73921633 | 73921670 | 73921633 | ID=Msa0702330-mRNA-1:exon:22867;Parent=Msa0702330-mRNA-1 |
| chr4_4 | five_prime_UTR | 73917669 | 73917814 | 73917669 | ID=Msa0702330-mRNA-1:five_prime_utr;Parent=Msa0702330-mRNA-1 |
| chr4_4 | CDS | 73917815 | 73918133 | 73917815 | ID=Msa0702330-mRNA-1:cds;Parent=Msa0702330-mRNA-1 |
| chr4_4 | CDS | 73921633 | 73921670 | 73921633 | ID=Msa0702330-mRNA-1:cds;Parent=Msa0702330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
