AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0807870


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0807870 MtrunA17_Chr5g0422641 94.611 334 18 0 1 334 1 334 0.0 648
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0807870 AT1G29700.2 64.242 330 112 3 6 331 16 343 4.77e-152 431
Msa0807870 AT1G29700.1 64.242 330 112 3 6 331 16 343 4.77e-152 431

Find 95 sgRNAs with CRISPR-Local

Find 528 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTGGCAACGTCCTGAAAA+TGG 0.170652 5_3:+31143386 Msa0807870:CDS
TATATTGGTCGATCCAATTT+TGG 0.183865 5_3:+31140844 Msa0807870:CDS
CTTCTCCTTCTCTAATATTA+TGG 0.183966 5_3:+31147849 Msa0807870:three_prime_UTR
GAAATATTTAAAGAACTTTC+AGG 0.185096 5_3:+31140913 Msa0807870:CDS
GTTGCTATAACTCTAATATT+TGG 0.185604 5_3:-31141953 None:intergenic
CCCAAGTTTACATTGGTTTC+AGG 0.186906 5_3:+31143670 Msa0807870:CDS
ACTGATCTTTGGTTCAATTT+AGG 0.198021 5_3:+31147510 Msa0807870:exon
TCCAAGTTACCCACCAAAAT+TGG 0.233715 5_3:-31140857 None:intergenic
TCCTAATGCCAAGAGCTTAT+TGG 0.234051 5_3:+31141976 Msa0807870:CDS
GAAACAGTTTCTTCTTCTTA+TGG 0.241215 5_3:-31140451 None:intergenic
CTTCAAACTCACATATTTAG+AGG 0.268843 5_3:+31140689 Msa0807870:CDS
TTTCTGAGAAAAGGGGTTTA+GGG 0.278605 5_3:-31141927 None:intergenic
ATTTCTGAGAAAAGGGGTTT+AGG 0.280321 5_3:-31141928 None:intergenic
ATGAGTAAGCAATCAATTTC+AGG 0.284844 5_3:-31141869 None:intergenic
AATACTTGGAGATGAGAAAA+TGG 0.296385 5_3:-31140478 None:intergenic
TTGGTGGGTAACTTGGATTT+TGG 0.315233 5_3:+31140863 Msa0807870:CDS
AATTTCAGCAAACTGATCTT+TGG 0.316782 5_3:+31147499 Msa0807870:exon
TGGTTCTAAGGTCGGGATTA+AGG 0.323414 5_3:+31143337 Msa0807870:CDS
TTTGGAAATTTCTGAGAAAA+GGG 0.340438 5_3:-31141935 None:intergenic
ATTTGGAAATTTCTGAGAAA+AGG 0.375893 5_3:-31141936 None:intergenic
TGTGGATGGAGTAAATATAT+TGG 0.385728 5_3:+31140829 Msa0807870:CDS
TGAAACAAAGTATGGTTCTA+AGG 0.388130 5_3:+31143325 Msa0807870:CDS
TTGTACATATGAAGGTTTGA+TGG 0.389860 5_3:-31147715 None:intergenic
TCCTGAAACCAATGTAAACT+TGG 0.393744 5_3:-31143671 None:intergenic
TCTGAAATTGAAACAAAGTA+TGG 0.394662 5_3:+31143317 Msa0807870:CDS
TCCAATAAGCTCTTGGCATT+AGG 0.399654 5_3:-31141977 None:intergenic
GCTACAGCAGGACCAGTTCT+TGG 0.401867 5_3:+31143359 Msa0807870:CDS
TCAGGTTACATATATAGAAC+CGG 0.415718 5_3:+31143286 Msa0807870:intron
GGCTCTACAACCTTCGCATC+TGG 0.417892 5_3:-31147455 None:intergenic
TTGACAGTTTGTACACCGTT+TGG 0.459660 5_3:-31147649 None:intergenic
TGCCAAGGTGGTCCAAGAAC+TGG 0.462182 5_3:-31143371 None:intergenic
TTTGGATATAGGGAAATAGT+TGG 0.464321 5_3:+31140798 Msa0807870:intron
CTCTAAATATGTGAGTTTGA+AGG 0.465267 5_3:-31140688 None:intergenic
ATACTTGGAGATGAGAAAAT+GGG 0.466628 5_3:-31140477 None:intergenic
AAAAGAAAGTTCTAAGGACT+TGG 0.472284 5_3:+31147803 Msa0807870:three_prime_UTR
GAAATTTCAACTGCTACTCC+TGG 0.475084 5_3:-31147482 None:intergenic
TCAATTTCAGAGCTTTGTCC+CGG 0.476552 5_3:-31143305 None:intergenic
CTTGGCAACGTCCTGAAAAT+GGG 0.478519 5_3:+31143387 Msa0807870:CDS
TAATCAAAGCTTCATTGAAA+AGG 0.478940 5_3:+31143603 Msa0807870:CDS
CAAAGTATGGTTCTAAGGTC+GGG 0.481065 5_3:+31143330 Msa0807870:CDS
ATGGAGATCTAGATAGCAAA+GGG 0.486190 5_3:+31144300 Msa0807870:CDS
TGAACTGAGCAAGATCAGTT+TGG 0.488599 5_3:-31147559 None:intergenic
TGCAAGCATAATTGCGTCAG+AGG 0.490375 5_3:+31144328 Msa0807870:CDS
ACTGATCTTGCTCAGTTCAC+CGG 0.491710 5_3:+31147563 Msa0807870:three_prime_UTR
TGTAATGTAGCCATGGTTGA+TGG 0.493497 5_3:-31140387 None:intergenic
GTTTCTTCTTCTTATGGAGT+GGG 0.497926 5_3:-31140445 None:intergenic
GTTCATAGTAGAGAGACAAT+TGG 0.505320 5_3:-31143567 None:intergenic
GTTTAATACAGTTGAAGTTG+TGG 0.506989 5_3:-31140514 None:intergenic
AAGAGGGTCCAATAAGCTCT+TGG 0.508291 5_3:-31141984 None:intergenic
ACAAAGTATGGTTCTAAGGT+CGG 0.511035 5_3:+31143329 Msa0807870:CDS
AAAGCTTCATTGAAAAGGAA+AGG 0.512699 5_3:+31143608 Msa0807870:CDS
CTTTGTTGACAGGTTTGTTG+TGG 0.514877 5_3:+31144268 Msa0807870:intron
TGATTGAGGATATTCATTAG+TGG 0.518398 5_3:+31147935 Msa0807870:three_prime_UTR
TATAGGGAAATAGTTGGCTA+TGG 0.520516 5_3:+31140804 Msa0807870:intron
GAAATTGAAGTGCCAATACT+TGG 0.525456 5_3:-31140492 None:intergenic
TTACAATATTGCAGTTCTCT+CGG 0.525800 5_3:+31140405 Msa0807870:CDS
AGGGGTTTAGGGTCTTCAAA+TGG 0.527721 5_3:-31141916 None:intergenic
CTTTAACTATAGACATGGCT+CGG 0.530631 5_3:-31147596 None:intergenic
GGGAACAATAGAATCATTCA+AGG 0.534072 5_3:+31144349 Msa0807870:CDS
TCAATCATAGAAATAGAAAA+CGG 0.534635 5_3:-31147919 None:intergenic
AGAAAGTTCTAAGGACTTGG+AGG 0.540484 5_3:+31147806 Msa0807870:three_prime_UTR
CAGGTTACATATATAGAACC+GGG 0.541280 5_3:+31143287 Msa0807870:intron
TCTTCTTCTTATGGAGTGGG+AGG 0.541840 5_3:-31140442 None:intergenic
AAGCTTCATTGAAAAGGAAA+GGG 0.544883 5_3:+31143609 Msa0807870:CDS
ATCTTTGGTTCAATTTAGGA+AGG 0.544892 5_3:+31147514 Msa0807870:exon
AGTTTCTTCTTCTTATGGAG+TGG 0.545900 5_3:-31140446 None:intergenic
GTTATTGCCCAAGTTTACAT+TGG 0.547513 5_3:+31143663 Msa0807870:CDS
TCAACTGCTACTCCTGGGAT+AGG 0.549422 5_3:-31147476 None:intergenic
GTCGGGATTAAGGCTACAGC+AGG 0.552354 5_3:+31143347 Msa0807870:CDS
ATATGCTGAACTAAACCAAA+CGG 0.553858 5_3:+31147634 Msa0807870:three_prime_UTR
ATGGCTCGGAAACATAAAAC+CGG 0.559700 5_3:-31147582 None:intergenic
CAGTTCTTTAACTATAGACA+TGG 0.561239 5_3:-31147601 None:intergenic
TTGGAAATTTCTGAGAAAAG+GGG 0.563832 5_3:-31141934 None:intergenic
TCAAATGGCAATGATCATCA+AGG 0.573455 5_3:-31141901 None:intergenic
AAATTTCAACTGCTACTCCT+GGG 0.574268 5_3:-31147481 None:intergenic
CATAATATTAGAGAAGGAGA+AGG 0.577228 5_3:-31147848 None:intergenic
AAGGTTGTAGAGCCTATCCC+AGG 0.579841 5_3:+31147464 Msa0807870:CDS
AAATAGTTGGCTATGGAATG+TGG 0.580878 5_3:+31140811 Msa0807870:CDS
TCAAACCATAATATTAGAGA+AGG 0.586350 5_3:-31147854 None:intergenic
AAAAGAATTACCAGATGCGA+AGG 0.586937 5_3:+31147445 Msa0807870:CDS
GACCAGTTCTTGGACCACCT+TGG 0.590705 5_3:+31143369 Msa0807870:CDS
CCTGAAACCAATGTAAACTT+GGG 0.591271 5_3:-31143670 None:intergenic
AGTTGGCTATGGAATGTGGA+TGG 0.592713 5_3:+31140815 Msa0807870:CDS
TAGAAGCATCATATAACCAA+GGG 0.597074 5_3:-31140889 None:intergenic
AATGGAGATCTAGATAGCAA+AGG 0.598922 5_3:+31144299 Msa0807870:CDS
TTAGAAGCATCATATAACCA+AGG 0.613794 5_3:-31140890 None:intergenic
ATGTAGCCATGGTTGATGGA+TGG 0.618553 5_3:-31140383 None:intergenic
TTTGAAGGAATCAGTTACAG+TGG 0.619601 5_3:-31140673 None:intergenic
GCAATATTGTAATGTAGCCA+TGG 0.624553 5_3:-31140394 None:intergenic
GACGCAATTATGCTTGCAAG+AGG 0.627426 5_3:-31144323 None:intergenic
AGCCATGGTTGATGGATGGA+TGG 0.628746 5_3:-31140379 None:intergenic
GCAAGCATAATTGCGTCAGA+GGG 0.632506 5_3:+31144329 Msa0807870:CDS
GTCCATCCATCCATCAACCA+TGG 0.667256 5_3:+31140377 Msa0807870:exon
TACTTGGAGATGAGAAAATG+GGG 0.673434 5_3:-31140476 None:intergenic
CTTTGATTATAGACACAGTG+AGG 0.677549 5_3:-31143589 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAAAATGATTTTTTGAT+GGG - chr5_3:31140261-31140280 None:intergenic 10.0%
!!! TATGAGTATTATATTTTTAT+TGG + chr5_3:31142745-31142764 Msa0807870:intron 10.0%
!!! ATGAGTATTATATTTTTATT+GGG + chr5_3:31142746-31142765 Msa0807870:intron 10.0%
!!! AAAATGAATTCTTTTTAAAA+AGG - chr5_3:31144097-31144116 None:intergenic 10.0%
!!! TTTTAAAAAGAATTCATTTT+TGG + chr5_3:31144097-31144116 Msa0807870:intron 10.0%
!! CAAAGTTTAAAAAAAAAAAT+CGG - chr5_3:31144750-31144769 None:intergenic 10.0%
!! TTATAAAAATAGGTAAAAAT+GGG + chr5_3:31147112-31147131 Msa0807870:intron 10.0%
!!! CAAAAAAAATGATTTTTTGA+TGG - chr5_3:31140262-31140281 None:intergenic 15.0%
!! TCTATTAAAATTCTAACATT+TGG - chr5_3:31141548-31141567 None:intergenic 15.0%
!!! TTTTTAATGATATAATGATC+TGG + chr5_3:31142217-31142236 Msa0807870:intron 15.0%
!! TATTTGCATATATAAATCTT+GGG + chr5_3:31143843-31143862 Msa0807870:intron 15.0%
!!! TTTCTATGAAATATTACTTT+TGG - chr5_3:31143873-31143892 None:intergenic 15.0%
!! TCATTAATTGTTTCAATTAA+TGG + chr5_3:31143925-31143944 Msa0807870:intron 15.0%
!!! AAAATGAATTCTTTGAAAAA+AGG - chr5_3:31144027-31144046 None:intergenic 15.0%
!!! TTTTTCAAAGAATTCATTTT+TGG + chr5_3:31144027-31144046 Msa0807870:intron 15.0%
!!! AGCATAAAAATTTAATTTCT+TGG + chr5_3:31145993-31146012 Msa0807870:intron 15.0%
!! ATTATTATATTTGTGTGAAA+TGG + chr5_3:31146997-31147016 Msa0807870:intron 15.0%
!! CTTATAAAAATAGGTAAAAA+TGG + chr5_3:31147111-31147130 Msa0807870:intron 15.0%
!!! ATTTTGCTTCTAATTATTTG+TGG - chr5_3:31140308-31140327 None:intergenic 20.0%
!!! TTACATTTGTTTTGTTGTTT+TGG + chr5_3:31140780-31140799 Msa0807870:intron 20.0%
!! GAAATATTTAAAGAACTTTC+AGG + chr5_3:31140913-31140932 Msa0807870:CDS 20.0%
!! TTCAATGTAATTATATGTGT+CGG + chr5_3:31141275-31141294 Msa0807870:intron 20.0%
!!! GGATTTTCATTTATAGAATT+TGG + chr5_3:31141521-31141540 Msa0807870:intron 20.0%
!!! TTAAAAATATTTTATGCCTC+AGG + chr5_3:31141605-31141624 Msa0807870:intron 20.0%
!! TACTTACATTAGTAAAAAGA+GGG - chr5_3:31142003-31142022 None:intergenic 20.0%
!! ATACTTACATTAGTAAAAAG+AGG - chr5_3:31142004-31142023 None:intergenic 20.0%
!! ATGTACATTCTTTCTATATT+TGG + chr5_3:31142022-31142041 Msa0807870:intron 20.0%
!! AAGATGACAGAATATATAAT+GGG + chr5_3:31142317-31142336 Msa0807870:intron 20.0%
!!! TTGTTGAATATCTATTTTGA+TGG - chr5_3:31142465-31142484 None:intergenic 20.0%
!!! ATATTTGTTTTGATAGAGAT+AGG - chr5_3:31142556-31142575 None:intergenic 20.0%
!! AAACAAATATTCAATTTCCT+TGG + chr5_3:31142566-31142585 Msa0807870:intron 20.0%
!!! TGATATTTAAAATTGACAAG+TGG - chr5_3:31142789-31142808 None:intergenic 20.0%
!! TAAGCACAACTAAATAATAA+GGG - chr5_3:31143088-31143107 None:intergenic 20.0%
!! ATAAGCACAACTAAATAATA+AGG - chr5_3:31143089-31143108 None:intergenic 20.0%
!!! ACCAAATTTCATATATTTTC+AGG + chr5_3:31143268-31143287 Msa0807870:intron 20.0%
!! ACCTGAAAATATATGAAATT+TGG - chr5_3:31143272-31143291 None:intergenic 20.0%
!!! AGTATTTTGCAATGATTTTT+TGG - chr5_3:31143807-31143826 None:intergenic 20.0%
!! GTATTTGCATATATAAATCT+TGG + chr5_3:31143842-31143861 Msa0807870:intron 20.0%
!!! TTTTGATCCTTTTCTTATAA+AGG + chr5_3:31144183-31144202 Msa0807870:intron 20.0%
!! AGTTTAAAAAAAAAAATCGG+TGG - chr5_3:31144747-31144766 None:intergenic 20.0%
!!! TAAGAAGAAATAATTTGCTT+GGG - chr5_3:31144873-31144892 None:intergenic 20.0%
!!! TTAAGAAGAAATAATTTGCT+TGG - chr5_3:31144874-31144893 None:intergenic 20.0%
!! AAAAGTAAATTATTACCACA+TGG + chr5_3:31145743-31145762 Msa0807870:intron 20.0%
!! AAATGTATCAAAAGTAGAAT+GGG - chr5_3:31146088-31146107 None:intergenic 20.0%
!! AAAATGTATCAAAAGTAGAA+TGG - chr5_3:31146089-31146108 None:intergenic 20.0%
!! AAAAAAAAAAAGTCAAGAGT+TGG + chr5_3:31146193-31146212 Msa0807870:intron 20.0%
!! AAAAAAAAAAGTCAAGAGTT+GGG + chr5_3:31146194-31146213 Msa0807870:intron 20.0%
!!! ATGAAAATCTTGTAATTTTG+AGG - chr5_3:31146407-31146426 None:intergenic 20.0%
!! CAAATCACAAGTAATAAAAT+AGG + chr5_3:31146494-31146513 Msa0807870:intron 20.0%
!! ACAAGTAATAAAATAGGTTT+AGG + chr5_3:31146500-31146519 Msa0807870:intron 20.0%
!! ATCAGGACTTATTTAATTAT+TGG + chr5_3:31147267-31147286 Msa0807870:intron 20.0%
!!! TTGAATTTTTGTACATATGA+AGG - chr5_3:31147726-31147745 None:intergenic 20.0%
!! TCAATCATAGAAATAGAAAA+CGG - chr5_3:31147922-31147941 None:intergenic 20.0%
!!! TGATTGTATTATCCTTTTTA+TGG + chr5_3:31147985-31148004 Msa0807870:three_prime_UTR 20.0%
!!! GATTGTATTATCCTTTTTAT+GGG + chr5_3:31147986-31148005 Msa0807870:three_prime_UTR 20.0%
!!! TGTTTTGTTGTTTTGGATAT+AGG + chr5_3:31140787-31140806 Msa0807870:intron 25.0%
!!! GTTTTGTTGTTTTGGATATA+GGG + chr5_3:31140788-31140807 Msa0807870:intron 25.0%
! AATCCAAAATCTTAAGACAT+TGG + chr5_3:31141111-31141130 Msa0807870:intron 25.0%
! ATCCAAAATCTTAAGACATT+GGG + chr5_3:31141112-31141131 Msa0807870:intron 25.0%
!!! TTAATGGATTTTGATTGTGT+GGG + chr5_3:31141707-31141726 Msa0807870:intron 25.0%
! ACAAAGAGTTAATCACTATA+CGG - chr5_3:31141776-31141795 None:intergenic 25.0%
! AACTCTTTGTTAAAACTACA+AGG + chr5_3:31141786-31141805 Msa0807870:intron 25.0%
!! TTTGGAAATTTCTGAGAAAA+GGG - chr5_3:31141938-31141957 None:intergenic 25.0%
!! ATTTGGAAATTTCTGAGAAA+AGG - chr5_3:31141939-31141958 None:intergenic 25.0%
! GTTGCTATAACTCTAATATT+TGG - chr5_3:31141956-31141975 None:intergenic 25.0%
! TCTGTAGTATGTATTTGAAT+TGG + chr5_3:31142073-31142092 Msa0807870:intron 25.0%
! GAAGATGACAGAATATATAA+TGG + chr5_3:31142316-31142335 Msa0807870:intron 25.0%
! ACAGAAAATATGAGCTATAT+TGG + chr5_3:31142637-31142656 Msa0807870:intron 25.0%
! CAGAAAATATGAGCTATATT+GGG + chr5_3:31142638-31142657 Msa0807870:intron 25.0%
! AGAAAATATGAGCTATATTG+GGG + chr5_3:31142639-31142658 Msa0807870:intron 25.0%
!! AGATTTTATCAAATGTGCAA+AGG + chr5_3:31142718-31142737 Msa0807870:intron 25.0%
! CACAAAAAACACTATTATTG+TGG - chr5_3:31142935-31142954 None:intergenic 25.0%
!!! AATAGTGTTTTTTGTGCATT+CGG + chr5_3:31142939-31142958 Msa0807870:intron 25.0%
! AACAAAACCAATATGAAGAT+GGG - chr5_3:31143118-31143137 None:intergenic 25.0%
!! TCTGAAATTGAAACAAAGTA+TGG + chr5_3:31143317-31143336 Msa0807870:CDS 25.0%
! ATTTGAACGAATAGCAAATA+AGG - chr5_3:31143479-31143498 None:intergenic 25.0%
! TAATCAAAGCTTCATTGAAA+AGG + chr5_3:31143603-31143622 Msa0807870:CDS 25.0%
! CAGGTAAACAAAAATTTACT+TGG - chr5_3:31143734-31143753 None:intergenic 25.0%
!! ATTTAAGATCGATTAACCAA+TGG + chr5_3:31143900-31143919 Msa0807870:intron 25.0%
!!! TCATTTTTGGTAATAGTTTG+TGG + chr5_3:31144040-31144059 Msa0807870:intron 25.0%
!! GGTAATTTTCCTAATATTCT+TGG + chr5_3:31144118-31144137 Msa0807870:intron 25.0%
! TCCTAATATTCTTGGTTATT+TGG + chr5_3:31144126-31144145 Msa0807870:intron 25.0%
! TCCAAATAACCAAGAATATT+AGG - chr5_3:31144130-31144149 None:intergenic 25.0%
!! ATTTCAACTAAAGCTCATTT+TGG + chr5_3:31144157-31144176 Msa0807870:intron 25.0%
! CAGAAAACCTTTATAAGAAA+AGG - chr5_3:31144193-31144212 None:intergenic 25.0%
! AGATATACATAAAAGAACTG+TGG - chr5_3:31144235-31144254 None:intergenic 25.0%
!! TGTGTTATGTCTGTTATTTA+TGG + chr5_3:31144408-31144427 Msa0807870:intron 25.0%
!!! TAGTTGGTTTAATTGCTTTT+GGG - chr5_3:31144781-31144800 None:intergenic 25.0%
!!! AAGAAGAAATAATTTGCTTG+GGG - chr5_3:31144872-31144891 None:intergenic 25.0%
! TCTTAAAATTCATGCTCTAT+CGG + chr5_3:31144888-31144907 Msa0807870:intron 25.0%
! TGTTCTTGTTCAAAAAAAGA+TGG + chr5_3:31144917-31144936 Msa0807870:intron 25.0%
! ATGGAATACTTAAATAGCTT+GGG - chr5_3:31145405-31145424 None:intergenic 25.0%
! AATGGAATACTTAAATAGCT+TGG - chr5_3:31145406-31145425 None:intergenic 25.0%
! TTATAGTATAGAATGCTCAA+TGG - chr5_3:31145424-31145443 None:intergenic 25.0%
! AATGCTTCATTTAGTATTTC+CGG + chr5_3:31145526-31145545 Msa0807870:intron 25.0%
!! TTAACTACATAGAAAGCATA+GGG - chr5_3:31145725-31145744 None:intergenic 25.0%
!! TTTAACTACATAGAAAGCAT+AGG - chr5_3:31145726-31145745 None:intergenic 25.0%
! TATTACAGTAAATTACCATG+TGG - chr5_3:31145761-31145780 None:intergenic 25.0%
! TGTAATAGAAACATAGTCTA+GGG + chr5_3:31145774-31145793 Msa0807870:intron 25.0%
! TAATCTTAATCTGTTCAGAA+TGG + chr5_3:31145961-31145980 Msa0807870:intron 25.0%
!! AATTTAATTTCTTGGTGAGT+TGG + chr5_3:31146001-31146020 Msa0807870:intron 25.0%
! AAAAAAAAAGTCAAGAGTTG+GGG + chr5_3:31146195-31146214 Msa0807870:intron 25.0%
!!! TAGTTTTAACACTCTAAAAG+TGG - chr5_3:31146251-31146270 None:intergenic 25.0%
! TATAAAAAGAGCAATGGATA+GGG + chr5_3:31146300-31146319 Msa0807870:intron 25.0%
! GTTTCAAACTTAGATAACAT+TGG + chr5_3:31146542-31146561 Msa0807870:intron 25.0%
!!! GTAGGAAGTATTCAAATAAA+AGG - chr5_3:31146587-31146606 None:intergenic 25.0%
!! ATAAGGAAAGTATAATTGGT+AGG - chr5_3:31146605-31146624 None:intergenic 25.0%
!! AGGAATAAGGAAAGTATAAT+TGG - chr5_3:31146609-31146628 None:intergenic 25.0%
! TGCCTAAATTAAACTTTGTA+AGG + chr5_3:31146731-31146750 Msa0807870:intron 25.0%
!! AGCCTTACAAAGTTTAATTT+AGG - chr5_3:31146736-31146755 None:intergenic 25.0%
! GATTGAAGCCAAATAATAAA+GGG - chr5_3:31146790-31146809 None:intergenic 25.0%
! TGATTGAAGCCAAATAATAA+AGG - chr5_3:31146791-31146810 None:intergenic 25.0%
! ACATAAATGCTTATGTAATC+AGG + chr5_3:31147250-31147269 Msa0807870:intron 25.0%
! TCTCTTAATTATGATTTGAG+TGG + chr5_3:31147327-31147346 Msa0807870:intron 25.0%
! TAAGTGATTCTATCTTCAAA+TGG + chr5_3:31147399-31147418 Msa0807870:intron 25.0%
! TACACAAAAAGAAAGTTCTA+AGG + chr5_3:31147797-31147816 Msa0807870:three_prime_UTR 25.0%
! TCAAACCATAATATTAGAGA+AGG - chr5_3:31147857-31147876 None:intergenic 25.0%
!!! TGTTCTGAAACTACTTTTTA+TGG + chr5_3:31147878-31147897 Msa0807870:three_prime_UTR 25.0%
!!! GTTCTGAAACTACTTTTTAT+GGG + chr5_3:31147879-31147898 Msa0807870:three_prime_UTR 25.0%
!!! GTTTTCTATTTCTATGATTG+AGG + chr5_3:31147921-31147940 Msa0807870:three_prime_UTR 25.0%
TTACAATATTGCAGTTCTCT+CGG + chr5_3:31140405-31140424 Msa0807870:CDS 30.0%
GAAACAGTTTCTTCTTCTTA+TGG - chr5_3:31140454-31140473 None:intergenic 30.0%
ATACTTGGAGATGAGAAAAT+GGG - chr5_3:31140480-31140499 None:intergenic 30.0%
AATACTTGGAGATGAGAAAA+TGG - chr5_3:31140481-31140500 None:intergenic 30.0%
! ATTTTCTCATCTCCAAGTAT+TGG + chr5_3:31140480-31140499 Msa0807870:CDS 30.0%
GTTTAATACAGTTGAAGTTG+TGG - chr5_3:31140517-31140536 None:intergenic 30.0%
!! CTGTGTTTTATTCTCAGATT+AGG + chr5_3:31140612-31140631 Msa0807870:intron 30.0%
CTCTAAATATGTGAGTTTGA+AGG - chr5_3:31140691-31140710 None:intergenic 30.0%
CTTCAAACTCACATATTTAG+AGG + chr5_3:31140689-31140708 Msa0807870:CDS 30.0%
AAACTCACATATTTAGAGGT+TGG + chr5_3:31140693-31140712 Msa0807870:intron 30.0%
! ACATATTTAGAGGTTGGTTA+TGG + chr5_3:31140699-31140718 Msa0807870:intron 30.0%
TTTGGATATAGGGAAATAGT+TGG + chr5_3:31140798-31140817 Msa0807870:intron 30.0%
TGTGGATGGAGTAAATATAT+TGG + chr5_3:31140829-31140848 Msa0807870:CDS 30.0%
! TATATTGGTCGATCCAATTT+TGG + chr5_3:31140844-31140863 Msa0807870:CDS 30.0%
!! TAGAAGCATCATATAACCAA+GGG - chr5_3:31140892-31140911 None:intergenic 30.0%
!! TTAGAAGCATCATATAACCA+AGG - chr5_3:31140893-31140912 None:intergenic 30.0%
!!! AGGTATGTTTTGACTTTTGA+TGG + chr5_3:31140933-31140952 Msa0807870:intron 30.0%
TGGATACTATTAGTTCCTTA+TGG + chr5_3:31140953-31140972 Msa0807870:intron 30.0%
! AACCCAATGTCTTAAGATTT+TGG - chr5_3:31141117-31141136 None:intergenic 30.0%
TCTCAAATTATTAGCAGTGT+CGG - chr5_3:31141243-31141262 None:intergenic 30.0%
ACGCTGAATCAAAAATTGAA+AGG + chr5_3:31141436-31141455 Msa0807870:intron 30.0%
! TACAATTTAGTTCATGTGCT+AGG + chr5_3:31141500-31141519 Msa0807870:intron 30.0%
CGGGTTTGAAAGAAAATATA+TGG + chr5_3:31141665-31141684 Msa0807870:intron 30.0%
CAATCAAAATCCATTAACCT+GGG - chr5_3:31141704-31141723 None:intergenic 30.0%
ACAATCAAAATCCATTAACC+TGG - chr5_3:31141705-31141724 None:intergenic 30.0%
!!! GTTAATGGATTTTGATTGTG+TGG + chr5_3:31141706-31141725 Msa0807870:intron 30.0%
CAAAGAGTTAATCACTATAC+GGG - chr5_3:31141775-31141794 None:intergenic 30.0%
ATGAGTAAGCAATCAATTTC+AGG - chr5_3:31141872-31141891 None:intergenic 30.0%
! TTGGAAATTTCTGAGAAAAG+GGG - chr5_3:31141937-31141956 None:intergenic 30.0%
ATTGGAATGATGCAATGATT+TGG + chr5_3:31142091-31142110 Msa0807870:intron 30.0%
!! CAATGATTTGGTTGTGTATT+TGG + chr5_3:31142103-31142122 Msa0807870:intron 30.0%
!! AAGATTGACTGATTTTGAGA+GGG + chr5_3:31142354-31142373 Msa0807870:intron 30.0%
ATATATGACAACTGTGTTGT+TGG - chr5_3:31142533-31142552 None:intergenic 30.0%
TAAAATTCCATGTAGTCTGT+AGG + chr5_3:31142681-31142700 Msa0807870:intron 30.0%
AAATGACAAATATCTGGTCA+TGG - chr5_3:31142817-31142836 None:intergenic 30.0%
CAGTCAAAATGACAAATATC+TGG - chr5_3:31142823-31142842 None:intergenic 30.0%
GAGTTTCACAAAGATAAAAG+TGG + chr5_3:31142887-31142906 Msa0807870:intron 30.0%
AGCATATCAAACATCATTGT+TGG - chr5_3:31142998-31143017 None:intergenic 30.0%
ACAAAACCAATATGAAGATG+GGG - chr5_3:31143117-31143136 None:intergenic 30.0%
CAACAAAACCAATATGAAGA+TGG - chr5_3:31143119-31143138 None:intergenic 30.0%
ATTGCATGCTAAATATTGAC+AGG - chr5_3:31143173-31143192 None:intergenic 30.0%
TCAGGTTACATATATAGAAC+CGG + chr5_3:31143286-31143305 Msa0807870:intron 30.0%
! TGAAACAAAGTATGGTTCTA+AGG + chr5_3:31143325-31143344 Msa0807870:CDS 30.0%
AAAGCTTCATTGAAAAGGAA+AGG + chr5_3:31143608-31143627 Msa0807870:CDS 30.0%
AAGCTTCATTGAAAAGGAAA+GGG + chr5_3:31143609-31143628 Msa0807870:CDS 30.0%
!!! GTGTTTTTGTGTGTTTTTTC+AGG - chr5_3:31143753-31143772 None:intergenic 30.0%
AAAACACTACTCAATGCAAA+TGG + chr5_3:31143766-31143785 Msa0807870:intron 30.0%
TTGCATATATAAATCTTGGG+AGG + chr5_3:31143846-31143865 Msa0807870:intron 30.0%
TGCATATATAAATCTTGGGA+GGG + chr5_3:31143847-31143866 Msa0807870:intron 30.0%
GAAACAATTAATGACTCCAT+TGG - chr5_3:31143919-31143938 None:intergenic 30.0%
! GAATATCATCAACTAGTTTG+TGG + chr5_3:31143970-31143989 Msa0807870:intron 30.0%
! TTTGTTGTGGCAATGAAAAA+TGG + chr5_3:31144281-31144300 Msa0807870:CDS 30.0%
AAGCAACTTATCTGCATAAT+TGG - chr5_3:31144386-31144405 None:intergenic 30.0%
AAAGAAAGTGACGTTTCTTA+TGG - chr5_3:31144434-31144453 None:intergenic 30.0%
CAAAAGGTTACGATTACTTA+TGG - chr5_3:31144459-31144478 None:intergenic 30.0%
! CATAAGTAATCGTAACCTTT+TGG + chr5_3:31144457-31144476 Msa0807870:intron 30.0%
TTGATGGAAGAAAGAAAGAA+AGG - chr5_3:31144692-31144711 None:intergenic 30.0%
AAAAAAATCGGTGGAATCAA+AGG - chr5_3:31144738-31144757 None:intergenic 30.0%
!! GTAGTTGGTTTAATTGCTTT+TGG - chr5_3:31144782-31144801 None:intergenic 30.0%
!! AGAAGAAATAATTTGCTTGG+GGG - chr5_3:31144871-31144890 None:intergenic 30.0%
TGAGCATTCTATACTATAAG+TGG + chr5_3:31145425-31145444 Msa0807870:intron 30.0%
GAGCATTCTATACTATAAGT+GGG + chr5_3:31145426-31145445 Msa0807870:intron 30.0%
AAAAAGTGATACCTACGAAA+GGG - chr5_3:31145556-31145575 None:intergenic 30.0%
AATGTTCGTAGACTACTTAA+GGG - chr5_3:31145623-31145642 None:intergenic 30.0%
CTGTAATAGAAACATAGTCT+AGG + chr5_3:31145773-31145792 Msa0807870:intron 30.0%
GTAATAGAAACATAGTCTAG+GGG + chr5_3:31145775-31145794 Msa0807870:intron 30.0%
TAAGACTAGTGAATCTACTT+GGG - chr5_3:31145874-31145893 None:intergenic 30.0%
ATAAGACTAGTGAATCTACT+TGG - chr5_3:31145875-31145894 None:intergenic 30.0%
AACACTGAACTTTGTATTGT+CGG - chr5_3:31145942-31145961 None:intergenic 30.0%
GAAGTGTATAAAAAGAGCAA+TGG + chr5_3:31146294-31146313 Msa0807870:intron 30.0%
GTATAAAAAGAGCAATGGAT+AGG + chr5_3:31146299-31146318 Msa0807870:intron 30.0%
! GTGTAAAATGAGATACGTTT+TGG - chr5_3:31146438-31146457 None:intergenic 30.0%
! AAATAGGTTTAGGACATAAG+AGG + chr5_3:31146510-31146529 Msa0807870:intron 30.0%
! AATAGGTTTAGGACATAAGA+GGG + chr5_3:31146511-31146530 Msa0807870:intron 30.0%
ATATGCAAAATGACAGTTGA+AGG - chr5_3:31146828-31146847 None:intergenic 30.0%
!!! TTCAACTGTCATTTTGCATA+TGG + chr5_3:31146827-31146846 Msa0807870:intron 30.0%
! ATTTTTATAAGCTCTCCCAA+AGG - chr5_3:31147102-31147121 None:intergenic 30.0%
TTGGGAGAGCTTATAAAAAT+AGG + chr5_3:31147102-31147121 Msa0807870:intron 30.0%
AATTTCAGCAAACTGATCTT+TGG + chr5_3:31147499-31147518 Msa0807870:exon 30.0%
! ACTGATCTTTGGTTCAATTT+AGG + chr5_3:31147510-31147529 Msa0807870:exon 30.0%
! ATCTTTGGTTCAATTTAGGA+AGG + chr5_3:31147514-31147533 Msa0807870:exon 30.0%
CAGTTCTTTAACTATAGACA+TGG - chr5_3:31147604-31147623 None:intergenic 30.0%
ATATGCTGAACTAAACCAAA+CGG + chr5_3:31147634-31147653 Msa0807870:three_prime_UTR 30.0%
TTGTACATATGAAGGTTTGA+TGG - chr5_3:31147718-31147737 None:intergenic 30.0%
!! AAAAGAAAGTTCTAAGGACT+TGG + chr5_3:31147803-31147822 Msa0807870:three_prime_UTR 30.0%
CATAATATTAGAGAAGGAGA+AGG - chr5_3:31147851-31147870 None:intergenic 30.0%
CTTCTCCTTCTCTAATATTA+TGG + chr5_3:31147849-31147868 Msa0807870:three_prime_UTR 30.0%
TGATTGAGGATATTCATTAG+TGG + chr5_3:31147935-31147954 Msa0807870:three_prime_UTR 30.0%
! TCATTAGTGGAATGATTTTG+AGG + chr5_3:31147948-31147967 Msa0807870:three_prime_UTR 30.0%
GCAATATTGTAATGTAGCCA+TGG - chr5_3:31140397-31140416 None:intergenic 35.0%
GTTTCTTCTTCTTATGGAGT+GGG - chr5_3:31140448-31140467 None:intergenic 35.0%
AGTTTCTTCTTCTTATGGAG+TGG - chr5_3:31140449-31140468 None:intergenic 35.0%
TACTTGGAGATGAGAAAATG+GGG - chr5_3:31140479-31140498 None:intergenic 35.0%
! GAAATTGAAGTGCCAATACT+TGG - chr5_3:31140495-31140514 None:intergenic 35.0%
TTTGAAGGAATCAGTTACAG+TGG - chr5_3:31140676-31140695 None:intergenic 35.0%
TATAGGGAAATAGTTGGCTA+TGG + chr5_3:31140804-31140823 Msa0807870:intron 35.0%
AAATAGTTGGCTATGGAATG+TGG + chr5_3:31140811-31140830 Msa0807870:CDS 35.0%
! TCCTTATGGATTGTGTCTTT+AGG + chr5_3:31140967-31140986 Msa0807870:intron 35.0%
! CCTTATGGATTGTGTCTTTA+GGG + chr5_3:31140968-31140987 Msa0807870:intron 35.0%
TAATTGCTCTTGGCCTAATT+AGG - chr5_3:31141065-31141084 None:intergenic 35.0%
TAATTAGGCCAAGAGCAATT+AGG + chr5_3:31141064-31141083 Msa0807870:intron 35.0%
ATCTTAAGACATTGGGTTCA+TGG + chr5_3:31141119-31141138 Msa0807870:intron 35.0%
TCTTAAGACATTGGGTTCAT+GGG + chr5_3:31141120-31141139 Msa0807870:intron 35.0%
GACTCTATGAAGCATGTTTA+CGG + chr5_3:31141182-31141201 Msa0807870:intron 35.0%
TATGAAGCAAAAACACTCCT+CGG - chr5_3:31141330-31141349 None:intergenic 35.0%
AAAATCCATTAACCTGGGTT+GGG - chr5_3:31141699-31141718 None:intergenic 35.0%
TCAAATGGCAATGATCATCA+AGG - chr5_3:31141904-31141923 None:intergenic 35.0%
! TTTCTGAGAAAAGGGGTTTA+GGG - chr5_3:31141930-31141949 None:intergenic 35.0%
! ATTTCTGAGAAAAGGGGTTT+AGG - chr5_3:31141931-31141950 None:intergenic 35.0%
ATACAGCTTTCACAACCAAA+CGG - chr5_3:31142052-31142071 None:intergenic 35.0%
!! TCAAAACGAGTTTTTCGACT+TGG - chr5_3:31142149-31142168 None:intergenic 35.0%
ATCCAATCTACCAAGTTTGA+TGG + chr5_3:31142172-31142191 Msa0807870:intron 35.0%
TACCATCAAACTTGGTAGAT+TGG - chr5_3:31142177-31142196 None:intergenic 35.0%
CATGATTTGATTAGTGAGTG+TGG + chr5_3:31142251-31142270 Msa0807870:intron 35.0%
!! GAAGATTGACTGATTTTGAG+AGG + chr5_3:31142353-31142372 Msa0807870:intron 35.0%
! TTGTAACCTTCTCTTTTGGT+AGG + chr5_3:31142429-31142448 Msa0807870:intron 35.0%
AAAGGACAGAGAAAAAACCA+AGG - chr5_3:31142586-31142605 None:intergenic 35.0%
!!! TGGTTTTTTCTCTGTCCTTT+TGG + chr5_3:31142586-31142605 Msa0807870:intron 35.0%
ATATGAGCTATATTGGGGTT+TGG + chr5_3:31142644-31142663 Msa0807870:intron 35.0%
TATGAGCTATATTGGGGTTT+GGG + chr5_3:31142645-31142664 Msa0807870:intron 35.0%
TTTCAAACCTACAGACTACA+TGG - chr5_3:31142691-31142710 None:intergenic 35.0%
TGGAGAAATGTGTGTTCAAA+GGG - chr5_3:31142978-31142997 None:intergenic 35.0%
TTGGAGAAATGTGTGTTCAA+AGG - chr5_3:31142979-31142998 None:intergenic 35.0%
GTGCACTGTTAATGAATCAA+TGG - chr5_3:31143035-31143054 None:intergenic 35.0%
AAAACCAATATGAAGATGGG+GGG - chr5_3:31143115-31143134 None:intergenic 35.0%
CAAAACCAATATGAAGATGG+GGG - chr5_3:31143116-31143135 None:intergenic 35.0%
ATTCAGTATACATGAAGCAC+TGG + chr5_3:31143199-31143218 Msa0807870:intron 35.0%
! TTCAGTATACATGAAGCACT+GGG + chr5_3:31143200-31143219 Msa0807870:intron 35.0%
CAGGTTACATATATAGAACC+GGG + chr5_3:31143287-31143306 Msa0807870:intron 35.0%
!! ACAAAGTATGGTTCTAAGGT+CGG + chr5_3:31143329-31143348 Msa0807870:CDS 35.0%
! AACAGAGTTTACCCATTTTC+AGG - chr5_3:31143401-31143420 None:intergenic 35.0%
TGAACGAATAGCAAATAAGG+TGG - chr5_3:31143476-31143495 None:intergenic 35.0%
GTTCATAGTAGAGAGACAAT+TGG - chr5_3:31143570-31143589 None:intergenic 35.0%
CTTTGATTATAGACACAGTG+AGG - chr5_3:31143592-31143611 None:intergenic 35.0%
GTTATTGCCCAAGTTTACAT+TGG + chr5_3:31143663-31143682 Msa0807870:CDS 35.0%
CCTGAAACCAATGTAAACTT+GGG - chr5_3:31143673-31143692 None:intergenic 35.0%
TCCTGAAACCAATGTAAACT+TGG - chr5_3:31143674-31143693 None:intergenic 35.0%
ATGCAAATGGTTCATTCCAA+AGG + chr5_3:31143779-31143798 Msa0807870:intron 35.0%
TGCAAATGGTTCATTCCAAA+GGG + chr5_3:31143780-31143799 Msa0807870:intron 35.0%
!!! CAATGATTTTTTGGACCCTT+TGG - chr5_3:31143798-31143817 None:intergenic 35.0%
!! AGTTGATGATATTCGAAGAC+TGG - chr5_3:31143964-31143983 None:intergenic 35.0%
! GGTTCAACTTAAGCTCATTT+TGG + chr5_3:31143991-31144010 Msa0807870:intron 35.0%
! GGTTCAACTTAAGCTCATTT+TGG + chr5_3:31143991-31144010 Msa0807870:intron 35.0%
AATGGAGATCTAGATAGCAA+AGG + chr5_3:31144299-31144318 Msa0807870:CDS 35.0%
ATGGAGATCTAGATAGCAAA+GGG + chr5_3:31144300-31144319 Msa0807870:CDS 35.0%
GGGAACAATAGAATCATTCA+AGG + chr5_3:31144349-31144368 Msa0807870:CDS 35.0%
!! AATCGTAACCTTTTGGCTAT+TGG + chr5_3:31144464-31144483 Msa0807870:intron 35.0%
!! ATCGTAACCTTTTGGCTATT+GGG + chr5_3:31144465-31144484 Msa0807870:intron 35.0%
AGAGCAAAATTCTTCCTATC+AGG - chr5_3:31144506-31144525 None:intergenic 35.0%
AGAAAGAAAGAGTAGAAGGA+CGG - chr5_3:31144715-31144734 None:intergenic 35.0%
AAGGAGAAAGAAAGAGTAGA+AGG - chr5_3:31144719-31144738 None:intergenic 35.0%
AGATGTGATTGCTTTGTAGT+TGG - chr5_3:31144797-31144816 None:intergenic 35.0%
AACGCATATGCATTAACCAA+CGG - chr5_3:31144977-31144996 None:intergenic 35.0%
TGAAGATAGAATGGAAGAGA+TGG - chr5_3:31145323-31145342 None:intergenic 35.0%
CAAGCTAGTTGAAGATAGAA+TGG - chr5_3:31145332-31145351 None:intergenic 35.0%
TAGCTTGATCATAGACACTT+GGG + chr5_3:31145345-31145364 Msa0807870:intron 35.0%
GGTTTGTAAGATTCCTCTAT+AGG + chr5_3:31145366-31145385 Msa0807870:intron 35.0%
TTCTTATCAGGTTCCTATAG+AGG - chr5_3:31145382-31145401 None:intergenic 35.0%
AAATAGCTTGGGTTCTTATC+AGG - chr5_3:31145394-31145413 None:intergenic 35.0%
!! CTAAATGAAGCATTGTAGAG+TGG - chr5_3:31145520-31145539 None:intergenic 35.0%
CAAAAAGTGATACCTACGAA+AGG - chr5_3:31145557-31145576 None:intergenic 35.0%
GAATGTTCGTAGACTACTTA+AGG - chr5_3:31145624-31145643 None:intergenic 35.0%
!! TTAACTTCATGGGAGTACTA+CGG - chr5_3:31145646-31145665 None:intergenic 35.0%
TGAAACGAAGTAGACATTGA+TGG + chr5_3:31145674-31145693 Msa0807870:intron 35.0%
TACCATGTCAATGGTGTAAA+TGG + chr5_3:31145839-31145858 Msa0807870:intron 35.0%
CTTAATCTGTTCAGAATGGT+CGG + chr5_3:31145965-31145984 Msa0807870:intron 35.0%
TGGGAACATATGAGATACAT+GGG - chr5_3:31146069-31146088 None:intergenic 35.0%
ATGGGAACATATGAGATACA+TGG - chr5_3:31146070-31146089 None:intergenic 35.0%
TGTCTGCATTCTATCATCAT+AGG - chr5_3:31146476-31146495 None:intergenic 35.0%
! ATAGGTTTAGGACATAAGAG+GGG + chr5_3:31146512-31146531 Msa0807870:intron 35.0%
AGACATAAAACAGTCACTTG+GGG - chr5_3:31146653-31146672 None:intergenic 35.0%
GAGACATAAAACAGTCACTT+GGG - chr5_3:31146654-31146673 None:intergenic 35.0%
TGTTGTGAGTGAATACTCAT+GGG - chr5_3:31146683-31146702 None:intergenic 35.0%
ATGTTGTGAGTGAATACTCA+TGG - chr5_3:31146684-31146703 None:intergenic 35.0%
! TTGTAAGGCTTTTCTTGCTT+CGG + chr5_3:31146746-31146765 Msa0807870:intron 35.0%
GTCAGTCTCCCTTTATTATT+TGG + chr5_3:31146779-31146798 Msa0807870:intron 35.0%
!!! TGTCATTTTGCATATGGCTA+AGG + chr5_3:31146833-31146852 Msa0807870:intron 35.0%
ACAGATGTAAACAACCTACA+AGG - chr5_3:31146864-31146883 None:intergenic 35.0%
TTGTTTACATCTGTCCTTCA+TGG + chr5_3:31146870-31146889 Msa0807870:intron 35.0%
TGTTTACATCTGTCCTTCAT+GGG + chr5_3:31146871-31146890 Msa0807870:intron 35.0%
TTCATAGCTAAGAATGCATG+AGG - chr5_3:31147220-31147239 None:intergenic 35.0%
! TTTCATTAAGAGAGCGTGTT+TGG - chr5_3:31147302-31147321 None:intergenic 35.0%
AGATAGAATAGAGAGTCAGA+GGG - chr5_3:31147365-31147384 None:intergenic 35.0%
TAGATAGAATAGAGAGTCAG+AGG - chr5_3:31147366-31147385 None:intergenic 35.0%
CTTCAAATGGTTATCAATGC+AGG + chr5_3:31147412-31147431 Msa0807870:intron 35.0%
AAAAGAATTACCAGATGCGA+AGG + chr5_3:31147445-31147464 Msa0807870:CDS 35.0%
AAATTTCAACTGCTACTCCT+GGG - chr5_3:31147484-31147503 None:intergenic 35.0%
CTTTAACTATAGACATGGCT+CGG - chr5_3:31147599-31147618 None:intergenic 35.0%
TGTAATGTAGCCATGGTTGA+TGG - chr5_3:31140390-31140409 None:intergenic 40.0%
! GTGAGAGAAACTTACTGACT+TGG - chr5_3:31140550-31140569 None:intergenic 40.0%
! ATTGGTCGATCCAATTTTGG+TGG + chr5_3:31140847-31140866 Msa0807870:CDS 40.0%
!! TTGGTCGATCCAATTTTGGT+GGG + chr5_3:31140848-31140867 Msa0807870:CDS 40.0%
!! TCCAATTTTGGTGGGTAACT+TGG + chr5_3:31140856-31140875 Msa0807870:CDS 40.0%
TCCAAGTTACCCACCAAAAT+TGG - chr5_3:31140860-31140879 None:intergenic 40.0%
!! TTGGTGGGTAACTTGGATTT+TGG + chr5_3:31140863-31140882 Msa0807870:CDS 40.0%
!!! ACTTGGATTTTGGAATCCCT+TGG + chr5_3:31140873-31140892 Msa0807870:CDS 40.0%
CCCTAAAGACACAATCCATA+AGG - chr5_3:31140971-31140990 None:intergenic 40.0%
!! TGTGTCTTTAGGGTTGTTCA+TGG + chr5_3:31140978-31140997 Msa0807870:intron 40.0%
!! GTGTCTTTAGGGTTGTTCAT+GGG + chr5_3:31140979-31140998 Msa0807870:intron 40.0%
TGTTAATCTCATGACCCAAC+CGG + chr5_3:31141006-31141025 Msa0807870:intron 40.0%
CATGGGCTCTATACTAATCA+AGG + chr5_3:31141137-31141156 Msa0807870:intron 40.0%
TGCTTCATAGAGTCTCACAT+TGG - chr5_3:31141176-31141195 None:intergenic 40.0%
ATGAAGCATGTTTACGGACA+CGG + chr5_3:31141188-31141207 Msa0807870:intron 40.0%
!!! GAGGAGTGTTTTTGCTTCAT+AGG + chr5_3:31141329-31141348 Msa0807870:intron 40.0%
TGTTCGAATCAAACCACTTC+CGG - chr5_3:31141399-31141418 None:intergenic 40.0%
CAAAATCCATTAACCTGGGT+TGG - chr5_3:31141700-31141719 None:intergenic 40.0%
AATCACTATACGGGTCTACA+CGG - chr5_3:31141766-31141785 None:intergenic 40.0%
TCCTAATGCCAAGAGCTTAT+TGG + chr5_3:31141976-31141995 Msa0807870:CDS 40.0%
TCCAATAAGCTCTTGGCATT+AGG - chr5_3:31141980-31141999 None:intergenic 40.0%
TCTATATTTGGTCCTCCGTT+TGG + chr5_3:31142034-31142053 Msa0807870:intron 40.0%
GCTACATGTACCATCAAACT+TGG - chr5_3:31142185-31142204 None:intergenic 40.0%
! GTTTGATGGTACATGTAGCA+TGG + chr5_3:31142186-31142205 Msa0807870:intron 40.0%
GTGGTGTAACTGAACTATCT+CGG + chr5_3:31142270-31142289 Msa0807870:intron 40.0%
TGGTGTAACTGAACTATCTC+GGG + chr5_3:31142271-31142290 Msa0807870:intron 40.0%
! GTCGTTGTAACCTTCTCTTT+TGG + chr5_3:31142425-31142444 Msa0807870:intron 40.0%
GACTGTAGAACTTGACCAAA+AGG - chr5_3:31142604-31142623 None:intergenic 40.0%
ATGTGTGTTCAAAGGGTGAA+AGG - chr5_3:31142971-31142990 None:intergenic 40.0%
! TTTTCCCCCCATCTTCATAT+TGG + chr5_3:31143108-31143127 Msa0807870:intron 40.0%
! TCAATTTCAGAGCTTTGTCC+CGG - chr5_3:31143308-31143327 None:intergenic 40.0%
!! CAAAGTATGGTTCTAAGGTC+GGG + chr5_3:31143330-31143349 Msa0807870:CDS 40.0%
! GGCAATAACTGTTTTACGAC+TGG - chr5_3:31143652-31143671 None:intergenic 40.0%
!! CCCAAGTTTACATTGGTTTC+AGG + chr5_3:31143670-31143689 Msa0807870:CDS 40.0%
ATCGTGATTCCTTTGTTGAC+AGG + chr5_3:31144258-31144277 Msa0807870:intron 40.0%
CACAACAAACCTGTCAACAA+AGG - chr5_3:31144270-31144289 None:intergenic 40.0%
!! CTTTGTTGACAGGTTTGTTG+TGG + chr5_3:31144268-31144287 Msa0807870:intron 40.0%
CTATCAGGTGCTCGTATATA+GGG - chr5_3:31144491-31144510 None:intergenic 40.0%
AGAAAGAAAGGCTGAAAAGC+TGG - chr5_3:31144680-31144699 None:intergenic 40.0%
ACGCATATGCATTAACCAAC+GGG - chr5_3:31144976-31144995 None:intergenic 40.0%
TATGCGTTAGTTAACTCACG+CGG + chr5_3:31144989-31145008 Msa0807870:intron 40.0%
GTCTTGGAAGTCATTCACAA+AGG - chr5_3:31145104-31145123 None:intergenic 40.0%
!! AACAGCTTGTTGTTATGGGA+GGG - chr5_3:31145132-31145151 None:intergenic 40.0%
!! CACCAACAGCTTGTTGTTAT+GGG - chr5_3:31145136-31145155 None:intergenic 40.0%
!! TCACCAACAGCTTGTTGTTA+TGG - chr5_3:31145137-31145156 None:intergenic 40.0%
!!! CAAGCTGTTGGTGATTTTAG+TGG + chr5_3:31145143-31145162 Msa0807870:intron 40.0%
AAGAGATGGAAAGCTAAGTG+CGG - chr5_3:31145309-31145328 None:intergenic 40.0%
CTAGCTTGATCATAGACACT+TGG + chr5_3:31145344-31145363 Msa0807870:intron 40.0%
!! AATGAAGCATTGTAGAGTGG+AGG - chr5_3:31145517-31145536 None:intergenic 40.0%
!!! CTTTTTGAGATACCGACAAC+CGG + chr5_3:31145570-31145589 Msa0807870:intron 40.0%
TCGTAGACTACTTAAGGGAA+TGG - chr5_3:31145618-31145637 None:intergenic 40.0%
!! CACTGTGGCTTTAACTTCAT+GGG - chr5_3:31145656-31145675 None:intergenic 40.0%
!! TCACTGTGGCTTTAACTTCA+TGG - chr5_3:31145657-31145676 None:intergenic 40.0%
ATGTCTACTTCGTTTCACTG+TGG - chr5_3:31145671-31145690 None:intergenic 40.0%
!! GTTTTGTTGAACCTCAGACA+TGG + chr5_3:31145814-31145833 Msa0807870:intron 40.0%
TGAATCTACTTGGGAGAACA+TGG - chr5_3:31145865-31145884 None:intergenic 40.0%
TATTCATGACACTCCTTGTG+CGG + chr5_3:31146121-31146140 Msa0807870:intron 40.0%
! CATTTTTGCCAACAAGGTCA+GGG - chr5_3:31146221-31146240 None:intergenic 40.0%
! ACATTTTTGCCAACAAGGTC+AGG - chr5_3:31146222-31146241 None:intergenic 40.0%
ACCTTGTTGGCAAAAATGTG+AGG + chr5_3:31146223-31146242 Msa0807870:intron 40.0%
! TCCTCACATTTTTGCCAACA+AGG - chr5_3:31146227-31146246 None:intergenic 40.0%
! TAGAGTGTTAAAACTAGCCG+TGG + chr5_3:31146255-31146274 Msa0807870:intron 40.0%
! AGAGTGTTAAAACTAGCCGT+GGG + chr5_3:31146256-31146275 Msa0807870:intron 40.0%
GAGCAAAATCTACACGACAT+TGG - chr5_3:31146344-31146363 None:intergenic 40.0%
GGGATGTATGTGAAGGAATA+AGG - chr5_3:31146622-31146641 None:intergenic 40.0%
ACAATCAGGGATGTATGTGA+AGG - chr5_3:31146629-31146648 None:intergenic 40.0%
CGAGACATAAAACAGTCACT+TGG - chr5_3:31146655-31146674 None:intergenic 40.0%
GAGTATTCACTCACAACATC+TGG + chr5_3:31146685-31146704 Msa0807870:intron 40.0%
CGTAAGTATATCTCCCATGA+AGG - chr5_3:31146887-31146906 None:intergenic 40.0%
TCTTCTGTCAACAAGTTCTG+TGG + chr5_3:31146912-31146931 Msa0807870:intron 40.0%
CATTGTACATGAGAGACACT+AGG - chr5_3:31147028-31147047 None:intergenic 40.0%
GAAATTTCAACTGCTACTCC+TGG - chr5_3:31147485-31147504 None:intergenic 40.0%
TGAACTGAGCAAGATCAGTT+TGG - chr5_3:31147562-31147581 None:intergenic 40.0%
! ATGGCTCGGAAACATAAAAC+CGG - chr5_3:31147585-31147604 None:intergenic 40.0%
TTGACAGTTTGTACACCGTT+TGG - chr5_3:31147652-31147671 None:intergenic 40.0%
!! AGAAAGTTCTAAGGACTTGG+AGG + chr5_3:31147806-31147825 Msa0807870:three_prime_UTR 40.0%
!! TGGAATGATTTTGAGGAGTG+AGG + chr5_3:31147955-31147974 Msa0807870:three_prime_UTR 40.0%
!! ATGTAGCCATGGTTGATGGA+TGG - chr5_3:31140386-31140405 None:intergenic 45.0%
TCTTCTTCTTATGGAGTGGG+AGG - chr5_3:31140445-31140464 None:intergenic 45.0%
AGTTGGCTATGGAATGTGGA+TGG + chr5_3:31140815-31140834 Msa0807870:CDS 45.0%
GTTAATCTCATGACCCAACC+GGG + chr5_3:31141007-31141026 Msa0807870:intron 45.0%
CTCACTTGCCTAATTGCTCT+TGG - chr5_3:31141075-31141094 None:intergenic 45.0%
GTCAGTATCTATGTCGTGTC+TGG - chr5_3:31141217-31141236 None:intergenic 45.0%
!! TATATGTGTCGGTGTCGTGT+TGG + chr5_3:31141286-31141305 Msa0807870:intron 45.0%
GCAAAAACACTCCTCGGATA+AGG - chr5_3:31141324-31141343 None:intergenic 45.0%
! TCGATGTTGCAGAAGTGTGA+GGG - chr5_3:31141370-31141389 None:intergenic 45.0%
TCTGCAACATCGAGTCAAAC+CGG + chr5_3:31141377-31141396 Msa0807870:intron 45.0%
! ATGGATTTTTCACCCAACCC+AGG + chr5_3:31141684-31141703 Msa0807870:intron 45.0%
TTTCACCCAACCCAGGTTAA+TGG + chr5_3:31141691-31141710 Msa0807870:intron 45.0%
! AGGGGTTTAGGGTCTTCAAA+TGG - chr5_3:31141919-31141938 None:intergenic 45.0%
AAGAGGGTCCAATAAGCTCT+TGG - chr5_3:31141987-31142006 None:intergenic 45.0%
ACTATCTCGGGTGCTTAGTA+AGG + chr5_3:31142283-31142302 Msa0807870:intron 45.0%
AGAGGGCGATCAGTAAAAAC+AGG + chr5_3:31142371-31142390 Msa0807870:intron 45.0%
GAGGGCGATCAGTAAAAACA+GGG + chr5_3:31142372-31142391 Msa0807870:intron 45.0%
CACTGTCCTACCAAAAGAGA+AGG - chr5_3:31142438-31142457 None:intergenic 45.0%
!! TGAGCCTTATTCCACGAAGT+AGG + chr5_3:31142492-31142511 Msa0807870:intron 45.0%
!! GAGCCTTATTCCACGAAGTA+GGG + chr5_3:31142493-31142512 Msa0807870:intron 45.0%
TGACCCTACTTCGTGGAATA+AGG - chr5_3:31142499-31142518 None:intergenic 45.0%
!! TGGTTCTAAGGTCGGGATTA+AGG + chr5_3:31143337-31143356 Msa0807870:CDS 45.0%
CTTGGCAACGTCCTGAAAAT+GGG + chr5_3:31143387-31143406 Msa0807870:CDS 45.0%
GACGCAATTATGCTTGCAAG+AGG - chr5_3:31144326-31144345 None:intergenic 45.0%
TGCAAGCATAATTGCGTCAG+AGG + chr5_3:31144328-31144347 Msa0807870:CDS 45.0%
GCAAGCATAATTGCGTCAGA+GGG + chr5_3:31144329-31144348 Msa0807870:CDS 45.0%
TATAGGGCCCAATAGCCAAA+AGG - chr5_3:31144475-31144494 None:intergenic 45.0%
CCTATCAGGTGCTCGTATAT+AGG - chr5_3:31144492-31144511 None:intergenic 45.0%
CCTATATACGAGCACCTGAT+AGG + chr5_3:31144489-31144508 Msa0807870:intron 45.0%
! AACATGCGCAAGGGCAATTT+TGG - chr5_3:31144565-31144584 None:intergenic 45.0%
TATGCGTGACTTAAGTAGCG+CGG + chr5_3:31144624-31144643 Msa0807870:intron 45.0%
AAGAGTAGAAGGACGGTTGA+TGG - chr5_3:31144708-31144727 None:intergenic 45.0%
!! CAACAGCTTGTTGTTATGGG+AGG - chr5_3:31145133-31145152 None:intergenic 45.0%
CTCCCATAACAACAAGCTGT+TGG + chr5_3:31145131-31145150 Msa0807870:intron 45.0%
! TTAGCACCTCATAGTACCGA+AGG + chr5_3:31145451-31145470 Msa0807870:intron 45.0%
TCAGGGACAGTGTCAATGTA+GGG - chr5_3:31145477-31145496 None:intergenic 45.0%
! TTTCATGAAGTCGGCTCTCA+GGG - chr5_3:31145494-31145513 None:intergenic 45.0%
GAGTGGAGGTTTCATGAAGT+CGG - chr5_3:31145503-31145522 None:intergenic 45.0%
CTGATCAAATGGTTCAGAGC+CGG - chr5_3:31145592-31145611 None:intergenic 45.0%
GGGAATGGATGCTGATCAAA+TGG - chr5_3:31145603-31145622 None:intergenic 45.0%
CTGAGGTTCAACAAAACCTC+AGG - chr5_3:31145811-31145830 None:intergenic 45.0%
! GACATGGAGTACCATGTCAA+TGG + chr5_3:31145830-31145849 Msa0807870:intron 45.0%
GGCCATTTACACCATTGACA+TGG - chr5_3:31145844-31145863 None:intergenic 45.0%
! CAGAGTTTGGCTTACGAGTA+AGG - chr5_3:31146036-31146055 None:intergenic 45.0%
CTTACTCGTAAGCCAAACTC+TGG + chr5_3:31146034-31146053 Msa0807870:intron 45.0%
CTCTCTCTTTCTTTGACCCA+CGG - chr5_3:31146275-31146294 None:intergenic 45.0%
AGTCACTTGGGGAACAATCA+GGG - chr5_3:31146642-31146661 None:intergenic 45.0%
GCAAAATGACAGTTGAAGGC+TGG - chr5_3:31146824-31146843 None:intergenic 45.0%
TGGCTAAGGACATTCCTTGT+AGG + chr5_3:31146847-31146866 Msa0807870:intron 45.0%
TTAGCAACTTTGCACGCCTT+TGG + chr5_3:31147083-31147102 Msa0807870:intron 45.0%
TAGCAACTTTGCACGCCTTT+GGG + chr5_3:31147084-31147103 Msa0807870:intron 45.0%
ACTGATCTTGCTCAGTTCAC+CGG + chr5_3:31147563-31147582 Msa0807870:three_prime_UTR 45.0%
!! AAATTGAAAAATAAAAAAAA+TGG - chr5_3:31141579-31141598 None:intergenic 5.0%
!! TATATATATATATATATCTT+AGG + chr5_3:31145261-31145280 Msa0807870:intron 5.0%
!! TATATAATTTATATATTCAT+TGG + chr5_3:31146160-31146179 Msa0807870:intron 5.0%
GTCCATCCATCCATCAACCA+TGG + chr5_3:31140377-31140396 Msa0807870:exon 50.0%
!! AGCCATGGTTGATGGATGGA+TGG - chr5_3:31140382-31140401 None:intergenic 50.0%
CCTAATTAGGATGATCCCCC+AGG - chr5_3:31141052-31141071 None:intergenic 50.0%
CCTGGGGGATCATCCTAATT+AGG + chr5_3:31141049-31141068 Msa0807870:intron 50.0%
! CGATGTTGCAGAAGTGTGAG+GGG - chr5_3:31141369-31141388 None:intergenic 50.0%
! CTCGATGTTGCAGAAGTGTG+AGG - chr5_3:31141371-31141390 None:intergenic 50.0%
ACATCGAGTCAAACCGGAAG+TGG + chr5_3:31141383-31141402 Msa0807870:intron 50.0%
!! ATCGCCAGGTTGGGTTGATT+CGG + chr5_3:31141645-31141664 Msa0807870:intron 50.0%
AAACCCGAATCAACCCAACC+TGG - chr5_3:31141652-31141671 None:intergenic 50.0%
TATACGGGTCTACACGGAAC+GGG - chr5_3:31141760-31141779 None:intergenic 50.0%
CTATACGGGTCTACACGGAA+CGG - chr5_3:31141761-31141780 None:intergenic 50.0%
CAGCTTTCACAACCAAACGG+AGG - chr5_3:31142049-31142068 None:intergenic 50.0%
ATGTAGCTGACCCTACTTCG+TGG - chr5_3:31142506-31142525 None:intergenic 50.0%
ACGAAGTAGGGTCAGCTACA+TGG + chr5_3:31142505-31142524 Msa0807870:intron 50.0%
!! TTTTCAGGACGTTGCCAAGG+TGG - chr5_3:31143386-31143405 None:intergenic 50.0%
!! CCATTTTCAGGACGTTGCCA+AGG - chr5_3:31143389-31143408 None:intergenic 50.0%
CCTTGGCAACGTCCTGAAAA+TGG + chr5_3:31143386-31143405 Msa0807870:CDS 50.0%
! TTTTGCGCTGCATGTGTTGC+AGG + chr5_3:31143521-31143540 Msa0807870:intron 50.0%
!! GCAATTTTGGCATGGCTGCA+GGG - chr5_3:31144552-31144571 None:intergenic 50.0%
GCGTGACTTAACATGCGCAA+GGG - chr5_3:31144574-31144593 None:intergenic 50.0%
TGCGTGACTTAACATGCGCA+AGG - chr5_3:31144575-31144594 None:intergenic 50.0%
TTGCTTGGGGGAGAACGAAA+GGG - chr5_3:31144859-31144878 None:intergenic 50.0%
TTTGCTTGGGGGAGAACGAA+AGG - chr5_3:31144860-31144879 None:intergenic 50.0%
! GTATTTTCGTCGTGGCTGCA+GGG + chr5_3:31145033-31145052 Msa0807870:intron 50.0%
GGGCAGAGCAGAAATCTGAT+AGG + chr5_3:31145075-31145094 Msa0807870:intron 50.0%
TTATGGGAGGGCAAGTGTCT+TGG - chr5_3:31145120-31145139 None:intergenic 50.0%
CAGTGTCAATGTAGGGCCTT+CGG - chr5_3:31145470-31145489 None:intergenic 50.0%
CTCAGGGACAGTGTCAATGT+AGG - chr5_3:31145478-31145497 None:intergenic 50.0%
! GTTTCATGAAGTCGGCTCTC+AGG - chr5_3:31145495-31145514 None:intergenic 50.0%
ATACCTACGAAAGGGCTGAC+CGG - chr5_3:31145548-31145567 None:intergenic 50.0%
AATGGTTCAGAGCCGGTTGT+CGG - chr5_3:31145585-31145604 None:intergenic 50.0%
TAGGGGAAATGACACTCCTG+AGG + chr5_3:31145792-31145811 Msa0807870:intron 50.0%
GACATGGTACTCCATGTCTG+AGG - chr5_3:31145828-31145847 None:intergenic 50.0%
GGGATTCTGACACCAGAGTT+TGG - chr5_3:31146049-31146068 None:intergenic 50.0%
AAAAGACTGCTCACCGCACA+AGG - chr5_3:31146137-31146156 None:intergenic 50.0%
CAGTCACTTGGGGAACAATC+AGG - chr5_3:31146643-31146662 None:intergenic 50.0%
AAGGTTGTAGAGCCTATCCC+AGG + chr5_3:31147464-31147483 Msa0807870:CDS 50.0%
TCAACTGCTACTCCTGGGAT+AGG - chr5_3:31147479-31147498 None:intergenic 50.0%
TCATGACCCAACCGGGTGTT+GGG + chr5_3:31141014-31141033 Msa0807870:intron 55.0%
TCATGACCCAACACCCGGTT+GGG - chr5_3:31141023-31141042 None:intergenic 55.0%
!! AACCGGGTGTTGGGTCATGA+GGG + chr5_3:31141023-31141042 Msa0807870:intron 55.0%
ATGGCACAAGTCGAGTCCTG+AGG - chr5_3:31141624-31141643 None:intergenic 55.0%
TTGTGCCATCATCGCCAGGT+TGG + chr5_3:31141635-31141654 Msa0807870:intron 55.0%
TGTGCCATCATCGCCAGGTT+GGG + chr5_3:31141636-31141655 Msa0807870:intron 55.0%
TCAACCCAACCTGGCGATGA+TGG - chr5_3:31141643-31141662 None:intergenic 55.0%
!! TCGCCAGGTTGGGTTGATTC+GGG + chr5_3:31141646-31141665 Msa0807870:intron 55.0%
GCGTCTGGCCAAAATTGACC+CGG + chr5_3:31141734-31141753 Msa0807870:intron 55.0%
GTCGGGATTAAGGCTACAGC+AGG + chr5_3:31143347-31143366 Msa0807870:CDS 55.0%
GCTACAGCAGGACCAGTTCT+TGG + chr5_3:31143359-31143378 Msa0807870:CDS 55.0%
GACCAGTTCTTGGACCACCT+TGG + chr5_3:31143369-31143388 Msa0807870:CDS 55.0%
TGCCAAGGTGGTCCAAGAAC+TGG - chr5_3:31143374-31143393 None:intergenic 55.0%
!! GGCAATTTTGGCATGGCTGC+AGG - chr5_3:31144553-31144572 None:intergenic 55.0%
!! GCGCAAGGGCAATTTTGGCA+TGG - chr5_3:31144560-31144579 None:intergenic 55.0%
TGCTTGGGGGAGAACGAAAG+GGG - chr5_3:31144858-31144877 None:intergenic 55.0%
GAGCGTGACTTAAGTCCCGT+TGG + chr5_3:31144958-31144977 Msa0807870:intron 55.0%
GGCGTGAGTTAACTCACGCA+GGG + chr5_3:31144645-31144664 Msa0807870:intron 55.0%
GCGTGAGTTAACTCACGCAG+GGG + chr5_3:31145011-31145030 Msa0807870:intron 55.0%
!!! ACGCAGGGGTATTTTCGTCG+TGG + chr5_3:31145025-31145044 Msa0807870:intron 55.0%
! GGTATTTTCGTCGTGGCTGC+AGG + chr5_3:31145032-31145051 Msa0807870:intron 55.0%
GTAGGGCCTTCGGTACTATG+AGG - chr5_3:31145460-31145479 None:intergenic 55.0%
TTTCCGGTCAGCCCTTTCGT+AGG + chr5_3:31145542-31145561 Msa0807870:intron 55.0%
GGCTCTACAACCTTCGCATC+TGG - chr5_3:31147458-31147477 None:intergenic 55.0%
CTCATGACCCAACCGGGTGT+TGG + chr5_3:31141013-31141032 Msa0807870:intron 60.0%
CTCATGACCCAACACCCGGT+TGG - chr5_3:31141024-31141043 None:intergenic 60.0%
!! CAACCGGGTGTTGGGTCATG+AGG + chr5_3:31141022-31141041 Msa0807870:intron 60.0%
!! ACCGGGTGTTGGGTCATGAG+GGG + chr5_3:31141024-31141043 Msa0807870:intron 60.0%
TCCCCTCATGACCCAACACC+CGG - chr5_3:31141028-31141047 None:intergenic 60.0%
TTGGGTCATGAGGGGAGCCT+GGG + chr5_3:31141032-31141051 Msa0807870:intron 60.0%
TCCTCGGATAAGGCGTGTCC+AGG - chr5_3:31141314-31141333 None:intergenic 60.0%
CGACTTGTGCCATCATCGCC+AGG + chr5_3:31141631-31141650 Msa0807870:intron 60.0%
GATTGTGTGGGCAACGCGTC+TGG + chr5_3:31141719-31141738 Msa0807870:intron 60.0%
! GGAACGGGCCGGGTCAATTT+TGG - chr5_3:31141745-31141764 None:intergenic 60.0%
CGCGAGCAAAATGTGCTGGG+TGG - chr5_3:31144529-31144548 None:intergenic 60.0%
GGGCGCGAGCAAAATGTGCT+GGG - chr5_3:31144532-31144551 None:intergenic 60.0%
AGGGCGCGAGCAAAATGTGC+TGG - chr5_3:31144533-31144552 None:intergenic 60.0%
CGGCGTGAGTTAACTCACGC+AGG + chr5_3:31144644-31144663 Msa0807870:intron 60.0%
! AGGGCGCGAGCAAAAAGTGC+AGG + chr5_3:31145052-31145071 Msa0807870:intron 60.0%
! GGGCGCGAGCAAAAAGTGCA+GGG + chr5_3:31145053-31145072 Msa0807870:intron 60.0%
! GGCGCGAGCAAAAAGTGCAG+GGG + chr5_3:31145054-31145073 Msa0807870:intron 60.0%
! GCGCGAGCAAAAAGTGCAGG+GGG + chr5_3:31145055-31145074 Msa0807870:intron 60.0%
AGTTGGGGCCCTGACCTTGT+TGG + chr5_3:31146210-31146229 Msa0807870:intron 60.0%
GTTGGGTCATGAGGGGAGCC+TGG + chr5_3:31141031-31141050 Msa0807870:intron 65.0%
TGGGTCATGAGGGGAGCCTG+GGG + chr5_3:31141033-31141052 Msa0807870:intron 65.0%
!! GTCGGTGTCGTGTTGGTGCC+TGG + chr5_3:31141293-31141312 Msa0807870:intron 65.0%
GCCTGGACACGCCTTATCCG+AGG + chr5_3:31141310-31141329 Msa0807870:intron 65.0%
GGGTCATGAGGGGAGCCTGG+GGG + chr5_3:31141034-31141053 Msa0807870:intron 70.0%
GGGTCTACACGGAACGGGCC+GGG - chr5_3:31141755-31141774 None:intergenic 70.0%
CGGGTCTACACGGAACGGGC+CGG - chr5_3:31141756-31141775 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 31140245 31148018 31140245 ID=Msa0807870;Name=Msa0807870
chr5_3 mRNA 31140245 31148018 31140245 ID=Msa0807870-mRNA-1;Parent=Msa0807870;Name=Msa0807870-mRNA-1;_AED=0.08;_eAED=0.08;_QI=151|1|1|1|1|1|8|504|334
chr5_3 exon 31140245 31140550 31140245 ID=Msa0807870-mRNA-1:exon:10356;Parent=Msa0807870-mRNA-1
chr5_3 exon 31140629 31140710 31140629 ID=Msa0807870-mRNA-1:exon:10357;Parent=Msa0807870-mRNA-1
chr5_3 exon 31140809 31140934 31140809 ID=Msa0807870-mRNA-1:exon:10358;Parent=Msa0807870-mRNA-1
chr5_3 exon 31141857 31142015 31141857 ID=Msa0807870-mRNA-1:exon:10359;Parent=Msa0807870-mRNA-1
chr5_3 exon 31143290 31143408 31143290 ID=Msa0807870-mRNA-1:exon:10360;Parent=Msa0807870-mRNA-1
chr5_3 exon 31143543 31143734 31143543 ID=Msa0807870-mRNA-1:exon:10361;Parent=Msa0807870-mRNA-1
chr5_3 exon 31144280 31144370 31144280 ID=Msa0807870-mRNA-1:exon:10362;Parent=Msa0807870-mRNA-1
chr5_3 exon 31147434 31148018 31147434 ID=Msa0807870-mRNA-1:exon:10363;Parent=Msa0807870-mRNA-1
chr5_3 five_prime_UTR 31140245 31140395 31140245 ID=Msa0807870-mRNA-1:five_prime_utr;Parent=Msa0807870-mRNA-1
chr5_3 CDS 31140396 31140550 31140396 ID=Msa0807870-mRNA-1:cds;Parent=Msa0807870-mRNA-1
chr5_3 CDS 31140629 31140710 31140629 ID=Msa0807870-mRNA-1:cds;Parent=Msa0807870-mRNA-1
chr5_3 CDS 31140809 31140934 31140809 ID=Msa0807870-mRNA-1:cds;Parent=Msa0807870-mRNA-1
chr5_3 CDS 31141857 31142015 31141857 ID=Msa0807870-mRNA-1:cds;Parent=Msa0807870-mRNA-1
chr5_3 CDS 31143290 31143408 31143290 ID=Msa0807870-mRNA-1:cds;Parent=Msa0807870-mRNA-1
chr5_3 CDS 31143543 31143734 31143543 ID=Msa0807870-mRNA-1:cds;Parent=Msa0807870-mRNA-1
chr5_3 CDS 31144280 31144370 31144280 ID=Msa0807870-mRNA-1:cds;Parent=Msa0807870-mRNA-1
chr5_3 CDS 31147434 31147514 31147434 ID=Msa0807870-mRNA-1:cds;Parent=Msa0807870-mRNA-1
chr5_3 three_prime_UTR 31147515 31148018 31147515 ID=Msa0807870-mRNA-1:three_prime_utr;Parent=Msa0807870-mRNA-1
Gene Sequence

>Msa0807870

ATGGCTACATTACAATATTGCAGTTCTCTCGGTTTTCTCAACAAAACCTCCCACTCCATAAGAAGAAGAAACTGTTTCAACCCCATTTTCTCATCTCCAAGTATTGGCACTTCAATTTCCACAACTTCAACTGTATTAAACACTAAAATTTCCAAATTAGGTTGTACTGTTTCTGCTGACAACGCTGTTGTGTCGAATTCCACTGTAACTGATTCCTTCAAACTCACATATTTAGAGGGAAATAGTTGGCTATGGAATGTGGATGGAGTAAATATATTGGTCGATCCAATTTTGGTGGGTAACTTGGATTTTGGAATCCCTTGGTTATATGATGCTTCTAAGAAATATTTAAAGAACTTTCAGCTCAGTGATCTTCCTGAAATTGATTGCTTACTCATTACTCAAAGCCTTGATGATCATTGCCATTTGAAGACCCTAAACCCCTTTTCTCAGAAATTTCCAAATATTAGAGTTATAGCAACTCCTAATGCCAAGAGCTTATTGGACCCTCTTTTTACTAATGTTACATATATAGAACCGGGACAAAGCTCTGAAATTGAAACAAAGTATGGTTCTAAGGTCGGGATTAAGGCTACAGCAGGACCAGTTCTTGGACCACCTTGGCAACGTCCTGAAAATGGGTATCTTGTTACGTCTTCGCAAGTCCAATTGTCTCTCTACTATGAACCTCACTGTGTCTATAATCAAAGCTTCATTGAAAAGGAAAGGGCAGATATTGTGATCACACCAGTCGTAAAACAGTTATTGCCCAAGTTTACATTGGTTTCAGGACAAGAAGATGCAGTAAAACTTGCAAAGCTGCTGCAAGCCAAGTTTGTTGTGGCAATGAAAAATGGAGATCTAGATAGCAAAGGGCCTCTTGCAAGCATAATTGCGTCAGAGGGAACAATAGAATCATTCAAGGAGCTTTTATCAAAAGAATTACCAGATGCGAAGGTTGTAGAGCCTATCCCAGGAGTAGCAGTTGAAATTTCAGCAAACTGA

Protein sequence

>Msa0807870

MATLQYCSSLGFLNKTSHSIRRRNCFNPIFSSPSIGTSISTTSTVLNTKISKLGCTVSADNAVVSNSTVTDSFKLTYLEGNSWLWNVDGVNILVDPILVGNLDFGIPWLYDASKKYLKNFQLSDLPEIDCLLITQSLDDHCHLKTLNPFSQKFPNIRVIATPNAKSLLDPLFTNVTYIEPGQSSEIETKYGSKVGIKATAGPVLGPPWQRPENGYLVTSSQVQLSLYYEPHCVYNQSFIEKERADIVITPVVKQLLPKFTLVSGQEDAVKLAKLLQAKFVVAMKNGDLDSKGPLASIIASEGTIESFKELLSKELPDAKVVEPIPGVAVEISAN*