AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0726170


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0726170 MtrunA17_Chr5g0418031 95.522 268 9 2 1 268 1 265 0.0 517
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0726170 AT1G13990.1 59.862 289 79 5 1 266 1 275 7.49e-100 293
Msa0726170 AT1G13990.2 54.259 317 80 6 1 266 1 303 1.32e-92 276
Msa0726170 AT1G13990.3 49.062 320 95 9 1 266 1 306 4.00e-70 218

Find 103 sgRNAs with CRISPR-Local

Find 532 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTAGTTTGGAAATGGAAAT+TGG 0.174634 5_1:+26667297 None:intergenic
TTTGTTCCCTTTGGCTGTTT+TGG 0.249654 5_1:+26663398 None:intergenic
CAGATTAAGCTTAAGGCTTT+CGG 0.274485 5_1:+26663521 None:intergenic
AAGAGAAGTTAGTTTGGAAA+TGG 0.319072 5_1:+26667290 None:intergenic
AAGAACTCATCCGAGTTTCC+AGG 0.333604 5_1:+26666997 None:intergenic
AGATTAAGCTTAAGGCTTTC+GGG 0.343222 5_1:+26663522 None:intergenic
TGGAAGAAGAGAAGTTAGTT+TGG 0.348657 5_1:+26667284 None:intergenic
GTGGCGACGGAAAGGGTTGG+TGG 0.357740 5_1:+26667203 None:intergenic
CCTTTCTCCTCCTCCTTGTT+CGG 0.360594 5_1:+26667118 None:intergenic
GTCGTCGGCGGCGGCGGCAG+AGG 0.365376 5_1:-26667081 Msa0726170:CDS
AAATTTGAAGTGTGCTAGAT+AGG 0.365672 5_1:-26663270 Msa0726170:three_prime_UTR
GAGCTCGCAGATTAAGCTTA+AGG 0.373495 5_1:+26663514 None:intergenic
TGCAACGTCGTCGGCGGCGG+CGG 0.376584 5_1:-26667087 Msa0726170:CDS
TGCTAGATAGGGTGAATTCT+AGG 0.380645 5_1:-26663258 Msa0726170:three_prime_UTR
AATCACACCTTATATTTCTC+CGG 0.387380 5_1:+26664383 None:intergenic
TTAGTTTGGAAATGGAAATT+GGG 0.394216 5_1:+26667298 None:intergenic
TGAAAACCCGGAGAAATATA+AGG 0.401206 5_1:-26664390 Msa0726170:intron
AGAGAGAGAGGCGGCGGGTG+TGG 0.404308 5_1:+26667184 None:intergenic
AGCTTAAGGCTTTCGGGTAC+AGG 0.405348 5_1:+26663528 None:intergenic
TCAGATCATCTTGATCTTCA+AGG 0.424973 5_1:+26663481 None:intergenic
CTAATATCTTCTACTTGCAT+TGG 0.426258 5_1:+26664188 None:intergenic
CGACGGAAAGGGTTGGTGGG+AGG 0.428198 5_1:+26667207 None:intergenic
TTGATCTTTGCAAGAAAATG+AGG 0.433526 5_1:-26663587 Msa0726170:CDS
CGGCGGGTGTGGCGACGGAA+AGG 0.455266 5_1:+26667195 None:intergenic
TACCGATGAGGCGTCTATCT+CGG 0.460916 5_1:+26663698 None:intergenic
TCGTGCAACGTCGTCGGCGG+CGG 0.462296 5_1:-26667090 Msa0726170:CDS
GGCTTTGAAGTTTCTCTCCA+AGG 0.462303 5_1:+26664454 None:intergenic
TTAATCTGCGAGCTCGAAAA+CGG 0.468199 5_1:-26663506 Msa0726170:CDS
GACGGAAAGGGTTGGTGGGA+GGG 0.471223 5_1:+26667208 None:intergenic
GGCGGGTGTGGCGACGGAAA+GGG 0.478572 5_1:+26667196 None:intergenic
TTTGATTCTAGCAGCTATGA+TGG 0.481586 5_1:-26666922 Msa0726170:intron
CAAGTAGAAGATATTAGAGA+TGG 0.493706 5_1:-26664182 Msa0726170:CDS
GAGAGAAGAGAGAGAGGCGG+CGG 0.497194 5_1:+26667178 None:intergenic
AGAGGCGGCGGGTGTGGCGA+CGG 0.499779 5_1:+26667190 None:intergenic
CAGTGGAAACGAGGAGGAGG+TGG 0.500190 5_1:-26667049 Msa0726170:CDS
GAGGTGTAGAGATGAGTCTC+GGG 0.508797 5_1:+26667145 None:intergenic
GTCGGCGGCGGCGGCAGAGG+AGG 0.511472 5_1:-26667078 Msa0726170:CDS
AGCGAAGTTGAAAGAGAGCT+TGG 0.516832 5_1:-26664290 Msa0726170:CDS
GCTTTGAAGTTTCTCTCCAA+GGG 0.519722 5_1:+26664455 None:intergenic
AAATCAGTCTAAACAAGCAA+GGG 0.520422 5_1:-26664225 Msa0726170:CDS
GAAATTCAACTCCCTTGTGA+TGG 0.520817 5_1:-26663455 Msa0726170:three_prime_UTR
GTTGGTGGGAGGGAGAGCGA+TGG 0.522907 5_1:+26667218 None:intergenic
AGAGAAGAGAGAGAGGCGGC+GGG 0.526807 5_1:+26667179 None:intergenic
AGATATTAGAGATGGAGTGC+TGG 0.526832 5_1:-26664174 Msa0726170:intron
CTCCTCCTTGTTCGGAAGTG+AGG 0.531784 5_1:+26667126 None:intergenic
CCGAACAAGGAGGAGGAGAA+AGG 0.536819 5_1:-26667118 Msa0726170:CDS
ATCACACCTTATATTTCTCC+GGG 0.540391 5_1:+26664384 None:intergenic
TGTGTATGTACTCACCCAAA+AGG 0.546154 5_1:-26664431 Msa0726170:CDS
TGATCTTTGCAAGAAAATGA+GGG 0.547590 5_1:-26663586 Msa0726170:CDS
GAAGTATCGTGCAACGTCGT+CGG 0.549545 5_1:-26667096 Msa0726170:CDS
CTACACCTCACTTCCGAACA+AGG 0.552595 5_1:-26667131 Msa0726170:CDS
ATCATAGCTGCTAGAATCAA+AGG 0.555592 5_1:+26666924 None:intergenic
GTGGGAGGGAGAGCGATGGA+AGG 0.556169 5_1:+26667222 None:intergenic
AAATTCAACTCCCTTGTGAT+GGG 0.557810 5_1:-26663454 Msa0726170:three_prime_UTR
TGACAGTGGAAACGAGGAGG+AGG 0.559489 5_1:-26667052 Msa0726170:CDS
AAAATCAGTCTAAACAAGCA+AGG 0.561023 5_1:-26664226 Msa0726170:CDS
GAGAAAGCGCTTCACATGGA+TGG 0.561227 5_1:-26667027 Msa0726170:CDS
CAGATCATCTTGATCTTCAA+GGG 0.562330 5_1:+26663482 None:intergenic
CAGTTCTATTCCGCCGAGGT+AGG 0.562349 5_1:-26663557 Msa0726170:CDS
CTTGCTGCAAGGAGGGTGTG+AGG 0.562675 5_1:-26663727 Msa0726170:CDS
TCCACACTTCACATCAACCA+TGG 0.563558 5_1:-26667265 Msa0726170:exon
TGAGGTGTAGAGATGAGTCT+CGG 0.563676 5_1:+26667144 None:intergenic
CGATGGAAGGTGAAACTGAA+GGG 0.566266 5_1:+26667235 None:intergenic
TTGCTGCAAGGAGGGTGTGA+GGG 0.569430 5_1:-26663726 Msa0726170:CDS
TGGCGACGGAAAGGGTTGGT+GGG 0.569624 5_1:+26667204 None:intergenic
GTCGCTTCTTTCCCATCACA+AGG 0.572178 5_1:+26663443 None:intergenic
AATTTGAAGTGTGCTAGATA+GGG 0.572186 5_1:-26663269 Msa0726170:three_prime_UTR
CTTGGTTATTTGTACCGATG+AGG 0.573244 5_1:+26663686 None:intergenic
TGCCGAGATAGACGCCTCAT+CGG 0.575782 5_1:-26663700 Msa0726170:intron
CCGACGCATGTCATAAGCAC+GGG 0.578794 5_1:+26666960 None:intergenic
AACTGAAGGGAGAGAATCCA+TGG 0.580578 5_1:+26667248 None:intergenic
GATGGCGAGAGAAGAGAGAG+AGG 0.586258 5_1:+26667172 None:intergenic
AGTCTAAACAAGCAAGGGGA+GGG 0.591602 5_1:-26664220 Msa0726170:CDS
CTCACTTCCGAACAAGGAGG+AGG 0.592127 5_1:-26667125 Msa0726170:CDS
TAACACCCAAAACAGCCAAA+GGG 0.603277 5_1:-26663404 Msa0726170:three_prime_UTR
GTACAGGAGGTGTCCTACCT+CGG 0.604704 5_1:+26663544 None:intergenic
CAGTCTAAACAAGCAAGGGG+AGG 0.606675 5_1:-26664221 Msa0726170:CDS
AGGAGATGACAGTGGAAACG+AGG 0.607798 5_1:-26667058 Msa0726170:CDS
AATTGTGCACGATGAAAACC+CGG 0.610498 5_1:-26664402 Msa0726170:CDS
GGTGGAGAAAGCGCTTCACA+TGG 0.611542 5_1:-26667031 Msa0726170:CDS
GTATCGTGCAACGTCGTCGG+CGG 0.612057 5_1:-26667093 Msa0726170:CDS
GTAACACCCAAAACAGCCAA+AGG 0.614205 5_1:-26663405 Msa0726170:three_prime_UTR
GGTGTGGCGACGGAAAGGGT+TGG 0.615753 5_1:+26667200 None:intergenic
TTAAGGCTTTCGGGTACAGG+AGG 0.618037 5_1:+26663531 None:intergenic
AAGTATTGTGACTTGCTGCA+AGG 0.620712 5_1:-26663738 Msa0726170:CDS
CCCGTGCTTATGACATGCGT+CGG 0.623625 5_1:-26666960 Msa0726170:CDS
TCCATGGTTGATGTGAAGTG+TGG 0.626748 5_1:+26667264 None:intergenic
GGCGAGAGAAGAGAGAGAGG+CGG 0.633721 5_1:+26667175 None:intergenic
TCCGACGCATGTCATAAGCA+CGG 0.634960 5_1:+26666959 None:intergenic
GCGATGGAAGGTGAAACTGA+AGG 0.640575 5_1:+26667234 None:intergenic
ATTGTGACTTGCTGCAAGGA+GGG 0.645627 5_1:-26663734 Msa0726170:CDS
ACGCATGTCATAAGCACGGG+AGG 0.659438 5_1:+26666963 None:intergenic
AGATGACAGTGGAAACGAGG+AGG 0.659545 5_1:-26667055 Msa0726170:CDS
CTTGCAGTTCTATTCCGCCG+AGG 0.660240 5_1:-26663561 Msa0726170:CDS
AATCAGTCTAAACAAGCAAG+GGG 0.668776 5_1:-26664224 Msa0726170:CDS
AGGTGTAGAGATGAGTCTCG+GGG 0.671225 5_1:+26667146 None:intergenic
TCGCTTCTTTCCCATCACAA+GGG 0.698146 5_1:+26663444 None:intergenic
CAGGAGGTGTCCTACCTCGG+CGG 0.706198 5_1:+26663547 None:intergenic
TATTGTGACTTGCTGCAAGG+AGG 0.715644 5_1:-26663735 Msa0726170:CDS
CACCTCACTTCCGAACAAGG+AGG 0.734423 5_1:-26667128 Msa0726170:CDS
GGCAGAGGAGGAGATGACAG+TGG 0.737489 5_1:-26667066 Msa0726170:CDS
GGTATTTGAAGATGAAAACG+AGG 0.756977 5_1:-26663766 Msa0726170:CDS
GGTGTAGAGATGAGTCTCGG+GGG 0.766311 5_1:+26667147 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAATTTTTTGTTTTCA+TGG - chr5_1:26663707-26663726 Msa0726170:CDS 10.0%
!!! TTAAGCTATTTTTATAAAAA+AGG + chr5_1:26663968-26663987 None:intergenic 10.0%
!!! ATAAATTTAGAATGAAATTT+AGG + chr5_1:26664153-26664172 None:intergenic 10.0%
!! ATTATATTATGTTTAGATAT+TGG - chr5_1:26665840-26665859 Msa0726170:intron 10.0%
!! AATTTAATCATTTAACAATT+TGG - chr5_1:26666763-26666782 Msa0726170:intron 10.0%
!!! AATTTAATTTTTTGTTTTCA+TGG - chr5_1:26663707-26663726 Msa0726170:CDS 10.0%
!!! TTAAGCTATTTTTATAAAAA+AGG + chr5_1:26663968-26663987 None:intergenic 10.0%
!!! ATAAATTTAGAATGAAATTT+AGG + chr5_1:26664153-26664172 None:intergenic 10.0%
!! ATTATATTATGTTTAGATAT+TGG - chr5_1:26665840-26665859 Msa0726170:intron 10.0%
!! AATTTAATCATTTAACAATT+TGG - chr5_1:26666763-26666782 Msa0726170:intron 10.0%
!!! TATTGTATTCTGTTTTATTT+TGG - chr5_1:26665356-26665375 Msa0726170:intron 15.0%
!! ATAATAACAACTAAGTAATA+TGG + chr5_1:26665662-26665681 None:intergenic 15.0%
!! TATTATTTACCTGTTTATTT+AGG - chr5_1:26665691-26665710 Msa0726170:intron 15.0%
!! ATTATTTACCTGTTTATTTA+GGG - chr5_1:26665692-26665711 Msa0726170:intron 15.0%
!!! TATTGTATTCTGTTTTATTT+TGG - chr5_1:26665356-26665375 Msa0726170:intron 15.0%
!! ATAATAACAACTAAGTAATA+TGG + chr5_1:26665662-26665681 None:intergenic 15.0%
!! TATTATTTACCTGTTTATTT+AGG - chr5_1:26665691-26665710 Msa0726170:intron 15.0%
!! ATTATTTACCTGTTTATTTA+GGG - chr5_1:26665692-26665711 Msa0726170:intron 15.0%
!!! ATTTAAAGTCAAATTGCTTA+TGG - chr5_1:26663759-26663778 Msa0726170:CDS 20.0%
!! TATTTGGATTGAATTATTTG+AGG - chr5_1:26663790-26663809 Msa0726170:intron 20.0%
!! CTAGAAAACTTATGTAAATA+AGG + chr5_1:26663889-26663908 None:intergenic 20.0%
!!! CTTATTTACATAAGTTTTCT+AGG - chr5_1:26663887-26663906 Msa0726170:intron 20.0%
!! AAAAGAATAAAGAAAGGAAT+TGG - chr5_1:26664307-26664326 Msa0726170:intron 20.0%
!! AGTAACTATATACTACAAAT+AGG + chr5_1:26664401-26664420 None:intergenic 20.0%
!! ATATCGTTTGTGAATAAATT+CGG - chr5_1:26664776-26664795 Msa0726170:intron 20.0%
!!! TTTAAAATTATCAAGTAGTG+AGG + chr5_1:26665223-26665242 None:intergenic 20.0%
!! AGCAATAAATTAAACTAAGA+TGG + chr5_1:26665439-26665458 None:intergenic 20.0%
!!! TTGTTACTTGTAATAATTGA+AGG - chr5_1:26665996-26666015 Msa0726170:intron 20.0%
!! AAAAACAATAAACTGACAAA+AGG + chr5_1:26666026-26666045 None:intergenic 20.0%
!! TAGGAAAAAAAACAGAAAAA+AGG + chr5_1:26666210-26666229 None:intergenic 20.0%
!!! CTATCAATATTTGAAATCTT+CGG - chr5_1:26666227-26666246 Msa0726170:intron 20.0%
!! ATTTCACATTACAAAATGTT+TGG + chr5_1:26666484-26666503 None:intergenic 20.0%
!!! AATATATCAGAAAGTATCAA+AGG - chr5_1:26666501-26666520 Msa0726170:intron 20.0%
!!! ATTTAAAGTCAAATTGCTTA+TGG - chr5_1:26663759-26663778 Msa0726170:CDS 20.0%
!! TATTTGGATTGAATTATTTG+AGG - chr5_1:26663790-26663809 Msa0726170:intron 20.0%
!! CTAGAAAACTTATGTAAATA+AGG + chr5_1:26663889-26663908 None:intergenic 20.0%
!!! CTTATTTACATAAGTTTTCT+AGG - chr5_1:26663887-26663906 Msa0726170:intron 20.0%
!! AAAAGAATAAAGAAAGGAAT+TGG - chr5_1:26664307-26664326 Msa0726170:intron 20.0%
!! AGTAACTATATACTACAAAT+AGG + chr5_1:26664401-26664420 None:intergenic 20.0%
!! ATATCGTTTGTGAATAAATT+CGG - chr5_1:26664776-26664795 Msa0726170:intron 20.0%
!!! TTTAAAATTATCAAGTAGTG+AGG + chr5_1:26665223-26665242 None:intergenic 20.0%
!! AGCAATAAATTAAACTAAGA+TGG + chr5_1:26665439-26665458 None:intergenic 20.0%
!!! TTGTTACTTGTAATAATTGA+AGG - chr5_1:26665996-26666015 Msa0726170:intron 20.0%
!! AAAAACAATAAACTGACAAA+AGG + chr5_1:26666026-26666045 None:intergenic 20.0%
!! TAGGAAAAAAAACAGAAAAA+AGG + chr5_1:26666210-26666229 None:intergenic 20.0%
!!! CTATCAATATTTGAAATCTT+CGG - chr5_1:26666227-26666246 Msa0726170:intron 20.0%
!! ATTTCACATTACAAAATGTT+TGG + chr5_1:26666484-26666503 None:intergenic 20.0%
!!! AATATATCAGAAAGTATCAA+AGG - chr5_1:26666501-26666520 Msa0726170:intron 20.0%
!! TTAGTTTGGAAATGGAAATT+GGG + chr5_1:26663270-26663289 None:intergenic 25.0%
! GATCTTCATGATTTAGATTA+AGG - chr5_1:26663731-26663750 Msa0726170:CDS 25.0%
! AATAAGGTGAAATCTATTGA+TGG + chr5_1:26663873-26663892 None:intergenic 25.0%
!! AAATTTAGGTTAAGTTGCTT+GGG + chr5_1:26664139-26664158 None:intergenic 25.0%
! AGAGTGAAAAGAATAAAGAA+AGG - chr5_1:26664301-26664320 Msa0726170:intron 25.0%
! ATATCCTTGGTTTACAAAAA+AGG - chr5_1:26664545-26664564 Msa0726170:intron 25.0%
! TTTGGAGATTATTGTTAGAA+AGG + chr5_1:26664619-26664638 None:intergenic 25.0%
! TTGTAAAACTGAGTTAATTG+AGG - chr5_1:26664688-26664707 Msa0726170:intron 25.0%
! GAATTTATTCACAAACGATA+TGG + chr5_1:26664777-26664796 None:intergenic 25.0%
! CATAATAAGATCAAATTCGA+TGG + chr5_1:26665267-26665286 None:intergenic 25.0%
!!! TATTCTGTTTTATTTTGGCT+GGG - chr5_1:26665361-26665380 Msa0726170:intron 25.0%
! CGAAGATTTCAAATATTGAT+AGG + chr5_1:26666229-26666248 None:intergenic 25.0%
! ATTATGTTCAAACACATTAG+AGG + chr5_1:26666540-26666559 None:intergenic 25.0%
! CTAATGTGTTTGAACATAAT+TGG - chr5_1:26666540-26666559 Msa0726170:intron 25.0%
! TAATTGGAATTTGATTGCTT+TGG - chr5_1:26666556-26666575 Msa0726170:intron 25.0%
! TATACTAAGGAAAACTAATC+GGG + chr5_1:26666615-26666634 None:intergenic 25.0%
! GTATACTAAGGAAAACTAAT+CGG + chr5_1:26666616-26666635 None:intergenic 25.0%
!! AATCATTGTTTCATTTTACC+AGG + chr5_1:26666687-26666706 None:intergenic 25.0%
! ATTTAACAATTTGGCAATGT+TGG - chr5_1:26666772-26666791 Msa0726170:intron 25.0%
!! TTAGTTTGGAAATGGAAATT+GGG + chr5_1:26663270-26663289 None:intergenic 25.0%
! GATCTTCATGATTTAGATTA+AGG - chr5_1:26663731-26663750 Msa0726170:CDS 25.0%
! AATAAGGTGAAATCTATTGA+TGG + chr5_1:26663873-26663892 None:intergenic 25.0%
!! AAATTTAGGTTAAGTTGCTT+GGG + chr5_1:26664139-26664158 None:intergenic 25.0%
! AGAGTGAAAAGAATAAAGAA+AGG - chr5_1:26664301-26664320 Msa0726170:intron 25.0%
! ATATCCTTGGTTTACAAAAA+AGG - chr5_1:26664545-26664564 Msa0726170:intron 25.0%
! TTTGGAGATTATTGTTAGAA+AGG + chr5_1:26664619-26664638 None:intergenic 25.0%
! TTGTAAAACTGAGTTAATTG+AGG - chr5_1:26664688-26664707 Msa0726170:intron 25.0%
! GAATTTATTCACAAACGATA+TGG + chr5_1:26664777-26664796 None:intergenic 25.0%
! CATAATAAGATCAAATTCGA+TGG + chr5_1:26665267-26665286 None:intergenic 25.0%
!!! TATTCTGTTTTATTTTGGCT+GGG - chr5_1:26665361-26665380 Msa0726170:intron 25.0%
! CGAAGATTTCAAATATTGAT+AGG + chr5_1:26666229-26666248 None:intergenic 25.0%
! ATTATGTTCAAACACATTAG+AGG + chr5_1:26666540-26666559 None:intergenic 25.0%
! CTAATGTGTTTGAACATAAT+TGG - chr5_1:26666540-26666559 Msa0726170:intron 25.0%
! TAATTGGAATTTGATTGCTT+TGG - chr5_1:26666556-26666575 Msa0726170:intron 25.0%
! TATACTAAGGAAAACTAATC+GGG + chr5_1:26666615-26666634 None:intergenic 25.0%
! GTATACTAAGGAAAACTAAT+CGG + chr5_1:26666616-26666635 None:intergenic 25.0%
!! AATCATTGTTTCATTTTACC+AGG + chr5_1:26666687-26666706 None:intergenic 25.0%
! ATTTAACAATTTGGCAATGT+TGG - chr5_1:26666772-26666791 Msa0726170:intron 25.0%
! GTTAGTTTGGAAATGGAAAT+TGG + chr5_1:26663271-26663290 None:intergenic 30.0%
! AAGAGAAGTTAGTTTGGAAA+TGG + chr5_1:26663278-26663297 None:intergenic 30.0%
AAGTCAAATTGCTTATGGTA+AGG - chr5_1:26663764-26663783 Msa0726170:CDS 30.0%
AGTCAAATTGCTTATGGTAA+GGG - chr5_1:26663765-26663784 Msa0726170:CDS 30.0%
! ACTATTTGCAACTGTTTTCA+GGG + chr5_1:26664065-26664084 None:intergenic 30.0%
! AACTATTTGCAACTGTTTTC+AGG + chr5_1:26664066-26664085 None:intergenic 30.0%
TGAAAACAGTTGCAAATAGT+TGG - chr5_1:26664065-26664084 Msa0726170:intron 30.0%
! GAAATTTAGGTTAAGTTGCT+TGG + chr5_1:26664140-26664159 None:intergenic 30.0%
ACCATCATACTCATTATTGT+TGG - chr5_1:26664209-26664228 Msa0726170:CDS 30.0%
ACCAACAATAATGAGTATGA+TGG + chr5_1:26664213-26664232 None:intergenic 30.0%
! ATAGGATTTTTCGTTGTAGA+GGG + chr5_1:26664383-26664402 None:intergenic 30.0%
! AATAGGATTTTTCGTTGTAG+AGG + chr5_1:26664384-26664403 None:intergenic 30.0%
TGTAGTATATAGTTACTGAG+CGG - chr5_1:26664404-26664423 Msa0726170:CDS 30.0%
GGATAAGAAAACTACTTCAA+TGG - chr5_1:26664435-26664454 Msa0726170:CDS 30.0%
CAACTTCTATCAAAAGACAT+CGG - chr5_1:26664467-26664486 Msa0726170:CDS 30.0%
!!! TACTCCTTTTTTGTAAACCA+AGG + chr5_1:26664552-26664571 None:intergenic 30.0%
TTACAAAAAAGGAGTAGAAC+AGG - chr5_1:26664556-26664575 Msa0726170:intron 30.0%
! CAAACAAAGCAAAGTTGTTT+TGG + chr5_1:26664637-26664656 None:intergenic 30.0%
GTGTTTCAAAATTCAAACTC+AGG - chr5_1:26664732-26664751 Msa0726170:intron 30.0%
TTGAGCGAGTCTAAATATAT+TGG - chr5_1:26664823-26664842 Msa0726170:intron 30.0%
!!! CTGTCATTTTATACATGTCT+AGG + chr5_1:26664857-26664876 None:intergenic 30.0%
AGACATGTATAAAATGACAG+CGG - chr5_1:26664857-26664876 Msa0726170:intron 30.0%
AAATTATCAAGTAGTGAGGA+TGG + chr5_1:26665219-26665238 None:intergenic 30.0%
TAACTCTCAAATCACATGAT+AGG + chr5_1:26665316-26665335 None:intergenic 30.0%
!!! GTATTCTGTTTTATTTTGGC+TGG - chr5_1:26665360-26665379 Msa0726170:intron 30.0%
GAGTATCTTAGTTTATCTCT+AGG - chr5_1:26665584-26665603 Msa0726170:intron 30.0%
GTAATATGGCAACTAATTCT+AGG + chr5_1:26665648-26665667 None:intergenic 30.0%
! TTACCTGTTTATTTAGGGTT+AGG - chr5_1:26665697-26665716 Msa0726170:intron 30.0%
! TACCTGTTTATTTAGGGTTA+GGG - chr5_1:26665698-26665717 Msa0726170:intron 30.0%
AACACTAGACCTTAATTACA+GGG + chr5_1:26665733-26665752 None:intergenic 30.0%
AAACACTAGACCTTAATTAC+AGG + chr5_1:26665734-26665753 None:intergenic 30.0%
! TGTCATCTAAAACTGATGAA+AGG + chr5_1:26666089-26666108 None:intergenic 30.0%
AATCACACCTTATATTTCTC+CGG + chr5_1:26666185-26666204 None:intergenic 30.0%
!! TGCTTCCTTTTGAAAACAAT+AGG + chr5_1:26666301-26666320 None:intergenic 30.0%
AAAATCAGTCTAAACAAGCA+AGG - chr5_1:26666339-26666358 Msa0726170:intron 30.0%
AAATCAGTCTAAACAAGCAA+GGG - chr5_1:26666340-26666359 Msa0726170:intron 30.0%
CTAATATCTTCTACTTGCAT+TGG + chr5_1:26666380-26666399 None:intergenic 30.0%
CAAGTAGAAGATATTAGAGA+TGG - chr5_1:26666383-26666402 Msa0726170:intron 30.0%
GAAGTTTATAAATTGCATCC+TGG + chr5_1:26666592-26666611 None:intergenic 30.0%
ATACTAAGGAAAACTAATCG+GGG + chr5_1:26666614-26666633 None:intergenic 30.0%
TTAGAGTAGTAGGTATACTA+AGG + chr5_1:26666628-26666647 None:intergenic 30.0%
! AACTTACAGTTTAGAGTAGT+AGG + chr5_1:26666638-26666657 None:intergenic 30.0%
! CTAAACTGTAAGTTTGTTCA+TGG - chr5_1:26666644-26666663 Msa0726170:intron 30.0%
GTATAAACCATGCAATATGT+TGG + chr5_1:26666717-26666736 None:intergenic 30.0%
ATAGTCAAAGTACAATTGCT+TGG + chr5_1:26666900-26666919 None:intergenic 30.0%
TTGATCTTTGCAAGAAAATG+AGG - chr5_1:26666978-26666997 Msa0726170:CDS 30.0%
TGATCTTTGCAAGAAAATGA+GGG - chr5_1:26666979-26666998 Msa0726170:CDS 30.0%
! ATACACATTTTTGTTCCCTT+TGG + chr5_1:26667179-26667198 None:intergenic 30.0%
! AAATTTGAAGTGTGCTAGAT+AGG - chr5_1:26667295-26667314 Msa0726170:five_prime_UTR 30.0%
! AATTTGAAGTGTGCTAGATA+GGG - chr5_1:26667296-26667315 Msa0726170:five_prime_UTR 30.0%
! GTTAGTTTGGAAATGGAAAT+TGG + chr5_1:26663271-26663290 None:intergenic 30.0%
! AAGAGAAGTTAGTTTGGAAA+TGG + chr5_1:26663278-26663297 None:intergenic 30.0%
AAGTCAAATTGCTTATGGTA+AGG - chr5_1:26663764-26663783 Msa0726170:CDS 30.0%
AGTCAAATTGCTTATGGTAA+GGG - chr5_1:26663765-26663784 Msa0726170:CDS 30.0%
! ACTATTTGCAACTGTTTTCA+GGG + chr5_1:26664065-26664084 None:intergenic 30.0%
! AACTATTTGCAACTGTTTTC+AGG + chr5_1:26664066-26664085 None:intergenic 30.0%
TGAAAACAGTTGCAAATAGT+TGG - chr5_1:26664065-26664084 Msa0726170:intron 30.0%
! GAAATTTAGGTTAAGTTGCT+TGG + chr5_1:26664140-26664159 None:intergenic 30.0%
ACCATCATACTCATTATTGT+TGG - chr5_1:26664209-26664228 Msa0726170:CDS 30.0%
ACCAACAATAATGAGTATGA+TGG + chr5_1:26664213-26664232 None:intergenic 30.0%
! ATAGGATTTTTCGTTGTAGA+GGG + chr5_1:26664383-26664402 None:intergenic 30.0%
! AATAGGATTTTTCGTTGTAG+AGG + chr5_1:26664384-26664403 None:intergenic 30.0%
TGTAGTATATAGTTACTGAG+CGG - chr5_1:26664404-26664423 Msa0726170:CDS 30.0%
GGATAAGAAAACTACTTCAA+TGG - chr5_1:26664435-26664454 Msa0726170:CDS 30.0%
CAACTTCTATCAAAAGACAT+CGG - chr5_1:26664467-26664486 Msa0726170:CDS 30.0%
!!! TACTCCTTTTTTGTAAACCA+AGG + chr5_1:26664552-26664571 None:intergenic 30.0%
TTACAAAAAAGGAGTAGAAC+AGG - chr5_1:26664556-26664575 Msa0726170:intron 30.0%
! CAAACAAAGCAAAGTTGTTT+TGG + chr5_1:26664637-26664656 None:intergenic 30.0%
GTGTTTCAAAATTCAAACTC+AGG - chr5_1:26664732-26664751 Msa0726170:intron 30.0%
TTGAGCGAGTCTAAATATAT+TGG - chr5_1:26664823-26664842 Msa0726170:intron 30.0%
!!! CTGTCATTTTATACATGTCT+AGG + chr5_1:26664857-26664876 None:intergenic 30.0%
AGACATGTATAAAATGACAG+CGG - chr5_1:26664857-26664876 Msa0726170:intron 30.0%
AAATTATCAAGTAGTGAGGA+TGG + chr5_1:26665219-26665238 None:intergenic 30.0%
TAACTCTCAAATCACATGAT+AGG + chr5_1:26665316-26665335 None:intergenic 30.0%
!!! GTATTCTGTTTTATTTTGGC+TGG - chr5_1:26665360-26665379 Msa0726170:intron 30.0%
GAGTATCTTAGTTTATCTCT+AGG - chr5_1:26665584-26665603 Msa0726170:intron 30.0%
GTAATATGGCAACTAATTCT+AGG + chr5_1:26665648-26665667 None:intergenic 30.0%
! TTACCTGTTTATTTAGGGTT+AGG - chr5_1:26665697-26665716 Msa0726170:intron 30.0%
! TACCTGTTTATTTAGGGTTA+GGG - chr5_1:26665698-26665717 Msa0726170:intron 30.0%
AACACTAGACCTTAATTACA+GGG + chr5_1:26665733-26665752 None:intergenic 30.0%
AAACACTAGACCTTAATTAC+AGG + chr5_1:26665734-26665753 None:intergenic 30.0%
! TGTCATCTAAAACTGATGAA+AGG + chr5_1:26666089-26666108 None:intergenic 30.0%
AATCACACCTTATATTTCTC+CGG + chr5_1:26666185-26666204 None:intergenic 30.0%
!! TGCTTCCTTTTGAAAACAAT+AGG + chr5_1:26666301-26666320 None:intergenic 30.0%
AAAATCAGTCTAAACAAGCA+AGG - chr5_1:26666339-26666358 Msa0726170:intron 30.0%
AAATCAGTCTAAACAAGCAA+GGG - chr5_1:26666340-26666359 Msa0726170:intron 30.0%
CTAATATCTTCTACTTGCAT+TGG + chr5_1:26666380-26666399 None:intergenic 30.0%
CAAGTAGAAGATATTAGAGA+TGG - chr5_1:26666383-26666402 Msa0726170:intron 30.0%
GAAGTTTATAAATTGCATCC+TGG + chr5_1:26666592-26666611 None:intergenic 30.0%
ATACTAAGGAAAACTAATCG+GGG + chr5_1:26666614-26666633 None:intergenic 30.0%
TTAGAGTAGTAGGTATACTA+AGG + chr5_1:26666628-26666647 None:intergenic 30.0%
! AACTTACAGTTTAGAGTAGT+AGG + chr5_1:26666638-26666657 None:intergenic 30.0%
! CTAAACTGTAAGTTTGTTCA+TGG - chr5_1:26666644-26666663 Msa0726170:intron 30.0%
GTATAAACCATGCAATATGT+TGG + chr5_1:26666717-26666736 None:intergenic 30.0%
ATAGTCAAAGTACAATTGCT+TGG + chr5_1:26666900-26666919 None:intergenic 30.0%
TTGATCTTTGCAAGAAAATG+AGG - chr5_1:26666978-26666997 Msa0726170:CDS 30.0%
TGATCTTTGCAAGAAAATGA+GGG - chr5_1:26666979-26666998 Msa0726170:CDS 30.0%
! ATACACATTTTTGTTCCCTT+TGG + chr5_1:26667179-26667198 None:intergenic 30.0%
! AAATTTGAAGTGTGCTAGAT+AGG - chr5_1:26667295-26667314 Msa0726170:five_prime_UTR 30.0%
! AATTTGAAGTGTGCTAGATA+GGG - chr5_1:26667296-26667315 Msa0726170:five_prime_UTR 30.0%
TGGAAGAAGAGAAGTTAGTT+TGG + chr5_1:26663284-26663303 None:intergenic 35.0%
TGGAAAAATTCCTGGAAACT+CGG - chr5_1:26663558-26663577 Msa0726170:CDS 35.0%
ATCATAGCTGCTAGAATCAA+AGG + chr5_1:26663644-26663663 None:intergenic 35.0%
TTTGATTCTAGCAGCTATGA+TGG - chr5_1:26663643-26663662 Msa0726170:intron 35.0%
! GCTTATGGTAAGGGTATATT+TGG - chr5_1:26663774-26663793 Msa0726170:intron 35.0%
CACTCTTGTACATCCAAATA+GGG - chr5_1:26663995-26664014 Msa0726170:intron 35.0%
TCTAGTGAGAAATCCCTATT+TGG + chr5_1:26664011-26664030 None:intergenic 35.0%
! CTATTTGCAACTGTTTTCAG+GGG + chr5_1:26664064-26664083 None:intergenic 35.0%
AAACAGTTGCAAATAGTTGG+TGG - chr5_1:26664068-26664087 Msa0726170:intron 35.0%
ATCATCAACTTAGCTAAGCT+CGG - chr5_1:26664347-26664366 Msa0726170:intron 35.0%
! TAGGATTTTTCGTTGTAGAG+GGG + chr5_1:26664382-26664401 None:intergenic 35.0%
GAAAACTACTTCAATGGAAG+AGG - chr5_1:26664441-26664460 Msa0726170:CDS 35.0%
CTCTAGACTAATGATATCCT+TGG - chr5_1:26664532-26664551 Msa0726170:intron 35.0%
GACATGTATAAAATGACAGC+GGG - chr5_1:26664858-26664877 Msa0726170:intron 35.0%
! TCGTTCAGCTATTGCATTTT+GGG + chr5_1:26664902-26664921 None:intergenic 35.0%
! ATCGTTCAGCTATTGCATTT+TGG + chr5_1:26664903-26664922 None:intergenic 35.0%
TATGCAAATGTATGCAAGTG+TGG + chr5_1:26664976-26664995 None:intergenic 35.0%
TCCTTCACCTCATTAAAGAT+GGG + chr5_1:26665016-26665035 None:intergenic 35.0%
CGTTTATGCATAGAGCTATT+GGG + chr5_1:26665046-26665065 None:intergenic 35.0%
TCGTTTATGCATAGAGCTAT+TGG + chr5_1:26665047-26665066 None:intergenic 35.0%
GGACAAATTGACAAATCACA+AGG + chr5_1:26665246-26665265 None:intergenic 35.0%
! ACCTGTTTATTTAGGGTTAG+GGG - chr5_1:26665699-26665718 Msa0726170:intron 35.0%
GTCTTGTATCCCTGTAATTA+AGG - chr5_1:26665721-26665740 Msa0726170:intron 35.0%
ATAATACTGTCGAAGTTGTG+AGG + chr5_1:26665825-26665844 None:intergenic 35.0%
!! TGGTGTAGATGTTTTGAACA+TGG - chr5_1:26665860-26665879 Msa0726170:intron 35.0%
AATCATACGAGTCGAATCTA+TGG - chr5_1:26665914-26665933 Msa0726170:intron 35.0%
ACATATACAGATCTCCATTG+AGG + chr5_1:26665950-26665969 None:intergenic 35.0%
!!! GCACAATTGGTTTTCCTTTT+GGG + chr5_1:26666151-26666170 None:intergenic 35.0%
!!! TGCACAATTGGTTTTCCTTT+TGG + chr5_1:26666152-26666171 None:intergenic 35.0%
TGAAAACCCGGAGAAATATA+AGG - chr5_1:26666175-26666194 Msa0726170:intron 35.0%
ATCACACCTTATATTTCTCC+GGG + chr5_1:26666184-26666203 None:intergenic 35.0%
! CTTGGCCTATTGTTTTCAAA+AGG - chr5_1:26666293-26666312 Msa0726170:intron 35.0%
! GATTTTCTATTGCAGCTCTT+CGG + chr5_1:26666325-26666344 None:intergenic 35.0%
AATCAGTCTAAACAAGCAAG+GGG - chr5_1:26666341-26666360 Msa0726170:intron 35.0%
! GTTTCATTTTACCAGGTTGT+GGG + chr5_1:26666680-26666699 None:intergenic 35.0%
! TGTTTCATTTTACCAGGTTG+TGG + chr5_1:26666681-26666700 None:intergenic 35.0%
GGTATTTGAAGATGAAAACG+AGG - chr5_1:26666799-26666818 Msa0726170:intron 35.0%
AGATTAAGCTTAAGGCTTTC+GGG + chr5_1:26667046-26667065 None:intergenic 35.0%
CAGATTAAGCTTAAGGCTTT+CGG + chr5_1:26667047-26667066 None:intergenic 35.0%
CAGATCATCTTGATCTTCAA+GGG + chr5_1:26667086-26667105 None:intergenic 35.0%
TCAGATCATCTTGATCTTCA+AGG + chr5_1:26667087-26667106 None:intergenic 35.0%
AAATTCAACTCCCTTGTGAT+GGG - chr5_1:26667111-26667130 Msa0726170:CDS 35.0%
TGGAAGAAGAGAAGTTAGTT+TGG + chr5_1:26663284-26663303 None:intergenic 35.0%
TGGAAAAATTCCTGGAAACT+CGG - chr5_1:26663558-26663577 Msa0726170:CDS 35.0%
ATCATAGCTGCTAGAATCAA+AGG + chr5_1:26663644-26663663 None:intergenic 35.0%
TTTGATTCTAGCAGCTATGA+TGG - chr5_1:26663643-26663662 Msa0726170:intron 35.0%
! GCTTATGGTAAGGGTATATT+TGG - chr5_1:26663774-26663793 Msa0726170:intron 35.0%
CACTCTTGTACATCCAAATA+GGG - chr5_1:26663995-26664014 Msa0726170:intron 35.0%
TCTAGTGAGAAATCCCTATT+TGG + chr5_1:26664011-26664030 None:intergenic 35.0%
! CTATTTGCAACTGTTTTCAG+GGG + chr5_1:26664064-26664083 None:intergenic 35.0%
AAACAGTTGCAAATAGTTGG+TGG - chr5_1:26664068-26664087 Msa0726170:intron 35.0%
ATCATCAACTTAGCTAAGCT+CGG - chr5_1:26664347-26664366 Msa0726170:intron 35.0%
! TAGGATTTTTCGTTGTAGAG+GGG + chr5_1:26664382-26664401 None:intergenic 35.0%
GAAAACTACTTCAATGGAAG+AGG - chr5_1:26664441-26664460 Msa0726170:CDS 35.0%
CTCTAGACTAATGATATCCT+TGG - chr5_1:26664532-26664551 Msa0726170:intron 35.0%
GACATGTATAAAATGACAGC+GGG - chr5_1:26664858-26664877 Msa0726170:intron 35.0%
! TCGTTCAGCTATTGCATTTT+GGG + chr5_1:26664902-26664921 None:intergenic 35.0%
! ATCGTTCAGCTATTGCATTT+TGG + chr5_1:26664903-26664922 None:intergenic 35.0%
TATGCAAATGTATGCAAGTG+TGG + chr5_1:26664976-26664995 None:intergenic 35.0%
TCCTTCACCTCATTAAAGAT+GGG + chr5_1:26665016-26665035 None:intergenic 35.0%
CGTTTATGCATAGAGCTATT+GGG + chr5_1:26665046-26665065 None:intergenic 35.0%
TCGTTTATGCATAGAGCTAT+TGG + chr5_1:26665047-26665066 None:intergenic 35.0%
GGACAAATTGACAAATCACA+AGG + chr5_1:26665246-26665265 None:intergenic 35.0%
! ACCTGTTTATTTAGGGTTAG+GGG - chr5_1:26665699-26665718 Msa0726170:intron 35.0%
GTCTTGTATCCCTGTAATTA+AGG - chr5_1:26665721-26665740 Msa0726170:intron 35.0%
ATAATACTGTCGAAGTTGTG+AGG + chr5_1:26665825-26665844 None:intergenic 35.0%
!! TGGTGTAGATGTTTTGAACA+TGG - chr5_1:26665860-26665879 Msa0726170:intron 35.0%
AATCATACGAGTCGAATCTA+TGG - chr5_1:26665914-26665933 Msa0726170:intron 35.0%
ACATATACAGATCTCCATTG+AGG + chr5_1:26665950-26665969 None:intergenic 35.0%
!!! GCACAATTGGTTTTCCTTTT+GGG + chr5_1:26666151-26666170 None:intergenic 35.0%
!!! TGCACAATTGGTTTTCCTTT+TGG + chr5_1:26666152-26666171 None:intergenic 35.0%
TGAAAACCCGGAGAAATATA+AGG - chr5_1:26666175-26666194 Msa0726170:intron 35.0%
ATCACACCTTATATTTCTCC+GGG + chr5_1:26666184-26666203 None:intergenic 35.0%
! CTTGGCCTATTGTTTTCAAA+AGG - chr5_1:26666293-26666312 Msa0726170:intron 35.0%
! GATTTTCTATTGCAGCTCTT+CGG + chr5_1:26666325-26666344 None:intergenic 35.0%
AATCAGTCTAAACAAGCAAG+GGG - chr5_1:26666341-26666360 Msa0726170:intron 35.0%
! GTTTCATTTTACCAGGTTGT+GGG + chr5_1:26666680-26666699 None:intergenic 35.0%
! TGTTTCATTTTACCAGGTTG+TGG + chr5_1:26666681-26666700 None:intergenic 35.0%
GGTATTTGAAGATGAAAACG+AGG - chr5_1:26666799-26666818 Msa0726170:intron 35.0%
AGATTAAGCTTAAGGCTTTC+GGG + chr5_1:26667046-26667065 None:intergenic 35.0%
CAGATTAAGCTTAAGGCTTT+CGG + chr5_1:26667047-26667066 None:intergenic 35.0%
CAGATCATCTTGATCTTCAA+GGG + chr5_1:26667086-26667105 None:intergenic 35.0%
TCAGATCATCTTGATCTTCA+AGG + chr5_1:26667087-26667106 None:intergenic 35.0%
AAATTCAACTCCCTTGTGAT+GGG - chr5_1:26667111-26667130 Msa0726170:CDS 35.0%
CACATGGATGGAAAAATTCC+TGG - chr5_1:26663550-26663569 Msa0726170:CDS 40.0%
GCACTCTTGTACATCCAAAT+AGG - chr5_1:26663994-26664013 Msa0726170:intron 40.0%
AAGCTAGTGAGATCCATTTG+AGG + chr5_1:26664495-26664514 None:intergenic 40.0%
! TATCATTAGTCTAGAGCGAG+AGG + chr5_1:26664528-26664547 None:intergenic 40.0%
!!! GTTTTTTCTCCTCTCTGTCA+TGG - chr5_1:26664665-26664684 Msa0726170:intron 40.0%
! GTTTTACAACCATGACAGAG+AGG + chr5_1:26664677-26664696 None:intergenic 40.0%
! AATCAAGTGTTGCAAAGGTG+AGG + chr5_1:26664953-26664972 None:intergenic 40.0%
! TGTGGAATCAAGTGTTGCAA+AGG + chr5_1:26664958-26664977 None:intergenic 40.0%
! ATTAAAGATGGGCTCACGTT+GGG + chr5_1:26665005-26665024 None:intergenic 40.0%
CTCCTTCACCTCATTAAAGA+TGG + chr5_1:26665017-26665036 None:intergenic 40.0%
CACTACACACTTGCAACAAT+GGG + chr5_1:26665097-26665116 None:intergenic 40.0%
TCACTACACACTTGCAACAA+TGG + chr5_1:26665098-26665117 None:intergenic 40.0%
AAGTGTGTAGTGAACTGAAC+AGG - chr5_1:26665105-26665124 Msa0726170:intron 40.0%
GTGAACTGAACAGGTTAATG+AGG - chr5_1:26665114-26665133 Msa0726170:intron 40.0%
CATTAGAGCTAGACTCAACT+CGG + chr5_1:26665179-26665198 None:intergenic 40.0%
!! AGTTGAGTCTAGCTCTAATG+CGG - chr5_1:26665179-26665198 Msa0726170:intron 40.0%
TATCAAGTAGTGAGGATGGA+GGG + chr5_1:26665215-26665234 None:intergenic 40.0%
TTATCAAGTAGTGAGGATGG+AGG + chr5_1:26665216-26665235 None:intergenic 40.0%
ACATGATAGGTTCTCAACTC+AGG + chr5_1:26665303-26665322 None:intergenic 40.0%
GTCTTGTATAGAGAGTGAGT+CGG - chr5_1:26665387-26665406 Msa0726170:intron 40.0%
TCTTGTATAGAGAGTGAGTC+GGG - chr5_1:26665388-26665407 Msa0726170:intron 40.0%
ACCCCTAACCCTAAATAAAC+AGG + chr5_1:26665703-26665722 None:intergenic 40.0%
ATGGAGATTTCACACCTCAA+TGG - chr5_1:26665933-26665952 Msa0726170:intron 40.0%
!!! CAGTTTTAGATGACAACCCT+TGG - chr5_1:26666094-26666113 Msa0726170:intron 40.0%
!! GCTTTGAAGTTTCTCTCCAA+GGG + chr5_1:26666113-26666132 None:intergenic 40.0%
!! TTTTGGGTGAGTACATACAC+AGG + chr5_1:26666135-26666154 None:intergenic 40.0%
TGTGTATGTACTCACCCAAA+AGG - chr5_1:26666134-26666153 Msa0726170:intron 40.0%
AATTGTGCACGATGAAAACC+CGG - chr5_1:26666163-26666182 Msa0726170:intron 40.0%
AGATATTAGAGATGGAGTGC+TGG - chr5_1:26666391-26666410 Msa0726170:intron 40.0%
TGCTTTGGTAAATGCTAACC+AGG - chr5_1:26666571-26666590 Msa0726170:intron 40.0%
TCATCGACCAACATATTGCA+TGG - chr5_1:26666707-26666726 Msa0726170:intron 40.0%
!! AAGTATTGTGACTTGCTGCA+AGG - chr5_1:26666827-26666846 Msa0726170:intron 40.0%
! CTTGGTTATTTGTACCGATG+AGG + chr5_1:26666882-26666901 None:intergenic 40.0%
TTAATCTGCGAGCTCGAAAA+CGG - chr5_1:26667059-26667078 Msa0726170:CDS 40.0%
GAAATTCAACTCCCTTGTGA+TGG - chr5_1:26667110-26667129 Msa0726170:CDS 40.0%
TAACACCCAAAACAGCCAAA+GGG - chr5_1:26667161-26667180 Msa0726170:CDS 40.0%
!! TTGTTCCCTTTGGCTGTTTT+GGG + chr5_1:26667169-26667188 None:intergenic 40.0%
! TTTGTTCCCTTTGGCTGTTT+TGG + chr5_1:26667170-26667189 None:intergenic 40.0%
TGCTAGATAGGGTGAATTCT+AGG - chr5_1:26667307-26667326 Msa0726170:five_prime_UTR 40.0%
CACATGGATGGAAAAATTCC+TGG - chr5_1:26663550-26663569 Msa0726170:CDS 40.0%
GCACTCTTGTACATCCAAAT+AGG - chr5_1:26663994-26664013 Msa0726170:intron 40.0%
AAGCTAGTGAGATCCATTTG+AGG + chr5_1:26664495-26664514 None:intergenic 40.0%
! TATCATTAGTCTAGAGCGAG+AGG + chr5_1:26664528-26664547 None:intergenic 40.0%
!!! GTTTTTTCTCCTCTCTGTCA+TGG - chr5_1:26664665-26664684 Msa0726170:intron 40.0%
! GTTTTACAACCATGACAGAG+AGG + chr5_1:26664677-26664696 None:intergenic 40.0%
! AATCAAGTGTTGCAAAGGTG+AGG + chr5_1:26664953-26664972 None:intergenic 40.0%
! TGTGGAATCAAGTGTTGCAA+AGG + chr5_1:26664958-26664977 None:intergenic 40.0%
! ATTAAAGATGGGCTCACGTT+GGG + chr5_1:26665005-26665024 None:intergenic 40.0%
CTCCTTCACCTCATTAAAGA+TGG + chr5_1:26665017-26665036 None:intergenic 40.0%
CACTACACACTTGCAACAAT+GGG + chr5_1:26665097-26665116 None:intergenic 40.0%
TCACTACACACTTGCAACAA+TGG + chr5_1:26665098-26665117 None:intergenic 40.0%
AAGTGTGTAGTGAACTGAAC+AGG - chr5_1:26665105-26665124 Msa0726170:intron 40.0%
GTGAACTGAACAGGTTAATG+AGG - chr5_1:26665114-26665133 Msa0726170:intron 40.0%
CATTAGAGCTAGACTCAACT+CGG + chr5_1:26665179-26665198 None:intergenic 40.0%
!! AGTTGAGTCTAGCTCTAATG+CGG - chr5_1:26665179-26665198 Msa0726170:intron 40.0%
TATCAAGTAGTGAGGATGGA+GGG + chr5_1:26665215-26665234 None:intergenic 40.0%
TTATCAAGTAGTGAGGATGG+AGG + chr5_1:26665216-26665235 None:intergenic 40.0%
ACATGATAGGTTCTCAACTC+AGG + chr5_1:26665303-26665322 None:intergenic 40.0%
GTCTTGTATAGAGAGTGAGT+CGG - chr5_1:26665387-26665406 Msa0726170:intron 40.0%
TCTTGTATAGAGAGTGAGTC+GGG - chr5_1:26665388-26665407 Msa0726170:intron 40.0%
ACCCCTAACCCTAAATAAAC+AGG + chr5_1:26665703-26665722 None:intergenic 40.0%
ATGGAGATTTCACACCTCAA+TGG - chr5_1:26665933-26665952 Msa0726170:intron 40.0%
!!! CAGTTTTAGATGACAACCCT+TGG - chr5_1:26666094-26666113 Msa0726170:intron 40.0%
!! GCTTTGAAGTTTCTCTCCAA+GGG + chr5_1:26666113-26666132 None:intergenic 40.0%
!! TTTTGGGTGAGTACATACAC+AGG + chr5_1:26666135-26666154 None:intergenic 40.0%
TGTGTATGTACTCACCCAAA+AGG - chr5_1:26666134-26666153 Msa0726170:intron 40.0%
AATTGTGCACGATGAAAACC+CGG - chr5_1:26666163-26666182 Msa0726170:intron 40.0%
AGATATTAGAGATGGAGTGC+TGG - chr5_1:26666391-26666410 Msa0726170:intron 40.0%
TGCTTTGGTAAATGCTAACC+AGG - chr5_1:26666571-26666590 Msa0726170:intron 40.0%
TCATCGACCAACATATTGCA+TGG - chr5_1:26666707-26666726 Msa0726170:intron 40.0%
!! AAGTATTGTGACTTGCTGCA+AGG - chr5_1:26666827-26666846 Msa0726170:intron 40.0%
! CTTGGTTATTTGTACCGATG+AGG + chr5_1:26666882-26666901 None:intergenic 40.0%
TTAATCTGCGAGCTCGAAAA+CGG - chr5_1:26667059-26667078 Msa0726170:CDS 40.0%
GAAATTCAACTCCCTTGTGA+TGG - chr5_1:26667110-26667129 Msa0726170:CDS 40.0%
TAACACCCAAAACAGCCAAA+GGG - chr5_1:26667161-26667180 Msa0726170:CDS 40.0%
!! TTGTTCCCTTTGGCTGTTTT+GGG + chr5_1:26667169-26667188 None:intergenic 40.0%
! TTTGTTCCCTTTGGCTGTTT+TGG + chr5_1:26667170-26667189 None:intergenic 40.0%
TGCTAGATAGGGTGAATTCT+AGG - chr5_1:26667307-26667326 Msa0726170:five_prime_UTR 40.0%
TCCACACTTCACATCAACCA+TGG - chr5_1:26663300-26663319 Msa0726170:three_prime_UTR 45.0%
! TCCATGGTTGATGTGAAGTG+TGG + chr5_1:26663304-26663323 None:intergenic 45.0%
AACTGAAGGGAGAGAATCCA+TGG + chr5_1:26663320-26663339 None:intergenic 45.0%
CGATGGAAGGTGAAACTGAA+GGG + chr5_1:26663333-26663352 None:intergenic 45.0%
TGAGGTGTAGAGATGAGTCT+CGG + chr5_1:26663424-26663443 None:intergenic 45.0%
AAGAACTCATCCGAGTTTCC+AGG + chr5_1:26663571-26663590 None:intergenic 45.0%
!! TTGTGCGTTTTGGTCAAGAG+AGG - chr5_1:26664243-26664262 Msa0726170:CDS 45.0%
!! AAAGACATCGGCTCCTCAAA+TGG - chr5_1:26664479-26664498 Msa0726170:intron 45.0%
GAACAGGCTGAAGCTAAAAG+TGG - chr5_1:26664572-26664591 Msa0726170:intron 45.0%
ATTCGGCTAGACAGTTGAAC+AGG - chr5_1:26664793-26664812 Msa0726170:intron 45.0%
! CATTAAAGATGGGCTCACGT+TGG + chr5_1:26665006-26665025 None:intergenic 45.0%
ACGTGAGCCCATCTTTAATG+AGG - chr5_1:26665006-26665025 Msa0726170:intron 45.0%
GCCCATCTTTAATGAGGTGA+AGG - chr5_1:26665012-26665031 Msa0726170:intron 45.0%
!! GTTGAGTCTAGCTCTAATGC+GGG - chr5_1:26665180-26665199 Msa0726170:intron 45.0%
!! TTGAGTCTAGCTCTAATGCG+GGG - chr5_1:26665181-26665200 Msa0726170:intron 45.0%
!! GGCTTTGAAGTTTCTCTCCA+AGG + chr5_1:26666114-26666133 None:intergenic 45.0%
! GGGTTTTCATCGTGCACAAT+TGG + chr5_1:26666164-26666183 None:intergenic 45.0%
AGCGAAGTTGAAAGAGAGCT+TGG - chr5_1:26666275-26666294 Msa0726170:intron 45.0%
AGTCTAAACAAGCAAGGGGA+GGG - chr5_1:26666345-26666364 Msa0726170:intron 45.0%
CAATTTGGCAATGTTGGTGC+AGG - chr5_1:26666778-26666797 Msa0726170:intron 45.0%
!! TATTGTGACTTGCTGCAAGG+AGG - chr5_1:26666830-26666849 Msa0726170:intron 45.0%
!! ATTGTGACTTGCTGCAAGGA+GGG - chr5_1:26666831-26666850 Msa0726170:intron 45.0%
GAGCTCGCAGATTAAGCTTA+AGG + chr5_1:26667054-26667073 None:intergenic 45.0%
TCGCTTCTTTCCCATCACAA+GGG + chr5_1:26667124-26667143 None:intergenic 45.0%
GTAACACCCAAAACAGCCAA+AGG - chr5_1:26667160-26667179 Msa0726170:CDS 45.0%
TCCACACTTCACATCAACCA+TGG - chr5_1:26663300-26663319 Msa0726170:three_prime_UTR 45.0%
! TCCATGGTTGATGTGAAGTG+TGG + chr5_1:26663304-26663323 None:intergenic 45.0%
AACTGAAGGGAGAGAATCCA+TGG + chr5_1:26663320-26663339 None:intergenic 45.0%
CGATGGAAGGTGAAACTGAA+GGG + chr5_1:26663333-26663352 None:intergenic 45.0%
TGAGGTGTAGAGATGAGTCT+CGG + chr5_1:26663424-26663443 None:intergenic 45.0%
AAGAACTCATCCGAGTTTCC+AGG + chr5_1:26663571-26663590 None:intergenic 45.0%
!! TTGTGCGTTTTGGTCAAGAG+AGG - chr5_1:26664243-26664262 Msa0726170:CDS 45.0%
!! AAAGACATCGGCTCCTCAAA+TGG - chr5_1:26664479-26664498 Msa0726170:intron 45.0%
GAACAGGCTGAAGCTAAAAG+TGG - chr5_1:26664572-26664591 Msa0726170:intron 45.0%
ATTCGGCTAGACAGTTGAAC+AGG - chr5_1:26664793-26664812 Msa0726170:intron 45.0%
! CATTAAAGATGGGCTCACGT+TGG + chr5_1:26665006-26665025 None:intergenic 45.0%
ACGTGAGCCCATCTTTAATG+AGG - chr5_1:26665006-26665025 Msa0726170:intron 45.0%
GCCCATCTTTAATGAGGTGA+AGG - chr5_1:26665012-26665031 Msa0726170:intron 45.0%
!! GTTGAGTCTAGCTCTAATGC+GGG - chr5_1:26665180-26665199 Msa0726170:intron 45.0%
!! TTGAGTCTAGCTCTAATGCG+GGG - chr5_1:26665181-26665200 Msa0726170:intron 45.0%
!! GGCTTTGAAGTTTCTCTCCA+AGG + chr5_1:26666114-26666133 None:intergenic 45.0%
! GGGTTTTCATCGTGCACAAT+TGG + chr5_1:26666164-26666183 None:intergenic 45.0%
AGCGAAGTTGAAAGAGAGCT+TGG - chr5_1:26666275-26666294 Msa0726170:intron 45.0%
AGTCTAAACAAGCAAGGGGA+GGG - chr5_1:26666345-26666364 Msa0726170:intron 45.0%
CAATTTGGCAATGTTGGTGC+AGG - chr5_1:26666778-26666797 Msa0726170:intron 45.0%
!! TATTGTGACTTGCTGCAAGG+AGG - chr5_1:26666830-26666849 Msa0726170:intron 45.0%
!! ATTGTGACTTGCTGCAAGGA+GGG - chr5_1:26666831-26666850 Msa0726170:intron 45.0%
GAGCTCGCAGATTAAGCTTA+AGG + chr5_1:26667054-26667073 None:intergenic 45.0%
TCGCTTCTTTCCCATCACAA+GGG + chr5_1:26667124-26667143 None:intergenic 45.0%
GTAACACCCAAAACAGCCAA+AGG - chr5_1:26667160-26667179 Msa0726170:CDS 45.0%
GCGATGGAAGGTGAAACTGA+AGG + chr5_1:26663334-26663353 None:intergenic 50.0%
AGGTGTAGAGATGAGTCTCG+GGG + chr5_1:26663422-26663441 None:intergenic 50.0%
GAGGTGTAGAGATGAGTCTC+GGG + chr5_1:26663423-26663442 None:intergenic 50.0%
CTACACCTCACTTCCGAACA+AGG - chr5_1:26663434-26663453 Msa0726170:three_prime_UTR 50.0%
CCTTTCTCCTCCTCCTTGTT+CGG + chr5_1:26663450-26663469 None:intergenic 50.0%
!! GAAGTATCGTGCAACGTCGT+CGG - chr5_1:26663469-26663488 Msa0726170:exon 50.0%
AGGAGATGACAGTGGAAACG+AGG - chr5_1:26663507-26663526 Msa0726170:CDS 50.0%
AGATGACAGTGGAAACGAGG+AGG - chr5_1:26663510-26663529 Msa0726170:CDS 50.0%
!! GAGAAAGCGCTTCACATGGA+TGG - chr5_1:26663538-26663557 Msa0726170:CDS 50.0%
TCCGACGCATGTCATAAGCA+CGG + chr5_1:26663609-26663628 None:intergenic 50.0%
! TGCTGCGTGTTTGTGCGTTT+TGG - chr5_1:26664233-26664252 Msa0726170:CDS 50.0%
AGTTACTGAGCGGCATCAAG+AGG - chr5_1:26664414-26664433 Msa0726170:CDS 50.0%
! GGCTTTAGCTCATCTGAGCA+GGG + chr5_1:26665148-26665167 None:intergenic 50.0%
! AGGCTTTAGCTCATCTGAGC+AGG + chr5_1:26665149-26665168 None:intergenic 50.0%
AGACTCAACTCGGTAGAGCT+AGG + chr5_1:26665169-26665188 None:intergenic 50.0%
TATAGAGAGTGAGTCGGGTC+AGG - chr5_1:26665393-26665412 Msa0726170:intron 50.0%
CAGTCTAAACAAGCAAGGGG+AGG - chr5_1:26666344-26666363 Msa0726170:intron 50.0%
TTACCAGGTTGTGGGCACTA+GGG + chr5_1:26666672-26666691 None:intergenic 50.0%
TTTACCAGGTTGTGGGCACT+AGG + chr5_1:26666673-26666692 None:intergenic 50.0%
! TACCGATGAGGCGTCTATCT+CGG + chr5_1:26666870-26666889 None:intergenic 50.0%
! TTAAGGCTTTCGGGTACAGG+AGG + chr5_1:26667037-26667056 None:intergenic 50.0%
! AGCTTAAGGCTTTCGGGTAC+AGG + chr5_1:26667040-26667059 None:intergenic 50.0%
GTCGCTTCTTTCCCATCACA+AGG + chr5_1:26667125-26667144 None:intergenic 50.0%
GCGATGGAAGGTGAAACTGA+AGG + chr5_1:26663334-26663353 None:intergenic 50.0%
AGGTGTAGAGATGAGTCTCG+GGG + chr5_1:26663422-26663441 None:intergenic 50.0%
GAGGTGTAGAGATGAGTCTC+GGG + chr5_1:26663423-26663442 None:intergenic 50.0%
CTACACCTCACTTCCGAACA+AGG - chr5_1:26663434-26663453 Msa0726170:three_prime_UTR 50.0%
CCTTTCTCCTCCTCCTTGTT+CGG + chr5_1:26663450-26663469 None:intergenic 50.0%
!! GAAGTATCGTGCAACGTCGT+CGG - chr5_1:26663469-26663488 Msa0726170:exon 50.0%
AGGAGATGACAGTGGAAACG+AGG - chr5_1:26663507-26663526 Msa0726170:CDS 50.0%
AGATGACAGTGGAAACGAGG+AGG - chr5_1:26663510-26663529 Msa0726170:CDS 50.0%
!! GAGAAAGCGCTTCACATGGA+TGG - chr5_1:26663538-26663557 Msa0726170:CDS 50.0%
TCCGACGCATGTCATAAGCA+CGG + chr5_1:26663609-26663628 None:intergenic 50.0%
! TGCTGCGTGTTTGTGCGTTT+TGG - chr5_1:26664233-26664252 Msa0726170:CDS 50.0%
AGTTACTGAGCGGCATCAAG+AGG - chr5_1:26664414-26664433 Msa0726170:CDS 50.0%
! GGCTTTAGCTCATCTGAGCA+GGG + chr5_1:26665148-26665167 None:intergenic 50.0%
! AGGCTTTAGCTCATCTGAGC+AGG + chr5_1:26665149-26665168 None:intergenic 50.0%
AGACTCAACTCGGTAGAGCT+AGG + chr5_1:26665169-26665188 None:intergenic 50.0%
TATAGAGAGTGAGTCGGGTC+AGG - chr5_1:26665393-26665412 Msa0726170:intron 50.0%
CAGTCTAAACAAGCAAGGGG+AGG - chr5_1:26666344-26666363 Msa0726170:intron 50.0%
TTACCAGGTTGTGGGCACTA+GGG + chr5_1:26666672-26666691 None:intergenic 50.0%
TTTACCAGGTTGTGGGCACT+AGG + chr5_1:26666673-26666692 None:intergenic 50.0%
! TACCGATGAGGCGTCTATCT+CGG + chr5_1:26666870-26666889 None:intergenic 50.0%
! TTAAGGCTTTCGGGTACAGG+AGG + chr5_1:26667037-26667056 None:intergenic 50.0%
! AGCTTAAGGCTTTCGGGTAC+AGG + chr5_1:26667040-26667059 None:intergenic 50.0%
GTCGCTTCTTTCCCATCACA+AGG + chr5_1:26667125-26667144 None:intergenic 50.0%
GATGGCGAGAGAAGAGAGAG+AGG + chr5_1:26663396-26663415 None:intergenic 55.0%
GGTGTAGAGATGAGTCTCGG+GGG + chr5_1:26663421-26663440 None:intergenic 55.0%
CACCTCACTTCCGAACAAGG+AGG - chr5_1:26663437-26663456 Msa0726170:three_prime_UTR 55.0%
CTCCTCCTTGTTCGGAAGTG+AGG + chr5_1:26663442-26663461 None:intergenic 55.0%
CTCACTTCCGAACAAGGAGG+AGG - chr5_1:26663440-26663459 Msa0726170:three_prime_UTR 55.0%
CCGAACAAGGAGGAGGAGAA+AGG - chr5_1:26663447-26663466 Msa0726170:three_prime_UTR 55.0%
TGACAGTGGAAACGAGGAGG+AGG - chr5_1:26663513-26663532 Msa0726170:CDS 55.0%
!! GGTGGAGAAAGCGCTTCACA+TGG - chr5_1:26663534-26663553 Msa0726170:CDS 55.0%
ACGCATGTCATAAGCACGGG+AGG + chr5_1:26663605-26663624 None:intergenic 55.0%
CCGACGCATGTCATAAGCAC+GGG + chr5_1:26663608-26663627 None:intergenic 55.0%
CCCGTGCTTATGACATGCGT+CGG - chr5_1:26663605-26663624 Msa0726170:intron 55.0%
GTAGTGAGGATGGAGGGACT+GGG + chr5_1:26665209-26665228 None:intergenic 55.0%
AGTAGTGAGGATGGAGGGAC+TGG + chr5_1:26665210-26665229 None:intergenic 55.0%
! TTGCTGCAAGGAGGGTGTGA+GGG - chr5_1:26666839-26666858 Msa0726170:intron 55.0%
TGCCGAGATAGACGCCTCAT+CGG - chr5_1:26666865-26666884 Msa0726170:intron 55.0%
CTTGCAGTTCTATTCCGCCG+AGG - chr5_1:26667004-26667023 Msa0726170:CDS 55.0%
CAGTTCTATTCCGCCGAGGT+AGG - chr5_1:26667008-26667027 Msa0726170:CDS 55.0%
!! GTACAGGAGGTGTCCTACCT+CGG + chr5_1:26667024-26667043 None:intergenic 55.0%
GATGGCGAGAGAAGAGAGAG+AGG + chr5_1:26663396-26663415 None:intergenic 55.0%
GGTGTAGAGATGAGTCTCGG+GGG + chr5_1:26663421-26663440 None:intergenic 55.0%
CACCTCACTTCCGAACAAGG+AGG - chr5_1:26663437-26663456 Msa0726170:three_prime_UTR 55.0%
CTCCTCCTTGTTCGGAAGTG+AGG + chr5_1:26663442-26663461 None:intergenic 55.0%
CTCACTTCCGAACAAGGAGG+AGG - chr5_1:26663440-26663459 Msa0726170:three_prime_UTR 55.0%
CCGAACAAGGAGGAGGAGAA+AGG - chr5_1:26663447-26663466 Msa0726170:three_prime_UTR 55.0%
TGACAGTGGAAACGAGGAGG+AGG - chr5_1:26663513-26663532 Msa0726170:CDS 55.0%
!! GGTGGAGAAAGCGCTTCACA+TGG - chr5_1:26663534-26663553 Msa0726170:CDS 55.0%
ACGCATGTCATAAGCACGGG+AGG + chr5_1:26663605-26663624 None:intergenic 55.0%
CCGACGCATGTCATAAGCAC+GGG + chr5_1:26663608-26663627 None:intergenic 55.0%
CCCGTGCTTATGACATGCGT+CGG - chr5_1:26663605-26663624 Msa0726170:intron 55.0%
GTAGTGAGGATGGAGGGACT+GGG + chr5_1:26665209-26665228 None:intergenic 55.0%
AGTAGTGAGGATGGAGGGAC+TGG + chr5_1:26665210-26665229 None:intergenic 55.0%
! TTGCTGCAAGGAGGGTGTGA+GGG - chr5_1:26666839-26666858 Msa0726170:intron 55.0%
TGCCGAGATAGACGCCTCAT+CGG - chr5_1:26666865-26666884 Msa0726170:intron 55.0%
CTTGCAGTTCTATTCCGCCG+AGG - chr5_1:26667004-26667023 Msa0726170:CDS 55.0%
CAGTTCTATTCCGCCGAGGT+AGG - chr5_1:26667008-26667027 Msa0726170:CDS 55.0%
!! GTACAGGAGGTGTCCTACCT+CGG + chr5_1:26667024-26667043 None:intergenic 55.0%
!! GACGGAAAGGGTTGGTGGGA+GGG + chr5_1:26663360-26663379 None:intergenic 60.0%
! TGGCGACGGAAAGGGTTGGT+GGG + chr5_1:26663364-26663383 None:intergenic 60.0%
AGAGAAGAGAGAGAGGCGGC+GGG + chr5_1:26663389-26663408 None:intergenic 60.0%
GAGAGAAGAGAGAGAGGCGG+CGG + chr5_1:26663390-26663409 None:intergenic 60.0%
GGCGAGAGAAGAGAGAGAGG+CGG + chr5_1:26663393-26663412 None:intergenic 60.0%
AGATGAGTCTCGGGGGCAGA+TGG + chr5_1:26663414-26663433 None:intergenic 60.0%
GTATCGTGCAACGTCGTCGG+CGG - chr5_1:26663472-26663491 Msa0726170:exon 60.0%
GGCAGAGGAGGAGATGACAG+TGG - chr5_1:26663499-26663518 Msa0726170:CDS 60.0%
CAGTGGAAACGAGGAGGAGG+TGG - chr5_1:26663516-26663535 Msa0726170:CDS 60.0%
GAGTCGGGTCAGGTCTACTC+TGG - chr5_1:26665403-26665422 Msa0726170:intron 60.0%
GTACCCTAGTGCCCACAACC+TGG - chr5_1:26666666-26666685 Msa0726170:intron 60.0%
! CTTGCTGCAAGGAGGGTGTG+AGG - chr5_1:26666838-26666857 Msa0726170:intron 60.0%
!! GACGGAAAGGGTTGGTGGGA+GGG + chr5_1:26663360-26663379 None:intergenic 60.0%
! TGGCGACGGAAAGGGTTGGT+GGG + chr5_1:26663364-26663383 None:intergenic 60.0%
AGAGAAGAGAGAGAGGCGGC+GGG + chr5_1:26663389-26663408 None:intergenic 60.0%
GAGAGAAGAGAGAGAGGCGG+CGG + chr5_1:26663390-26663409 None:intergenic 60.0%
GGCGAGAGAAGAGAGAGAGG+CGG + chr5_1:26663393-26663412 None:intergenic 60.0%
AGATGAGTCTCGGGGGCAGA+TGG + chr5_1:26663414-26663433 None:intergenic 60.0%
GTATCGTGCAACGTCGTCGG+CGG - chr5_1:26663472-26663491 Msa0726170:exon 60.0%
GGCAGAGGAGGAGATGACAG+TGG - chr5_1:26663499-26663518 Msa0726170:CDS 60.0%
CAGTGGAAACGAGGAGGAGG+TGG - chr5_1:26663516-26663535 Msa0726170:CDS 60.0%
GAGTCGGGTCAGGTCTACTC+TGG - chr5_1:26665403-26665422 Msa0726170:intron 60.0%
GTACCCTAGTGCCCACAACC+TGG - chr5_1:26666666-26666685 Msa0726170:intron 60.0%
! CTTGCTGCAAGGAGGGTGTG+AGG - chr5_1:26666838-26666857 Msa0726170:intron 60.0%
GTGGGAGGGAGAGCGATGGA+AGG + chr5_1:26663346-26663365 None:intergenic 65.0%
! GTTGGTGGGAGGGAGAGCGA+TGG + chr5_1:26663350-26663369 None:intergenic 65.0%
!! CGACGGAAAGGGTTGGTGGG+AGG + chr5_1:26663361-26663380 None:intergenic 65.0%
GTGGCGACGGAAAGGGTTGG+TGG + chr5_1:26663365-26663384 None:intergenic 65.0%
GGTGTGGCGACGGAAAGGGT+TGG + chr5_1:26663368-26663387 None:intergenic 65.0%
!! CAGGAGGTGTCCTACCTCGG+CGG + chr5_1:26667021-26667040 None:intergenic 65.0%
GTGGGAGGGAGAGCGATGGA+AGG + chr5_1:26663346-26663365 None:intergenic 65.0%
! GTTGGTGGGAGGGAGAGCGA+TGG + chr5_1:26663350-26663369 None:intergenic 65.0%
!! CGACGGAAAGGGTTGGTGGG+AGG + chr5_1:26663361-26663380 None:intergenic 65.0%
GTGGCGACGGAAAGGGTTGG+TGG + chr5_1:26663365-26663384 None:intergenic 65.0%
GGTGTGGCGACGGAAAGGGT+TGG + chr5_1:26663368-26663387 None:intergenic 65.0%
!! CAGGAGGTGTCCTACCTCGG+CGG + chr5_1:26667021-26667040 None:intergenic 65.0%
GGCGGGTGTGGCGACGGAAA+GGG + chr5_1:26663372-26663391 None:intergenic 70.0%
AGAGAGAGAGGCGGCGGGTG+TGG + chr5_1:26663384-26663403 None:intergenic 70.0%
TCGTGCAACGTCGTCGGCGG+CGG - chr5_1:26663475-26663494 Msa0726170:exon 70.0%
GGCGGGTGTGGCGACGGAAA+GGG + chr5_1:26663372-26663391 None:intergenic 70.0%
AGAGAGAGAGGCGGCGGGTG+TGG + chr5_1:26663384-26663403 None:intergenic 70.0%
TCGTGCAACGTCGTCGGCGG+CGG - chr5_1:26663475-26663494 Msa0726170:exon 70.0%
CGGCGGGTGTGGCGACGGAA+AGG + chr5_1:26663373-26663392 None:intergenic 75.0%
AGAGGCGGCGGGTGTGGCGA+CGG + chr5_1:26663378-26663397 None:intergenic 75.0%
TGCAACGTCGTCGGCGGCGG+CGG - chr5_1:26663478-26663497 Msa0726170:CDS 75.0%
CGGCGGGTGTGGCGACGGAA+AGG + chr5_1:26663373-26663392 None:intergenic 75.0%
AGAGGCGGCGGGTGTGGCGA+CGG + chr5_1:26663378-26663397 None:intergenic 75.0%
TGCAACGTCGTCGGCGGCGG+CGG - chr5_1:26663478-26663497 Msa0726170:CDS 75.0%
! GTCGTCGGCGGCGGCGGCAG+AGG - chr5_1:26663484-26663503 Msa0726170:CDS 85.0%
! GTCGGCGGCGGCGGCAGAGG+AGG - chr5_1:26663487-26663506 Msa0726170:CDS 85.0%
! GTCGTCGGCGGCGGCGGCAG+AGG - chr5_1:26663484-26663503 Msa0726170:CDS 85.0%
! GTCGGCGGCGGCGGCAGAGG+AGG - chr5_1:26663487-26663506 Msa0726170:CDS 85.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 26663253 26667334 26663253 ID=Msa0726170;Name=Msa0726170
chr5_1 mRNA 26663253 26667334 26663253 ID=Msa0726170-mRNA-1;Parent=Msa0726170;Name=Msa0726170-mRNA-1;_AED=0.15;_eAED=0.15;_QI=66|1|1|1|1|1|5|223|268
chr5_1 exon 26663253 26663613 26663253 ID=Msa0726170-mRNA-1:exon:9466;Parent=Msa0726170-mRNA-1
chr5_1 exon 26663701 26663787 26663701 ID=Msa0726170-mRNA-1:exon:9465;Parent=Msa0726170-mRNA-1
chr5_1 exon 26664175 26664310 26664175 ID=Msa0726170-mRNA-1:exon:9464;Parent=Msa0726170-mRNA-1
chr5_1 exon 26664391 26664490 26664391 ID=Msa0726170-mRNA-1:exon:9463;Parent=Msa0726170-mRNA-1
chr5_1 exon 26666923 26667334 26666923 ID=Msa0726170-mRNA-1:exon:9462;Parent=Msa0726170-mRNA-1
chr5_1 five_prime_UTR 26667269 26667334 26667269 ID=Msa0726170-mRNA-1:five_prime_utr;Parent=Msa0726170-mRNA-1
chr5_1 CDS 26666923 26667268 26666923 ID=Msa0726170-mRNA-1:cds;Parent=Msa0726170-mRNA-1
chr5_1 CDS 26664391 26664490 26664391 ID=Msa0726170-mRNA-1:cds;Parent=Msa0726170-mRNA-1
chr5_1 CDS 26664175 26664310 26664175 ID=Msa0726170-mRNA-1:cds;Parent=Msa0726170-mRNA-1
chr5_1 CDS 26663701 26663787 26663701 ID=Msa0726170-mRNA-1:cds;Parent=Msa0726170-mRNA-1
chr5_1 CDS 26663476 26663613 26663476 ID=Msa0726170-mRNA-1:cds;Parent=Msa0726170-mRNA-1
chr5_1 three_prime_UTR 26663253 26663475 26663253 ID=Msa0726170-mRNA-1:three_prime_utr;Parent=Msa0726170-mRNA-1
Gene Sequence

>Msa0726170

ATGGATTCTCTCCCTTCAGTTTCACCTTCCATCGCTCTCCCTCCCACCAACCCTTTCCGTCGCCACACCCGCCGCCTCTCTCTCTTCTCTCGCCATCTGCCCCCGAGACTCATCTCTACACCTCACTTCCGAACAAGGAGGAGGAGAAAGGAAGTATCGTGCAACGTCGTCGGCGGCGGCGGCAGAGGAGGAGATGACAGTGGAAACGAGGAGGAGGTGGAGAAAGCGCTTCACATGGATGGAAAAATTCCTGGAAACTCGGATGAGTTCTTGAAGCAAGTTTCCTCCCGTGCTTATGACATGCGTCGGAATCTTCATCAGTCCTTTGATTCTAGCAGCTATGATGTTTTAGATGACAACCCTTGGAGAGAAACTTCAAAGCCTGTGTATGTACTCACCCAAAAGGAAAACCAATTGTGCACGATGAAAACCCGGAGAAATATAAGCGAAGTTGAAAGAGAGCTTGGCCTATTGTTTTCAAAAGGAAGCAACCGAAGAGCTGCAATAGAAAATCAGTCTAAACAAGCAAGGGGAGGGACAAAATTTCCAATGCAAGTAGAAGATATTAGAGATGGAGTGCTGGTATTTGAAGATGAAAACGAGGCAGCTAAGTATTGTGACTTGCTGCAAGGAGGGTGTGAGGGTGTTGCCGAGATAGACGCCTCATCGATATTTGATCTTTGCAAGAAAATGAGGGCTCTTGCAGTTCTATTCCGCCGAGGTAGGACACCTCCTGTACCCGAAAGCCTTAAGCTTAATCTGCGAGCTCGAAAACGGTCCCTTGAAGATCAAGATGATCTGATATGA

Protein sequence

>Msa0726170

MDSLPSVSPSIALPPTNPFRRHTRRLSLFSRHLPPRLISTPHFRTRRRRKEVSCNVVGGGGRGGDDSGNEEEVEKALHMDGKIPGNSDEFLKQVSSRAYDMRRNLHQSFDSSSYDVLDDNPWRETSKPVYVLTQKENQLCTMKTRRNISEVERELGLLFSKGSNRRAAIENQSKQARGGTKFPMQVEDIRDGVLVFEDENEAAKYCDLLQGGCEGVAEIDASSIFDLCKKMRALAVLFRRGRTPPVPESLKLNLRARKRSLEDQDDLI*