AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1055520


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1055520 MtrunA17_Chr7g0227131 90.560 339 23 2 3 333 2 339 0.0 619
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1055520 AT3G27110.1 77.926 299 59 1 24 322 44 335 1.47e-174 488
Msa1055520 AT3G27110.2 77.926 299 59 1 24 322 44 335 1.47e-174 488
Msa1055520 AT3G27110.5 76.894 264 54 1 24 287 44 300 5.48e-151 426
Msa1055520 AT3G27110.3 74.661 221 49 1 25 245 45 258 1.23e-118 343
Msa1055520 AT3G27110.4 74.771 218 48 1 25 242 45 255 1.08e-117 340

Find 102 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGATCTTCACAACTTAA+TGG 0.245117 7_2:+30061343 Msa1055520:CDS
GCGTGATGATATTATTATTT+GGG 0.251632 7_2:-30058551 None:intergenic
GTTGATGCTGAGAGCGATTC+CGG 0.269062 7_2:+30059238 Msa1055520:CDS
AGCGTGATGATATTATTATT+TGG 0.292086 7_2:-30058552 None:intergenic
TTTGATGCCACAAGTTAGTT+TGG 0.299814 7_2:+30058352 Msa1055520:five_prime_UTR
CAACAGTTCAATGTTCTTCA+TGG 0.316034 7_2:+30063018 Msa1055520:three_prime_UTR
TCGTCACCCTGTTGATTTAG+AGG 0.320490 7_2:+30058861 Msa1055520:CDS
CCTGACAAGAGCTGAATTGC+AGG 0.321973 7_2:+30061499 Msa1055520:CDS
AGCCGGTGGATGCCCGTCTT+TGG 0.352923 7_2:+30062646 Msa1055520:CDS
TATTTATACAATGTATATAC+AGG 0.357155 7_2:-30063925 None:intergenic
GAAGTGGGAAAAGCTCTTCT+AGG 0.370728 7_2:+30059269 Msa1055520:CDS
CTCAAAGATCCGATCAATTC+GGG 0.371876 7_2:+30058753 Msa1055520:CDS
ACTAAATGTCGATGCATTCT+TGG 0.374814 7_2:+30062676 Msa1055520:CDS
CGCTTTCCTTGCTTCGCCTT+CGG 0.376023 7_2:+30058705 Msa1055520:CDS
ATAGCTAATGTATATGCATT+TGG 0.379911 7_2:-30061428 None:intergenic
AACCTTATGTACCATCCAAC+AGG 0.398313 7_2:-30062734 None:intergenic
ACTCAAAGATCCGATCAATT+CGG 0.401137 7_2:+30058752 Msa1055520:CDS
TGAAGTTGAAAGTTTGTTAC+GGG 0.401522 7_2:-30058525 None:intergenic
TTGAGTTGCCACCACCGAAC+CGG 0.403609 7_2:-30058735 None:intergenic
TTGATGCCACAAGTTAGTTT+GGG 0.408075 7_2:+30058353 Msa1055520:five_prime_UTR
CGCTGTTGGTGTGATCGAAT+AGG 0.413915 7_2:-30062960 None:intergenic
TATGCAAATATTCTAACTCT+TGG 0.420212 7_2:+30061839 Msa1055520:CDS
CTAGAAACAGTTAATTCAGC+TGG 0.426446 7_2:-30058793 None:intergenic
AACGGAGGAAGCCATGGAAA+TGG 0.429495 7_2:-30058662 None:intergenic
TAGATGAGTTTCTAACTTGT+CGG 0.430575 7_2:-30063866 None:intergenic
CCTGCAATTCAGCTCTTGTC+AGG 0.439183 7_2:-30061499 None:intergenic
TTGATGCTGAGAGCGATTCC+GGG 0.449904 7_2:+30059239 Msa1055520:CDS
GCCCTGTTGGATGGTACATA+AGG 0.450739 7_2:+30062732 Msa1055520:CDS
TTCTTGTTGCTCAAGACCCT+AGG 0.451122 7_2:+30062489 Msa1055520:CDS
CTTCGCCTTCGGCTAGAGCC+CGG 0.453136 7_2:+30058716 Msa1055520:CDS
CATGTAGTGCAATGTAGAAA+TGG 0.455745 7_2:+30063621 Msa1055520:intron
TTCTTACAATTCCATTTCCA+TGG 0.460892 7_2:+30058651 Msa1055520:exon
TTGAAGTTGAAAGTTTGTTA+CGG 0.468555 7_2:-30058526 None:intergenic
AACAATCAAAATGAATATAC+AGG 0.470412 7_2:-30063738 None:intergenic
TTTCCCACTTCTTTCAATCC+CGG 0.472945 7_2:-30059257 None:intergenic
TATTGGAGGTTTGATAGCTC+AGG 0.473708 7_2:+30062403 Msa1055520:CDS
CTAGTATGAATAACGACAAA+TGG 0.474623 7_2:-30061464 None:intergenic
TTTGTTACGGGTTGACGTAA+AGG 0.486842 7_2:-30058513 None:intergenic
ATTTCACTAGCACGTAGAAC+AGG 0.489038 7_2:-30062885 None:intergenic
CTTTGACGAACATATAGATC+AGG 0.496513 7_2:-30061398 None:intergenic
GTAATGACAGAGTTAGCTAT+TGG 0.501528 7_2:+30058322 None:intergenic
CAGGCAGAGGATGCGAAAGT+TGG 0.502736 7_2:-30062866 None:intergenic
AAAGCTGCTTCCAGCCCTGT+TGG 0.504883 7_2:+30062719 Msa1055520:CDS
GAAAGAAACGGAGGAAGCCA+TGG 0.505736 7_2:-30058668 None:intergenic
CCTTCGGCTAGAGCCCGGTT+CGG 0.507401 7_2:+30058721 Msa1055520:CDS
AGGTTTGATAGCTCAGGCTC+TGG 0.513918 7_2:+30062409 Msa1055520:CDS
TGAGTTGCCACCACCGAACC+GGG 0.520543 7_2:-30058734 None:intergenic
GCATATACATTAGCTATAAG+TGG 0.522878 7_2:+30061434 Msa1055520:CDS
GTAGAAATGGTGAAAGGTCC+AGG 0.525661 7_2:+30063634 Msa1055520:three_prime_UTR
CAAAACTATTACCTCACACC+GGG 0.528161 7_2:+30063699 Msa1055520:three_prime_UTR
AGCCAAAGACGGGCATCCAC+CGG 0.529265 7_2:-30062648 None:intergenic
TTAGTTGATCAGCCAAAGAC+GGG 0.529495 7_2:-30062658 None:intergenic
TCTTGTTGCTCAAGACCCTA+GGG 0.534728 7_2:+30062490 Msa1055520:CDS
TCATGCTCCTTGAGAACATA+GGG 0.535093 7_2:+30060685 Msa1055520:CDS
CTTGGAGCCTATACTGTACC+TGG 0.537441 7_2:+30061857 Msa1055520:CDS
TCACGTACCAGGTACAGTAT+AGG 0.538352 7_2:-30061864 None:intergenic
TGCAGGAACTGTAACAGAGC+AGG 0.540675 7_2:+30060662 Msa1055520:intron
TATGTACCATCCAACAGGGC+TGG 0.551733 7_2:-30062729 None:intergenic
TATTCTGAACCCGAATTGAT+CGG 0.554092 7_2:-30058762 None:intergenic
CGTGATGATATTATTATTTG+GGG 0.555314 7_2:-30058550 None:intergenic
CTCTAGCCGAAGGCGAAGCA+AGG 0.557684 7_2:-30058711 None:intergenic
AATGTATATGCATTTGGCAC+AGG 0.558363 7_2:-30061422 None:intergenic
CTGCTTCCAGCCCTGTTGGA+TGG 0.559469 7_2:+30062723 Msa1055520:CDS
TTTAGTTGATCAGCCAAAGA+CGG 0.561251 7_2:-30062659 None:intergenic
GAAGTGACAACCACAGCTGC+GGG 0.565611 7_2:-30058491 None:intergenic
TCTGTCCTCATGAAATTAGC+CGG 0.576759 7_2:+30062629 Msa1055520:CDS
CGTTATTCATACTAGCCTAG+TGG 0.579473 7_2:+30061472 Msa1055520:CDS
CGGATGTCCCTATGTTCTCA+AGG 0.581254 7_2:-30060692 None:intergenic
GACGAAAATCATCAGCATCA+AGG 0.584171 7_2:-30058843 None:intergenic
GCAAAACTATTACCTCACAC+CGG 0.584828 7_2:+30063698 Msa1055520:three_prime_UTR
ATCAGCATCAAGGTCACGAA+AGG 0.587461 7_2:-30058833 None:intergenic
CTCTTGTCAGGAGCTCCACT+AGG 0.594754 7_2:-30061487 None:intergenic
TGGAAGAGCAGATATTCCGC+TGG 0.599292 7_2:+30062429 Msa1055520:CDS
GGTCACCTAAAATGTGATCA+TGG 0.600504 7_2:+30061803 Msa1055520:CDS
GGTATAGATTTACTGATCCC+CGG 0.602814 7_2:-30063717 None:intergenic
TGCAATGTAGAAATGGTGAA+AGG 0.604614 7_2:+30063628 Msa1055520:three_prime_UTR
GTCATGCTCCTTGAGAACAT+AGG 0.610257 7_2:+30060684 Msa1055520:CDS
GAAAGAATTACCCGCAGCTG+TGG 0.612140 7_2:+30058481 Msa1055520:five_prime_UTR
CGAAAGGCTAAAGCAGCAGA+AGG 0.612586 7_2:-30058817 None:intergenic
CGTTCGCCCAAACTAACTTG+TGG 0.619305 7_2:-30058359 None:intergenic
GGAAGTGACAACCACAGCTG+CGG 0.621891 7_2:-30058492 None:intergenic
GTGCTAGTGAAATTGATGAA+TGG 0.627866 7_2:+30062895 Msa1055520:CDS
TTTGACGAACATATAGATCA+GGG 0.629522 7_2:-30061397 None:intergenic
ATTCCGGGATTGAAAGAAGT+GGG 0.634298 7_2:+30059254 Msa1055520:CDS
GATTCCGGGATTGAAAGAAG+TGG 0.635955 7_2:+30059253 Msa1055520:CDS
TGGCTGAGAAAAGAAAGAAA+CGG 0.639792 7_2:-30058680 None:intergenic
ATTTATACAATGTATATACA+GGG 0.641061 7_2:-30063924 None:intergenic
TGATCTTCACAACTTAATGG+CGG 0.645851 7_2:+30061346 Msa1055520:CDS
GTTAGTTTGGGCGAACGCAG+TGG 0.656986 7_2:+30058365 Msa1055520:five_prime_UTR
CTAGCACGTAGAACAGGCAG+AGG 0.658580 7_2:-30062879 None:intergenic
GTCCTCATGAAATTAGCCGG+TGG 0.659509 7_2:+30062632 Msa1055520:CDS
ATTCAGCTGCTCGAAGCCAG+CGG 0.664309 7_2:-30062445 None:intergenic
ATCCACCGGCTAATTTCATG+AGG 0.665936 7_2:-30062634 None:intergenic
TTGTGCATTTAGAACAATGT+GGG 0.674780 7_2:-30062998 None:intergenic
GGCGAAGCAAGGAAAGCGAG+TGG 0.679161 7_2:-30058700 None:intergenic
ACCTTATGTACCATCCAACA+GGG 0.698309 7_2:-30062733 None:intergenic
TTAGAGTCAAGACAACGAAG+TGG 0.699001 7_2:+30058455 Msa1055520:five_prime_UTR
CTGAGAAAAGAAAGAAACGG+AGG 0.712048 7_2:-30058677 None:intergenic
TTGACGAACATATAGATCAG+GGG 0.713505 7_2:-30061396 None:intergenic
TAAAATGTGATCATGGTGTG+TGG 0.732769 7_2:+30061810 Msa1055520:CDS
GTTGTGCATTTAGAACAATG+TGG 0.747047 7_2:-30062999 None:intergenic
AAAACTATTACCTCACACCG+GGG 0.811267 7_2:+30063700 Msa1055520:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTAATTTAATAGCA+AGG + chr7_2:30060362-30060381 Msa1055520:intron 10.0%
!!! ATTAAGTTTTTATTCAATTA+TGG + chr7_2:30063662-30063681 Msa1055520:three_prime_UTR 10.0%
!! TATAAATTCATAGAAATAAG+AGG + chr7_2:30059448-30059467 Msa1055520:intron 15.0%
!! ATAACACTTATTTATGTAAT+AGG + chr7_2:30059799-30059818 Msa1055520:intron 15.0%
!! TTATTATTAATAGAACAGTT+AGG - chr7_2:30059945-30059964 None:intergenic 15.0%
!!! TTTAAAATATTGAATAGAAG+TGG - chr7_2:30060184-30060203 None:intergenic 15.0%
!! ATGAATATAAAATCAAAACA+GGG - chr7_2:30061712-30061731 None:intergenic 15.0%
!! AATGAATATAAAATCAAAAC+AGG - chr7_2:30061713-30061732 None:intergenic 15.0%
!! TAATAATGTGTATGTATATA+AGG + chr7_2:30061908-30061927 Msa1055520:intron 15.0%
!! TAAAAACCAATTATTTGATT+GGG - chr7_2:30062225-30062244 None:intergenic 15.0%
!! ATAAAAACCAATTATTTGAT+TGG - chr7_2:30062226-30062245 None:intergenic 15.0%
!!! ACTTTTCTTGATAAAAATAA+TGG - chr7_2:30062275-30062294 None:intergenic 15.0%
!!! TAGAATATACAAGTAATTTT+TGG - chr7_2:30063838-30063857 None:intergenic 15.0%
!! ATTTATACAATGTATATACA+GGG - chr7_2:30063927-30063946 None:intergenic 15.0%
!! TATTTATACAATGTATATAC+AGG - chr7_2:30063928-30063947 None:intergenic 15.0%
!! AGCATTAACTAAAAATTGAA+CGG - chr7_2:30058984-30059003 None:intergenic 20.0%
!! TATCAGCTATAAATGATTAA+TGG - chr7_2:30059389-30059408 None:intergenic 20.0%
!! CTTATTTATGTAATAGGAAT+TGG + chr7_2:30059805-30059824 Msa1055520:intron 20.0%
!!! TCTATCCTTCTAAAAAATTT+GGG - chr7_2:30060114-30060133 None:intergenic 20.0%
!!! TTCTATCCTTCTAAAAAATT+TGG - chr7_2:30060115-30060134 None:intergenic 20.0%
!! TACTACTTCATACTTATTTA+CGG + chr7_2:30060279-30060298 Msa1055520:intron 20.0%
!!! ATGAACAAAGCTTTTATAAA+TGG - chr7_2:30060443-30060462 None:intergenic 20.0%
!!! GAAGTTTTGTGTTTTTTTTT+TGG + chr7_2:30060858-30060877 Msa1055520:intron 20.0%
!! GGAAATAACATAAAAGAAAA+CGG - chr7_2:30061049-30061068 None:intergenic 20.0%
!! GTTATACTAGTTAAGAAATT+GGG - chr7_2:30061559-30061578 None:intergenic 20.0%
!! TGTTATACTAGTTAAGAAAT+TGG - chr7_2:30061560-30061579 None:intergenic 20.0%
!!! TGATTTTATATTCATTGTTC+TGG + chr7_2:30061717-30061736 Msa1055520:intron 20.0%
!!! TCTGAAGATTTTAATTATGT+TGG + chr7_2:30061955-30061974 Msa1055520:intron 20.0%
!! TTCATAATTTATCTGTAGAT+TGG + chr7_2:30062529-30062548 Msa1055520:intron 20.0%
!!! TATAAATCTATTTTGAAACG+TGG + chr7_2:30062933-30062952 Msa1055520:CDS 20.0%
!! TGCACATATATAATATATGA+TGG + chr7_2:30063180-30063199 Msa1055520:intron 20.0%
!! TTCTATCAAGTTAATATTAC+TGG - chr7_2:30063253-30063272 None:intergenic 20.0%
!! TTAATAGCATATTATATGCA+AGG - chr7_2:30063520-30063539 None:intergenic 20.0%
!! AAAAAATTAGTGAGAAATGA+AGG - chr7_2:30063583-30063602 None:intergenic 20.0%
!! AACAATCAAAATGAATATAC+AGG - chr7_2:30063741-30063760 None:intergenic 20.0%
!!! AAGTAATTTTTGGTTTCAAA+GGG - chr7_2:30063828-30063847 None:intergenic 20.0%
!!! TTGAAGTTGAAAGTTTGTTA+CGG - chr7_2:30058529-30058548 None:intergenic 25.0%
! CGTGATGATATTATTATTTG+GGG - chr7_2:30058553-30058572 None:intergenic 25.0%
! GCGTGATGATATTATTATTT+GGG - chr7_2:30058554-30058573 None:intergenic 25.0%
! AGCGTGATGATATTATTATT+TGG - chr7_2:30058555-30058574 None:intergenic 25.0%
! AAAAAACCTCTAAATCAACA+GGG - chr7_2:30058870-30058889 None:intergenic 25.0%
!! TTTGGATTGATGATACAAAA+TGG - chr7_2:30058907-30058926 None:intergenic 25.0%
! TAATCATTTATAGCTGATAG+CGG + chr7_2:30059390-30059409 Msa1055520:intron 25.0%
! GGGTTAATTTCAGATAAATA+TGG + chr7_2:30059485-30059504 Msa1055520:intron 25.0%
! ATCGCTAAAATATTGTAAGT+TGG + chr7_2:30059587-30059606 Msa1055520:intron 25.0%
!!! AATTACTTTTTACCTAGAAG+AGG - chr7_2:30060023-30060042 None:intergenic 25.0%
! AAATTGTGTGAGTTATATCT+GGG + chr7_2:30060153-30060172 Msa1055520:intron 25.0%
! GAAGTAGTATATACCATATA+GGG - chr7_2:30060268-30060287 None:intergenic 25.0%
! TGAAGTAGTATATACCATAT+AGG - chr7_2:30060269-30060288 None:intergenic 25.0%
! AAGTTGTATGTGCTATATTT+AGG + chr7_2:30060309-30060328 Msa1055520:intron 25.0%
! TTAATTTAATAGCAAGGACT+TGG + chr7_2:30060368-30060387 Msa1055520:intron 25.0%
! TAAATGGAAAACAATAACCA+TGG - chr7_2:30060427-30060446 None:intergenic 25.0%
!! TGTTAAAGATACCTGATTTT+TGG - chr7_2:30060727-30060746 None:intergenic 25.0%
! AAAAACACAAAACTTCGAAT+AGG - chr7_2:30060854-30060873 None:intergenic 25.0%
! ACATCACATATTGTTATACA+TGG - chr7_2:30060975-30060994 None:intergenic 25.0%
! TATAGAAATACATTCGCAAT+GGG - chr7_2:30061095-30061114 None:intergenic 25.0%
! ATATAGAAATACATTCGCAA+TGG - chr7_2:30061096-30061115 None:intergenic 25.0%
! ATAAATACAGAGTAACTAGA+TGG - chr7_2:30061267-30061286 None:intergenic 25.0%
!! TAACTAATGTTGTGTTATTG+TGG + chr7_2:30061312-30061331 Msa1055520:intron 25.0%
! ATAGCTAATGTATATGCATT+TGG - chr7_2:30061431-30061450 None:intergenic 25.0%
!! ATAAGGAAAGTTTGAAATGA+TGG - chr7_2:30061673-30061692 None:intergenic 25.0%
! GTTTGACTAACAAATTGATA+AGG - chr7_2:30061690-30061709 None:intergenic 25.0%
! TATGCAAATATTCTAACTCT+TGG + chr7_2:30061839-30061858 Msa1055520:CDS 25.0%
! ACATTATAGAGAGATCTTTA+TGG - chr7_2:30062054-30062073 None:intergenic 25.0%
!! CATTTTCAAAGATGAAAACA+AGG - chr7_2:30062083-30062102 None:intergenic 25.0%
! TTAGTATCCCATTTATATGT+AGG - chr7_2:30062126-30062145 None:intergenic 25.0%
!! ATAAATGGGATACTAAGTTT+TGG + chr7_2:30062130-30062149 Msa1055520:intron 25.0%
! ATTATTTGATTGGGTAAAGA+AGG - chr7_2:30062216-30062235 None:intergenic 25.0%
! TCTTTACCCAATCAAATAAT+TGG + chr7_2:30062216-30062235 Msa1055520:intron 25.0%
! AGAATTTCTGTATCATTTGT+TGG + chr7_2:30062559-30062578 Msa1055520:intron 25.0%
! TTGCGATTCAACTTTAATAT+CGG - chr7_2:30062794-30062813 None:intergenic 25.0%
!!! GCTGAATTTTTCTTTTGATT+AGG + chr7_2:30062829-30062848 Msa1055520:intron 25.0%
!!! TTAATATTACTGGTACTGAT+GGG - chr7_2:30063243-30063262 None:intergenic 25.0%
!! ATTTCTGTTTCTCATAAGTT+CGG - chr7_2:30063278-30063297 None:intergenic 25.0%
! TACTTCACTAACTACAAATA+AGG - chr7_2:30063416-30063435 None:intergenic 25.0%
!!! TTTTTTAAGAACAACATCAC+AGG - chr7_2:30063486-30063505 None:intergenic 25.0%
! TATCAAGTATGTAATGGTAA+TGG - chr7_2:30063559-30063578 None:intergenic 25.0%
! ATAAAAACTTAATGCTTTCC+TGG - chr7_2:30063655-30063674 None:intergenic 25.0%
!!! AGTAGAATTTTGATGATAAG+AGG + chr7_2:30063781-30063800 Msa1055520:three_prime_UTR 25.0%
!!! GTAGAATTTTGATGATAAGA+GGG + chr7_2:30063782-30063801 Msa1055520:three_prime_UTR 25.0%
!!! AGTAATTTTTGGTTTCAAAG+GGG - chr7_2:30063827-30063846 None:intergenic 25.0%
!!! CAAGTAATTTTTGGTTTCAA+AGG - chr7_2:30063829-30063848 None:intergenic 25.0%
!! TGAAGTTGAAAGTTTGTTAC+GGG - chr7_2:30058528-30058547 None:intergenic 30.0%
TTCTTACAATTCCATTTCCA+TGG + chr7_2:30058651-30058670 Msa1055520:exon 30.0%
GAAAAAACCTCTAAATCAAC+AGG - chr7_2:30058871-30058890 None:intergenic 30.0%
ACAAAATGGAATCAGTTAAG+AGG - chr7_2:30058893-30058912 None:intergenic 30.0%
TAAAAGTTGCATGAGAACTA+AGG - chr7_2:30058935-30058954 None:intergenic 30.0%
! AGTTCTCATGCAACTTTTAA+AGG + chr7_2:30058936-30058955 Msa1055520:intron 30.0%
AAACTGACACTTCAGATTAA+AGG + chr7_2:30059036-30059055 Msa1055520:intron 30.0%
AGATATTCGTTACAGTTCAA+AGG - chr7_2:30059315-30059334 None:intergenic 30.0%
TAAGAGGCTGTTTAAGAAAA+TGG + chr7_2:30059464-30059483 Msa1055520:intron 30.0%
AAGAGGCTGTTTAAGAAAAT+GGG + chr7_2:30059465-30059484 Msa1055520:intron 30.0%
CATCAAAAACCTTGATTCTA+CGG + chr7_2:30059540-30059559 Msa1055520:intron 30.0%
! ATTGTAAGTTGGAGATTAGA+AGG + chr7_2:30059598-30059617 Msa1055520:intron 30.0%
!! GAACTGATAAAGTATTGATG+CGG + chr7_2:30059754-30059773 Msa1055520:intron 30.0%
CTTATACAAGAATTAGTCGA+GGG + chr7_2:30059849-30059868 Msa1055520:intron 30.0%
ATAGAACAGTTAGGTAATCT+GGG - chr7_2:30059936-30059955 None:intergenic 30.0%
AATAGAACAGTTAGGTAATC+TGG - chr7_2:30059937-30059956 None:intergenic 30.0%
ATAAATTTCCATCCTCTTCT+AGG + chr7_2:30060008-30060027 Msa1055520:intron 30.0%
CATGAGACAAACTCATATTT+AGG + chr7_2:30060060-30060079 Msa1055520:intron 30.0%
! TCATATTTAGGCCTTTTTAC+TGG + chr7_2:30060072-30060091 Msa1055520:intron 30.0%
! CATATTTAGGCCTTTTTACT+GGG + chr7_2:30060073-30060092 Msa1055520:intron 30.0%
! TCCTTCTAAAAAATTTGGGA+CGG - chr7_2:30060110-30060129 None:intergenic 30.0%
GAAATTGTGTGAGTTATATC+TGG + chr7_2:30060152-30060171 Msa1055520:intron 30.0%
TTGTATGTGCTATATTTAGG+TGG + chr7_2:30060312-30060331 Msa1055520:intron 30.0%
! AACAAATCAATTTTCCCACT+AGG - chr7_2:30060559-30060578 None:intergenic 30.0%
TCCACTCTTACTATATGAAA+AGG + chr7_2:30060887-30060906 Msa1055520:intron 30.0%
CCACTCTTACTATATGAAAA+GGG + chr7_2:30060888-30060907 Msa1055520:intron 30.0%
CAACACTTATTCTTCATTTG+AGG - chr7_2:30061070-30061089 None:intergenic 30.0%
!! GGTTTTGTCACATAATTTAC+AGG - chr7_2:30061246-30061265 None:intergenic 30.0%
CAACATTAGTTAGTTCAATG+AGG - chr7_2:30061304-30061323 None:intergenic 30.0%
TTCTGATCTTCACAACTTAA+TGG + chr7_2:30061343-30061362 Msa1055520:CDS 30.0%
TTTGACGAACATATAGATCA+GGG - chr7_2:30061400-30061419 None:intergenic 30.0%
GCATATACATTAGCTATAAG+TGG + chr7_2:30061434-30061453 Msa1055520:CDS 30.0%
CTAGTATGAATAACGACAAA+TGG - chr7_2:30061467-30061486 None:intergenic 30.0%
ATGTTACTCATACCACATAA+TGG + chr7_2:30062028-30062047 Msa1055520:intron 30.0%
ACCTAGTACCTACATATAAA+TGG + chr7_2:30062115-30062134 Msa1055520:intron 30.0%
CCTAGTACCTACATATAAAT+GGG + chr7_2:30062116-30062135 Msa1055520:intron 30.0%
ATTAAAAGTAGCACACAGAA+TGG - chr7_2:30062319-30062338 None:intergenic 30.0%
ATTAAACGAATTGGAATAGC+TGG - chr7_2:30062361-30062380 None:intergenic 30.0%
GAGGTGATTATTAAACGAAT+TGG - chr7_2:30062370-30062389 None:intergenic 30.0%
!! TAATCACCTCCATTTGTTTT+AGG + chr7_2:30062380-30062399 Msa1055520:intron 30.0%
! TTGTGCATTTAGAACAATGT+GGG - chr7_2:30063001-30063020 None:intergenic 30.0%
! GTTAATATTACTGGTACTGA+TGG - chr7_2:30063244-30063263 None:intergenic 30.0%
! TTTCTGTTTCTCATAAGTTC+GGG - chr7_2:30063277-30063296 None:intergenic 30.0%
GTGTCAAGATACAATAGATA+AGG + chr7_2:30063442-30063461 Msa1055520:intron 30.0%
GCATATTATATGCAAGGAAA+AGG - chr7_2:30063514-30063533 None:intergenic 30.0%
GAAGGTTATCAAGTATGTAA+TGG - chr7_2:30063565-30063584 None:intergenic 30.0%
! TAGATGAGTTTCTAACTTGT+CGG - chr7_2:30063869-30063888 None:intergenic 30.0%
TTTGATGCCACAAGTTAGTT+TGG + chr7_2:30058352-30058371 Msa1055520:five_prime_UTR 35.0%
! TTGATGCCACAAGTTAGTTT+GGG + chr7_2:30058353-30058372 Msa1055520:five_prime_UTR 35.0%
TGTACAGTATGTCCACATTT+GGG + chr7_2:30058388-30058407 Msa1055520:intron 35.0%
TGGCTGAGAAAAGAAAGAAA+CGG - chr7_2:30058683-30058702 None:intergenic 35.0%
ACTCAAAGATCCGATCAATT+CGG + chr7_2:30058752-30058771 Msa1055520:CDS 35.0%
TATTCTGAACCCGAATTGAT+CGG - chr7_2:30058765-30058784 None:intergenic 35.0%
CTAGAAACAGTTAATTCAGC+TGG - chr7_2:30058796-30058815 None:intergenic 35.0%
ATGAGAACTAAGGACATGTT+TGG - chr7_2:30058925-30058944 None:intergenic 35.0%
! CTTCAGATTAAAGGTGTGTT+TGG + chr7_2:30059045-30059064 Msa1055520:intron 35.0%
TAGTGCTCTGTGTTTATGTT+AGG + chr7_2:30059142-30059161 Msa1055520:intron 35.0%
AGTGCTCTGTGTTTATGTTA+GGG + chr7_2:30059143-30059162 Msa1055520:intron 35.0%
!! GAACTGTCCCTTTTTCATTT+CGG + chr7_2:30059412-30059431 Msa1055520:intron 35.0%
!! AACTGTCCCTTTTTCATTTC+GGG + chr7_2:30059413-30059432 Msa1055520:intron 35.0%
AGCAAACCCGAAATGAAAAA+GGG - chr7_2:30059422-30059441 None:intergenic 35.0%
TCAGATAAATATGGCTGATG+TGG + chr7_2:30059494-30059513 Msa1055520:intron 35.0%
!! ATTTTAGCGATACATTTCCG+TGG - chr7_2:30059578-30059597 None:intergenic 35.0%
!! AAAAGCATTATTGTACGCCA+CGG + chr7_2:30059704-30059723 Msa1055520:intron 35.0%
AGCTCACTTAAATTGCCAAT+TGG - chr7_2:30059733-30059752 None:intergenic 35.0%
! AATAGGAATTGGTGACATGT+CGG + chr7_2:30059816-30059835 Msa1055520:intron 35.0%
GACTAATTCTTGTATAAGCC+TGG - chr7_2:30059847-30059866 None:intergenic 35.0%
GCTTATACAAGAATTAGTCG+AGG + chr7_2:30059848-30059867 Msa1055520:intron 35.0%
TTTAATGCGAAGTTAACACG+TGG + chr7_2:30059905-30059924 Msa1055520:intron 35.0%
! ACTTTTTACCTAGAAGAGGA+TGG - chr7_2:30060019-30060038 None:intergenic 35.0%
! CCTTCTAAAAAATTTGGGAC+GGG - chr7_2:30060109-30060128 None:intergenic 35.0%
TAGTATATACCATATAGGGC+TGG - chr7_2:30060264-30060283 None:intergenic 35.0%
TATGTGCTATATTTAGGTGG+AGG + chr7_2:30060315-30060334 Msa1055520:intron 35.0%
ATGTGCTATATTTAGGTGGA+GGG + chr7_2:30060316-30060335 Msa1055520:intron 35.0%
! GTTCATCTGAAATGTTCATC+TGG + chr7_2:30060457-30060476 Msa1055520:intron 35.0%
GAAATGTTCATCTGGATATC+AGG + chr7_2:30060465-30060484 Msa1055520:intron 35.0%
TTCCTGCAACTCATATAAAG+GGG - chr7_2:30060650-30060669 None:intergenic 35.0%
GTTCCTGCAACTCATATAAA+GGG - chr7_2:30060651-30060670 None:intergenic 35.0%
AGTTCCTGCAACTCATATAA+AGG - chr7_2:30060652-30060671 None:intergenic 35.0%
!! ATACCTGATTTTTGGAGACA+AGG - chr7_2:30060719-30060738 None:intergenic 35.0%
GGTTGAATACTATTCAACAC+AGG - chr7_2:30060826-30060845 None:intergenic 35.0%
ACAAAACTTCGAATAGGATG+GGG - chr7_2:30060848-30060867 None:intergenic 35.0%
CACAAAACTTCGAATAGGAT+GGG - chr7_2:30060849-30060868 None:intergenic 35.0%
ACACAAAACTTCGAATAGGA+TGG - chr7_2:30060850-30060869 None:intergenic 35.0%
! CCCTTTTCATATAGTAAGAG+TGG - chr7_2:30060891-30060910 None:intergenic 35.0%
! GAGTTCACACATACTCTTTT+AGG - chr7_2:30061027-30061046 None:intergenic 35.0%
ACCTGTTACCAACTTAGTAA+TGG + chr7_2:30061149-30061168 Msa1055520:intron 35.0%
!! ACCATTACTAAGTTGGTAAC+AGG - chr7_2:30061153-30061172 None:intergenic 35.0%
CATTAGTTAGTTCAATGAGG+TGG - chr7_2:30061301-30061320 None:intergenic 35.0%
TGATCTTCACAACTTAATGG+CGG + chr7_2:30061346-30061365 Msa1055520:CDS 35.0%
TTGACGAACATATAGATCAG+GGG - chr7_2:30061399-30061418 None:intergenic 35.0%
CTTTGACGAACATATAGATC+AGG - chr7_2:30061401-30061420 None:intergenic 35.0%
AATGTATATGCATTTGGCAC+AGG - chr7_2:30061425-30061444 None:intergenic 35.0%
CTTGTTTACCATGAAGAATG+GGG - chr7_2:30061598-30061617 None:intergenic 35.0%
GCTTGTTTACCATGAAGAAT+GGG - chr7_2:30061599-30061618 None:intergenic 35.0%
TGCTTGTTTACCATGAAGAA+TGG - chr7_2:30061600-30061619 None:intergenic 35.0%
ACGTGAATGATGTTGGATAT+GGG + chr7_2:30061645-30061664 Msa1055520:intron 35.0%
!! GCCATCAATTTACTTTTCAC+AGG + chr7_2:30061760-30061779 Msa1055520:intron 35.0%
GCCTGTGAAAAGTAAATTGA+TGG - chr7_2:30061764-30061783 None:intergenic 35.0%
!! TTACTTTTCACAGGCTGTTT+TGG + chr7_2:30061769-30061788 Msa1055520:intron 35.0%
! ACACACCATGATCACATTTT+AGG - chr7_2:30061811-30061830 None:intergenic 35.0%
TAAAATGTGATCATGGTGTG+TGG + chr7_2:30061810-30061829 Msa1055520:CDS 35.0%
!!! CGTGATATGGAGCATTTTTT+AGG + chr7_2:30061882-30061901 Msa1055520:intron 35.0%
GTGTATGTATATAAGGCACA+TGG + chr7_2:30061915-30061934 Msa1055520:intron 35.0%
AGATCTTTATGGCCATTATG+TGG - chr7_2:30062043-30062062 None:intergenic 35.0%
CCCATTTATATGTAGGTACT+AGG - chr7_2:30062119-30062138 None:intergenic 35.0%
CCAATACCTAAAACAAATGG+AGG - chr7_2:30062389-30062408 None:intergenic 35.0%
!!! CCTCCATTTGTTTTAGGTAT+TGG + chr7_2:30062386-30062405 Msa1055520:intron 35.0%
CCTCCAATACCTAAAACAAA+TGG - chr7_2:30062392-30062411 None:intergenic 35.0%
!!! CCATTTGTTTTAGGTATTGG+AGG + chr7_2:30062389-30062408 Msa1055520:intron 35.0%
! TTGTTTTCCAACCCTACAAA+AGG + chr7_2:30062598-30062617 Msa1055520:intron 35.0%
! AGAGATGACAACCTTTTGTA+GGG - chr7_2:30062612-30062631 None:intergenic 35.0%
TTTAGTTGATCAGCCAAAGA+CGG - chr7_2:30062662-30062681 None:intergenic 35.0%
ACTAAATGTCGATGCATTCT+TGG + chr7_2:30062676-30062695 Msa1055520:CDS 35.0%
GTGCTAGTGAAATTGATGAA+TGG + chr7_2:30062895-30062914 Msa1055520:CDS 35.0%
! GTTGTGCATTTAGAACAATG+TGG - chr7_2:30063002-30063021 None:intergenic 35.0%
CAACAGTTCAATGTTCTTCA+TGG + chr7_2:30063018-30063037 Msa1055520:three_prime_UTR 35.0%
CATGTAGTGCAATGTAGAAA+TGG + chr7_2:30063621-30063640 Msa1055520:intron 35.0%
TGCAATGTAGAAATGGTGAA+AGG + chr7_2:30063628-30063647 Msa1055520:three_prime_UTR 35.0%
GTGTACAGTATGTCCACATT+TGG + chr7_2:30058387-30058406 Msa1055520:intron 40.0%
GATGATTCATTGCCCAAATG+TGG - chr7_2:30058403-30058422 None:intergenic 40.0%
TTAGAGTCAAGACAACGAAG+TGG + chr7_2:30058455-30058474 Msa1055520:five_prime_UTR 40.0%
! TTTGTTACGGGTTGACGTAA+AGG - chr7_2:30058516-30058535 None:intergenic 40.0%
CTGAGAAAAGAAAGAAACGG+AGG - chr7_2:30058680-30058699 None:intergenic 40.0%
CTCAAAGATCCGATCAATTC+GGG + chr7_2:30058753-30058772 Msa1055520:CDS 40.0%
GACGAAAATCATCAGCATCA+AGG - chr7_2:30058846-30058865 None:intergenic 40.0%
GTGCTCTGTGTTTATGTTAG+GGG + chr7_2:30059144-30059163 Msa1055520:intron 40.0%
ATTCCGGGATTGAAAGAAGT+GGG + chr7_2:30059254-30059273 Msa1055520:CDS 40.0%
TTTCCCACTTCTTTCAATCC+CGG - chr7_2:30059260-30059279 None:intergenic 40.0%
CAGCAAACCCGAAATGAAAA+AGG - chr7_2:30059423-30059442 None:intergenic 40.0%
TGGCTGCAATTGTAGTTGTA+TGG + chr7_2:30059514-30059533 Msa1055520:intron 40.0%
AAAAGATTACGAGTCGTGCA+TGG + chr7_2:30059648-30059667 Msa1055520:intron 40.0%
AAAGATTACGAGTCGTGCAT+GGG + chr7_2:30059649-30059668 Msa1055520:intron 40.0%
! TTTAGGCCTTTTTACTGGGA+TGG + chr7_2:30060077-30060096 Msa1055520:intron 40.0%
! TTAGGCCTTTTTACTGGGAT+GGG + chr7_2:30060078-30060097 Msa1055520:intron 40.0%
!!! CCCGTCCCAAATTTTTTAGA+AGG + chr7_2:30060106-30060125 Msa1055520:intron 40.0%
AATCAAATGCCAGCCCTATA+TGG + chr7_2:30060252-30060271 Msa1055520:intron 40.0%
TGTGCTATATTTAGGTGGAG+GGG + chr7_2:30060317-30060336 Msa1055520:intron 40.0%
! AGCTTTTGATCCAGTTACTC+AGG + chr7_2:30060612-30060631 Msa1055520:intron 40.0%
CATGTCATAACCTGAGTAAC+TGG - chr7_2:30060625-30060644 None:intergenic 40.0%
CAGTTACTCAGGTTATGACA+TGG + chr7_2:30060623-30060642 Msa1055520:intron 40.0%
TCATGCTCCTTGAGAACATA+GGG + chr7_2:30060685-30060704 Msa1055520:CDS 40.0%
!! CTGATTTTTGGAGACAAGGA+CGG - chr7_2:30060715-30060734 None:intergenic 40.0%
CAAAACTTCGAATAGGATGG+GGG - chr7_2:30060847-30060866 None:intergenic 40.0%
AGAGGAGCAAGTTAATTCAC+TGG - chr7_2:30061129-30061148 None:intergenic 40.0%
!! ACTAAGTTGGTAACAGGTAG+AGG - chr7_2:30061147-30061166 None:intergenic 40.0%
CAGAGCAACCATTACTAAGT+TGG - chr7_2:30061160-30061179 None:intergenic 40.0%
TAGTTCAATGAGGTGGCATA+AGG - chr7_2:30061294-30061313 None:intergenic 40.0%
! CGTTATTCATACTAGCCTAG+TGG + chr7_2:30061472-30061491 Msa1055520:CDS 40.0%
AGAATGGGGAGAAAACTTCT+TGG - chr7_2:30061584-30061603 None:intergenic 40.0%
! AGTTTTCTCCCCATTCTTCA+TGG + chr7_2:30061587-30061606 Msa1055520:intron 40.0%
GACTTTGACGTGAATGATGT+TGG + chr7_2:30061638-30061657 Msa1055520:intron 40.0%
GACGTGAATGATGTTGGATA+TGG + chr7_2:30061644-30061663 Msa1055520:intron 40.0%
GGTCACCTAAAATGTGATCA+TGG + chr7_2:30061803-30061822 Msa1055520:CDS 40.0%
! ACTGTTTTGTCTGACACCTA+TGG + chr7_2:30061984-30062003 Msa1055520:intron 40.0%
! TGACACCTATGGATTGAACT+GGG + chr7_2:30061995-30062014 Msa1055520:intron 40.0%
TCTTTCCCAGTTCAATCCAT+AGG - chr7_2:30062003-30062022 None:intergenic 40.0%
! TATTGGAGGTTTGATAGCTC+AGG + chr7_2:30062403-30062422 Msa1055520:CDS 40.0%
TTTGACATCAGCATACCCTA+GGG - chr7_2:30062508-30062527 None:intergenic 40.0%
! TTTTGACATCAGCATACCCT+AGG - chr7_2:30062509-30062528 None:intergenic 40.0%
! ATGACAACCTTTTGTAGGGT+TGG - chr7_2:30062608-30062627 None:intergenic 40.0%
! CAGAGATGACAACCTTTTGT+AGG - chr7_2:30062613-30062632 None:intergenic 40.0%
TCTGTCCTCATGAAATTAGC+CGG + chr7_2:30062629-30062648 Msa1055520:CDS 40.0%
TTAGTTGATCAGCCAAAGAC+GGG - chr7_2:30062661-30062680 None:intergenic 40.0%
ACCTTATGTACCATCCAACA+GGG - chr7_2:30062736-30062755 None:intergenic 40.0%
AACCTTATGTACCATCCAAC+AGG - chr7_2:30062737-30062756 None:intergenic 40.0%
ATTTCACTAGCACGTAGAAC+AGG - chr7_2:30062888-30062907 None:intergenic 40.0%
! ACTGCTAGAATTTTCGCTGT+TGG - chr7_2:30062977-30062996 None:intergenic 40.0%
GCAAAACTATTACCTCACAC+CGG + chr7_2:30063698-30063717 Msa1055520:three_prime_UTR 40.0%
CAAAACTATTACCTCACACC+GGG + chr7_2:30063699-30063718 Msa1055520:three_prime_UTR 40.0%
AAAACTATTACCTCACACCG+GGG + chr7_2:30063700-30063719 Msa1055520:three_prime_UTR 40.0%
GGTATAGATTTACTGATCCC+CGG - chr7_2:30063720-30063739 None:intergenic 40.0%
ATCAGCATCAAGGTCACGAA+AGG - chr7_2:30058836-30058855 None:intergenic 45.0%
!! TCGTCACCCTGTTGATTTAG+AGG + chr7_2:30058861-30058880 Msa1055520:CDS 45.0%
TCGTCGTACATGTATGTGTC+AGG + chr7_2:30059118-30059137 Msa1055520:intron 45.0%
GATTCCGGGATTGAAAGAAG+TGG + chr7_2:30059253-30059272 Msa1055520:CDS 45.0%
GAAGTGGGAAAAGCTCTTCT+AGG + chr7_2:30059269-30059288 Msa1055520:CDS 45.0%
TGATTGTGGCCGTAGAATCA+AGG - chr7_2:30059552-30059571 None:intergenic 45.0%
AAGATTACGAGTCGTGCATG+GGG + chr7_2:30059650-30059669 Msa1055520:intron 45.0%
AAATTGCCAATTGGCTACCG+TGG - chr7_2:30059724-30059743 None:intergenic 45.0%
TGCGAAGTTAACACGTGGTA+CGG + chr7_2:30059910-30059929 Msa1055520:intron 45.0%
! TAGGCCTTTTTACTGGGATG+GGG + chr7_2:30060079-30060098 Msa1055520:intron 45.0%
AGTACCCCATCCCAGTAAAA+AGG - chr7_2:30060086-30060105 None:intergenic 45.0%
TGTGTGACATGATTGCACCA+TGG + chr7_2:30060407-30060426 Msa1055520:intron 45.0%
TGCTTGCTTTCAGATCCTAG+TGG + chr7_2:30060541-30060560 Msa1055520:intron 45.0%
GCTTGCTTTCAGATCCTAGT+GGG + chr7_2:30060542-30060561 Msa1055520:intron 45.0%
GTCCCCTTTATATGAGTTGC+AGG + chr7_2:30060645-30060664 Msa1055520:intron 45.0%
GTCATGCTCCTTGAGAACAT+AGG + chr7_2:30060684-30060703 Msa1055520:CDS 45.0%
CGTCCTTGTCTCCAAAAATC+AGG + chr7_2:30060713-30060732 Msa1055520:CDS 45.0%
CAGGTGACATCATGCAGAAA+TGG - chr7_2:30061227-30061246 None:intergenic 45.0%
!!! GCTGTTTTGGCTCATGAGTT+GGG + chr7_2:30061782-30061801 Msa1055520:CDS 45.0%
TCACGTACCAGGTACAGTAT+AGG - chr7_2:30061867-30061886 None:intergenic 45.0%
ACTGTACCTGGTACGTGATA+TGG + chr7_2:30061869-30061888 Msa1055520:intron 45.0%
AATGCTCCATATCACGTACC+AGG - chr7_2:30061878-30061897 None:intergenic 45.0%
! CTGACACCTATGGATTGAAC+TGG + chr7_2:30061994-30062013 Msa1055520:intron 45.0%
TTCTTGTTGCTCAAGACCCT+AGG + chr7_2:30062489-30062508 Msa1055520:CDS 45.0%
TCTTGTTGCTCAAGACCCTA+GGG + chr7_2:30062490-30062509 Msa1055520:CDS 45.0%
! ATCCACCGGCTAATTTCATG+AGG - chr7_2:30062637-30062656 None:intergenic 45.0%
ATGAGACACTAGCAACGAGA+CGG - chr7_2:30063314-30063333 None:intergenic 45.0%
GTAGAAATGGTGAAAGGTCC+AGG + chr7_2:30063634-30063653 Msa1055520:three_prime_UTR 45.0%
CGTTCGCCCAAACTAACTTG+TGG - chr7_2:30058362-30058381 None:intergenic 50.0%
GAAAGAATTACCCGCAGCTG+TGG + chr7_2:30058481-30058500 Msa1055520:five_prime_UTR 50.0%
GAGAGAGAGAGAGAGAGAGA+TGG - chr7_2:30058592-30058611 None:intergenic 50.0%
AACGGAGGAAGCCATGGAAA+TGG - chr7_2:30058665-30058684 None:intergenic 50.0%
GAAAGAAACGGAGGAAGCCA+TGG - chr7_2:30058671-30058690 None:intergenic 50.0%
CGAAAGGCTAAAGCAGCAGA+AGG - chr7_2:30058820-30058839 None:intergenic 50.0%
GTTGATGCTGAGAGCGATTC+CGG + chr7_2:30059238-30059257 Msa1055520:CDS 50.0%
TTGATGCTGAGAGCGATTCC+GGG + chr7_2:30059239-30059258 Msa1055520:CDS 50.0%
CATTTCCGTGGCTGTGATTG+TGG - chr7_2:30059566-30059585 None:intergenic 50.0%
AGATTACGAGTCGTGCATGG+GGG + chr7_2:30059651-30059670 Msa1055520:intron 50.0%
TGCAGGAACTGTAACAGAGC+AGG + chr7_2:30060662-30060681 Msa1055520:intron 50.0%
CGGATGTCCCTATGTTCTCA+AGG - chr7_2:30060695-30060714 None:intergenic 50.0%
CCTGCAATTCAGCTCTTGTC+AGG - chr7_2:30061502-30061521 None:intergenic 50.0%
CCTGACAAGAGCTGAATTGC+AGG + chr7_2:30061499-30061518 Msa1055520:CDS 50.0%
!!! GGCTGTTTTGGCTCATGAGT+TGG + chr7_2:30061781-30061800 Msa1055520:intron 50.0%
CTTGGAGCCTATACTGTACC+TGG + chr7_2:30061857-30061876 Msa1055520:CDS 50.0%
! AGGTTTGATAGCTCAGGCTC+TGG + chr7_2:30062409-30062428 Msa1055520:CDS 50.0%
TGGAAGAGCAGATATTCCGC+TGG + chr7_2:30062429-30062448 Msa1055520:CDS 50.0%
GTCCTCATGAAATTAGCCGG+TGG + chr7_2:30062632-30062651 Msa1055520:CDS 50.0%
TATGTACCATCCAACAGGGC+TGG - chr7_2:30062732-30062751 None:intergenic 50.0%
GCCCTGTTGGATGGTACATA+AGG + chr7_2:30062732-30062751 Msa1055520:CDS 50.0%
CGCTGTTGGTGTGATCGAAT+AGG - chr7_2:30062963-30062982 None:intergenic 50.0%
ATTTACTGATCCCCGGTGTG+AGG - chr7_2:30063713-30063732 None:intergenic 50.0%
! GTTAGTTTGGGCGAACGCAG+TGG + chr7_2:30058365-30058384 Msa1055520:five_prime_UTR 55.0%
GAAGTGACAACCACAGCTGC+GGG - chr7_2:30058494-30058513 None:intergenic 55.0%
GGAAGTGACAACCACAGCTG+CGG - chr7_2:30058495-30058514 None:intergenic 55.0%
CGCTTTCCTTGCTTCGCCTT+CGG + chr7_2:30058705-30058724 Msa1055520:CDS 55.0%
! TTGAGTTGCCACCACCGAAC+CGG - chr7_2:30058738-30058757 None:intergenic 55.0%
TACGGCCACAATCACAGCCA+CGG + chr7_2:30059558-30059577 Msa1055520:intron 55.0%
GATTACGAGTCGTGCATGGG+GGG + chr7_2:30059652-30059671 Msa1055520:intron 55.0%
TGTACGCCACGGTAGCCAAT+TGG + chr7_2:30059715-30059734 Msa1055520:intron 55.0%
GGTGACATGTCGGAAACACC+AGG + chr7_2:30059826-30059845 Msa1055520:intron 55.0%
CAGCAACATGTGCTGAGCAC+GGG - chr7_2:30059877-30059896 None:intergenic 55.0%
CCAGCAACATGTGCTGAGCA+CGG - chr7_2:30059878-30059897 None:intergenic 55.0%
CTCTTGTCAGGAGCTCCACT+AGG - chr7_2:30061490-30061509 None:intergenic 55.0%
ATTCAGCTGCTCGAAGCCAG+CGG - chr7_2:30062448-30062467 None:intergenic 55.0%
AAAGCTGCTTCCAGCCCTGT+TGG + chr7_2:30062719-30062738 Msa1055520:CDS 55.0%
CAGGCAGAGGATGCGAAAGT+TGG - chr7_2:30062869-30062888 None:intergenic 55.0%
CTAGCACGTAGAACAGGCAG+AGG - chr7_2:30062882-30062901 None:intergenic 55.0%
GGCGAAGCAAGGAAAGCGAG+TGG - chr7_2:30058703-30058722 None:intergenic 60.0%
CTCTAGCCGAAGGCGAAGCA+AGG - chr7_2:30058714-30058733 None:intergenic 60.0%
TGAGTTGCCACCACCGAACC+GGG - chr7_2:30058737-30058756 None:intergenic 60.0%
CCGTGCTCAGCACATGTTGC+TGG + chr7_2:30059875-30059894 Msa1055520:intron 60.0%
AGCCAAAGACGGGCATCCAC+CGG - chr7_2:30062651-30062670 None:intergenic 60.0%
CTGCTTCCAGCCCTGTTGGA+TGG + chr7_2:30062723-30062742 Msa1055520:CDS 60.0%
CTTCGCCTTCGGCTAGAGCC+CGG + chr7_2:30058716-30058735 Msa1055520:CDS 65.0%
CCTTCGGCTAGAGCCCGGTT+CGG + chr7_2:30058721-30058740 Msa1055520:CDS 65.0%
AGCCGGTGGATGCCCGTCTT+TGG + chr7_2:30062646-30062665 Msa1055520:CDS 65.0%
! CCGAACCGGGCTCTAGCCGA+AGG - chr7_2:30058724-30058743 None:intergenic 70.0%
!! TCGGCTAGAGCCCGGTTCGG+TGG + chr7_2:30058724-30058743 Msa1055520:CDS 70.0%
!! GCTAGAGCCCGGTTCGGTGG+TGG + chr7_2:30058727-30058746 Msa1055520:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 30058336 30063966 30058336 ID=Msa1055520;Name=Msa1055520
chr7_2 mRNA 30058336 30063966 30058336 ID=Msa1055520-mRNA-1;Parent=Msa1055520;Name=Msa1055520-mRNA-1;_AED=0.08;_eAED=0.08;_QI=278|1|1|1|0.7|0.54|11|386|333
chr7_2 exon 30058336 30058405 30058336 ID=Msa1055520-mRNA-1:exon:6168;Parent=Msa1055520-mRNA-1
chr7_2 exon 30058428 30058592 30058428 ID=Msa1055520-mRNA-1:exon:6169;Parent=Msa1055520-mRNA-1
chr7_2 exon 30058627 30058882 30058627 ID=Msa1055520-mRNA-1:exon:6170;Parent=Msa1055520-mRNA-1
chr7_2 exon 30059233 30059290 30059233 ID=Msa1055520-mRNA-1:exon:6171;Parent=Msa1055520-mRNA-1
chr7_2 exon 30060667 30060734 30060667 ID=Msa1055520-mRNA-1:exon:6172;Parent=Msa1055520-mRNA-1
chr7_2 exon 30061341 30061520 30061341 ID=Msa1055520-mRNA-1:exon:6173;Parent=Msa1055520-mRNA-1
chr7_2 exon 30061782 30061878 30061782 ID=Msa1055520-mRNA-1:exon:6174;Parent=Msa1055520-mRNA-1
chr7_2 exon 30062402 30062511 30062402 ID=Msa1055520-mRNA-1:exon:6175;Parent=Msa1055520-mRNA-1
chr7_2 exon 30062620 30062753 30062620 ID=Msa1055520-mRNA-1:exon:6176;Parent=Msa1055520-mRNA-1
chr7_2 exon 30062851 30063039 30062851 ID=Msa1055520-mRNA-1:exon:6177;Parent=Msa1055520-mRNA-1
chr7_2 exon 30063628 30063966 30063628 ID=Msa1055520-mRNA-1:exon:6178;Parent=Msa1055520-mRNA-1
chr7_2 five_prime_UTR 30058336 30058405 30058336 ID=Msa1055520-mRNA-1:five_prime_utr;Parent=Msa1055520-mRNA-1
chr7_2 five_prime_UTR 30058428 30058592 30058428 ID=Msa1055520-mRNA-1:five_prime_utr;Parent=Msa1055520-mRNA-1
chr7_2 five_prime_UTR 30058627 30058669 30058627 ID=Msa1055520-mRNA-1:five_prime_utr;Parent=Msa1055520-mRNA-1
chr7_2 CDS 30058670 30058882 30058670 ID=Msa1055520-mRNA-1:cds;Parent=Msa1055520-mRNA-1
chr7_2 CDS 30059233 30059290 30059233 ID=Msa1055520-mRNA-1:cds;Parent=Msa1055520-mRNA-1
chr7_2 CDS 30060667 30060734 30060667 ID=Msa1055520-mRNA-1:cds;Parent=Msa1055520-mRNA-1
chr7_2 CDS 30061341 30061520 30061341 ID=Msa1055520-mRNA-1:cds;Parent=Msa1055520-mRNA-1
chr7_2 CDS 30061782 30061878 30061782 ID=Msa1055520-mRNA-1:cds;Parent=Msa1055520-mRNA-1
chr7_2 CDS 30062402 30062511 30062402 ID=Msa1055520-mRNA-1:cds;Parent=Msa1055520-mRNA-1
chr7_2 CDS 30062620 30062753 30062620 ID=Msa1055520-mRNA-1:cds;Parent=Msa1055520-mRNA-1
chr7_2 CDS 30062851 30062992 30062851 ID=Msa1055520-mRNA-1:cds;Parent=Msa1055520-mRNA-1
chr7_2 three_prime_UTR 30062993 30063039 30062993 ID=Msa1055520-mRNA-1:three_prime_utr;Parent=Msa1055520-mRNA-1
chr7_2 three_prime_UTR 30063628 30063966 30063628 ID=Msa1055520-mRNA-1:three_prime_utr;Parent=Msa1055520-mRNA-1
Gene Sequence

>Msa1055520

ATGGCTTCCTCCGTTTCTTTCTTTTCTCAGCCACTCGCTTTCCTTGCTTCGCCTTCGGCTAGAGCCCGGTTCGGTGGTGGCAACTCAAAGATCCGATCAATTCGGGTTCAGAATAGTCACAAACCAGCTGAATTAACTGTTTCTAGACCTTCTGCTGCTTTAGCCTTTCGTGACCTTGATGCTGATGATTTTCGTCACCCTGTTGATTTAGAGAATACGTTGATGCTGAGAGCGATTCCGGGATTGAAAGAAGTGGGAAAAGCTCTTCTAGGAACTGTAACAGAGCAGGTCATGCTCCTTGAGAACATAGGGACATCCGTCCTTGTCTCCAAAAATCAGCTTTCTGATCTTCACAACTTAATGGCGGAAGCTGCAGAAATATTAAATGTCAATGCCCCTGATCTATATGTTCGTCAAAGTCCTGTGCCAAATGCATATACATTAGCTATAAGTGGTAAACAGCCATTTGTCGTTATTCATACTAGCCTAGTGGAGCTCCTGACAAGAGCTGAATTGCAGGCTGTTTTGGCTCATGAGTTGGGTCACCTAAAATGTGATCATGGTGTGTGGCTTACATATGCAAATATTCTAACTCTTGGAGCCTATACTGTACCTGGTATTGGAGGTTTGATAGCTCAGGCTCTGGAAGAGCAGATATTCCGCTGGCTTCGAGCAGCTGAATTAACTTGTGATCGTGCAGCTCTTCTTGTTGCTCAAGACCCTAGGGTTGTCATCTCTGTCCTCATGAAATTAGCCGGTGGATGCCCGTCTTTGGCTGATCAACTAAATGTCGATGCATTCTTGGAGCAAGCTCGCTCTTATGAAAAAGCTGCTTCCAGCCCTGTTGGATGGTACATAAGGAATGCTCAAACAAGCCAACTTTCGCATCCTCTGCCTGTTCTACGTGCTAGTGAAATTGATGAATGGTCAAGAAGTTCAGCTTATAAATCTATTTTGAAACGTGGAATACCTATTCGATCACACCAACAGCGAAAATTCTAG

Protein sequence

>Msa1055520

MASSVSFFSQPLAFLASPSARARFGGGNSKIRSIRVQNSHKPAELTVSRPSAALAFRDLDADDFRHPVDLENTLMLRAIPGLKEVGKALLGTVTEQVMLLENIGTSVLVSKNQLSDLHNLMAEAAEILNVNAPDLYVRQSPVPNAYTLAISGKQPFVVIHTSLVELLTRAELQAVLAHELGHLKCDHGVWLTYANILTLGAYTVPGIGGLIAQALEEQIFRWLRAAELTCDRAALLVAQDPRVVISVLMKLAGGCPSLADQLNVDAFLEQARSYEKAASSPVGWYIRNAQTSQLSHPLPVLRASEIDEWSRSSAYKSILKRGIPIRSHQQRKF*