AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0216150


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0216150 MtrunA17_Chr2g0317731 91.908 173 13 1 1 172 1 173 1.40e-113 320
Msa0216150 MtrunA17_Chr8g0360031 64.835 182 48 6 1 172 1 176 2.62e-74 220
Msa0216150 MtrunA17_Chr3g0125821 65.600 125 42 1 48 172 50 173 3.73e-61 187
Msa0216150 MtrunA17_Chr4g0044731 53.125 96 45 0 77 172 73 168 2.93e-37 126
Msa0216150 MtrunA17_Chr2g0317721 48.039 102 53 0 69 170 41 142 6.31e-33 114
Msa0216150 MtrunA17_Chr2g0317701 52.941 102 47 1 69 169 46 147 5.15e-32 112
Msa0216150 MtrunA17_Chr2g0317711 48.077 104 53 1 69 172 41 143 7.28e-28 101
Msa0216150 MtrunA17_Chr1g0211871 38.532 109 59 2 69 172 70 175 4.58e-23 90.1
Msa0216150 MtrunA17_Chr1g0201781 33.981 103 68 0 67 169 60 162 3.20e-20 82.4
Msa0216150 MtrunA17_Chr2g0317691 51.562 64 31 0 109 172 3 66 5.98e-20 79.3
Msa0216150 MtrunA17_Chr5g0404831 43.333 90 49 2 83 172 28 115 1.02e-16 72.0
Msa0216150 MtrunA17_Chr4g0052481 42.500 80 43 2 81 158 77 155 6.35e-16 71.2
Msa0216150 MtrunA17_Chr7g0216481 36.145 83 51 2 88 170 51 131 9.06e-16 70.1
Msa0216150 MtrunA17_Chr1g0155721 42.254 71 40 1 88 158 31 100 1.12e-14 66.6
Msa0216150 MtrunA17_Chr3g0142051 40.845 71 41 1 88 158 31 100 6.40e-14 64.7
Msa0216150 MtrunA17_Chr8g0393201 41.975 81 45 2 88 168 252 330 6.58e-14 68.2
Msa0216150 MtrunA17_Chr5g0438731 32.990 97 63 1 60 156 183 277 6.47e-13 65.9
Msa0216150 MtrunA17_Chr5g0438731 35.789 95 60 1 57 150 49 143 7.03e-12 62.8
Msa0216150 MtrunA17_Chr2g0287471 35.106 94 61 0 57 150 18 111 6.77e-11 59.7
Msa0216150 MtrunA17_Chr1g0164481 30.000 90 61 1 83 170 90 179 9.04e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0216150 AT3G15360.1 60.510 157 58 2 20 172 35 191 4.95e-66 200
Msa0216150 AT1G03680.1 53.548 155 68 3 18 172 29 179 2.47e-55 172
Msa0216150 AT4G03520.1 52.632 152 66 4 24 172 37 185 1.19e-53 169
Msa0216150 AT2G15570.1 50.450 111 52 1 62 172 64 171 1.83e-37 127
Msa0216150 AT2G15570.2 49.550 111 54 1 62 172 64 172 3.00e-37 126
Msa0216150 AT4G03520.2 63.380 71 26 0 102 172 1 71 1.38e-29 103
Msa0216150 AT1G76760.1 36.792 106 67 0 67 172 63 168 5.21e-23 90.1
Msa0216150 AT1G43560.1 34.266 143 84 2 35 172 26 163 2.09e-22 88.6
Msa0216150 AT1G50320.1 33.577 137 76 2 38 172 53 176 4.51e-21 85.5
Msa0216150 AT1G19730.1 42.105 76 44 0 83 158 26 101 4.47e-18 75.9
Msa0216150 AT4G12170.1 40.860 93 55 0 69 161 51 143 2.57e-17 75.1
Msa0216150 AT3G51030.1 44.444 90 48 2 83 172 26 113 5.14e-17 73.2
Msa0216150 AT5G42980.1 39.773 88 51 2 83 170 25 110 1.04e-16 72.4
Msa0216150 AT5G39950.1 36.471 85 50 2 77 158 36 119 1.71e-14 67.0
Msa0216150 AT2G35010.2 32.530 166 95 6 9 158 16 180 2.01e-14 68.2
Msa0216150 AT2G35010.1 32.530 166 95 6 9 158 16 180 2.01e-14 68.2
Msa0216150 AT1G52990.1 40.741 81 47 1 82 161 223 303 4.58e-14 68.9
Msa0216150 AT1G45145.1 36.842 76 47 1 83 158 25 99 1.27e-13 64.3
Msa0216150 AT2G32920.1 30.233 129 79 3 18 146 124 241 1.97e-12 64.7
Msa0216150 AT2G32920.1 36.585 82 52 0 69 150 32 113 6.57e-11 60.1
Msa0216150 AT1G31020.1 35.065 77 47 2 83 157 69 144 2.81e-12 61.6
Msa0216150 AT3G54960.1 33.010 103 68 1 68 170 100 201 8.72e-12 62.8
Msa0216150 AT3G54960.2 33.010 103 68 1 68 170 100 201 1.41e-11 62.4
Msa0216150 AT1G04980.1 27.731 119 83 1 28 146 131 246 2.24e-11 61.6
Msa0216150 AT1G04980.1 36.585 82 52 0 69 150 34 115 3.83e-11 60.8
Msa0216150 AT1G59730.1 33.673 98 60 3 76 170 31 126 5.64e-11 57.8
Msa0216150 AT1G69880.1 34.286 70 45 1 88 157 62 130 5.94e-11 58.2
Msa0216150 AT4G04950.1 28.750 80 56 1 83 162 19 97 9.12e-11 59.7

Find 69 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTGTGTTGGTCGAATTC+TGG 0.102485 2_1:+61859235 Msa0216150:CDS
CTTTCTTAAATAATCGTTTA+TGG 0.132258 2_1:+61859597 Msa0216150:three_prime_UTR
CGACGATTGGAGAGCGAATA+AGG 0.177500 2_1:-61856283 None:intergenic
CAAACTTGAGATAAGATAAT+TGG 0.228833 2_1:-61859565 None:intergenic
CTTTGCTAGCTCATCAACTA+TGG 0.233293 2_1:-61859292 None:intergenic
CTTCTATTACTGATGGAAAT+TGG 0.291432 2_1:+61859187 Msa0216150:CDS
GCTTTATGATATGTCGCTAA+TGG 0.299425 2_1:-61859543 None:intergenic
TCCTGTGTTGGTCGAATTCT+GGG 0.312332 2_1:+61859236 Msa0216150:CDS
TTTATGGTGTTGTATAGTTA+TGG 0.316211 2_1:+61859613 Msa0216150:three_prime_UTR
CAATTATCTTATCTCAAGTT+TGG 0.319499 2_1:+61859566 Msa0216150:three_prime_UTR
ATTTGTGGTCAATGTTGCTT+TGG 0.336888 2_1:-61859457 None:intergenic
CTTTATGATATGTCGCTAAT+GGG 0.369840 2_1:-61859542 None:intergenic
GAAAAGAAAGATACAGTTAT+TGG 0.371482 2_1:+61859426 Msa0216150:CDS
GACGATTGGAGAGCGAATAA+GGG 0.423584 2_1:-61856282 None:intergenic
CCTTCAGTTGCTACTCGGTA+TGG 0.423871 2_1:+61859363 Msa0216150:CDS
TTATGGTGTTGTATAGTTAT+GGG 0.430717 2_1:+61859614 Msa0216150:three_prime_UTR
TTTGTGGTCAATGTTGCTTT+GGG 0.452585 2_1:-61859456 None:intergenic
GAGGAAACGCGGCAGTGCTC+AGG 0.460069 2_1:-61856313 None:intergenic
GACGAGTGGCGGAGACTTGT+CGG 0.467548 2_1:-61856355 None:intergenic
AAAATGCCAGTGATGTCAAA+TGG 0.470133 2_1:-61859723 None:intergenic
TATGGGATGCTTCCATATTG+TGG 0.480198 2_1:+61859631 Msa0216150:three_prime_UTR
TTCTTTGTCTGCCATCTCAC+AGG 0.484524 2_1:-61859491 None:intergenic
TGAAATCCATTTGACATCAC+TGG 0.489313 2_1:+61859717 Msa0216150:three_prime_UTR
CGTGATAACACAGCCGTTGA+AGG 0.489745 2_1:+61856437 Msa0216150:CDS
CTTCAGTTGCTACTCGGTAT+GGG 0.494438 2_1:+61859364 Msa0216150:CDS
CTCAGGCGAGAAGCGACGAT+TGG 0.501881 2_1:-61856296 None:intergenic
AGCTTGAGGCCGGTGTATTG+AGG 0.508457 2_1:-61856332 None:intergenic
CAGACAAAGAAGGCTTCAGC+TGG 0.512145 2_1:+61859503 Msa0216150:three_prime_UTR
ATTGCAGAGAATCGTAGCTC+TGG 0.518630 2_1:-61856230 None:intergenic
GACTTGTCGGAGCTTGAGGC+CGG 0.525223 2_1:-61856342 None:intergenic
GCAGTGGCTTCTATTACTGA+TGG 0.533416 2_1:+61859180 Msa0216150:intron
TTCTTGAAGAAAATGACAGT+TGG 0.533751 2_1:-61859399 None:intergenic
AACCGAACCCTAACCTTCAA+CGG 0.535342 2_1:-61856450 None:intergenic
GCTACGATTCTCTGCAATCA+TGG 0.535366 2_1:+61856235 Msa0216150:exon
TTTGCTAGCTCATCAACTAT+GGG 0.536511 2_1:-61859291 None:intergenic
TATGGGATGAATCATGCGGC+AGG 0.560107 2_1:-61859274 None:intergenic
TGGTCGAATTCTGGGCTCCA+TGG 0.560925 2_1:+61859244 Msa0216150:CDS
ATTGTTGTGGAATATATTAG+CGG 0.561154 2_1:+61856091 None:intergenic
AGAATCTGAGATTCCTGTGT+TGG 0.562341 2_1:+61859224 Msa0216150:CDS
CGGAGACTTGTCGGAGCTTG+AGG 0.562528 2_1:-61856346 None:intergenic
AAGTCTCCGCCACTCGTCTG+CGG 0.566372 2_1:+61856360 Msa0216150:CDS
TCGAATGTTGTTCGTCGCGG+TGG 0.566799 2_1:+61856395 Msa0216150:CDS
ACCGCGACGAACAACATTCG+AGG 0.568696 2_1:-61856393 None:intergenic
TGTGAGATGGCAGACAAAGA+AGG 0.570704 2_1:+61859493 Msa0216150:exon
CGGTGGAACCGTCGTGTGTG+AGG 0.573215 2_1:+61856412 Msa0216150:CDS
GGAGAAGGATTCGAGTTGTA+CGG 0.584874 2_1:-61856261 None:intergenic
GAATTCTGGGCTCCATGGTG+TGG 0.587228 2_1:+61859249 Msa0216150:CDS
AATCTCAGATTCTATGACAA+GGG 0.589830 2_1:-61859214 None:intergenic
GCCCAGAATTCGACCAACAC+AGG 0.591293 2_1:-61859237 None:intergenic
ATGCGGCAGGGACCACACCA+TGG 0.592003 2_1:-61859261 None:intergenic
CGACGAACAACATTCGAGGC+GGG 0.593567 2_1:-61856389 None:intergenic
TGGAGAGCGAATAAGGGAGA+AGG 0.600317 2_1:-61856276 None:intergenic
TTGACTCCGCAGACGAGTGG+CGG 0.600852 2_1:-61856366 None:intergenic
GAGCTAGCAAAGGAATATGC+GGG 0.603263 2_1:+61859303 Msa0216150:CDS
AAAGTCCTTCAGTTGCTACT+CGG 0.607500 2_1:+61859358 Msa0216150:CDS
GGGTTGACTCCGCAGACGAG+TGG 0.610441 2_1:-61856369 None:intergenic
CATAGTTGATGAGCTAGCAA+AGG 0.630561 2_1:+61859293 Msa0216150:CDS
GCCTCGAATGTTGTTCGTCG+CGG 0.633957 2_1:+61856392 Msa0216150:CDS
TTCAACTTGATAAAATAGAG+CGG 0.635619 2_1:-61859698 None:intergenic
CCATACCGAGTAGCAACTGA+AGG 0.641503 2_1:-61859363 None:intergenic
ATGGGATGAATCATGCGGCA+GGG 0.655515 2_1:-61859273 None:intergenic
TGAGCTAGCAAAGGAATATG+CGG 0.658244 2_1:+61859302 Msa0216150:CDS
CAACTATGGGATGAATCATG+CGG 0.659788 2_1:-61859278 None:intergenic
GAATCTCAGATTCTATGACA+AGG 0.685810 2_1:-61859215 None:intergenic
ATCACGAGCCTCACACACGA+CGG 0.693040 2_1:-61856420 None:intergenic
GCCGGTGTATTGAGGAAACG+CGG 0.696706 2_1:-61856324 None:intergenic
GCCGCGTTTCCTCAATACAC+CGG 0.698489 2_1:+61856323 Msa0216150:CDS
GCGACGAACAACATTCGAGG+CGG 0.707036 2_1:-61856390 None:intergenic
GAGCGAGTGAGAGAGACTAG+CGG 0.745613 2_1:-61856198 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTGAAAAACATAAA+TGG - chr2_1:61858999-61859018 None:intergenic 10.0%
!!! TAGTTAAACTTATGTTTTAT+TGG + chr2_1:61859152-61859171 Msa0216150:intron 15.0%
!!! TAGTATCTGTTGTTTTTATT+TGG - chr2_1:61856160-61856179 None:intergenic 20.0%
!! AAAAGAATGATACACTAAAA+GGG - chr2_1:61856725-61856744 None:intergenic 20.0%
!! TAAAAGAATGATACACTAAA+AGG - chr2_1:61856726-61856745 None:intergenic 20.0%
!!! TTTGAAACTATTAACTAGTT+AGG - chr2_1:61857484-61857503 None:intergenic 20.0%
!!! ATAAATATTTATTTGGAACG+TGG - chr2_1:61857512-61857531 None:intergenic 20.0%
!! AACCTAACATTATGAATATT+AGG - chr2_1:61857597-61857616 None:intergenic 20.0%
!!! TAACACCATAATTACTTTTA+GGG - chr2_1:61858463-61858482 None:intergenic 20.0%
!! ACAAATACAAAGTAAGATAT+TGG - chr2_1:61858668-61858687 None:intergenic 20.0%
!! TAAAAATAAAATCAGAGTTC+TGG - chr2_1:61858759-61858778 None:intergenic 20.0%
!! CTAAAAATATATGTTCAAGT+TGG - chr2_1:61858819-61858838 None:intergenic 20.0%
!! CTTTCTTAAATAATCGTTTA+TGG + chr2_1:61859597-61859616 Msa0216150:three_prime_UTR 20.0%
!! TTATCTAAAAAACCACAATA+TGG - chr2_1:61859646-61859665 None:intergenic 20.0%
!!! AAAAATTTAAGGCAACATAT+TGG - chr2_1:61859678-61859697 None:intergenic 20.0%
!! TTGGAAGATAATATTTTCTG+TGG - chr2_1:61856141-61856160 None:intergenic 25.0%
! AAAACATTGACATTAACTGA+CGG + chr2_1:61856789-61856808 Msa0216150:intron 25.0%
! TAACTAGTTAGGAATGTATT+TGG - chr2_1:61857473-61857492 None:intergenic 25.0%
! CATATATGTCAGTTATTCAA+GGG - chr2_1:61857979-61857998 None:intergenic 25.0%
! TCATATATGTCAGTTATTCA+AGG - chr2_1:61857980-61857999 None:intergenic 25.0%
! AGAACTTCCTTTAATAAAGA+TGG + chr2_1:61858130-61858149 Msa0216150:intron 25.0%
! AGCTACTACCTTATTAATTT+AGG + chr2_1:61858301-61858320 Msa0216150:intron 25.0%
! CATTTCCCTAAAAGTAATTA+TGG + chr2_1:61858455-61858474 Msa0216150:intron 25.0%
!!! CTAACACCATAATTACTTTT+AGG - chr2_1:61858464-61858483 None:intergenic 25.0%
!!! TATTAGATTTTGAAGCATTC+AGG + chr2_1:61858548-61858567 Msa0216150:intron 25.0%
! GTACTAATACTAGTATTTGT+TGG + chr2_1:61858588-61858607 Msa0216150:intron 25.0%
! TTTCAATAAGCATGCTAAAA+TGG + chr2_1:61858696-61858715 Msa0216150:intron 25.0%
! GAAAAGAAAGATACAGTTAT+TGG + chr2_1:61859426-61859445 Msa0216150:CDS 25.0%
!! CAGGAATTTTTCTATATTTG+TGG - chr2_1:61859475-61859494 None:intergenic 25.0%
! CAAACTTGAGATAAGATAAT+TGG - chr2_1:61859568-61859587 None:intergenic 25.0%
! CAATTATCTTATCTCAAGTT+TGG + chr2_1:61859566-61859585 Msa0216150:three_prime_UTR 25.0%
!!! TTTATGGTGTTGTATAGTTA+TGG + chr2_1:61859613-61859632 Msa0216150:three_prime_UTR 25.0%
!!! TTATGGTGTTGTATAGTTAT+GGG + chr2_1:61859614-61859633 Msa0216150:three_prime_UTR 25.0%
! AAATAGAGCGGAAAAATTTA+AGG - chr2_1:61859689-61859708 None:intergenic 25.0%
! TTCAACTTGATAAAATAGAG+CGG - chr2_1:61859701-61859720 None:intergenic 25.0%
TTAGATCTGTTGAAAGTGAT+TGG + chr2_1:61856510-61856529 Msa0216150:intron 30.0%
TAGGTGACTTACAAAACTAA+CGG - chr2_1:61856596-61856615 None:intergenic 30.0%
!!! TTTTAAAACTCTAGCAACTG+GGG - chr2_1:61856629-61856648 None:intergenic 30.0%
!!! CTTTTAAAACTCTAGCAACT+GGG - chr2_1:61856630-61856649 None:intergenic 30.0%
CTGAAATTTAGTGTACGTAT+TGG + chr2_1:61856650-61856669 Msa0216150:intron 30.0%
AAACATTGACATTAACTGAC+GGG + chr2_1:61856790-61856809 Msa0216150:intron 30.0%
TTTCATGTGTTTCGGATTAT+GGG - chr2_1:61856846-61856865 None:intergenic 30.0%
CTTCAATTGTAGACATTGAA+AGG + chr2_1:61856999-61857018 Msa0216150:intron 30.0%
AGTCTACATTGCACTAAAAA+GGG + chr2_1:61857090-61857109 Msa0216150:intron 30.0%
TATATATTAAAAGAGCCACG+TGG + chr2_1:61857309-61857328 Msa0216150:intron 30.0%
GGCCTAATATTCATAATGTT+AGG + chr2_1:61857592-61857611 Msa0216150:intron 30.0%
ATTGAACATCATCACACATA+AGG + chr2_1:61857650-61857669 Msa0216150:intron 30.0%
AAAAACTGCATAACATGCTT+AGG - chr2_1:61857736-61857755 None:intergenic 30.0%
! TAAGCATGTTATGCAGTTTT+TGG + chr2_1:61857735-61857754 Msa0216150:intron 30.0%
!! TTTCACTAAATGCCACTTTA+TGG + chr2_1:61857758-61857777 Msa0216150:intron 30.0%
!! TTCACTAAATGCCACTTTAT+GGG + chr2_1:61857759-61857778 Msa0216150:intron 30.0%
AAAATAACAGACCCATAAAG+TGG - chr2_1:61857773-61857792 None:intergenic 30.0%
GTTGCTTACTCTAATAGTTA+TGG + chr2_1:61857797-61857816 Msa0216150:intron 30.0%
ACTCTAATAGTTATGGACAA+AGG + chr2_1:61857804-61857823 Msa0216150:intron 30.0%
TATAACTCATCTAATCAACG+AGG - chr2_1:61858038-61858057 None:intergenic 30.0%
TTGTGTTGAGTCTAATTACA+TGG + chr2_1:61858078-61858097 Msa0216150:intron 30.0%
CTGTTTATGAGTATTAGTGT+TGG + chr2_1:61858186-61858205 Msa0216150:intron 30.0%
!! ACTAGTATTTGTTGGTAACT+AGG + chr2_1:61858596-61858615 Msa0216150:intron 30.0%
CAAAGTAAGATATTGGTCAA+AGG - chr2_1:61858661-61858680 None:intergenic 30.0%
! TGCTAAAATGGTATAGCTTT+TGG + chr2_1:61858708-61858727 Msa0216150:intron 30.0%
!! TGTTTTATTGGATATTGCAG+TGG + chr2_1:61859164-61859183 Msa0216150:intron 30.0%
CTTCTATTACTGATGGAAAT+TGG + chr2_1:61859187-61859206 Msa0216150:CDS 30.0%
AATCTCAGATTCTATGACAA+GGG - chr2_1:61859217-61859236 None:intergenic 30.0%
TTCTTGAAGAAAATGACAGT+TGG - chr2_1:61859402-61859421 None:intergenic 30.0%
!!! ACTGTCATTTTCTTCAAGAA+CGG + chr2_1:61859402-61859421 Msa0216150:CDS 30.0%
ATAGAAAAATTCCTGTGAGA+TGG + chr2_1:61859480-61859499 Msa0216150:exon 30.0%
CTTTATGATATGTCGCTAAT+GGG - chr2_1:61859545-61859564 None:intergenic 30.0%
! GATAATATTTTCTGTGGACG+AGG - chr2_1:61856135-61856154 None:intergenic 35.0%
ATTCTTACTCACAGTCACAT+AGG - chr2_1:61856546-61856565 None:intergenic 35.0%
CAACTGGGGAAAAAAAATCT+AGG - chr2_1:61856615-61856634 None:intergenic 35.0%
!!! GCTTTTAAAACTCTAGCAAC+TGG - chr2_1:61856631-61856650 None:intergenic 35.0%
GCAAACAAACATTCAGAATG+AGG + chr2_1:61856758-61856777 Msa0216150:intron 35.0%
GTTTCATGTGTTTCGGATTA+TGG - chr2_1:61856847-61856866 None:intergenic 35.0%
TGCGTATGTTTCATGTGTTT+CGG - chr2_1:61856854-61856873 None:intergenic 35.0%
TTGAAAGGCCTCTCAATTAT+AGG + chr2_1:61857014-61857033 Msa0216150:intron 35.0%
GAGTCTACATTGCACTAAAA+AGG + chr2_1:61857089-61857108 Msa0216150:intron 35.0%
ACAACCTCTTGTGTAAAACA+GGG - chr2_1:61857195-61857214 None:intergenic 35.0%
AACAACCTCTTGTGTAAAAC+AGG - chr2_1:61857196-61857215 None:intergenic 35.0%
! TCTTTAAGAGCCATACAAAC+TGG + chr2_1:61857431-61857450 Msa0216150:intron 35.0%
AAAGCCCCAAACCAAATATT+GGG - chr2_1:61857625-61857644 None:intergenic 35.0%
TAAAGCCCCAAACCAAATAT+TGG - chr2_1:61857626-61857645 None:intergenic 35.0%
TAAGGTGAAGTTGTTAACCA+TGG + chr2_1:61857668-61857687 Msa0216150:intron 35.0%
AAGGTGAAGTTGTTAACCAT+GGG + chr2_1:61857669-61857688 Msa0216150:intron 35.0%
!!! CCATTTTTTCTATTTGCCCA+TGG - chr2_1:61857688-61857707 None:intergenic 35.0%
CCATGGGCAAATAGAAAAAA+TGG + chr2_1:61857685-61857704 Msa0216150:intron 35.0%
TCATGCTAAGATACTACAGA+AGG - chr2_1:61857909-61857928 None:intergenic 35.0%
GATTAGATGAGTTATACGAC+AGG + chr2_1:61858042-61858061 Msa0216150:intron 35.0%
TCTGATTCTCTCAATCAATG+GGG - chr2_1:61858162-61858181 None:intergenic 35.0%
CTCTGATTCTCTCAATCAAT+GGG - chr2_1:61858163-61858182 None:intergenic 35.0%
TCTCTGATTCTCTCAATCAA+TGG - chr2_1:61858164-61858183 None:intergenic 35.0%
! AGTATTAGTGTTGGAACTCT+TGG + chr2_1:61858195-61858214 Msa0216150:intron 35.0%
GTTGGAACTCTTGGAATTAA+AGG + chr2_1:61858204-61858223 Msa0216150:intron 35.0%
AGGATAAATTGAATGTCGAG+CGG + chr2_1:61858224-61858243 Msa0216150:intron 35.0%
CACGAAGGCCTAAATTAATA+AGG - chr2_1:61858312-61858331 None:intergenic 35.0%
CCTTCGTGTTATAGAAGTAA+GGG + chr2_1:61858324-61858343 Msa0216150:intron 35.0%
!! TTTCTTAACTTGTGCCCTAA+GGG - chr2_1:61858365-61858384 None:intergenic 35.0%
! AAATGATAACTTGTGCCCTT+GGG - chr2_1:61858440-61858459 None:intergenic 35.0%
!! AGTTCTGGTTCTTGTTTCTT+CGG - chr2_1:61858744-61858763 None:intergenic 35.0%
TATTTGAATCTGTGACCTCA+AGG - chr2_1:61858888-61858907 None:intergenic 35.0%
GAGGTCACAGATTCAAATAT+TGG + chr2_1:61858889-61858908 Msa0216150:intron 35.0%
! ATTTGCATGTTTTGCAGTTC+AGG + chr2_1:61859036-61859055 Msa0216150:intron 35.0%
GAATCTCAGATTCTATGACA+AGG - chr2_1:61859218-61859237 None:intergenic 35.0%
TTTGCTAGCTCATCAACTAT+GGG - chr2_1:61859294-61859313 None:intergenic 35.0%
!! TTTGTGGTCAATGTTGCTTT+GGG - chr2_1:61859459-61859478 None:intergenic 35.0%
! ATTTGTGGTCAATGTTGCTT+TGG - chr2_1:61859460-61859479 None:intergenic 35.0%
GCTTTATGATATGTCGCTAA+TGG - chr2_1:61859546-61859565 None:intergenic 35.0%
TGAAATCCATTTGACATCAC+TGG + chr2_1:61859717-61859736 Msa0216150:three_prime_UTR 35.0%
! CGGAGGAACTAATTTGTCAT+TGG - chr2_1:61856576-61856595 None:intergenic 40.0%
GTGACTTACAAAACTAACGG+AGG - chr2_1:61856593-61856612 None:intergenic 40.0%
AATACCCAGCTAAGGTGAAA+TGG + chr2_1:61856813-61856832 Msa0216150:intron 40.0%
! AGTGGTGGGATTTGATATGT+AGG - chr2_1:61856891-61856910 None:intergenic 40.0%
! AGGGGAGATTTAGTTTCAAG+GGG - chr2_1:61856919-61856938 None:intergenic 40.0%
! GAGGGGAGATTTAGTTTCAA+GGG - chr2_1:61856920-61856939 None:intergenic 40.0%
! TGAGGGGAGATTTAGTTTCA+AGG - chr2_1:61856921-61856940 None:intergenic 40.0%
TCCTAGGAGGGAAATAGAAA+GGG - chr2_1:61856946-61856965 None:intergenic 40.0%
ATCCTAGGAGGGAAATAGAA+AGG - chr2_1:61856947-61856966 None:intergenic 40.0%
AGGAATAAGGAACCCAATCT+TGG - chr2_1:61857053-61857072 None:intergenic 40.0%
TGGGTTCCTTATTCCTATCA+TGG + chr2_1:61857057-61857076 Msa0216150:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr2_1:61857164-61857183 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG - chr2_1:61857190-61857209 None:intergenic 40.0%
! CTTACCCTGTTTTACACAAG+AGG + chr2_1:61857188-61857207 Msa0216150:intron 40.0%
! TTACACAAGAGGTTGTTTCC+AGG + chr2_1:61857199-61857218 Msa0216150:intron 40.0%
CGGGTAAAAAATTAGCATGC+GGG - chr2_1:61857380-61857399 None:intergenic 40.0%
GCGGGTAAAAAATTAGCATG+CGG - chr2_1:61857381-61857400 None:intergenic 40.0%
!!! ATGCTAATTTTTTACCCGCG+TGG + chr2_1:61857382-61857401 Msa0216150:intron 40.0%
ACATTGTTGAAGTCATGCAG+TGG - chr2_1:61857408-61857427 None:intergenic 40.0%
! CTTGGTGACACTGAACAAAA+TGG - chr2_1:61857545-61857564 None:intergenic 40.0%
! TAGGTTGAGCTCCCAATATT+TGG + chr2_1:61857611-61857630 Msa0216150:intron 40.0%
TGAGCTCCCAATATTTGGTT+TGG + chr2_1:61857616-61857635 Msa0216150:intron 40.0%
! GAGCTCCCAATATTTGGTTT+GGG + chr2_1:61857617-61857636 Msa0216150:intron 40.0%
!! AGCTCCCAATATTTGGTTTG+GGG + chr2_1:61857618-61857637 Msa0216150:intron 40.0%
GTTATGGACAAAGGCTTTCT+TGG + chr2_1:61857813-61857832 Msa0216150:intron 40.0%
! AGCTAGAATCGCTCGAATTT+TGG - chr2_1:61857840-61857859 None:intergenic 40.0%
! CCATTCAAGAGCATGTGAAT+TGG - chr2_1:61857945-61857964 None:intergenic 40.0%
CCAATTCACATGCTCTTGAA+TGG + chr2_1:61857942-61857961 Msa0216150:intron 40.0%
GGTGGGACCATCTTTATTAA+AGG - chr2_1:61858140-61858159 None:intergenic 40.0%
CTGATTCTCTCAATCAATGG+GGG - chr2_1:61858161-61858180 None:intergenic 40.0%
GCCTTCGTGTTATAGAAGTA+AGG + chr2_1:61858323-61858342 Msa0216150:intron 40.0%
CCCTTACTTCTATAACACGA+AGG - chr2_1:61858327-61858346 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG + chr2_1:61858347-61858366 Msa0216150:intron 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG + chr2_1:61858348-61858367 Msa0216150:intron 40.0%
!! GTTTCTTAACTTGTGCCCTA+AGG - chr2_1:61858366-61858385 None:intergenic 40.0%
CTTCTAAACTTGTACCCCAA+GGG + chr2_1:61858422-61858441 Msa0216150:intron 40.0%
! AATGATAACTTGTGCCCTTG+GGG - chr2_1:61858439-61858458 None:intergenic 40.0%
! GAAATGATAACTTGTGCCCT+TGG - chr2_1:61858441-61858460 None:intergenic 40.0%
! AGGTCACATTGGTTGAATCA+AGG - chr2_1:61858868-61858887 None:intergenic 40.0%
ATTCAACCAATGTGACCTTG+AGG + chr2_1:61858870-61858889 Msa0216150:intron 40.0%
TCTTAAGCATACAAGCAGAG+AGG - chr2_1:61858921-61858940 None:intergenic 40.0%
TTACTCAGACTGCAACTGAT+GGG + chr2_1:61858954-61858973 Msa0216150:intron 40.0%
! AGAATCTGAGATTCCTGTGT+TGG + chr2_1:61859224-61859243 Msa0216150:CDS 40.0%
CAACTATGGGATGAATCATG+CGG - chr2_1:61859281-61859300 None:intergenic 40.0%
CTTTGCTAGCTCATCAACTA+TGG - chr2_1:61859295-61859314 None:intergenic 40.0%
!! CATAGTTGATGAGCTAGCAA+AGG + chr2_1:61859293-61859312 Msa0216150:CDS 40.0%
TGAGCTAGCAAAGGAATATG+CGG + chr2_1:61859302-61859321 Msa0216150:CDS 40.0%
AAAGTCCTTCAGTTGCTACT+CGG + chr2_1:61859358-61859377 Msa0216150:CDS 40.0%
TATGGGATGCTTCCATATTG+TGG + chr2_1:61859631-61859650 Msa0216150:three_prime_UTR 40.0%
ATTGCAGAGAATCGTAGCTC+TGG - chr2_1:61856233-61856252 None:intergenic 45.0%
GCTACGATTCTCTGCAATCA+TGG + chr2_1:61856235-61856254 Msa0216150:exon 45.0%
!! GGAGAAGGATTCGAGTTGTA+CGG - chr2_1:61856264-61856283 None:intergenic 45.0%
GACGATTGGAGAGCGAATAA+GGG - chr2_1:61856285-61856304 None:intergenic 45.0%
TAACACAGCCGTTGAAGGTT+AGG + chr2_1:61856442-61856461 Msa0216150:intron 45.0%
AACACAGCCGTTGAAGGTTA+GGG + chr2_1:61856443-61856462 Msa0216150:intron 45.0%
AACCGAACCCTAACCTTCAA+CGG - chr2_1:61856453-61856472 None:intergenic 45.0%
TACGTATTGGAACCCCTTTC+CGG + chr2_1:61856663-61856682 Msa0216150:intron 45.0%
ATAAAGCTCCCGCATACGTA+GGG - chr2_1:61856690-61856709 None:intergenic 45.0%
AATAAAGCTCCCGCATACGT+AGG - chr2_1:61856691-61856710 None:intergenic 45.0%
GGTGGGATTTGATATGTAGG+TGG - chr2_1:61856888-61856907 None:intergenic 45.0%
TAGTTTCAAGGGGGAGAAAG+TGG - chr2_1:61856909-61856928 None:intergenic 45.0%
! GGGGAGATTTAGTTTCAAGG+GGG - chr2_1:61856918-61856937 None:intergenic 45.0%
CTAGGAGGGAAATAGAAAGG+GGG - chr2_1:61856944-61856963 None:intergenic 45.0%
CCTAGGAGGGAAATAGAAAG+GGG - chr2_1:61856945-61856964 None:intergenic 45.0%
CCTCGACACCTATAATTGAG+AGG - chr2_1:61857025-61857044 None:intergenic 45.0%
! CCTCTCAATTATAGGTGTCG+AGG + chr2_1:61857022-61857041 Msa0216150:intron 45.0%
TGTCGAGGAAACACCAAGAT+TGG + chr2_1:61857037-61857056 Msa0216150:intron 45.0%
GTCGAGGAAACACCAAGATT+GGG + chr2_1:61857038-61857057 Msa0216150:intron 45.0%
GAGGCTCCATGATAGGAATA+AGG - chr2_1:61857066-61857085 None:intergenic 45.0%
ATTCCTATCATGGAGCCTCA+TGG + chr2_1:61857067-61857086 Msa0216150:intron 45.0%
AGTGCAATGTAGACTCCATG+AGG - chr2_1:61857085-61857104 None:intergenic 45.0%
TTGCACTAAAAAGGGCAACC+CGG + chr2_1:61857098-61857117 Msa0216150:intron 45.0%
GCGTACAATACACCAAATGG+TGG - chr2_1:61857165-61857184 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr2_1:61857168-61857187 None:intergenic 45.0%
GCGTAAGTTGCCAGTTTGTA+TGG - chr2_1:61857444-61857463 None:intergenic 45.0%
AGTGTCACCAAGACACTTCT+GGG + chr2_1:61857553-61857572 Msa0216150:intron 45.0%
! CTGGGTGGGTTCACAATATT+TGG + chr2_1:61857571-61857590 Msa0216150:intron 45.0%
GATACTACAGAAGGCTGCAA+AGG - chr2_1:61857900-61857919 None:intergenic 45.0%
TTCTCTCAATCAATGGGGGT+GGG - chr2_1:61858157-61858176 None:intergenic 45.0%
ATTCTCTCAATCAATGGGGG+TGG - chr2_1:61858158-61858177 None:intergenic 45.0%
GGTCCAATACCATCTTCAGA+GGG + chr2_1:61858245-61858264 Msa0216150:intron 45.0%
GTCCAATACCATCTTCAGAG+GGG + chr2_1:61858246-61858265 Msa0216150:intron 45.0%
GCTTCTAAACTTGTACCCCA+AGG + chr2_1:61858421-61858440 Msa0216150:intron 45.0%
AGCATTCAGGATTGATGTGC+TGG + chr2_1:61858561-61858580 Msa0216150:intron 45.0%
ATTCAGGATTGATGTGCTGG+TGG + chr2_1:61858564-61858583 Msa0216150:intron 45.0%
! TGGTTCTTGTTTCTTCGGCT+GGG - chr2_1:61858739-61858758 None:intergenic 45.0%
CATCAGTTGCAGTCTGAGTA+AGG - chr2_1:61858955-61858974 None:intergenic 45.0%
CTTACTCAGACTGCAACTGA+TGG + chr2_1:61858953-61858972 Msa0216150:intron 45.0%
GCAGTGGCTTCTATTACTGA+TGG + chr2_1:61859180-61859199 Msa0216150:intron 45.0%
! TTCCTGTGTTGGTCGAATTC+TGG + chr2_1:61859235-61859254 Msa0216150:CDS 45.0%
! TCCTGTGTTGGTCGAATTCT+GGG + chr2_1:61859236-61859255 Msa0216150:CDS 45.0%
GAGCTAGCAAAGGAATATGC+GGG + chr2_1:61859303-61859322 Msa0216150:CDS 45.0%
CTTCAGTTGCTACTCGGTAT+GGG + chr2_1:61859364-61859383 Msa0216150:CDS 45.0%
TTCTTTGTCTGCCATCTCAC+AGG - chr2_1:61859494-61859513 None:intergenic 45.0%
TGTGAGATGGCAGACAAAGA+AGG + chr2_1:61859493-61859512 Msa0216150:exon 45.0%
!! AATTTCAATAAATATTTATT+TGG - chr2_1:61857519-61857538 None:intergenic 5.0%
TGGAGAGCGAATAAGGGAGA+AGG - chr2_1:61856279-61856298 None:intergenic 50.0%
CGACGATTGGAGAGCGAATA+AGG - chr2_1:61856286-61856305 None:intergenic 50.0%
CGTGATAACACAGCCGTTGA+AGG + chr2_1:61856437-61856456 Msa0216150:CDS 50.0%
AGCCGTTGAAGGTTAGGGTT+CGG + chr2_1:61856448-61856467 Msa0216150:intron 50.0%
!! ATGCGGGAGCTTTATTGCAC+CGG + chr2_1:61856695-61856714 Msa0216150:intron 50.0%
GATACACTAAAAGGGCAGCC+CGG - chr2_1:61856717-61856736 None:intergenic 50.0%
TGTTTCGGATTATGGGCCTG+GGG - chr2_1:61856839-61856858 None:intergenic 50.0%
GTGTTTCGGATTATGGGCCT+GGG - chr2_1:61856840-61856859 None:intergenic 50.0%
TGTGTTTCGGATTATGGGCC+TGG - chr2_1:61856841-61856860 None:intergenic 50.0%
TTCAAGGGGGAGAAAGTGGT+GGG - chr2_1:61856905-61856924 None:intergenic 50.0%
TTTCAAGGGGGAGAAAGTGG+TGG - chr2_1:61856906-61856925 None:intergenic 50.0%
GGAAATAGAAAGGGGGTGAG+GGG - chr2_1:61856937-61856956 None:intergenic 50.0%
GGGAAATAGAAAGGGGGTGA+GGG - chr2_1:61856938-61856957 None:intergenic 50.0%
AGGGAAATAGAAAGGGGGTG+AGG - chr2_1:61856939-61856958 None:intergenic 50.0%
CCCCTTTCTATTTCCCTCCT+AGG + chr2_1:61856942-61856961 Msa0216150:intron 50.0%
TTTCCCTCCTAGGATGAGAC+TGG + chr2_1:61856952-61856971 Msa0216150:intron 50.0%
ACTCCAGTCTCATCCTAGGA+GGG - chr2_1:61856958-61856977 None:intergenic 50.0%
TACTCCAGTCTCATCCTAGG+AGG - chr2_1:61856959-61856978 None:intergenic 50.0%
TGCTACTCCAGTCTCATCCT+AGG - chr2_1:61856962-61856981 None:intergenic 50.0%
TAGGATGAGACTGGAGTAGC+AGG + chr2_1:61856961-61856980 Msa0216150:intron 50.0%
AGGATGAGACTGGAGTAGCA+GGG + chr2_1:61856962-61856981 Msa0216150:intron 50.0%
ACTCCATGAGGCTCCATGAT+AGG - chr2_1:61857073-61857092 None:intergenic 50.0%
! CACAAGAGGTTGTTTCCAGG+AGG + chr2_1:61857202-61857221 Msa0216150:intron 50.0%
AGTGCAATGTAGACTCCTCC+TGG - chr2_1:61857220-61857239 None:intergenic 50.0%
! CAACACCTCGTGAAAGGCAT+TGG - chr2_1:61857336-61857355 None:intergenic 50.0%
GCGGGTACAAATTCACCTGA+CGG - chr2_1:61857362-61857381 None:intergenic 50.0%
CAGTGTCACCAAGACACTTC+TGG + chr2_1:61857552-61857571 Msa0216150:intron 50.0%
TCACCAAGACACTTCTGGGT+GGG + chr2_1:61857557-61857576 Msa0216150:intron 50.0%
CGGTCCAATACCATCTTCAG+AGG + chr2_1:61858244-61858263 Msa0216150:intron 50.0%
! CTCCCCTCTGAAGATGGTAT+TGG - chr2_1:61858251-61858270 None:intergenic 50.0%
! CTGGTTCTTGTTTCTTCGGC+TGG - chr2_1:61858740-61858759 None:intergenic 50.0%
CTGTGACCTCAAGGTCACAT+TGG - chr2_1:61858879-61858898 None:intergenic 50.0%
ATGGGATGAATCATGCGGCA+GGG - chr2_1:61859276-61859295 None:intergenic 50.0%
TATGGGATGAATCATGCGGC+AGG - chr2_1:61859277-61859296 None:intergenic 50.0%
CCATACCGAGTAGCAACTGA+AGG - chr2_1:61859366-61859385 None:intergenic 50.0%
CCTTCAGTTGCTACTCGGTA+TGG + chr2_1:61859363-61859382 Msa0216150:CDS 50.0%
CAGACAAAGAAGGCTTCAGC+TGG + chr2_1:61859503-61859522 Msa0216150:three_prime_UTR 50.0%
GAGCGAGTGAGAGAGACTAG+CGG - chr2_1:61856201-61856220 None:intergenic 55.0%
GCCGCGTTTCCTCAATACAC+CGG + chr2_1:61856323-61856342 Msa0216150:CDS 55.0%
GCCGGTGTATTGAGGAAACG+CGG - chr2_1:61856327-61856346 None:intergenic 55.0%
AGCTTGAGGCCGGTGTATTG+AGG - chr2_1:61856335-61856354 None:intergenic 55.0%
CGACGAACAACATTCGAGGC+GGG - chr2_1:61856392-61856411 None:intergenic 55.0%
GCGACGAACAACATTCGAGG+CGG - chr2_1:61856393-61856412 None:intergenic 55.0%
GCCTCGAATGTTGTTCGTCG+CGG + chr2_1:61856392-61856411 Msa0216150:CDS 55.0%
ACCGCGACGAACAACATTCG+AGG - chr2_1:61856396-61856415 None:intergenic 55.0%
TCGAATGTTGTTCGTCGCGG+TGG + chr2_1:61856395-61856414 Msa0216150:CDS 55.0%
ATCACGAGCCTCACACACGA+CGG - chr2_1:61856423-61856442 None:intergenic 55.0%
CATACGTAGGGTCCGGAAAG+GGG - chr2_1:61856678-61856697 None:intergenic 55.0%
GCATACGTAGGGTCCGGAAA+GGG - chr2_1:61856679-61856698 None:intergenic 55.0%
CTTTCCGGACCCTACGTATG+CGG + chr2_1:61856678-61856697 Msa0216150:intron 55.0%
TTTCCGGACCCTACGTATGC+GGG + chr2_1:61856679-61856698 Msa0216150:intron 55.0%
!! TGCGGGAGCTTTATTGCACC+GGG + chr2_1:61856696-61856715 Msa0216150:intron 55.0%
CTGACGGGAATACCCAGCTA+AGG + chr2_1:61856805-61856824 Msa0216150:intron 55.0%
GGGGCCATTTCACCTTAGCT+GGG - chr2_1:61856820-61856839 None:intergenic 55.0%
TGGGGCCATTTCACCTTAGC+TGG - chr2_1:61856821-61856840 None:intergenic 55.0%
AGCTAAGGTGAAATGGCCCC+AGG + chr2_1:61856820-61856839 Msa0216150:intron 55.0%
ACTAGAGCTCCCGCATATGC+AGG + chr2_1:61857124-61857143 Msa0216150:intron 55.0%
CTAGAGCTCCCGCATATGCA+GGG + chr2_1:61857125-61857144 Msa0216150:intron 55.0%
!! GTGAAAGGCATTGGTCCACG+TGG - chr2_1:61857327-61857346 None:intergenic 55.0%
GTGGACCAATGCCTTTCACG+AGG + chr2_1:61857328-61857347 Msa0216150:intron 55.0%
CGGTGACAACACCTCGTGAA+AGG - chr2_1:61857342-61857361 None:intergenic 55.0%
GTCACCAAGACACTTCTGGG+TGG + chr2_1:61857556-61857575 Msa0216150:intron 55.0%
!! GAACCCACCCAGAAGTGTCT+TGG - chr2_1:61857563-61857582 None:intergenic 55.0%
! AAGGAGCTCCCCTCTGAAGA+TGG - chr2_1:61858257-61858276 None:intergenic 55.0%
AGGGGAGCTCCTTGTCTTCT+CGG + chr2_1:61858264-61858283 Msa0216150:intron 55.0%
AGCTCCTTGTCTTCTCGGGA+AGG + chr2_1:61858269-61858288 Msa0216150:intron 55.0%
GCTCCTTGTCTTCTCGGGAA+GGG + chr2_1:61858270-61858289 Msa0216150:intron 55.0%
CTACCCTTCCCGAGAAGACA+AGG - chr2_1:61858276-61858295 None:intergenic 55.0%
GACTGCAACTGATGGGAGCT+TGG + chr2_1:61858961-61858980 Msa0216150:intron 55.0%
GCCCAGAATTCGACCAACAC+AGG - chr2_1:61859240-61859259 None:intergenic 55.0%
TGGTCGAATTCTGGGCTCCA+TGG + chr2_1:61859244-61859263 Msa0216150:CDS 55.0%
GAATTCTGGGCTCCATGGTG+TGG + chr2_1:61859249-61859268 Msa0216150:CDS 55.0%
CTCAGGCGAGAAGCGACGAT+TGG - chr2_1:61856299-61856318 None:intergenic 60.0%
GACTTGTCGGAGCTTGAGGC+CGG - chr2_1:61856345-61856364 None:intergenic 60.0%
CGGAGACTTGTCGGAGCTTG+AGG - chr2_1:61856349-61856368 None:intergenic 60.0%
! GACGAGTGGCGGAGACTTGT+CGG - chr2_1:61856358-61856377 None:intergenic 60.0%
AAGTCTCCGCCACTCGTCTG+CGG + chr2_1:61856360-61856379 Msa0216150:CDS 60.0%
TTGACTCCGCAGACGAGTGG+CGG - chr2_1:61856369-61856388 None:intergenic 60.0%
CGCATACGTAGGGTCCGGAA+AGG - chr2_1:61856680-61856699 None:intergenic 60.0%
GAGACTGGAGTAGCAGGGCA+CGG + chr2_1:61856967-61856986 Msa0216150:intron 60.0%
AGACTGGAGTAGCAGGGCAC+GGG + chr2_1:61856968-61856987 Msa0216150:intron 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG - chr2_1:61857120-61857139 None:intergenic 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr2_1:61857136-61857155 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr2_1:61857137-61857156 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr2_1:61857136-61857155 Msa0216150:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr2_1:61857137-61857156 Msa0216150:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr2_1:61857152-61857171 None:intergenic 60.0%
!! CACGAGGTGTTGTCACCGTC+AGG + chr2_1:61857344-61857363 Msa0216150:intron 60.0%
AAGTCATGCAGTGGCCACGC+GGG - chr2_1:61857399-61857418 None:intergenic 60.0%
GAAGTCATGCAGTGGCCACG+CGG - chr2_1:61857400-61857419 None:intergenic 60.0%
GGGGAGCTCCTTGTCTTCTC+GGG + chr2_1:61858265-61858284 Msa0216150:intron 60.0%
GAGGAAACGCGGCAGTGCTC+AGG - chr2_1:61856316-61856335 None:intergenic 65.0%
! GGGTTGACTCCGCAGACGAG+TGG - chr2_1:61856372-61856391 None:intergenic 65.0%
CGGTGGAACCGTCGTGTGTG+AGG + chr2_1:61856412-61856431 Msa0216150:CDS 65.0%
GCTCCCGCATACGTAGGGTC+CGG - chr2_1:61856685-61856704 None:intergenic 65.0%
! TGCGGGAGCTCTAGTGCACC+GGG - chr2_1:61857119-61857138 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG + chr2_1:61857130-61857149 Msa0216150:intron 65.0%
CTCCCGCATATGCAGGGTCC+GGG + chr2_1:61857131-61857150 Msa0216150:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr2_1:61857135-61857154 Msa0216150:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr2_1:61857150-61857169 Msa0216150:intron 65.0%
ATGCGGCAGGGACCACACCA+TGG - chr2_1:61859264-61859283 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 61856099 61859740 61856099 ID=Msa0216150;Name=Msa0216150
chr2_1 mRNA 61856099 61859740 61856099 ID=Msa0216150-mRNA-1;Parent=Msa0216150;Name=Msa0216150-mRNA-1;_AED=0.00;_eAED=0.00;_QI=155|1|1|1|1|1|2|243|172
chr2_1 exon 61856099 61856458 61856099 ID=Msa0216150-mRNA-1:exon:17072;Parent=Msa0216150-mRNA-1
chr2_1 exon 61859184 61859740 61859184 ID=Msa0216150-mRNA-1:exon:17073;Parent=Msa0216150-mRNA-1
chr2_1 five_prime_UTR 61856099 61856253 61856099 ID=Msa0216150-mRNA-1:five_prime_utr;Parent=Msa0216150-mRNA-1
chr2_1 CDS 61856254 61856458 61856254 ID=Msa0216150-mRNA-1:cds;Parent=Msa0216150-mRNA-1
chr2_1 CDS 61859184 61859497 61859184 ID=Msa0216150-mRNA-1:cds;Parent=Msa0216150-mRNA-1
chr2_1 three_prime_UTR 61859498 61859740 61859498 ID=Msa0216150-mRNA-1:three_prime_utr;Parent=Msa0216150-mRNA-1
Gene Sequence

>Msa0216150

ATGGCTACCGTACAACTCGAATCCTTCTCCCTTATTCGCTCTCCAATCGTCGCTTCTCGCCTGAGCACTGCCGCGTTTCCTCAATACACCGGCCTCAAGCTCCGACAAGTCTCCGCCACTCGTCTGCGGAGTCAACCCGCCTCGAATGTTGTTCGTCGCGGTGGAACCGTCGTGTGTGAGGCTCGTGATAACACAGCCGTTGAAGTGGCTTCTATTACTGATGGAAATTGGCAATCCCTTGTCATAGAATCTGAGATTCCTGTGTTGGTCGAATTCTGGGCTCCATGGTGTGGTCCCTGCCGCATGATTCATCCCATAGTTGATGAGCTAGCAAAGGAATATGCGGGTAAGCTCAAGTGTTACAAACTCAATACTGATGAAAGTCCTTCAGTTGCTACTCGGTATGGGATTCGAAGTATTCCAACTGTCATTTTCTTCAAGAACGGTGAAAAGAAAGATACAGTTATTGGTGCTGTGCCCAAAGCAACATTGACCACAAATATAGAAAAATTCCTGTGA

Protein sequence

>Msa0216150

MATVQLESFSLIRSPIVASRLSTAAFPQYTGLKLRQVSATRLRSQPASNVVRRGGTVVCEARDNTAVEVASITDGNWQSLVIESEIPVLVEFWAPWCGPCRMIHPIVDELAKEYAGKLKCYKLNTDESPSVATRYGIRSIPTVIFFKNGEKKDTVIGAVPKATLTTNIEKFL*