Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706270 | XP_013446930.1 | 97.099 | 517 | 3 | 1 | 1 | 517 | 1 | 505 | 0.0 | 1031 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706270 | sp|Q9FI43|MAPC2_ARATH | 75.051 | 489 | 103 | 4 | 31 | 517 | 16 | 487 | 0.0 | 757 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706270 | A0A072TU61 | 97.099 | 517 | 3 | 1 | 1 | 517 | 1 | 505 | 0.0 | 1031 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007810 | Msa0706270 | -0.813750 | 2.185345e-51 | -8.615850e-47 |
| Msa0011060 | Msa0706270 | -0.817357 | 3.439243e-52 | -8.615850e-47 |
| Msa0011100 | Msa0706270 | -0.810246 | 1.267738e-50 | -8.615850e-47 |
| Msa0056230 | Msa0706270 | -0.809855 | 1.539772e-50 | -8.615850e-47 |
| Msa0610240 | Msa0706270 | -0.819362 | 1.208561e-52 | -8.615850e-47 |
| Msa0620080 | Msa0706270 | 0.848305 | 6.672911e-60 | -8.615850e-47 |
| Msa0658520 | Msa0706270 | -0.811999 | 5.284794e-51 | -8.615850e-47 |
| Msa0660150 | Msa0706270 | 0.865366 | 6.221424e-65 | -8.615850e-47 |
| Msa0672950 | Msa0706270 | 0.821081 | 4.880280e-53 | -8.615850e-47 |
| Msa0672980 | Msa0706270 | 0.826358 | 2.834051e-54 | -8.615850e-47 |
| Msa0703430 | Msa0706270 | -0.821680 | 3.550641e-53 | -8.615850e-47 |
| Msa0706270 | Msa0726170 | -0.809808 | 1.575728e-50 | -8.615850e-47 |
| Msa0706270 | Msa0805390 | 0.823928 | 1.063702e-53 | -8.615850e-47 |
| Msa0706270 | Msa0807870 | -0.802922 | 4.456660e-49 | -8.615850e-47 |
| Msa0706270 | Msa0967900 | -0.804137 | 2.495047e-49 | -8.615850e-47 |
| Msa0706270 | Msa1002970 | -0.823107 | 1.655357e-53 | -8.615850e-47 |
| Msa0706270 | Msa1014550 | -0.817484 | 3.220289e-52 | -8.615850e-47 |
| Msa0706270 | Msa1039440 | -0.825933 | 3.577767e-54 | -8.615850e-47 |
| Msa0706270 | Msa1055520 | -0.806858 | 6.707008e-50 | -8.615850e-47 |
| Msa0706270 | Msa1078760 | -0.802353 | 5.840426e-49 | -8.615850e-47 |
| Msa0706270 | Msa1088400 | -0.843297 | 1.528110e-58 | -8.615850e-47 |
| Msa0706270 | Msa1093190 | -0.823001 | 1.752333e-53 | -8.615850e-47 |
| Msa0706270 | Msa1146980 | 0.800125 | 1.668756e-48 | -8.615850e-47 |
| Msa0706270 | Msa1165460 | 0.821553 | 3.798311e-53 | -8.615850e-47 |
| Msa0706270 | Msa1197720 | 0.810107 | 1.358407e-50 | -8.615850e-47 |
| Msa0706270 | Msa1251410 | 0.815950 | 7.107761e-52 | -8.615850e-47 |
| Msa0706270 | Msa1352600 | -0.826573 | 2.519624e-54 | -8.615850e-47 |
| Msa0706270 | Msa1384410 | -0.807337 | 5.310505e-50 | -8.615850e-47 |
| Msa0706270 | Msa1402300 | 0.818766 | 1.651480e-52 | -8.615850e-47 |
| Msa0706270 | Msa1457770 | 0.823333 | 1.465430e-53 | -8.615850e-47 |
| Msa0173600 | Msa0706270 | -0.817982 | 2.486110e-52 | -8.615850e-47 |
| Msa0216150 | Msa0706270 | -0.811383 | 7.194357e-51 | -8.615850e-47 |
| Msa0225070 | Msa0706270 | -0.803873 | 2.831341e-49 | -8.615850e-47 |
| Msa0384590 | Msa0706270 | 0.819171 | 1.336110e-52 | -8.615850e-47 |
| Msa0434660 | Msa0706270 | 0.801467 | 8.880495e-49 | -8.615850e-47 |
| Msa0522540 | Msa0706270 | 0.815816 | 7.616029e-52 | -8.615850e-47 |
| Msa0570180 | Msa0706270 | 0.825252 | 5.186226e-54 | -8.615850e-47 |
| Msa0600350 | Msa0706270 | 0.807639 | 4.581958e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706270 | MtrunA17_Chr8g0385571 | 97.099 | 517 | 3 | 1 | 1 | 517 | 1 | 505 | 0.0 | 1031 |
| Msa0706270 | MtrunA17_Chr3g0131501 | 78.054 | 483 | 94 | 1 | 35 | 517 | 13 | 483 | 0.0 | 795 |
| Msa0706270 | MtrunA17_Chr7g0252401 | 71.575 | 489 | 120 | 3 | 31 | 517 | 11 | 482 | 0.0 | 738 |
| Msa0706270 | MtrunA17_Chr5g0396801 | 38.436 | 307 | 162 | 8 | 237 | 517 | 36 | 341 | 1.43e-59 | 200 |
| Msa0706270 | MtrunA17_Chr8g0347451 | 36.013 | 311 | 166 | 8 | 237 | 517 | 49 | 356 | 1.04e-58 | 198 |
| Msa0706270 | MtrunA17_Chr3g0137941 | 37.410 | 278 | 170 | 2 | 237 | 514 | 120 | 393 | 1.12e-53 | 186 |
| Msa0706270 | MtrunA17_Chr1g0149111 | 38.129 | 278 | 168 | 2 | 237 | 514 | 137 | 410 | 1.37e-53 | 186 |
| Msa0706270 | MtrunA17_Chr4g0063561 | 38.351 | 279 | 166 | 4 | 237 | 514 | 121 | 394 | 4.90e-53 | 184 |
| Msa0706270 | MtrunA17_Chr4g0063561 | 27.304 | 293 | 180 | 9 | 232 | 512 | 24 | 295 | 1.16e-20 | 94.0 |
| Msa0706270 | MtrunA17_Chr3g0135861 | 32.237 | 304 | 173 | 7 | 239 | 516 | 35 | 331 | 3.90e-47 | 167 |
| Msa0706270 | MtrunA17_Chr6g0488081 | 32.258 | 310 | 187 | 6 | 223 | 514 | 2 | 306 | 4.67e-45 | 160 |
| Msa0706270 | MtrunA17_Chr6g0488081 | 33.166 | 199 | 120 | 4 | 330 | 517 | 16 | 212 | 2.24e-25 | 106 |
| Msa0706270 | MtrunA17_Chr7g0240341 | 32.119 | 302 | 169 | 7 | 239 | 515 | 25 | 315 | 3.42e-44 | 158 |
| Msa0706270 | MtrunA17_Chr7g0240341 | 30.693 | 202 | 125 | 4 | 323 | 512 | 15 | 213 | 3.61e-23 | 100 |
| Msa0706270 | MtrunA17_Chr7g0240341 | 27.753 | 227 | 150 | 5 | 199 | 418 | 98 | 317 | 1.70e-19 | 89.4 |
| Msa0706270 | MtrunA17_Chr2g0296061 | 30.820 | 305 | 171 | 7 | 241 | 508 | 17 | 318 | 6.42e-39 | 144 |
| Msa0706270 | MtrunA17_Chr2g0296061 | 31.088 | 193 | 116 | 3 | 335 | 512 | 17 | 207 | 1.07e-21 | 96.3 |
| Msa0706270 | MtrunA17_Chr2g0296061 | 26.341 | 205 | 127 | 6 | 232 | 413 | 119 | 322 | 1.77e-13 | 71.6 |
| Msa0706270 | MtrunA17_Chr5g0436041 | 32.423 | 293 | 176 | 7 | 239 | 514 | 34 | 321 | 1.28e-36 | 138 |
| Msa0706270 | MtrunA17_Chr5g0436041 | 33.696 | 184 | 112 | 5 | 238 | 414 | 140 | 320 | 1.11e-15 | 78.2 |
| Msa0706270 | MtrunA17_Chr5g0436041 | 33.000 | 200 | 115 | 6 | 326 | 512 | 27 | 220 | 1.41e-15 | 77.8 |
| Msa0706270 | MtrunA17_Chr4g0067231 | 29.936 | 314 | 178 | 7 | 241 | 515 | 16 | 326 | 3.03e-36 | 137 |
| Msa0706270 | MtrunA17_Chr4g0067231 | 25.728 | 206 | 129 | 6 | 231 | 413 | 119 | 323 | 1.12e-13 | 72.4 |
| Msa0706270 | MtrunA17_Chr7g0269701 | 32.646 | 291 | 171 | 8 | 241 | 514 | 24 | 306 | 2.34e-35 | 134 |
| Msa0706270 | MtrunA17_Chr4g0006851 | 31.818 | 286 | 165 | 7 | 239 | 512 | 89 | 356 | 2.60e-35 | 135 |
| Msa0706270 | MtrunA17_Chr4g0006851 | 30.814 | 172 | 104 | 5 | 349 | 514 | 105 | 267 | 2.56e-16 | 80.9 |
| Msa0706270 | MtrunA17_Chr7g0242311 | 29.412 | 272 | 168 | 7 | 250 | 512 | 98 | 354 | 2.05e-33 | 130 |
| Msa0706270 | MtrunA17_Chr7g0242311 | 32.749 | 171 | 102 | 3 | 349 | 514 | 103 | 265 | 5.96e-20 | 91.7 |
| Msa0706270 | MtrunA17_Chr7g0242311 | 25.862 | 174 | 122 | 2 | 241 | 414 | 189 | 355 | 7.84e-17 | 82.4 |
| Msa0706270 | MtrunA17_Chr3g0115801 | 33.775 | 302 | 172 | 7 | 236 | 517 | 113 | 406 | 5.00e-33 | 130 |
| Msa0706270 | MtrunA17_Chr3g0115801 | 25.269 | 186 | 131 | 3 | 328 | 513 | 111 | 288 | 5.89e-12 | 67.4 |
| Msa0706270 | MtrunA17_Chr1g0195101 | 31.317 | 281 | 168 | 7 | 251 | 514 | 31 | 303 | 1.43e-32 | 126 |
| Msa0706270 | MtrunA17_Chr8g0372531 | 34.875 | 281 | 161 | 7 | 255 | 516 | 30 | 307 | 5.68e-32 | 125 |
| Msa0706270 | MtrunA17_Chr4g0000261 | 29.276 | 304 | 169 | 10 | 237 | 511 | 64 | 350 | 1.83e-31 | 124 |
| Msa0706270 | MtrunA17_Chr4g0000261 | 28.235 | 170 | 114 | 3 | 249 | 414 | 187 | 352 | 7.93e-12 | 67.0 |
| Msa0706270 | MtrunA17_Chr8g0382201 | 32.039 | 309 | 180 | 10 | 230 | 517 | 186 | 485 | 1.93e-31 | 127 |
| Msa0706270 | MtrunA17_Chr3g0135801 | 26.885 | 305 | 199 | 6 | 230 | 516 | 25 | 323 | 1.21e-30 | 121 |
| Msa0706270 | MtrunA17_Chr6g0488341 | 30.081 | 246 | 148 | 6 | 275 | 514 | 4 | 231 | 4.97e-29 | 115 |
| Msa0706270 | MtrunA17_Chr4g0004571 | 27.798 | 277 | 191 | 5 | 237 | 508 | 14 | 286 | 3.23e-27 | 111 |
| Msa0706270 | MtrunA17_Chr4g0004571 | 28.497 | 193 | 122 | 7 | 329 | 514 | 11 | 194 | 7.73e-12 | 66.2 |
| Msa0706270 | MtrunA17_Chr5g0423111 | 32.740 | 281 | 164 | 9 | 251 | 514 | 33 | 305 | 2.07e-26 | 110 |
| Msa0706270 | MtrunA17_Chr5g0423111 | 28.947 | 190 | 114 | 6 | 251 | 425 | 131 | 314 | 2.72e-12 | 68.2 |
| Msa0706270 | MtrunA17_Chr8g0393031 | 27.143 | 280 | 184 | 6 | 239 | 502 | 18 | 293 | 4.26e-25 | 105 |
| Msa0706270 | MtrunA17_Chr1g0200171 | 22.511 | 462 | 319 | 12 | 57 | 515 | 360 | 785 | 1.29e-24 | 108 |
| Msa0706270 | MtrunA17_Chr3g0086811 | 27.864 | 323 | 196 | 8 | 226 | 515 | 14 | 332 | 1.53e-24 | 105 |
| Msa0706270 | MtrunA17_Chr6g0463041 | 29.091 | 220 | 114 | 4 | 333 | 514 | 25 | 240 | 1.96e-23 | 99.4 |
| Msa0706270 | MtrunA17_Chr8g0386871 | 26.644 | 289 | 202 | 4 | 230 | 517 | 311 | 590 | 3.29e-22 | 100 |
| Msa0706270 | MtrunA17_Chr5g0431531 | 29.000 | 300 | 187 | 11 | 226 | 511 | 24 | 311 | 1.41e-21 | 95.9 |
| Msa0706270 | MtrunA17_Chr5g0431531 | 28.962 | 183 | 122 | 2 | 333 | 515 | 39 | 213 | 5.41e-20 | 91.3 |
| Msa0706270 | MtrunA17_Chr6g0463351 | 28.464 | 267 | 170 | 7 | 255 | 511 | 83 | 338 | 5.00e-21 | 94.7 |
| Msa0706270 | MtrunA17_Chr2g0331771 | 27.915 | 283 | 198 | 3 | 237 | 515 | 154 | 434 | 1.59e-20 | 94.0 |
| Msa0706270 | MtrunA17_Chr1g0201361 | 28.417 | 278 | 171 | 7 | 240 | 514 | 52 | 304 | 1.62e-20 | 92.4 |
| Msa0706270 | MtrunA17_Chr3g0088301 | 28.028 | 289 | 170 | 9 | 239 | 502 | 93 | 368 | 2.73e-20 | 92.8 |
| Msa0706270 | MtrunA17_Chr8g0383321 | 29.032 | 279 | 168 | 7 | 240 | 514 | 53 | 305 | 1.10e-19 | 90.1 |
| Msa0706270 | MtrunA17_Chr1g0205941 | 29.431 | 299 | 172 | 13 | 241 | 513 | 13 | 298 | 1.87e-18 | 86.3 |
| Msa0706270 | MtrunA17_Chr8g0352031 | 26.667 | 285 | 180 | 7 | 239 | 502 | 68 | 344 | 1.90e-18 | 87.0 |
| Msa0706270 | MtrunA17_Chr4g0008061 | 28.231 | 294 | 178 | 10 | 239 | 512 | 15 | 295 | 7.92e-18 | 84.3 |
| Msa0706270 | MtrunA17_Chr1g0196921 | 30.168 | 179 | 113 | 5 | 322 | 493 | 4 | 177 | 1.58e-17 | 83.6 |
| Msa0706270 | MtrunA17_Chr1g0196921 | 24.468 | 282 | 195 | 6 | 244 | 512 | 19 | 295 | 1.89e-16 | 80.1 |
| Msa0706270 | MtrunA17_Chr5g0436571 | 26.296 | 270 | 155 | 10 | 278 | 510 | 53 | 315 | 2.08e-17 | 83.6 |
| Msa0706270 | MtrunA17_Chr8g0366791 | 26.578 | 301 | 180 | 7 | 241 | 514 | 11 | 297 | 2.74e-17 | 82.4 |
| Msa0706270 | MtrunA17_Chr8g0366791 | 28.426 | 197 | 121 | 7 | 333 | 514 | 9 | 200 | 1.36e-13 | 71.6 |
| Msa0706270 | MtrunA17_Chr4g0040341 | 27.465 | 284 | 178 | 9 | 239 | 502 | 75 | 350 | 3.77e-17 | 83.2 |
| Msa0706270 | MtrunA17_Chr5g0411411 | 26.910 | 301 | 189 | 8 | 236 | 514 | 6 | 297 | 4.26e-16 | 79.0 |
| Msa0706270 | MtrunA17_Chr2g0328891 | 27.500 | 280 | 183 | 7 | 239 | 502 | 66 | 341 | 5.99e-16 | 79.3 |
| Msa0706270 | MtrunA17_Chr7g0275411 | 25.098 | 255 | 171 | 7 | 278 | 515 | 85 | 336 | 1.87e-15 | 77.8 |
| Msa0706270 | MtrunA17_Chr2g0293621 | 26.174 | 298 | 195 | 11 | 235 | 512 | 25 | 317 | 3.29e-15 | 77.0 |
| Msa0706270 | MtrunA17_Chr2g0293621 | 27.411 | 197 | 126 | 3 | 236 | 415 | 123 | 319 | 3.18e-13 | 70.9 |
| Msa0706270 | MtrunA17_Chr7g0241521 | 26.846 | 298 | 177 | 9 | 239 | 512 | 17 | 297 | 3.64e-15 | 76.3 |
| Msa0706270 | MtrunA17_Chr1g0163521 | 25.168 | 298 | 166 | 10 | 272 | 516 | 64 | 357 | 1.34e-14 | 75.5 |
| Msa0706270 | MtrunA17_Chr4g0028531 | 23.841 | 302 | 212 | 8 | 221 | 510 | 4 | 299 | 2.93e-14 | 73.9 |
| Msa0706270 | MtrunA17_Chr6g0455381 | 23.377 | 308 | 208 | 8 | 226 | 512 | 4 | 304 | 3.95e-14 | 73.6 |
| Msa0706270 | MtrunA17_Chr6g0455381 | 26.857 | 175 | 121 | 4 | 345 | 514 | 29 | 201 | 5.18e-13 | 70.1 |
| Msa0706270 | MtrunA17_Chr6g0488171 | 33.663 | 101 | 65 | 1 | 416 | 514 | 2 | 102 | 8.16e-14 | 67.8 |
| Msa0706270 | MtrunA17_Chr7g0219891 | 22.549 | 306 | 195 | 9 | 235 | 512 | 17 | 308 | 2.36e-13 | 71.2 |
| Msa0706270 | MtrunA17_Chr7g0219891 | 28.571 | 210 | 127 | 7 | 226 | 417 | 108 | 312 | 1.02e-12 | 69.3 |
| Msa0706270 | MtrunA17_Chr4g0051841 | 23.404 | 282 | 197 | 9 | 239 | 511 | 29 | 300 | 2.68e-13 | 70.9 |
| Msa0706270 | MtrunA17_Chr6g0461981 | 28.436 | 211 | 142 | 5 | 240 | 444 | 64 | 271 | 4.45e-13 | 70.9 |
| Msa0706270 | MtrunA17_Chr6g0461981 | 25.281 | 178 | 122 | 4 | 336 | 510 | 66 | 235 | 6.93e-11 | 63.9 |
| Msa0706270 | MtrunA17_Chr5g0407451 | 26.286 | 175 | 119 | 4 | 336 | 509 | 23 | 188 | 1.04e-12 | 68.9 |
| Msa0706270 | MtrunA17_Chr4g0046981 | 28.571 | 189 | 122 | 4 | 335 | 514 | 14 | 198 | 1.20e-12 | 68.9 |
| Msa0706270 | MtrunA17_Chr1g0196161 | 28.889 | 180 | 123 | 4 | 339 | 517 | 3 | 178 | 1.69e-12 | 66.2 |
| Msa0706270 | MtrunA17_Chr7g0251981 | 30.734 | 218 | 136 | 7 | 241 | 447 | 83 | 296 | 2.71e-12 | 68.6 |
| Msa0706270 | MtrunA17_Chr3g0103681 | 24.839 | 310 | 185 | 9 | 231 | 512 | 7 | 296 | 5.92e-12 | 66.6 |
| Msa0706270 | MtrunA17_Chr8g0385891 | 27.602 | 221 | 139 | 6 | 241 | 447 | 74 | 287 | 8.11e-12 | 66.6 |
| Msa0706270 | MtrunA17_Chr8g0385891 | 28.042 | 189 | 113 | 7 | 329 | 510 | 73 | 245 | 2.07e-11 | 65.5 |
| Msa0706270 | MtrunA17_Chr1g0157131 | 28.205 | 156 | 90 | 4 | 56 | 206 | 380 | 518 | 9.66e-12 | 67.4 |
| Msa0706270 | MtrunA17_Chr3g0126331 | 23.846 | 260 | 175 | 7 | 276 | 515 | 132 | 388 | 1.44e-11 | 66.2 |
| Msa0706270 | MtrunA17_Chr5g0416661 | 27.241 | 290 | 182 | 10 | 241 | 510 | 13 | 293 | 1.68e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0706270 | AT5G51050.1 | 72.603 | 511 | 121 | 4 | 9 | 517 | 5 | 498 | 0.0 | 760 |
| Msa0706270 | AT5G07320.1 | 73.306 | 487 | 110 | 3 | 31 | 517 | 13 | 479 | 0.0 | 739 |
| Msa0706270 | AT5G61810.1 | 67.076 | 489 | 139 | 5 | 30 | 517 | 11 | 478 | 0.0 | 682 |
| Msa0706270 | AT5G61810.2 | 70.640 | 344 | 91 | 4 | 175 | 517 | 1 | 335 | 8.17e-178 | 503 |
| Msa0706270 | AT4G01100.1 | 38.462 | 312 | 157 | 8 | 237 | 517 | 40 | 347 | 1.14e-62 | 209 |
| Msa0706270 | AT4G01100.2 | 35.411 | 353 | 169 | 11 | 216 | 517 | 17 | 361 | 7.61e-60 | 202 |
| Msa0706270 | AT4G01100.3 | 38.333 | 300 | 150 | 8 | 249 | 517 | 2 | 297 | 5.61e-59 | 197 |
| Msa0706270 | AT4G01100.3 | 25.714 | 175 | 125 | 1 | 342 | 511 | 1 | 175 | 1.85e-18 | 86.7 |
| Msa0706270 | AT4G01100.3 | 28.846 | 208 | 120 | 6 | 241 | 422 | 97 | 302 | 3.55e-14 | 73.9 |
| Msa0706270 | AT4G32400.1 | 36.918 | 279 | 170 | 3 | 237 | 514 | 112 | 385 | 2.10e-52 | 183 |
| Msa0706270 | AT4G32400.1 | 30.366 | 191 | 130 | 3 | 226 | 414 | 195 | 384 | 9.33e-18 | 85.9 |
| Msa0706270 | AT3G53940.1 | 35.274 | 292 | 171 | 6 | 239 | 515 | 73 | 361 | 7.55e-46 | 164 |
| Msa0706270 | AT3G53940.1 | 32.367 | 207 | 126 | 6 | 314 | 511 | 57 | 258 | 2.62e-21 | 95.9 |
| Msa0706270 | AT3G53940.1 | 29.060 | 234 | 133 | 6 | 188 | 414 | 152 | 359 | 6.78e-21 | 94.7 |
| Msa0706270 | AT4G26180.1 | 31.229 | 301 | 180 | 6 | 236 | 516 | 18 | 311 | 1.20e-44 | 160 |
| Msa0706270 | AT3G55640.1 | 34.114 | 299 | 173 | 9 | 231 | 511 | 30 | 322 | 2.31e-43 | 157 |
| Msa0706270 | AT3G55640.1 | 30.288 | 208 | 122 | 7 | 320 | 512 | 25 | 224 | 1.39e-19 | 90.5 |
| Msa0706270 | AT3G55640.4 | 34.114 | 299 | 173 | 9 | 231 | 511 | 30 | 322 | 2.31e-43 | 157 |
| Msa0706270 | AT3G55640.4 | 30.288 | 208 | 122 | 7 | 320 | 512 | 25 | 224 | 1.39e-19 | 90.5 |
| Msa0706270 | AT1G14560.1 | 31.930 | 285 | 166 | 8 | 250 | 511 | 38 | 317 | 7.85e-41 | 150 |
| Msa0706270 | AT1G14560.1 | 29.412 | 187 | 111 | 4 | 344 | 514 | 38 | 219 | 1.42e-19 | 90.5 |
| Msa0706270 | AT2G37890.1 | 31.757 | 296 | 174 | 6 | 239 | 514 | 45 | 332 | 2.91e-40 | 149 |
| Msa0706270 | AT2G37890.1 | 34.518 | 197 | 118 | 4 | 324 | 511 | 36 | 230 | 1.20e-24 | 105 |
| Msa0706270 | AT2G37890.1 | 35.326 | 184 | 109 | 5 | 238 | 414 | 151 | 331 | 6.10e-24 | 103 |
| Msa0706270 | AT4G26180.2 | 30.634 | 284 | 164 | 6 | 236 | 496 | 18 | 291 | 5.64e-39 | 144 |
| Msa0706270 | AT4G26180.2 | 32.663 | 199 | 115 | 4 | 330 | 514 | 18 | 211 | 3.56e-25 | 105 |
| Msa0706270 | AT3G21390.1 | 30.293 | 307 | 172 | 7 | 241 | 508 | 21 | 324 | 1.49e-35 | 135 |
| Msa0706270 | AT3G21390.1 | 29.319 | 191 | 120 | 3 | 335 | 512 | 21 | 209 | 4.42e-20 | 92.0 |
| Msa0706270 | AT3G21390.2 | 30.293 | 307 | 172 | 7 | 241 | 508 | 43 | 346 | 1.62e-35 | 136 |
| Msa0706270 | AT3G21390.2 | 29.319 | 191 | 120 | 3 | 335 | 512 | 43 | 231 | 5.23e-20 | 92.0 |
| Msa0706270 | AT1G14560.2 | 31.111 | 270 | 158 | 8 | 250 | 496 | 38 | 302 | 8.20e-35 | 133 |
| Msa0706270 | AT1G14560.2 | 29.412 | 187 | 111 | 4 | 344 | 514 | 38 | 219 | 8.32e-20 | 90.5 |
| Msa0706270 | AT5G64970.1 | 31.562 | 320 | 185 | 8 | 221 | 517 | 117 | 425 | 3.21e-34 | 134 |
| Msa0706270 | AT5G66380.1 | 33.677 | 291 | 174 | 6 | 241 | 514 | 12 | 300 | 3.48e-34 | 131 |
| Msa0706270 | AT3G51870.1 | 30.515 | 272 | 165 | 7 | 250 | 512 | 102 | 358 | 4.17e-34 | 133 |
| Msa0706270 | AT3G51870.1 | 30.409 | 171 | 106 | 3 | 349 | 514 | 107 | 269 | 1.44e-17 | 85.1 |
| Msa0706270 | AT3G51870.1 | 26.136 | 176 | 119 | 3 | 241 | 414 | 193 | 359 | 3.17e-14 | 74.7 |
| Msa0706270 | AT5G01500.1 | 31.868 | 273 | 160 | 9 | 250 | 512 | 130 | 386 | 3.08e-33 | 131 |
| Msa0706270 | AT5G01500.1 | 32.749 | 171 | 102 | 3 | 349 | 514 | 135 | 297 | 1.34e-19 | 91.7 |
| Msa0706270 | AT5G01500.1 | 29.310 | 174 | 116 | 2 | 241 | 414 | 221 | 387 | 2.61e-13 | 72.4 |
| Msa0706270 | AT5G64970.2 | 32.226 | 301 | 170 | 8 | 240 | 517 | 12 | 301 | 1.06e-32 | 127 |
| Msa0706270 | AT5G48970.1 | 29.545 | 308 | 174 | 8 | 241 | 508 | 24 | 328 | 2.16e-32 | 127 |
| Msa0706270 | AT5G48970.1 | 31.088 | 193 | 116 | 4 | 335 | 512 | 24 | 214 | 1.53e-20 | 93.2 |
| Msa0706270 | AT5G48970.1 | 26.190 | 210 | 124 | 6 | 232 | 413 | 126 | 332 | 1.39e-14 | 75.5 |
| Msa0706270 | AT3G20240.1 | 28.990 | 307 | 178 | 7 | 234 | 514 | 47 | 339 | 1.74e-29 | 119 |
| Msa0706270 | AT2G47490.1 | 31.522 | 276 | 173 | 6 | 251 | 514 | 29 | 300 | 1.18e-28 | 116 |
| Msa0706270 | AT5G56450.1 | 26.073 | 303 | 198 | 6 | 234 | 515 | 29 | 326 | 1.41e-28 | 116 |
| Msa0706270 | AT1G78180.1 | 30.693 | 303 | 186 | 5 | 233 | 517 | 122 | 418 | 1.67e-28 | 117 |
| Msa0706270 | AT3G53940.2 | 35.321 | 218 | 125 | 5 | 239 | 443 | 73 | 287 | 2.42e-28 | 114 |
| Msa0706270 | AT3G53940.2 | 32.367 | 207 | 126 | 6 | 314 | 511 | 57 | 258 | 5.97e-22 | 96.7 |
| Msa0706270 | AT3G55640.2 | 34.061 | 229 | 129 | 7 | 231 | 443 | 30 | 252 | 4.35e-28 | 113 |
| Msa0706270 | AT3G55640.2 | 30.288 | 208 | 122 | 7 | 320 | 512 | 25 | 224 | 1.90e-20 | 91.3 |
| Msa0706270 | AT3G55640.3 | 34.061 | 229 | 129 | 7 | 231 | 443 | 30 | 252 | 4.35e-28 | 113 |
| Msa0706270 | AT3G55640.3 | 30.288 | 208 | 122 | 7 | 320 | 512 | 25 | 224 | 1.90e-20 | 91.3 |
| Msa0706270 | AT5G48970.2 | 30.000 | 260 | 156 | 7 | 272 | 508 | 1 | 257 | 2.61e-27 | 111 |
| Msa0706270 | AT5G48970.2 | 34.043 | 141 | 89 | 3 | 374 | 512 | 5 | 143 | 2.41e-17 | 82.8 |
| Msa0706270 | AT5G48970.2 | 26.190 | 210 | 124 | 6 | 232 | 413 | 55 | 261 | 3.45e-15 | 76.3 |
| Msa0706270 | AT5G64970.3 | 30.435 | 299 | 174 | 8 | 221 | 496 | 117 | 404 | 5.43e-27 | 113 |
| Msa0706270 | AT5G64970.3 | 28.649 | 185 | 124 | 3 | 327 | 511 | 129 | 305 | 1.39e-13 | 73.2 |
| Msa0706270 | AT2G35800.1 | 23.030 | 495 | 334 | 13 | 23 | 514 | 355 | 805 | 6.39e-27 | 115 |
| Msa0706270 | AT1G25380.1 | 31.408 | 277 | 166 | 9 | 251 | 510 | 33 | 302 | 1.19e-26 | 111 |
| Msa0706270 | AT1G25380.2 | 31.408 | 277 | 166 | 9 | 251 | 510 | 33 | 302 | 1.19e-26 | 111 |
| Msa0706270 | AT1G14560.3 | 32.161 | 199 | 111 | 6 | 333 | 511 | 25 | 219 | 6.08e-26 | 106 |
| Msa0706270 | AT1G14560.3 | 27.966 | 118 | 69 | 2 | 413 | 514 | 4 | 121 | 1.06e-11 | 65.5 |
| Msa0706270 | AT1G14560.3 | 25.500 | 200 | 120 | 5 | 239 | 413 | 25 | 220 | 3.44e-11 | 63.9 |
| Msa0706270 | AT1G74240.1 | 27.476 | 313 | 182 | 6 | 237 | 514 | 34 | 336 | 3.28e-25 | 107 |
| Msa0706270 | AT1G74240.1 | 26.601 | 203 | 122 | 4 | 336 | 515 | 39 | 237 | 1.82e-14 | 75.5 |
| Msa0706270 | AT1G34065.1 | 28.669 | 293 | 171 | 9 | 232 | 515 | 73 | 336 | 1.28e-22 | 99.8 |
| Msa0706270 | AT1G34065.2 | 28.669 | 293 | 171 | 9 | 232 | 515 | 66 | 329 | 1.90e-22 | 99.0 |
| Msa0706270 | AT5G17400.1 | 28.669 | 293 | 183 | 8 | 229 | 502 | 4 | 289 | 2.19e-22 | 98.2 |
| Msa0706270 | AT4G11440.1 | 26.102 | 295 | 208 | 4 | 226 | 516 | 317 | 605 | 8.77e-22 | 99.4 |
| Msa0706270 | AT4G11440.2 | 26.102 | 295 | 208 | 4 | 226 | 516 | 317 | 605 | 8.77e-22 | 99.4 |
| Msa0706270 | AT2G30160.1 | 27.915 | 283 | 186 | 5 | 240 | 511 | 43 | 318 | 2.10e-21 | 95.9 |
| Msa0706270 | AT2G30160.1 | 27.322 | 183 | 123 | 4 | 333 | 514 | 42 | 215 | 3.55e-14 | 74.3 |
| Msa0706270 | AT1G74240.2 | 26.441 | 295 | 172 | 6 | 255 | 514 | 4 | 288 | 3.10e-21 | 95.1 |
| Msa0706270 | AT1G74240.2 | 25.521 | 192 | 116 | 4 | 347 | 515 | 2 | 189 | 1.72e-11 | 65.9 |
| Msa0706270 | AT1G14140.1 | 26.855 | 283 | 186 | 9 | 244 | 511 | 21 | 297 | 1.77e-20 | 92.4 |
| Msa0706270 | AT1G14140.1 | 27.746 | 173 | 117 | 4 | 329 | 493 | 12 | 184 | 6.96e-15 | 75.9 |
| Msa0706270 | AT1G07030.1 | 28.472 | 288 | 181 | 7 | 237 | 511 | 38 | 313 | 1.81e-20 | 92.8 |
| Msa0706270 | AT1G07030.1 | 27.473 | 182 | 124 | 2 | 333 | 514 | 40 | 213 | 1.98e-15 | 77.8 |
| Msa0706270 | AT4G39460.2 | 29.391 | 279 | 169 | 6 | 239 | 514 | 58 | 311 | 1.91e-20 | 92.8 |
| Msa0706270 | AT4G39460.1 | 29.391 | 279 | 169 | 6 | 239 | 514 | 58 | 311 | 1.91e-20 | 92.8 |
| Msa0706270 | AT4G39460.3 | 29.391 | 279 | 169 | 6 | 239 | 514 | 58 | 311 | 1.91e-20 | 92.8 |
| Msa0706270 | AT5G58970.1 | 26.990 | 289 | 188 | 6 | 239 | 512 | 16 | 296 | 4.23e-20 | 91.3 |
| Msa0706270 | AT3G54110.1 | 28.082 | 292 | 185 | 8 | 237 | 512 | 13 | 295 | 1.49e-18 | 87.0 |
| Msa0706270 | AT4G28390.1 | 27.817 | 284 | 177 | 9 | 239 | 502 | 83 | 358 | 1.77e-18 | 87.8 |
| Msa0706270 | AT4G28390.2 | 27.817 | 284 | 177 | 9 | 239 | 502 | 83 | 358 | 1.77e-18 | 87.8 |
| Msa0706270 | AT5G46800.2 | 26.263 | 297 | 189 | 7 | 241 | 514 | 10 | 299 | 2.52e-18 | 86.3 |
| Msa0706270 | AT5G46800.3 | 26.263 | 297 | 189 | 7 | 241 | 514 | 10 | 299 | 2.52e-18 | 86.3 |
| Msa0706270 | AT5G46800.1 | 26.263 | 297 | 189 | 7 | 241 | 514 | 10 | 299 | 2.52e-18 | 86.3 |
| Msa0706270 | AT5G13490.1 | 27.148 | 291 | 171 | 10 | 239 | 502 | 88 | 364 | 3.32e-17 | 84.0 |
| Msa0706270 | AT5G13490.2 | 27.148 | 291 | 171 | 10 | 239 | 502 | 88 | 364 | 3.32e-17 | 84.0 |
| Msa0706270 | AT5G42130.1 | 26.316 | 266 | 178 | 5 | 255 | 511 | 134 | 390 | 6.72e-17 | 83.2 |
| Msa0706270 | AT3G08580.2 | 26.316 | 285 | 181 | 7 | 239 | 502 | 84 | 360 | 1.10e-16 | 82.4 |
| Msa0706270 | AT3G08580.1 | 26.316 | 285 | 181 | 7 | 239 | 502 | 84 | 360 | 1.10e-16 | 82.4 |
| Msa0706270 | AT1G79900.1 | 24.621 | 264 | 191 | 2 | 245 | 508 | 22 | 277 | 4.98e-16 | 79.3 |
| Msa0706270 | AT1G79900.1 | 30.409 | 171 | 111 | 4 | 242 | 409 | 112 | 277 | 2.45e-14 | 74.3 |
| Msa0706270 | AT3G05290.1 | 27.703 | 296 | 175 | 12 | 241 | 510 | 13 | 295 | 2.10e-15 | 77.8 |
| Msa0706270 | AT2G39970.1 | 24.176 | 273 | 171 | 10 | 278 | 516 | 53 | 323 | 5.42e-15 | 76.6 |
| Msa0706270 | AT5G15640.2 | 24.013 | 304 | 207 | 7 | 229 | 512 | 11 | 310 | 1.40e-14 | 75.1 |
| Msa0706270 | AT5G27520.1 | 28.231 | 294 | 176 | 11 | 241 | 510 | 15 | 297 | 3.08e-14 | 74.3 |
| Msa0706270 | AT2G33820.1 | 25.249 | 301 | 192 | 11 | 239 | 516 | 18 | 308 | 3.92e-14 | 73.9 |
| Msa0706270 | AT5G01340.1 | 23.345 | 287 | 195 | 9 | 240 | 510 | 18 | 295 | 5.86e-14 | 73.2 |
| Msa0706270 | AT5G26200.1 | 27.273 | 308 | 195 | 10 | 231 | 512 | 31 | 335 | 6.46e-14 | 73.6 |
| Msa0706270 | AT5G26200.1 | 28.378 | 222 | 132 | 8 | 222 | 417 | 119 | 339 | 3.41e-11 | 65.1 |
| Msa0706270 | AT2G26360.1 | 25.532 | 282 | 194 | 7 | 234 | 514 | 110 | 376 | 7.47e-14 | 73.9 |
| Msa0706270 | AT5G15640.1 | 23.826 | 298 | 203 | 7 | 235 | 512 | 24 | 317 | 9.63e-14 | 72.8 |
| Msa0706270 | AT4G27940.1 | 24.506 | 253 | 169 | 5 | 278 | 511 | 155 | 404 | 1.13e-12 | 70.5 |
| Msa0706270 | AT3G48850.1 | 27.119 | 177 | 120 | 3 | 335 | 509 | 73 | 242 | 2.31e-12 | 68.9 |
| Msa0706270 | AT3G48850.1 | 29.258 | 229 | 146 | 7 | 232 | 447 | 60 | 285 | 3.28e-11 | 65.5 |
| Msa0706270 | AT4G24570.1 | 23.750 | 320 | 189 | 9 | 237 | 514 | 4 | 310 | 4.50e-12 | 67.8 |
| Msa0706270 | AT2G33820.3 | 24.595 | 309 | 192 | 12 | 239 | 516 | 18 | 316 | 5.90e-12 | 67.4 |
| Msa0706270 | AT1G72820.1 | 22.581 | 310 | 208 | 7 | 235 | 512 | 27 | 336 | 6.78e-12 | 67.4 |
| Msa0706270 | AT1G72820.1 | 25.974 | 231 | 135 | 7 | 222 | 417 | 111 | 340 | 9.13e-12 | 67.0 |
| Msa0706270 | AT1G72820.2 | 22.581 | 310 | 208 | 7 | 235 | 512 | 27 | 336 | 6.78e-12 | 67.4 |
| Msa0706270 | AT1G72820.2 | 25.974 | 231 | 135 | 7 | 222 | 417 | 111 | 340 | 9.13e-12 | 67.0 |
| Msa0706270 | AT5G14040.1 | 26.344 | 186 | 122 | 5 | 330 | 510 | 79 | 254 | 7.90e-12 | 67.4 |
| Msa0706270 | AT5G14040.1 | 29.200 | 250 | 159 | 9 | 242 | 477 | 84 | 329 | 4.69e-11 | 65.1 |
| Msa0706270 | AT4G03115.3 | 23.860 | 285 | 191 | 7 | 238 | 511 | 69 | 338 | 4.27e-11 | 65.1 |
| Msa0706270 | AT4G03115.2 | 26.923 | 182 | 117 | 6 | 337 | 514 | 42 | 211 | 6.47e-11 | 62.8 |
| Msa0706270 | AT4G03115.1 | 23.860 | 285 | 191 | 7 | 238 | 511 | 37 | 306 | 7.87e-11 | 63.9 |
| Msa0706270 | AT4G03115.4 | 26.923 | 182 | 117 | 6 | 337 | 514 | 42 | 211 | 9.28e-11 | 62.4 |
Find 169 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCTACTAATAAAGGGTATT+TGG | 0.097879 | 4_4:-79262144 | Msa0706270:CDS |
| GTGTTCGGGGTTTCAAAATT+TGG | 0.148142 | 4_4:+79262368 | None:intergenic |
| TGGCAACGAGACGGTTTATT+AGG | 0.203876 | 4_4:-79260147 | Msa0706270:CDS |
| TTCTTTGACGCTACTAATAA+AGG | 0.205124 | 4_4:-79262152 | Msa0706270:CDS |
| CTTGGATGTGGGACAGTTTC+GGG | 0.228064 | 4_4:-79259568 | Msa0706270:CDS |
| GGCCTTGTTCCATCTCTTCT+TGG | 0.236132 | 4_4:-79259820 | Msa0706270:CDS |
| GTCAGATATAATATATTTCT+TGG | 0.259740 | 4_4:+79259741 | None:intergenic |
| AACTAAAAGTTTGAGAAATT+AGG | 0.269661 | 4_4:-79258594 | Msa0706270:three_prime_UTR |
| AGAAGTCGCCGGAGATGATT+TGG | 0.282313 | 4_4:+79262292 | None:intergenic |
| AGAAAATGAGAGTAATTAAG+AGG | 0.282492 | 4_4:+79262767 | None:intergenic |
| TTCAATGGATCATGTTCTAT+TGG | 0.289968 | 4_4:-79262228 | Msa0706270:CDS |
| TCCTTAGCGTATTTATATTC+AGG | 0.290117 | 4_4:+79262077 | None:intergenic |
| ACCACCTCTCTTCAAATTTC+AGG | 0.299337 | 4_4:-79262655 | Msa0706270:intron |
| CTCGAAAGCCTTCGTCCTTA+AGG | 0.303116 | 4_4:+79258901 | None:intergenic |
| GGCACAACTTTGAGGAGATT+TGG | 0.303845 | 4_4:+79258858 | None:intergenic |
| TTCAAATTCAAATGCTTCAC+TGG | 0.314602 | 4_4:-79262404 | Msa0706270:five_prime_UTR |
| CGCCGGAGATGATTTGGGTT+TGG | 0.315050 | 4_4:+79262298 | None:intergenic |
| TATTCTTCCTGAAGAACTTT+GGG | 0.325825 | 4_4:-79261925 | Msa0706270:CDS |
| GCTGATTTCAAATGTTATAT+AGG | 0.340376 | 4_4:-79258751 | Msa0706270:three_prime_UTR |
| ACCCACGTGGTCCATGTCTA+TGG | 0.340694 | 4_4:+79262325 | None:intergenic |
| TTCATAAGCATAAAACTTGA+TGG | 0.341735 | 4_4:+79260074 | None:intergenic |
| TCTATATATATCAAGTTATT+AGG | 0.343183 | 4_4:-79258562 | Msa0706270:three_prime_UTR |
| ACTTGGATGTGGGACAGTTT+CGG | 0.345888 | 4_4:-79259569 | Msa0706270:CDS |
| GAACCCTTACAAAGGATATA+TGG | 0.347440 | 4_4:-79259873 | Msa0706270:CDS |
| TGTTCGGGGTTTCAAAATTT+GGG | 0.350458 | 4_4:+79262369 | None:intergenic |
| TCGAAAGCCTTCGTCCTTAA+GGG | 0.350475 | 4_4:+79258902 | None:intergenic |
| CTTCATTACTGCTGGCATAA+TGG | 0.353220 | 4_4:+79260173 | None:intergenic |
| AACACAACAAAACACATGTC+TGG | 0.372831 | 4_4:-79262350 | Msa0706270:exon |
| AGAGCATCCCAAAGTTCTTC+AGG | 0.374338 | 4_4:+79261918 | None:intergenic |
| TGCAGCATCAAAGCTGGCTT+TGG | 0.374489 | 4_4:+79260521 | None:intergenic |
| TGCCATGCTTCTCAGGCTGC+AGG | 0.378131 | 4_4:-79258982 | Msa0706270:intron |
| GGCAACGAGACGGTTTATTA+GGG | 0.381008 | 4_4:-79260146 | Msa0706270:CDS |
| GCTATTGATGTTGAACATAA+TGG | 0.381502 | 4_4:-79261951 | Msa0706270:CDS |
| CAACACTTCTAGTGCTTACA+AGG | 0.382786 | 4_4:-79258949 | Msa0706270:CDS |
| GGGTAAAGTACATATCAAAA+TGG | 0.390966 | 4_4:+79258533 | None:intergenic |
| GGATCCATATATCCTTTGTA+AGG | 0.391902 | 4_4:+79259869 | None:intergenic |
| TTTCTTGGATATATCTTTCA+AGG | 0.392181 | 4_4:+79259756 | None:intergenic |
| GTATTCTTCCTGAAGAACTT+TGG | 0.396947 | 4_4:-79261926 | Msa0706270:CDS |
| ATGATCCATTGAAATTGAAC+CGG | 0.400793 | 4_4:+79262238 | None:intergenic |
| TATCCTTTGTAAGGGTTCCT+AGG | 0.406046 | 4_4:+79259878 | None:intergenic |
| AAAACCCGGTTCAATTTCAA+TGG | 0.407985 | 4_4:-79262243 | Msa0706270:CDS |
| TCTTTGACGCTACTAATAAA+GGG | 0.413870 | 4_4:-79262151 | Msa0706270:CDS |
| TGCCAGCAGTAATGAAGATA+TGG | 0.415808 | 4_4:-79260167 | Msa0706270:CDS |
| GAAGTCGCCGGAGATGATTT+GGG | 0.420586 | 4_4:+79262293 | None:intergenic |
| CAAGGGAACAAGTCAGATAT+TGG | 0.420941 | 4_4:-79260024 | Msa0706270:CDS |
| TTTGTAAGGGTTCCTAGGTT+CGG | 0.421581 | 4_4:+79259883 | None:intergenic |
| GGGACAGTTTCGGGAGCTCT+TGG | 0.425562 | 4_4:-79259559 | Msa0706270:CDS |
| CTTTGTTGAGCATGTTGATA+AGG | 0.428962 | 4_4:-79260466 | Msa0706270:CDS |
| ATAACATTTGAAATCAGCTC+TGG | 0.430191 | 4_4:+79258756 | None:intergenic |
| AAGAAAGGGATGTTCGTATT+CGG | 0.433508 | 4_4:-79262187 | Msa0706270:CDS |
| TTAATATAAGACACTAATAG+TGG | 0.434861 | 4_4:+79258512 | None:intergenic |
| ACATGCTTGCTGATGCCTTC+AGG | 0.436950 | 4_4:+79260309 | None:intergenic |
| CATGTTGATAAGGATAATAA+TGG | 0.437979 | 4_4:-79260456 | Msa0706270:CDS |
| AATTAAGAGGGGAGAGAGAG+AGG | 0.443857 | 4_4:+79262780 | None:intergenic |
| TGCCATATCTTCATTACTGC+TGG | 0.447668 | 4_4:+79260165 | None:intergenic |
| CTTGGTATGATTCCTTATGC+AGG | 0.448812 | 4_4:-79259802 | Msa0706270:CDS |
| TGAAAATATATATCAACATT+GGG | 0.450630 | 4_4:-79260373 | Msa0706270:CDS |
| TTGCAGCCGGCACAACTTTG+AGG | 0.450795 | 4_4:+79258850 | None:intergenic |
| ACACAACAAAACACATGTCT+GGG | 0.452954 | 4_4:-79262349 | Msa0706270:exon |
| ATTGGCTTTGCGTGAGACTA+AGG | 0.453356 | 4_4:-79262210 | Msa0706270:CDS |
| AGAAAGCCCGGGGTCCCTCT+TGG | 0.455646 | 4_4:+79259848 | None:intergenic |
| CATTGGATCTTATCAAAACT+AGG | 0.459278 | 4_4:-79259939 | Msa0706270:CDS |
| AGCATTTGAATTTGAAGAAG+TGG | 0.460556 | 4_4:+79262411 | None:intergenic |
| GAAAATGAGAGTAATTAAGA+GGG | 0.460758 | 4_4:+79262768 | None:intergenic |
| AGGACATCTTAAAATGTTGA+TGG | 0.463643 | 4_4:-79258731 | Msa0706270:three_prime_UTR |
| GATTATGCTCACATTGAAGC+AGG | 0.464288 | 4_4:-79262122 | Msa0706270:CDS |
| TTACAAGTAGTGATTCTTCA+AGG | 0.464396 | 4_4:-79258669 | Msa0706270:three_prime_UTR |
| TTGAAGAGAGGTGGTGATGA+CGG | 0.467107 | 4_4:+79262663 | None:intergenic |
| ATTAAGAGGGGAGAGAGAGA+GGG | 0.467906 | 4_4:+79262781 | None:intergenic |
| TGGGATGCTCTTGTCAAGGC+TGG | 0.469628 | 4_4:-79261906 | Msa0706270:intron |
| GGACCCCGGGCTTTCTATAG+AGG | 0.470590 | 4_4:-79259841 | Msa0706270:CDS |
| GGCTGCAAGTATTACTTACA+TGG | 0.473791 | 4_4:-79258835 | Msa0706270:CDS |
| CAAGGCCTCTATAGAAAGCC+CGG | 0.474710 | 4_4:+79259836 | None:intergenic |
| AATCCCTGCAGCATCAAAGC+TGG | 0.477739 | 4_4:+79260515 | None:intergenic |
| TGATGGACGACATTCTTATG+AGG | 0.483672 | 4_4:-79258428 | Msa0706270:three_prime_UTR |
| GTGAGATCAATGCCTGCATA+AGG | 0.489678 | 4_4:+79259790 | None:intergenic |
| TTGAAAATATATATCAACAT+TGG | 0.489803 | 4_4:-79260374 | Msa0706270:CDS |
| CTTGTAAGCACTAGAAGTGT+TGG | 0.492262 | 4_4:+79258950 | None:intergenic |
| AAAGCCAGCTTTGATGCTGC+AGG | 0.493076 | 4_4:-79260519 | Msa0706270:CDS |
| GTGATGGTGGATAGAATTGA+TGG | 0.493364 | 4_4:-79258445 | Msa0706270:three_prime_UTR |
| TATCATAAATATATACAGAT+TGG | 0.493944 | 4_4:-79258479 | Msa0706270:three_prime_UTR |
| CTTAAGGACGAAGGCTTTCG+AGG | 0.496296 | 4_4:-79258900 | Msa0706270:CDS |
| TGCGTGAGACTAAGGAAGAA+AGG | 0.499336 | 4_4:-79262202 | Msa0706270:CDS |
| TAAAACTTGATGGCGCTCTC+AGG | 0.501460 | 4_4:+79260084 | None:intergenic |
| CCTGGTCCTCTAGTACAACT+TGG | 0.503374 | 4_4:-79259586 | Msa0706270:CDS |
| TTAAGAGGGGAGAGAGAGAG+GGG | 0.505459 | 4_4:+79262782 | None:intergenic |
| TACTTGTGTCTATCCACTGC+AGG | 0.508122 | 4_4:-79259533 | Msa0706270:CDS |
| CTCCAAACCCAAATCATCTC+CGG | 0.511140 | 4_4:-79262300 | Msa0706270:CDS |
| CTTGTTCTCCAATGTCTACA+AGG | 0.511918 | 4_4:+79260340 | None:intergenic |
| CACTGCAGGTTATTCGTACA+AGG | 0.514518 | 4_4:-79259519 | Msa0706270:intron |
| TGCTCCTCTTGATCGTCTAA+AGG | 0.526318 | 4_4:-79260226 | Msa0706270:CDS |
| ACAGATTGCTATCTATCCAT+TGG | 0.526332 | 4_4:-79259956 | Msa0706270:CDS |
| CCTCTAGTACAACTTGGATG+TGG | 0.526958 | 4_4:-79259580 | Msa0706270:CDS |
| AAGTCAGATATTGGTACTGC+CGG | 0.527417 | 4_4:-79260015 | Msa0706270:CDS |
| AAATCTCCTCAAAGTTGTGC+CGG | 0.530979 | 4_4:-79258856 | Msa0706270:CDS |
| GATCCATATATCCTTTGTAA+GGG | 0.533301 | 4_4:+79259870 | None:intergenic |
| TCAAATTCAAATGCTTCACT+GGG | 0.534194 | 4_4:-79262403 | Msa0706270:five_prime_UTR |
| TGATCCATTGAAATTGAACC+GGG | 0.535986 | 4_4:+79262239 | None:intergenic |
| CCGACCACCGATCACGGCCG+TGG | 0.537152 | 4_4:-79262269 | Msa0706270:CDS |
| CCAAGTTGTACTAGAGGACC+AGG | 0.543145 | 4_4:+79259586 | None:intergenic |
| ACTTCTCCGACCACCGATCA+CGG | 0.543289 | 4_4:-79262275 | Msa0706270:CDS |
| TATGGATCCAAGAGGGACCC+CGG | 0.549177 | 4_4:-79259855 | Msa0706270:CDS |
| GCGTGAGACTAAGGAAGAAA+GGG | 0.551313 | 4_4:-79262201 | Msa0706270:CDS |
| GGCGCATGGCTTTGTGATGG+TGG | 0.553425 | 4_4:-79258458 | Msa0706270:three_prime_UTR |
| GGAATCATACCAAGAAGAGA+TGG | 0.555459 | 4_4:+79259811 | None:intergenic |
| CAGACTTGTGCGTCTGAAGG+TGG | 0.555942 | 4_4:-79259913 | Msa0706270:CDS |
| AGGCTTTCGAGGGTTCTACA+AGG | 0.560865 | 4_4:-79258889 | Msa0706270:CDS |
| GGTGGAAAGGCTCCGAACCT+AGG | 0.563950 | 4_4:-79259895 | Msa0706270:CDS |
| CTACTTGTAATAGTGCCTAC+AGG | 0.565305 | 4_4:+79258682 | None:intergenic |
| ATTTGTGATGCTGATAGAGA+TGG | 0.565356 | 4_4:-79262044 | Msa0706270:CDS |
| CATGTCTGGGGCCATAGACA+TGG | 0.566057 | 4_4:-79262336 | Msa0706270:CDS |
| CCACGGCCGTGATCGGTGGT+CGG | 0.567990 | 4_4:+79262269 | None:intergenic |
| ATGGATCCAAGAGGGACCCC+GGG | 0.571593 | 4_4:-79259854 | Msa0706270:CDS |
| ATATATATCAACATTGGGAG+AGG | 0.571984 | 4_4:-79260368 | Msa0706270:CDS |
| AAGGCCTCTATAGAAAGCCC+GGG | 0.573250 | 4_4:+79259837 | None:intergenic |
| TTAGCGTATTTATATTCAGG+TGG | 0.576089 | 4_4:+79262080 | None:intergenic |
| AAAATGAGAGTAATTAAGAG+GGG | 0.577128 | 4_4:+79262769 | None:intergenic |
| GTGGTCTTACAAATTCAGAC+TGG | 0.577576 | 4_4:-79260204 | Msa0706270:CDS |
| CTCTAGTACAACTTGGATGT+GGG | 0.578834 | 4_4:-79259579 | Msa0706270:CDS |
| AGGGTATGCCTTGTAGACAT+TGG | 0.583161 | 4_4:-79260348 | Msa0706270:CDS |
| TTACAGACTTGTGCGTCTGA+AGG | 0.583228 | 4_4:-79259916 | Msa0706270:CDS |
| AAGTAGTGATTCTTCAAGGA+GGG | 0.583742 | 4_4:-79258665 | Msa0706270:three_prime_UTR |
| GCATCAGCAAGCATGTGCAC+AGG | 0.584381 | 4_4:-79260302 | Msa0706270:CDS |
| AATGTAATTGGAGATAGTCA+AGG | 0.585996 | 4_4:-79260042 | Msa0706270:CDS |
| TGGAAAACCCTTAAGGACGA+AGG | 0.588718 | 4_4:-79258909 | Msa0706270:CDS |
| TAATATAAGACACTAATAGT+GGG | 0.588803 | 4_4:+79258513 | None:intergenic |
| TTGTGCGTCTGAAGGTGGAA+AGG | 0.589865 | 4_4:-79259908 | Msa0706270:CDS |
| CTTGTACGAATAACCTGCAG+TGG | 0.590465 | 4_4:+79259520 | None:intergenic |
| TAATGGGTTGAATGTTGTGA+AGG | 0.593361 | 4_4:-79260112 | Msa0706270:CDS |
| TTAAGGACGAAGGCTTTCGA+GGG | 0.595236 | 4_4:-79258899 | Msa0706270:CDS |
| ACCTGAATATAAATACGCTA+AGG | 0.597962 | 4_4:-79262078 | Msa0706270:CDS |
| GAGAGATTAACTAATCCTGT+AGG | 0.601229 | 4_4:-79258697 | Msa0706270:three_prime_UTR |
| ACTTTGGGATGCTCTTGTCA+AGG | 0.602469 | 4_4:-79261910 | Msa0706270:CDS |
| ACCTGAAATTTGAAGAGAGG+TGG | 0.603519 | 4_4:+79262654 | None:intergenic |
| TAACATTTGAAATCAGCTCT+GGG | 0.606800 | 4_4:+79258757 | None:intergenic |
| ATGTAATTGGAGATAGTCAA+GGG | 0.608848 | 4_4:-79260041 | Msa0706270:CDS |
| ACCACCTTTAGACGATCAAG+AGG | 0.609465 | 4_4:+79260222 | None:intergenic |
| AAGCCAGCTTTGATGCTGCA+GGG | 0.613413 | 4_4:-79260518 | Msa0706270:CDS |
| CGTTACGTTAATGTTTGATG+CGG | 0.613967 | 4_4:+79262731 | None:intergenic |
| ATTATGCTCACATTGAAGCA+GGG | 0.615028 | 4_4:-79262121 | Msa0706270:CDS |
| TAAGCACTAGAAGTGTTGGT+AGG | 0.615335 | 4_4:+79258954 | None:intergenic |
| TTTGTGATGCTGATAGAGAT+GGG | 0.615874 | 4_4:-79262043 | Msa0706270:CDS |
| GAACAAGCTGTCATTCCTGA+AGG | 0.618005 | 4_4:-79260324 | Msa0706270:CDS |
| GGCTTTCGAGGGTTCTACAA+GGG | 0.618467 | 4_4:-79258888 | Msa0706270:CDS |
| TATATATCAACATTGGGAGA+GGG | 0.618834 | 4_4:-79260367 | Msa0706270:CDS |
| GGCCATAGACATGGACCACG+TGG | 0.619134 | 4_4:-79262327 | Msa0706270:CDS |
| GGTACCTGAAATTTGAAGAG+AGG | 0.619972 | 4_4:+79262651 | None:intergenic |
| CAACATTCAACCCATTACCT+CGG | 0.628881 | 4_4:+79260118 | None:intergenic |
| ATGTAAGTAATACTTGCAGC+CGG | 0.630205 | 4_4:+79258837 | None:intergenic |
| TCCTCTTGATCGTCTAAAGG+TGG | 0.632322 | 4_4:-79260223 | Msa0706270:CDS |
| CCACATCCAAGTTGTACTAG+AGG | 0.639833 | 4_4:+79259580 | None:intergenic |
| AATATATACAGATTGGCGCA+TGG | 0.642492 | 4_4:-79258472 | Msa0706270:three_prime_UTR |
| ATAGATAGCAATCTGTGCAA+TGG | 0.645374 | 4_4:+79259963 | None:intergenic |
| TCGGTGGTCGGAGAAGTCGC+CGG | 0.645691 | 4_4:+79262281 | None:intergenic |
| CTTACAAATTCAGACTGGAA+AGG | 0.645930 | 4_4:-79260199 | Msa0706270:CDS |
| AAGGATATATGGATCCAAGA+GGG | 0.650322 | 4_4:-79259862 | Msa0706270:CDS |
| ATTGGCGCATGGCTTTGTGA+TGG | 0.652407 | 4_4:-79258461 | Msa0706270:three_prime_UTR |
| TACCAAGAAGAGATGGAACA+AGG | 0.652820 | 4_4:+79259818 | None:intergenic |
| AACACTTCTAGTGCTTACAA+GGG | 0.655900 | 4_4:-79258948 | Msa0706270:CDS |
| AAATATATTATATCTGACCA+TGG | 0.657158 | 4_4:-79259736 | Msa0706270:intron |
| CACAACAAAACACATGTCTG+GGG | 0.666612 | 4_4:-79262348 | Msa0706270:exon |
| ATGAAGATATGGCAACGAGA+CGG | 0.675716 | 4_4:-79260156 | Msa0706270:CDS |
| CAAGTAGTGATTCTTCAAGG+AGG | 0.676445 | 4_4:-79258666 | Msa0706270:three_prime_UTR |
| TGCAGGGATTGAAATTGATG+AGG | 0.683016 | 4_4:-79260502 | Msa0706270:CDS |
| GCCATAGACATGGACCACGT+GGG | 0.686014 | 4_4:-79262326 | Msa0706270:CDS |
| AAAGGATATATGGATCCAAG+AGG | 0.690784 | 4_4:-79259863 | Msa0706270:CDS |
| GAACCTAGGAACCCTTACAA+AGG | 0.697269 | 4_4:-79259881 | Msa0706270:CDS |
| AGGCCTCTATAGAAAGCCCG+GGG | 0.730497 | 4_4:+79259838 | None:intergenic |
| TGGGTTTGGAGAAACCCACG+TGG | 0.761132 | 4_4:+79262312 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATTAAAAATAAAATA+AGG | + | chr4_4:79258503-79258522 | None:intergenic | 0.0% |
| !!! | TACATATTTTATAACAAATA+GGG | - | chr4_4:79259535-79259554 | Msa0706270:CDS | 10.0% |
| !! | AATTTATCAATAAGAATATA+AGG | + | chr4_4:79261547-79261566 | None:intergenic | 10.0% |
| !!! | TAAAAGGTTAAATTTTATTT+TGG | + | chr4_4:79262164-79262183 | None:intergenic | 10.0% |
| !!! | CCATTTTTTAAAATTATAAC+CGG | + | chr4_4:79259424-79259443 | None:intergenic | 15.0% |
| !!! | CTACATATTTTATAACAAAT+AGG | - | chr4_4:79259534-79259553 | Msa0706270:CDS | 15.0% |
| !! | TTAATAAAAACAAGAGAAAA+CGG | + | chr4_4:79260100-79260119 | None:intergenic | 15.0% |
| !! | ATATATATGAGTTATAACTA+TGG | + | chr4_4:79260298-79260317 | None:intergenic | 15.0% |
| !! | TAAATAACTATGAATTTGTA+TGG | - | chr4_4:79260446-79260465 | Msa0706270:CDS | 15.0% |
| !!! | ATGTTGATATATATTTTCAA+GGG | + | chr4_4:79260829-79260848 | None:intergenic | 15.0% |
| !!! | AATGTTGATATATATTTTCA+AGG | + | chr4_4:79260830-79260849 | None:intergenic | 15.0% |
| !! | TTGAAAATATATATCAACAT+TGG | - | chr4_4:79260829-79260848 | Msa0706270:intron | 15.0% |
| !! | TGAAAATATATATCAACATT+GGG | - | chr4_4:79260830-79260849 | Msa0706270:intron | 15.0% |
| !! | TACATTGTATAAATTCTAAA+AGG | + | chr4_4:79262180-79262199 | None:intergenic | 15.0% |
| !! | TCTATATATATCAAGTTATT+AGG | - | chr4_4:79262641-79262660 | Msa0706270:intron | 15.0% |
| !! | TATCATAAATATATACAGAT+TGG | - | chr4_4:79262724-79262743 | Msa0706270:five_prime_UTR | 15.0% |
| !! | AATTTAAGAGAAGAATAAGA+AGG | + | chr4_4:79258576-79258595 | None:intergenic | 20.0% |
| !! | TTGAATTGAAAAATAAGTCA+AGG | + | chr4_4:79258665-79258684 | None:intergenic | 20.0% |
| !!! | TTGATTATCATGATTTTAGA+CGG | - | chr4_4:79259187-79259206 | Msa0706270:intron | 20.0% |
| !!! | CCGGTTATAATTTTAAAAAA+TGG | - | chr4_4:79259421-79259440 | Msa0706270:intron | 20.0% |
| !!! | ATATTTTATAACAAATAGGG+AGG | - | chr4_4:79259538-79259557 | Msa0706270:CDS | 20.0% |
| !! | GCTATAGTAAACATTAATAT+TGG | - | chr4_4:79259602-79259621 | Msa0706270:intron | 20.0% |
| !! | TAGTAAACATTAATATTGGT+TGG | - | chr4_4:79259606-79259625 | Msa0706270:intron | 20.0% |
| !!! | AGTAAACATTAATATTGGTT+GGG | - | chr4_4:79259607-79259626 | Msa0706270:intron | 20.0% |
| !! | AACATACTAACATCAAAAAA+AGG | + | chr4_4:79259673-79259692 | None:intergenic | 20.0% |
| !! | GCTTATAGAAAAAATTTCAA+AGG | - | chr4_4:79260416-79260435 | Msa0706270:CDS | 20.0% |
| !! | GGCATTATTATTTATATACT+AGG | - | chr4_4:79260581-79260600 | Msa0706270:intron | 20.0% |
| !! | ATTTATATACTAGGTCTTTA+AGG | - | chr4_4:79260590-79260609 | Msa0706270:intron | 20.0% |
| !! | GTCAGATATAATATATTTCT+TGG | + | chr4_4:79261465-79261484 | None:intergenic | 20.0% |
| !! | AAATATATTATATCTGACCA+TGG | - | chr4_4:79261467-79261486 | Msa0706270:intron | 20.0% |
| !!! | ATATGTCCTTTAGTTATTTT+AGG | - | chr4_4:79261829-79261848 | Msa0706270:intron | 20.0% |
| !! | AACTAAAAGTTTGAGAAATT+AGG | - | chr4_4:79262609-79262628 | Msa0706270:intron | 20.0% |
| !! | TAATATAAGACACTAATAGT+GGG | + | chr4_4:79262693-79262712 | None:intergenic | 20.0% |
| !! | TTAATATAAGACACTAATAG+TGG | + | chr4_4:79262694-79262713 | None:intergenic | 20.0% |
| ! | AAAATGAGAGTAATTAAGAG+GGG | + | chr4_4:79258437-79258456 | None:intergenic | 25.0% |
| ! | GAAAATGAGAGTAATTAAGA+GGG | + | chr4_4:79258438-79258457 | None:intergenic | 25.0% |
| ! | AGAAAATGAGAGTAATTAAG+AGG | + | chr4_4:79258439-79258458 | None:intergenic | 25.0% |
| !! | TTACTCTCATTTTCTTTCTA+CGG | - | chr4_4:79258444-79258463 | Msa0706270:three_prime_UTR | 25.0% |
| !!! | CTATTTTTTTTCATCACTTG+CGG | - | chr4_4:79258700-79258719 | Msa0706270:three_prime_UTR | 25.0% |
| ! | AAGTGACATAATTAACAAGA+GGG | + | chr4_4:79259336-79259355 | None:intergenic | 25.0% |
| ! | TAAGTGACATAATTAACAAG+AGG | + | chr4_4:79259337-79259356 | None:intergenic | 25.0% |
| !! | GTAAACATTAATATTGGTTG+GGG | - | chr4_4:79259608-79259627 | Msa0706270:intron | 25.0% |
| !! | TAAACATTAATATTGGTTGG+GGG | - | chr4_4:79259609-79259628 | Msa0706270:intron | 25.0% |
| !! | TTTTGATGTTAGTATGTTGT+TGG | - | chr4_4:79259675-79259694 | Msa0706270:intron | 25.0% |
| ! | AACTCAATCTCATTTAGAAA+AGG | + | chr4_4:79259866-79259885 | None:intergenic | 25.0% |
| !! | AGATATTTTCCCATTTTAGA+AGG | + | chr4_4:79259900-79259919 | None:intergenic | 25.0% |
| ! | AAATGGGAAAATATCTCATA+TGG | - | chr4_4:79259904-79259923 | Msa0706270:CDS | 25.0% |
| ! | ACAATGAGAAAATGAAACAA+GGG | + | chr4_4:79260648-79260667 | None:intergenic | 25.0% |
| ! | TACAATGAGAAAATGAAACA+AGG | + | chr4_4:79260649-79260668 | None:intergenic | 25.0% |
| !! | CATGTTGATAAGGATAATAA+TGG | - | chr4_4:79260747-79260766 | Msa0706270:intron | 25.0% |
| !!! | GAATTATCACTTTTGAAGAA+TGG | - | chr4_4:79260769-79260788 | Msa0706270:intron | 25.0% |
| ! | TTCATAAGCATAAAACTTGA+TGG | + | chr4_4:79261132-79261151 | None:intergenic | 25.0% |
| ! | GAAATGCTGAAAAATGTAAT+TGG | - | chr4_4:79261149-79261168 | Msa0706270:intron | 25.0% |
| ! | TTTCTTGGATATATCTTTCA+AGG | + | chr4_4:79261450-79261469 | None:intergenic | 25.0% |
| !! | AAGAAGAAAAGAGCATAAAA+AGG | + | chr4_4:79261590-79261609 | None:intergenic | 25.0% |
| ! | AAAAAAACTTAAGGACCAAA+GGG | + | chr4_4:79261858-79261877 | None:intergenic | 25.0% |
| ! | AAAAAAAACTTAAGGACCAA+AGG | + | chr4_4:79261859-79261878 | None:intergenic | 25.0% |
| ! | AGTGGAACAAAAAAAACTTA+AGG | + | chr4_4:79261867-79261886 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTTTGTTCCACTT+TGG | - | chr4_4:79261868-79261887 | Msa0706270:intron | 25.0% |
| ! | GTCTAACATTCGTAAATTAA+GGG | + | chr4_4:79261895-79261914 | None:intergenic | 25.0% |
| ! | TGTCTAACATTCGTAAATTA+AGG | + | chr4_4:79261896-79261915 | None:intergenic | 25.0% |
| !! | TTTACGAATGTTAGACATTT+TGG | - | chr4_4:79261899-79261918 | Msa0706270:intron | 25.0% |
| ! | CAAATGAAAAACTGAAAGAA+AGG | - | chr4_4:79262047-79262066 | Msa0706270:CDS | 25.0% |
| !!! | AGTTTTTTTTCGTTCCATTT+TGG | + | chr4_4:79262103-79262122 | None:intergenic | 25.0% |
| ! | ATGGAACGAAAAAAAACTTA+AGG | - | chr4_4:79262105-79262124 | Msa0706270:CDS | 25.0% |
| ! | TGGAACGAAAAAAAACTTAA+GGG | - | chr4_4:79262106-79262125 | Msa0706270:CDS | 25.0% |
| ! | TAAAACCTGAAAACAACTTA+AGG | - | chr4_4:79262136-79262155 | Msa0706270:CDS | 25.0% |
| !! | GCTGATTTCAAATGTTATAT+AGG | - | chr4_4:79262452-79262471 | Msa0706270:intron | 25.0% |
| GAAAAAATGTGGGGTTAAAT+GGG | + | chr4_4:79258751-79258770 | None:intergenic | 30.0% | |
| AGAAAAAATGTGGGGTTAAA+TGG | + | chr4_4:79258752-79258771 | None:intergenic | 30.0% | |
| ! | TGGAAGATTTTAGATCTGAA+GGG | + | chr4_4:79258775-79258794 | None:intergenic | 30.0% |
| AGCATTTGAATTTGAAGAAG+TGG | + | chr4_4:79258795-79258814 | None:intergenic | 30.0% | |
| TTCAAATTCAAATGCTTCAC+TGG | - | chr4_4:79258799-79258818 | Msa0706270:CDS | 30.0% | |
| TCAAATTCAAATGCTTCACT+GGG | - | chr4_4:79258800-79258819 | Msa0706270:CDS | 30.0% | |
| ATGATCCATTGAAATTGAAC+CGG | + | chr4_4:79258968-79258987 | None:intergenic | 30.0% | |
| TTCAATGGATCATGTTCTAT+TGG | - | chr4_4:79258975-79258994 | Msa0706270:intron | 30.0% | |
| TTCTTTGACGCTACTAATAA+AGG | - | chr4_4:79259051-79259070 | Msa0706270:intron | 30.0% | |
| TCTTTGACGCTACTAATAAA+GGG | - | chr4_4:79259052-79259071 | Msa0706270:intron | 30.0% | |
| TTAGCGTATTTATATTCAGG+TGG | + | chr4_4:79259126-79259145 | None:intergenic | 30.0% | |
| ACCTGAATATAAATACGCTA+AGG | - | chr4_4:79259125-79259144 | Msa0706270:intron | 30.0% | |
| TCCTTAGCGTATTTATATTC+AGG | + | chr4_4:79259129-79259148 | None:intergenic | 30.0% | |
| ! | TCATGATTTTAGACGGTATA+TGG | - | chr4_4:79259194-79259213 | Msa0706270:intron | 30.0% |
| GCTATTGATGTTGAACATAA+TGG | - | chr4_4:79259252-79259271 | Msa0706270:intron | 30.0% | |
| TATTCTTCCTGAAGAACTTT+GGG | - | chr4_4:79259278-79259297 | Msa0706270:intron | 30.0% | |
| AGTGACATAATTAACAAGAG+GGG | + | chr4_4:79259335-79259354 | None:intergenic | 30.0% | |
| ! | AAACATTAATATTGGTTGGG+GGG | - | chr4_4:79259610-79259629 | Msa0706270:intron | 30.0% |
| AAAAAGGAATAAGCATGCAA+TGG | + | chr4_4:79259657-79259676 | None:intergenic | 30.0% | |
| !!! | CTTGTTACTTTTCCTTGATT+GGG | - | chr4_4:79259705-79259724 | Msa0706270:intron | 30.0% |
| AATGAGATTGAGTTTCACAA+AGG | - | chr4_4:79259872-79259891 | Msa0706270:CDS | 30.0% | |
| !! | ACAAAGGTTCCTTCTAAAAT+GGG | - | chr4_4:79259888-79259907 | Msa0706270:CDS | 30.0% |
| ACATGAGTTTCTCTACTTAT+GGG | + | chr4_4:79259980-79259999 | None:intergenic | 30.0% | |
| TACATGAGTTTCTCTACTTA+TGG | + | chr4_4:79259981-79260000 | None:intergenic | 30.0% | |
| AATTGAAACAGTGATCCAAT+CGG | - | chr4_4:79260015-79260034 | Msa0706270:CDS | 30.0% | |
| !!! | TTCCTTGTTTTTTACTGAAC+CGG | + | chr4_4:79260043-79260062 | None:intergenic | 30.0% |
| AAACAAGAGAAAACGGATAT+AGG | + | chr4_4:79260093-79260112 | None:intergenic | 30.0% | |
| TTGAAAATCGGTCAAAACTT+TGG | + | chr4_4:79260202-79260221 | None:intergenic | 30.0% | |
| AAAAGAAACATGCATTCACA+AGG | + | chr4_4:79260382-79260401 | None:intergenic | 30.0% | |
| TATGAATTTGTATGGTGTGT+GGG | - | chr4_4:79260454-79260473 | Msa0706270:CDS | 30.0% | |
| ATCAAAGATTGAAGTCGAAT+CGG | + | chr4_4:79260498-79260517 | None:intergenic | 30.0% | |
| ! | TATATACTAGGTCTTTAAGG+TGG | - | chr4_4:79260593-79260612 | Msa0706270:intron | 30.0% |
| TGGAAAAATCTTCCACAAAA+GGG | + | chr4_4:79260623-79260642 | None:intergenic | 30.0% | |
| ATGGAAAAATCTTCCACAAA+AGG | + | chr4_4:79260624-79260643 | None:intergenic | 30.0% | |
| ATATATATCAACATTGGGAG+AGG | - | chr4_4:79260835-79260854 | Msa0706270:intron | 30.0% | |
| TATATATCAACATTGGGAGA+GGG | - | chr4_4:79260836-79260855 | Msa0706270:intron | 30.0% | |
| AATGTAATTGGAGATAGTCA+AGG | - | chr4_4:79261161-79261180 | Msa0706270:intron | 30.0% | |
| ATGTAATTGGAGATAGTCAA+GGG | - | chr4_4:79261162-79261181 | Msa0706270:intron | 30.0% | |
| !!! | CTAGTTTTGATAAGATCCAA+TGG | + | chr4_4:79261266-79261285 | None:intergenic | 30.0% |
| CATTGGATCTTATCAAAACT+AGG | - | chr4_4:79261264-79261283 | Msa0706270:intron | 30.0% | |
| GATCCATATATCCTTTGTAA+GGG | + | chr4_4:79261336-79261355 | None:intergenic | 30.0% | |
| TAAGTTAAAGAGATCAAGAG+TGG | + | chr4_4:79261506-79261525 | None:intergenic | 30.0% | |
| CCAGAGAAAAACATTACTTA+TGG | + | chr4_4:79261722-79261741 | None:intergenic | 30.0% | |
| ! | CCATAAGTAATGTTTTTCTC+TGG | - | chr4_4:79261719-79261738 | Msa0706270:intron | 30.0% |
| !! | ACACTCATTATTTGCTTTTG+GGG | + | chr4_4:79261753-79261772 | None:intergenic | 30.0% |
| !! | CACACTCATTATTTGCTTTT+GGG | + | chr4_4:79261754-79261773 | None:intergenic | 30.0% |
| CAAAAGCAAATAATGAGTGT+GGG | - | chr4_4:79261753-79261772 | Msa0706270:intron | 30.0% | |
| !! | CTTGATAGCTAGCTTTATAA+TGG | - | chr4_4:79261793-79261812 | Msa0706270:intron | 30.0% |
| GGGAAACCTAAAATAACTAA+AGG | + | chr4_4:79261838-79261857 | None:intergenic | 30.0% | |
| !!! | AGTTATTTTAGGTTTCCCTT+TGG | - | chr4_4:79261840-79261859 | Msa0706270:intron | 30.0% |
| AAGAAGGAAACACAAGAAAT+GGG | - | chr4_4:79262009-79262028 | Msa0706270:CDS | 30.0% | |
| AATCTGTACCATTTGTAACT+TGG | - | chr4_4:79262075-79262094 | Msa0706270:CDS | 30.0% | |
| ATCTGTACCATTTGTAACTT+GGG | - | chr4_4:79262076-79262095 | Msa0706270:CDS | 30.0% | |
| !!! | GTTGTTTTCAGGTTTTACTT+TGG | + | chr4_4:79262133-79262152 | None:intergenic | 30.0% |
| !!! | TGTTTTTTGGAAAACCCTTA+AGG | - | chr4_4:79262287-79262306 | Msa0706270:CDS | 30.0% |
| ! | TAACATTTGAAATCAGCTCT+GGG | + | chr4_4:79262449-79262468 | None:intergenic | 30.0% |
| ! | ATAACATTTGAAATCAGCTC+TGG | + | chr4_4:79262450-79262469 | None:intergenic | 30.0% |
| AGGACATCTTAAAATGTTGA+TGG | - | chr4_4:79262472-79262491 | Msa0706270:intron | 30.0% | |
| TTACAAGTAGTGATTCTTCA+AGG | - | chr4_4:79262534-79262553 | Msa0706270:intron | 30.0% | |
| !!! | TTTTAGTTCAGATAAGCAAG+GGG | + | chr4_4:79262597-79262616 | None:intergenic | 30.0% |
| !!! | CTTTTAGTTCAGATAAGCAA+GGG | + | chr4_4:79262598-79262617 | None:intergenic | 30.0% |
| !!! | ACTTTTAGTTCAGATAAGCA+AGG | + | chr4_4:79262599-79262618 | None:intergenic | 30.0% |
| GGGTAAAGTACATATCAAAA+TGG | + | chr4_4:79262673-79262692 | None:intergenic | 30.0% | |
| CGTTACGTTAATGTTTGATG+CGG | + | chr4_4:79258475-79258494 | None:intergenic | 35.0% | |
| !!! | TTTTTTTTCATCACTTGCGG+CGG | - | chr4_4:79258703-79258722 | Msa0706270:three_prime_UTR | 35.0% |
| TCTGAAGGGAGAAAAAATGT+GGG | + | chr4_4:79258761-79258780 | None:intergenic | 35.0% | |
| ATCTGAAGGGAGAAAAAATG+TGG | + | chr4_4:79258762-79258781 | None:intergenic | 35.0% | |
| ! | GTGGAAGATTTTAGATCTGA+AGG | + | chr4_4:79258776-79258795 | None:intergenic | 35.0% |
| TGTTCGGGGTTTCAAAATTT+GGG | + | chr4_4:79258837-79258856 | None:intergenic | 35.0% | |
| !! | ACATGTGTTTTGTTGTGTTC+GGG | + | chr4_4:79258852-79258871 | None:intergenic | 35.0% |
| !! | GACATGTGTTTTGTTGTGTT+CGG | + | chr4_4:79258853-79258872 | None:intergenic | 35.0% |
| AACACAACAAAACACATGTC+TGG | - | chr4_4:79258853-79258872 | Msa0706270:CDS | 35.0% | |
| ACACAACAAAACACATGTCT+GGG | - | chr4_4:79258854-79258873 | Msa0706270:CDS | 35.0% | |
| AAAACCCGGTTCAATTTCAA+TGG | - | chr4_4:79258960-79258979 | Msa0706270:CDS | 35.0% | |
| TGATCCATTGAAATTGAACC+GGG | + | chr4_4:79258967-79258986 | None:intergenic | 35.0% | |
| AAGAAAGGGATGTTCGTATT+CGG | - | chr4_4:79259016-79259035 | Msa0706270:intron | 35.0% | |
| !! | CGCTACTAATAAAGGGTATT+TGG | - | chr4_4:79259059-79259078 | Msa0706270:intron | 35.0% |
| ATTATGCTCACATTGAAGCA+GGG | - | chr4_4:79259082-79259101 | Msa0706270:intron | 35.0% | |
| ATTTGTGATGCTGATAGAGA+TGG | - | chr4_4:79259159-79259178 | Msa0706270:intron | 35.0% | |
| TTTGTGATGCTGATAGAGAT+GGG | - | chr4_4:79259160-79259179 | Msa0706270:intron | 35.0% | |
| GTATTCTTCCTGAAGAACTT+TGG | - | chr4_4:79259277-79259296 | Msa0706270:intron | 35.0% | |
| GTGACATAATTAACAAGAGG+GGG | + | chr4_4:79259334-79259353 | None:intergenic | 35.0% | |
| ! | GTTAGTATGTTGTTGGTTGT+TGG | - | chr4_4:79259682-79259701 | Msa0706270:intron | 35.0% |
| !!! | GCTTGTTACTTTTCCTTGAT+TGG | - | chr4_4:79259704-79259723 | Msa0706270:intron | 35.0% |
| AACATTTCTTGTCCCAATCA+AGG | + | chr4_4:79259720-79259739 | None:intergenic | 35.0% | |
| AATCTAAGTTTCTTCGAGCA+AGG | + | chr4_4:79259808-79259827 | None:intergenic | 35.0% | |
| ! | CACAAAGGTTCCTTCTAAAA+TGG | - | chr4_4:79259887-79259906 | Msa0706270:CDS | 35.0% |
| TGGGAAAATATCTCATATGG+TGG | - | chr4_4:79259907-79259926 | Msa0706270:CDS | 35.0% | |
| GTACGAAACAAGACAACAAT+CGG | - | chr4_4:79259946-79259965 | Msa0706270:CDS | 35.0% | |
| CATGAGTTTCTCTACTTATG+GGG | + | chr4_4:79259979-79259998 | None:intergenic | 35.0% | |
| CTGGATCAATGCTTGAAAAT+CGG | + | chr4_4:79260214-79260233 | None:intergenic | 35.0% | |
| ! | CCTTATTTGTGTCAAAGATG+CGG | + | chr4_4:79260239-79260258 | None:intergenic | 35.0% |
| TCTGTAGTCATTCATAGGTT+TGG | - | chr4_4:79260352-79260371 | Msa0706270:CDS | 35.0% | |
| ! | GTGAATGCATGTTTCTTTTG+AGG | - | chr4_4:79260383-79260402 | Msa0706270:CDS | 35.0% |
| CTATGAATTTGTATGGTGTG+TGG | - | chr4_4:79260453-79260472 | Msa0706270:CDS | 35.0% | |
| GATTCGACTTCAATCTTTGA+TGG | - | chr4_4:79260497-79260516 | Msa0706270:CDS | 35.0% | |
| TACTTGCTTACTTTATCGTG+TGG | - | chr4_4:79260545-79260564 | Msa0706270:intron | 35.0% | |
| ACTTGCTTACTTTATCGTGT+GGG | - | chr4_4:79260546-79260565 | Msa0706270:intron | 35.0% | |
| GAGAAAATGAAACAAGGGAA+TGG | + | chr4_4:79260643-79260662 | None:intergenic | 35.0% | |
| CTTTGTTGAGCATGTTGATA+AGG | - | chr4_4:79260737-79260756 | Msa0706270:intron | 35.0% | |
| ! | AGGAGCAGATATTTTATTGC+AGG | - | chr4_4:79260921-79260940 | Msa0706270:intron | 35.0% |
| ! | GGAGCAGATATTTTATTGCA+GGG | - | chr4_4:79260922-79260941 | Msa0706270:intron | 35.0% |
| ! | GAGCAGATATTTTATTGCAG+GGG | - | chr4_4:79260923-79260942 | Msa0706270:intron | 35.0% |
| ! | AGCAGATATTTTATTGCAGG+GGG | - | chr4_4:79260924-79260943 | Msa0706270:intron | 35.0% |
| CTTACAAATTCAGACTGGAA+AGG | - | chr4_4:79261004-79261023 | Msa0706270:intron | 35.0% | |
| !! | TAATGGGTTGAATGTTGTGA+AGG | - | chr4_4:79261091-79261110 | Msa0706270:intron | 35.0% |
| ATAGATAGCAATCTGTGCAA+TGG | + | chr4_4:79261243-79261262 | None:intergenic | 35.0% | |
| ACAGATTGCTATCTATCCAT+TGG | - | chr4_4:79261247-79261266 | Msa0706270:intron | 35.0% | |
| GAACCCTTACAAAGGATATA+TGG | - | chr4_4:79261330-79261349 | Msa0706270:intron | 35.0% | |
| GGATCCATATATCCTTTGTA+AGG | + | chr4_4:79261337-79261356 | None:intergenic | 35.0% | |
| AAAGGATATATGGATCCAAG+AGG | - | chr4_4:79261340-79261359 | Msa0706270:intron | 35.0% | |
| AAGGATATATGGATCCAAGA+GGG | - | chr4_4:79261341-79261360 | Msa0706270:intron | 35.0% | |
| GTGGCAAAAATATCATACCA+TGG | + | chr4_4:79261487-79261506 | None:intergenic | 35.0% | |
| ! | CTTTTCTTCTTCATAGAACC+TGG | - | chr4_4:79261599-79261618 | Msa0706270:intron | 35.0% |
| ! | CCACACTCATTATTTGCTTT+TGG | + | chr4_4:79261755-79261774 | None:intergenic | 35.0% |
| CCAAAAGCAAATAATGAGTG+TGG | - | chr4_4:79261752-79261771 | Msa0706270:intron | 35.0% | |
| TAATGAGTGTGGGATGATAT+CGG | - | chr4_4:79261763-79261782 | Msa0706270:intron | 35.0% | |
| !! | ACATTTGACGGACTCAAATA+TGG | + | chr4_4:79261942-79261961 | None:intergenic | 35.0% |
| ATTTGAGTCCGTCAAATGTT+TGG | - | chr4_4:79261943-79261962 | Msa0706270:CDS | 35.0% | |
| TTGTAGTGCCAAACATTTGA+CGG | + | chr4_4:79261954-79261973 | None:intergenic | 35.0% | |
| !! | GGCACTACAATTTGTTGATT+AGG | - | chr4_4:79261964-79261983 | Msa0706270:CDS | 35.0% |
| GAAGAAGGAAACACAAGAAA+TGG | - | chr4_4:79262008-79262027 | Msa0706270:CDS | 35.0% | |
| ! | TTTTGGTCCCAAGTTACAAA+TGG | + | chr4_4:79262086-79262105 | None:intergenic | 35.0% |
| TTTGTAACTTGGGACCAAAA+TGG | - | chr4_4:79262086-79262105 | Msa0706270:CDS | 35.0% | |
| !! | TGGATCCTTAAGTTGTTTTC+AGG | + | chr4_4:79262144-79262163 | None:intergenic | 35.0% |
| AACACTTCTAGTGCTTACAA+GGG | - | chr4_4:79262255-79262274 | Msa0706270:CDS | 35.0% | |
| !!! | AGGGAATGTCTGATGTTTTT+TGG | - | chr4_4:79262274-79262293 | Msa0706270:CDS | 35.0% |
| ATGTAAGTAATACTTGCAGC+CGG | + | chr4_4:79262369-79262388 | None:intergenic | 35.0% | |
| GAGAGATTAACTAATCCTGT+AGG | - | chr4_4:79262506-79262525 | Msa0706270:intron | 35.0% | |
| AAGTAGTGATTCTTCAAGGA+GGG | - | chr4_4:79262538-79262557 | Msa0706270:intron | 35.0% | |
| AATATATACAGATTGGCGCA+TGG | - | chr4_4:79262731-79262750 | Msa0706270:five_prime_UTR | 35.0% | |
| ACCACCTCTCTTCAAATTTC+AGG | - | chr4_4:79258548-79258567 | Msa0706270:three_prime_UTR | 40.0% | |
| ACCTGAAATTTGAAGAGAGG+TGG | + | chr4_4:79258552-79258571 | None:intergenic | 40.0% | |
| GGTACCTGAAATTTGAAGAG+AGG | + | chr4_4:79258555-79258574 | None:intergenic | 40.0% | |
| CTGAAGGGAGAAAAAATGTG+GGG | + | chr4_4:79258760-79258779 | None:intergenic | 40.0% | |
| GTGTTCGGGGTTTCAAAATT+TGG | + | chr4_4:79258838-79258857 | None:intergenic | 40.0% | |
| !! | CATGTGTTTTGTTGTGTTCG+GGG | + | chr4_4:79258851-79258870 | None:intergenic | 40.0% |
| CACAACAAAACACATGTCTG+GGG | - | chr4_4:79258855-79258874 | Msa0706270:CDS | 40.0% | |
| !!! | TTGAACCGGGTTTTTTTCCA+CGG | + | chr4_4:79258954-79258973 | None:intergenic | 40.0% |
| GATTATGCTCACATTGAAGC+AGG | - | chr4_4:79259081-79259100 | Msa0706270:intron | 40.0% | |
| GTCATTGTCTGTGATAGACA+TGG | - | chr4_4:79259466-79259485 | Msa0706270:intron | 40.0% | |
| ACTTGCATTGCCTATGATTG+TGG | - | chr4_4:79259767-79259786 | Msa0706270:CDS | 40.0% | |
| !! | TCATATGGTGGATTGATGCT+TGG | - | chr4_4:79259919-79259938 | Msa0706270:CDS | 40.0% |
| !! | TGCCGGTTCAGTAAAAAACA+AGG | - | chr4_4:79260038-79260057 | Msa0706270:CDS | 40.0% |
| GACCATGAACTTCTACTTGA+AGG | - | chr4_4:79260158-79260177 | Msa0706270:CDS | 40.0% | |
| CACCTTCAAGTAGAAGTTCA+TGG | + | chr4_4:79260163-79260182 | None:intergenic | 40.0% | |
| CATGAACTTCTACTTGAAGG+TGG | - | chr4_4:79260161-79260180 | Msa0706270:CDS | 40.0% | |
| CCGCATCTTTGACACAAATA+AGG | - | chr4_4:79260236-79260255 | Msa0706270:CDS | 40.0% | |
| GAGGTTCTGTAGTCATTCAT+AGG | - | chr4_4:79260347-79260366 | Msa0706270:CDS | 40.0% | |
| TCGACTTCAATCTTTGATGG+TGG | - | chr4_4:79260500-79260519 | Msa0706270:CDS | 40.0% | |
| TCGTGTGGGATAATATGTTC+AGG | - | chr4_4:79260560-79260579 | Msa0706270:intron | 40.0% | |
| ! | TAAGGTGGTATTCCCTTTTG+TGG | - | chr4_4:79260608-79260627 | Msa0706270:intron | 40.0% |
| TGCAGGGATTGAAATTGATG+AGG | - | chr4_4:79260701-79260720 | Msa0706270:intron | 40.0% | |
| CTTGTTCTCCAATGTCTACA+AGG | + | chr4_4:79260866-79260885 | None:intergenic | 40.0% | |
| ! | GTGGTCTTACAAATTCAGAC+TGG | - | chr4_4:79260999-79261018 | Msa0706270:intron | 40.0% |
| CTTCATTACTGCTGGCATAA+TGG | + | chr4_4:79261033-79261052 | None:intergenic | 40.0% | |
| TGCCAGCAGTAATGAAGATA+TGG | - | chr4_4:79261036-79261055 | Msa0706270:intron | 40.0% | |
| TGCCATATCTTCATTACTGC+TGG | + | chr4_4:79261041-79261060 | None:intergenic | 40.0% | |
| ATGAAGATATGGCAACGAGA+CGG | - | chr4_4:79261047-79261066 | Msa0706270:intron | 40.0% | |
| ! | GGTTTATTAGGGTTTTTCCG+AGG | - | chr4_4:79261068-79261087 | Msa0706270:intron | 40.0% |
| ! | TTAGGGTTTTTCCGAGGTAA+TGG | - | chr4_4:79261074-79261093 | Msa0706270:intron | 40.0% |
| ! | TAGGGTTTTTCCGAGGTAAT+GGG | - | chr4_4:79261075-79261094 | Msa0706270:intron | 40.0% |
| CAACATTCAACCCATTACCT+CGG | + | chr4_4:79261088-79261107 | None:intergenic | 40.0% | |
| CAAGGGAACAAGTCAGATAT+TGG | - | chr4_4:79261179-79261198 | Msa0706270:intron | 40.0% | |
| AAGTCAGATATTGGTACTGC+CGG | - | chr4_4:79261188-79261207 | Msa0706270:intron | 40.0% | |
| TTTGTAAGGGTTCCTAGGTT+CGG | + | chr4_4:79261323-79261342 | None:intergenic | 40.0% | |
| TATCCTTTGTAAGGGTTCCT+AGG | + | chr4_4:79261328-79261347 | None:intergenic | 40.0% | |
| TACCAAGAAGAGATGGAACA+AGG | + | chr4_4:79261388-79261407 | None:intergenic | 40.0% | |
| GGAATCATACCAAGAAGAGA+TGG | + | chr4_4:79261395-79261414 | None:intergenic | 40.0% | |
| CTTGGTATGATTCCTTATGC+AGG | - | chr4_4:79261401-79261420 | Msa0706270:intron | 40.0% | |
| CTCTAGTACAACTTGGATGT+GGG | - | chr4_4:79261624-79261643 | Msa0706270:intron | 40.0% | |
| CGTAAATTAAGGGACCAAAG+TGG | + | chr4_4:79261885-79261904 | None:intergenic | 40.0% | |
| TCCTTCTTCTTCTTCTTGCT+GGG | + | chr4_4:79261997-79262016 | None:intergenic | 40.0% | |
| TTCCTTCTTCTTCTTCTTGC+TGG | + | chr4_4:79261998-79262017 | None:intergenic | 40.0% | |
| ATTACATTGCCATGCTTCTC+AGG | - | chr4_4:79262214-79262233 | Msa0706270:CDS | 40.0% | |
| !! | TAAGCACTAGAAGTGTTGGT+AGG | + | chr4_4:79262252-79262271 | None:intergenic | 40.0% |
| ! | CTTGTAAGCACTAGAAGTGT+TGG | + | chr4_4:79262256-79262275 | None:intergenic | 40.0% |
| CAACACTTCTAGTGCTTACA+AGG | - | chr4_4:79262254-79262273 | Msa0706270:CDS | 40.0% | |
| AAATCTCCTCAAAGTTGTGC+CGG | - | chr4_4:79262347-79262366 | Msa0706270:exon | 40.0% | |
| GGCTGCAAGTATTACTTACA+TGG | - | chr4_4:79262368-79262387 | Msa0706270:five_prime_UTR | 40.0% | |
| CTACTTGTAATAGTGCCTAC+AGG | + | chr4_4:79262524-79262543 | None:intergenic | 40.0% | |
| CAAGTAGTGATTCTTCAAGG+AGG | - | chr4_4:79262537-79262556 | Msa0706270:intron | 40.0% | |
| !! | GTGATGGTGGATAGAATTGA+TGG | - | chr4_4:79262758-79262777 | Msa0706270:five_prime_UTR | 40.0% |
| ! | TGATGGACGACATTCTTATG+AGG | - | chr4_4:79262775-79262794 | Msa0706270:five_prime_UTR | 40.0% |
| ATTAAGAGGGGAGAGAGAGA+GGG | + | chr4_4:79258425-79258444 | None:intergenic | 45.0% | |
| AATTAAGAGGGGAGAGAGAG+AGG | + | chr4_4:79258426-79258445 | None:intergenic | 45.0% | |
| ! | TTGAAGAGAGGTGGTGATGA+CGG | + | chr4_4:79258543-79258562 | None:intergenic | 45.0% |
| CTCCAAACCCAAATCATCTC+CGG | - | chr4_4:79258903-79258922 | Msa0706270:CDS | 45.0% | |
| !!! | TTTTTTTCCACGGCCGTGAT+CGG | + | chr4_4:79258944-79258963 | None:intergenic | 45.0% |
| !! | ATTGGCTTTGCGTGAGACTA+AGG | - | chr4_4:79258993-79259012 | Msa0706270:intron | 45.0% |
| TGCGTGAGACTAAGGAAGAA+AGG | - | chr4_4:79259001-79259020 | Msa0706270:intron | 45.0% | |
| GCGTGAGACTAAGGAAGAAA+GGG | - | chr4_4:79259002-79259021 | Msa0706270:intron | 45.0% | |
| ! | AGAGCATCCCAAAGTTCTTC+AGG | + | chr4_4:79259288-79259307 | None:intergenic | 45.0% |
| !! | ACTTTGGGATGCTCTTGTCA+AGG | - | chr4_4:79259293-79259312 | Msa0706270:intron | 45.0% |
| GACCTATGAAGCTCATACAC+CGG | - | chr4_4:79259382-79259401 | Msa0706270:intron | 45.0% | |
| ! | CTTCTGATTGAAGGCGTGTT+TGG | + | chr4_4:79259506-79259525 | None:intergenic | 45.0% |
| ! | CATTAATATTGGTTGGGGGG+TGG | - | chr4_4:79259613-79259632 | Msa0706270:intron | 45.0% |
| GTTACAGCAGCCACAATCAT+AGG | + | chr4_4:79259780-79259799 | None:intergenic | 45.0% | |
| GTTTCTCTACTTATGGGGAG+AGG | + | chr4_4:79259974-79259993 | None:intergenic | 45.0% | |
| AAGTCACTGCCTCTTCTGTA+CGG | - | chr4_4:79260136-79260155 | Msa0706270:CDS | 45.0% | |
| CAAATGTTGAGAGACTGCAG+AGG | - | chr4_4:79260328-79260347 | Msa0706270:CDS | 45.0% | |
| !! | TTTTCAAGGGTTGCTTCGTG+AGG | + | chr4_4:79260816-79260835 | None:intergenic | 45.0% |
| AGGGTATGCCTTGTAGACAT+TGG | - | chr4_4:79260855-79260874 | Msa0706270:intron | 45.0% | |
| GAACAAGCTGTCATTCCTGA+AGG | - | chr4_4:79260879-79260898 | Msa0706270:intron | 45.0% | |
| TTTATTGCAGGGGGAATAGC+AGG | - | chr4_4:79260933-79260952 | Msa0706270:intron | 45.0% | |
| TGCTCCTCTTGATCGTCTAA+AGG | - | chr4_4:79260977-79260996 | Msa0706270:intron | 45.0% | |
| TCCTCTTGATCGTCTAAAGG+TGG | - | chr4_4:79260980-79260999 | Msa0706270:intron | 45.0% | |
| ACCACCTTTAGACGATCAAG+AGG | + | chr4_4:79260984-79261003 | None:intergenic | 45.0% | |
| TGGCAACGAGACGGTTTATT+AGG | - | chr4_4:79261056-79261075 | Msa0706270:intron | 45.0% | |
| GGCAACGAGACGGTTTATTA+GGG | - | chr4_4:79261057-79261076 | Msa0706270:intron | 45.0% | |
| !! | TAAAACTTGATGGCGCTCTC+AGG | + | chr4_4:79261122-79261141 | None:intergenic | 45.0% |
| ! | AAGACTTTTTGCAGGTGGCA+TGG | - | chr4_4:79261211-79261230 | Msa0706270:intron | 45.0% |
| TTACAGACTTGTGCGTCTGA+AGG | - | chr4_4:79261287-79261306 | Msa0706270:intron | 45.0% | |
| GAACCTAGGAACCCTTACAA+AGG | - | chr4_4:79261322-79261341 | Msa0706270:intron | 45.0% | |
| GTGAGATCAATGCCTGCATA+AGG | + | chr4_4:79261416-79261435 | None:intergenic | 45.0% | |
| CCACATCCAAGTTGTACTAG+AGG | + | chr4_4:79261626-79261645 | None:intergenic | 45.0% | |
| CCTCTAGTACAACTTGGATG+TGG | - | chr4_4:79261623-79261642 | Msa0706270:intron | 45.0% | |
| ACTTGGATGTGGGACAGTTT+CGG | - | chr4_4:79261634-79261653 | Msa0706270:intron | 45.0% | |
| TACTTGTGTCTATCCACTGC+AGG | - | chr4_4:79261670-79261689 | Msa0706270:intron | 45.0% | |
| CTTGTACGAATAACCTGCAG+TGG | + | chr4_4:79261686-79261705 | None:intergenic | 45.0% | |
| CACTGCAGGTTATTCGTACA+AGG | - | chr4_4:79261684-79261703 | Msa0706270:intron | 45.0% | |
| AATATGGAGACAAGGCAGGA+AGG | + | chr4_4:79261926-79261945 | None:intergenic | 45.0% | |
| CTCAAATATGGAGACAAGGC+AGG | + | chr4_4:79261930-79261949 | None:intergenic | 45.0% | |
| CGGACTCAAATATGGAGACA+AGG | + | chr4_4:79261934-79261953 | None:intergenic | 45.0% | |
| ACCCAGCAAGAAGAAGAAGA+AGG | - | chr4_4:79261993-79262012 | Msa0706270:CDS | 45.0% | |
| TGGAAAACCCTTAAGGACGA+AGG | - | chr4_4:79262294-79262313 | Msa0706270:CDS | 45.0% | |
| TCGAAAGCCTTCGTCCTTAA+GGG | + | chr4_4:79262304-79262323 | None:intergenic | 45.0% | |
| TTAAGGACGAAGGCTTTCGA+GGG | - | chr4_4:79262304-79262323 | Msa0706270:CDS | 45.0% | |
| ! | GGCACAACTTTGAGGAGATT+TGG | + | chr4_4:79262348-79262367 | None:intergenic | 45.0% |
| TTAAGAGGGGAGAGAGAGAG+GGG | + | chr4_4:79258424-79258443 | None:intergenic | 50.0% | |
| GAAGTCGCCGGAGATGATTT+GGG | + | chr4_4:79258913-79258932 | None:intergenic | 50.0% | |
| AGAAGTCGCCGGAGATGATT+TGG | + | chr4_4:79258914-79258933 | None:intergenic | 50.0% | |
| GTCCGGTGTATGAGCTTCAT+AGG | + | chr4_4:79259387-79259406 | None:intergenic | 50.0% | |
| ! | GCGCTGACACTTCTGATTGA+AGG | + | chr4_4:79259515-79259534 | None:intergenic | 50.0% |
| AACAGTGATCCAATCGGTGC+CGG | - | chr4_4:79260021-79260040 | Msa0706270:CDS | 50.0% | |
| !! | TTTACTGAACCGGCACCGAT+TGG | + | chr4_4:79260033-79260052 | None:intergenic | 50.0% |
| GTTCATGGTCCGTACAGAAG+AGG | + | chr4_4:79260148-79260167 | None:intergenic | 50.0% | |
| CTAGAAATGCGCTGCTTGAG+AGG | - | chr4_4:79260262-79260281 | Msa0706270:CDS | 50.0% | |
| ! | TGCAGCATCAAAGCTGGCTT+TGG | + | chr4_4:79260685-79260704 | None:intergenic | 50.0% |
| ! | AAAGCCAGCTTTGATGCTGC+AGG | - | chr4_4:79260684-79260703 | Msa0706270:intron | 50.0% |
| ! | AAGCCAGCTTTGATGCTGCA+GGG | - | chr4_4:79260685-79260704 | Msa0706270:intron | 50.0% |
| AATCCCTGCAGCATCAAAGC+TGG | + | chr4_4:79260691-79260710 | None:intergenic | 50.0% | |
| ! | ACATGCTTGCTGATGCCTTC+AGG | + | chr4_4:79260897-79260916 | None:intergenic | 50.0% |
| ! | ACTGCCGGAAGACTTTTTGC+AGG | - | chr4_4:79261203-79261222 | Msa0706270:intron | 50.0% |
| GCCACCTGCAAAAAGTCTTC+CGG | + | chr4_4:79261210-79261229 | None:intergenic | 50.0% | |
| TTGTGCGTCTGAAGGTGGAA+AGG | - | chr4_4:79261295-79261314 | Msa0706270:intron | 50.0% | |
| AAGGCCTCTATAGAAAGCCC+GGG | + | chr4_4:79261369-79261388 | None:intergenic | 50.0% | |
| CAAGGCCTCTATAGAAAGCC+CGG | + | chr4_4:79261370-79261389 | None:intergenic | 50.0% | |
| !! | GGCCTTGTTCCATCTCTTCT+TGG | - | chr4_4:79261383-79261402 | Msa0706270:intron | 50.0% |
| CCAAGTTGTACTAGAGGACC+AGG | + | chr4_4:79261620-79261639 | None:intergenic | 50.0% | |
| CCTGGTCCTCTAGTACAACT+TGG | - | chr4_4:79261617-79261636 | Msa0706270:intron | 50.0% | |
| CTTGGATGTGGGACAGTTTC+GGG | - | chr4_4:79261635-79261654 | Msa0706270:intron | 50.0% | |
| CTTCTTCTTCTTGCTGGGTG+AGG | + | chr4_4:79261992-79262011 | None:intergenic | 50.0% | |
| CTCGAAAGCCTTCGTCCTTA+AGG | + | chr4_4:79262305-79262324 | None:intergenic | 50.0% | |
| CTTAAGGACGAAGGCTTTCG+AGG | - | chr4_4:79262303-79262322 | Msa0706270:CDS | 50.0% | |
| AGGCTTTCGAGGGTTCTACA+AGG | - | chr4_4:79262314-79262333 | Msa0706270:CDS | 50.0% | |
| GGCTTTCGAGGGTTCTACAA+GGG | - | chr4_4:79262315-79262334 | Msa0706270:CDS | 50.0% | |
| !! | ATTGGCGCATGGCTTTGTGA+TGG | - | chr4_4:79262742-79262761 | Msa0706270:five_prime_UTR | 50.0% |
| ! | CATGTCTGGGGCCATAGACA+TGG | - | chr4_4:79258867-79258886 | Msa0706270:CDS | 55.0% |
| GCCATAGACATGGACCACGT+GGG | - | chr4_4:79258877-79258896 | Msa0706270:CDS | 55.0% | |
| ACCCACGTGGTCCATGTCTA+TGG | + | chr4_4:79258881-79258900 | None:intergenic | 55.0% | |
| TGGGTTTGGAGAAACCCACG+TGG | + | chr4_4:79258894-79258913 | None:intergenic | 55.0% | |
| ! | CGCCGGAGATGATTTGGGTT+TGG | + | chr4_4:79258908-79258927 | None:intergenic | 55.0% |
| ACTTCTCCGACCACCGATCA+CGG | - | chr4_4:79258928-79258947 | Msa0706270:CDS | 55.0% | |
| CACGGCCGTGGAAAAAAACC+CGG | - | chr4_4:79258946-79258965 | Msa0706270:CDS | 55.0% | |
| TGGGATGCTCTTGTCAAGGC+TGG | - | chr4_4:79259297-79259316 | Msa0706270:intron | 55.0% | |
| TTGTGTCAAAGATGCGGCGC+TGG | + | chr4_4:79260233-79260252 | None:intergenic | 55.0% | |
| TTTGTATGGTGTGTGGGCCG+TGG | - | chr4_4:79260460-79260479 | Msa0706270:CDS | 55.0% | |
| TTGTATGGTGTGTGGGCCGT+GGG | - | chr4_4:79260461-79260480 | Msa0706270:CDS | 55.0% | |
| ATCGGCCTTCACAAGTCCCA+CGG | + | chr4_4:79260480-79260499 | None:intergenic | 55.0% | |
| GCATCAGCAAGCATGTGCAC+AGG | - | chr4_4:79260901-79260920 | Msa0706270:intron | 55.0% | |
| ! | GCCGGAAGACTTTTTGCAGG+TGG | - | chr4_4:79261206-79261225 | Msa0706270:intron | 55.0% |
| ! | CTTTTTGCAGGTGGCATGGC+TGG | - | chr4_4:79261215-79261234 | Msa0706270:intron | 55.0% |
| CAGACTTGTGCGTCTGAAGG+TGG | - | chr4_4:79261290-79261309 | Msa0706270:intron | 55.0% | |
| TATGGATCCAAGAGGGACCC+CGG | - | chr4_4:79261348-79261367 | Msa0706270:intron | 55.0% | |
| AGGCCTCTATAGAAAGCCCG+GGG | + | chr4_4:79261368-79261387 | None:intergenic | 55.0% | |
| TTGCAGCCGGCACAACTTTG+AGG | + | chr4_4:79262356-79262375 | None:intergenic | 55.0% | |
| GGCCATAGACATGGACCACG+TGG | - | chr4_4:79258876-79258895 | Msa0706270:CDS | 60.0% | |
| ! | TTTTCCACGGCCGTGATCGG+TGG | + | chr4_4:79258941-79258960 | None:intergenic | 60.0% |
| CGGTGTGTCAGTGTCGTGTC+CGG | + | chr4_4:79259404-79259423 | None:intergenic | 60.0% | |
| CGGACACGACACTGACACAC+CGG | - | chr4_4:79259402-79259421 | Msa0706270:intron | 60.0% | |
| GGTGGAAAGGCTCCGAACCT+AGG | - | chr4_4:79261308-79261327 | Msa0706270:intron | 60.0% | |
| ATGGATCCAAGAGGGACCCC+GGG | - | chr4_4:79261349-79261368 | Msa0706270:intron | 60.0% | |
| GGACCCCGGGCTTTCTATAG+AGG | - | chr4_4:79261362-79261381 | Msa0706270:intron | 60.0% | |
| GGGACAGTTTCGGGAGCTCT+TGG | - | chr4_4:79261644-79261663 | Msa0706270:intron | 60.0% | |
| TGCCATGCTTCTCAGGCTGC+AGG | - | chr4_4:79262221-79262240 | Msa0706270:CDS | 60.0% | |
| !! | GGCGCATGGCTTTGTGATGG+TGG | - | chr4_4:79262745-79262764 | Msa0706270:five_prime_UTR | 60.0% |
| TCGGTGGTCGGAGAAGTCGC+CGG | + | chr4_4:79258925-79258944 | None:intergenic | 65.0% | |
| GTGGGCCGTGGGACTTGTGA+AGG | - | chr4_4:79260472-79260491 | Msa0706270:CDS | 65.0% | |
| AGAAAGCCCGGGGTCCCTCT+TGG | + | chr4_4:79261358-79261377 | None:intergenic | 65.0% | |
| CGCCTGCAGCCTGAGAAGCA+TGG | + | chr4_4:79262226-79262245 | None:intergenic | 65.0% | |
| CCACGGCCGTGATCGGTGGT+CGG | + | chr4_4:79258937-79258956 | None:intergenic | 70.0% | |
| CCGACCACCGATCACGGCCG+TGG | - | chr4_4:79258934-79258953 | Msa0706270:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 79258421 | 79262804 | 79258421 | ID=Msa0706270;Name=Msa0706270 |
| chr4_4 | mRNA | 79258421 | 79262804 | 79258421 | ID=Msa0706270-mRNA-1;Parent=Msa0706270;Name=Msa0706270-mRNA-1;_AED=0.05;_eAED=0.05;_QI=237|0.75|0.8|1|0.75|0.6|5|376|517 |
| chr4_4 | exon | 79258421 | 79258989 | 79258421 | ID=Msa0706270-mRNA-1:exon:25465;Parent=Msa0706270-mRNA-1 |
| chr4_4 | exon | 79259520 | 79259610 | 79259520 | ID=Msa0706270-mRNA-1:exon:25464;Parent=Msa0706270-mRNA-1 |
| chr4_4 | exon | 79259737 | 79260555 | 79259737 | ID=Msa0706270-mRNA-1:exon:25463;Parent=Msa0706270-mRNA-1 |
| chr4_4 | exon | 79261907 | 79262445 | 79261907 | ID=Msa0706270-mRNA-1:exon:25462;Parent=Msa0706270-mRNA-1 |
| chr4_4 | exon | 79262656 | 79262804 | 79262656 | ID=Msa0706270-mRNA-1:exon:25461;Parent=Msa0706270-mRNA-1 |
| chr4_4 | five_prime_UTR | 79262656 | 79262804 | 79262656 | ID=Msa0706270-mRNA-1:five_prime_utr;Parent=Msa0706270-mRNA-1 |
| chr4_4 | five_prime_UTR | 79262358 | 79262445 | 79262358 | ID=Msa0706270-mRNA-1:five_prime_utr;Parent=Msa0706270-mRNA-1 |
| chr4_4 | CDS | 79261907 | 79262357 | 79261907 | ID=Msa0706270-mRNA-1:cds;Parent=Msa0706270-mRNA-1 |
| chr4_4 | CDS | 79259737 | 79260555 | 79259737 | ID=Msa0706270-mRNA-1:cds;Parent=Msa0706270-mRNA-1 |
| chr4_4 | CDS | 79259520 | 79259610 | 79259520 | ID=Msa0706270-mRNA-1:cds;Parent=Msa0706270-mRNA-1 |
| chr4_4 | CDS | 79258797 | 79258989 | 79258797 | ID=Msa0706270-mRNA-1:cds;Parent=Msa0706270-mRNA-1 |
| chr4_4 | three_prime_UTR | 79258421 | 79258796 | 79258421 | ID=Msa0706270-mRNA-1:three_prime_utr;Parent=Msa0706270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
