AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0695130


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0695130 MtrunA17_Chr4g0046111 90.130 537 12 4 1 504 1 529 0.0 944
Msa0695130 MtrunA17_Chr4g0002221 51.818 110 39 3 78 186 21 117 3.84e-22 92.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0695130 AT2G34040.3 64.432 537 155 6 1 512 1 526 0.0 671
Msa0695130 AT2G34040.1 64.432 537 155 6 1 512 1 526 0.0 671
Msa0695130 AT1G29030.1 61.967 539 157 9 1 510 1 520 0.0 639
Msa0695130 AT1G29030.2 59.369 539 149 9 1 510 1 498 0.0 600
Msa0695130 AT2G34040.2 65.127 433 124 4 1 409 1 430 0.0 556
Msa0695130 AT3G19515.2 45.455 253 133 3 213 460 79 331 1.63e-59 211
Msa0695130 AT3G19515.2 35.338 133 63 1 12 121 1 133 2.78e-18 89.4
Msa0695130 AT1G23935.1 35.459 392 183 10 80 460 38 370 2.39e-54 199
Msa0695130 AT1G23935.3 35.202 321 151 8 80 397 38 304 1.41e-42 164
Msa0695130 AT1G23935.2 35.202 321 151 8 80 397 38 304 1.46e-42 164

Find 143 sgRNAs with CRISPR-Local

Find 497 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCTTGTTCACTTTGTTTC+AGG 0.173385 4_4:-64561637 Msa0695130:intron
CTGAAGAGTTTGAGCCTATT+TGG 0.180255 4_4:-64559161 Msa0695130:CDS
TATAGAATTTCGAATGTTTA+TGG 0.180281 4_4:-64559189 Msa0695130:CDS
GGGCGGGGCCAGGGCCAGGC+TGG 0.198010 4_4:-64554401 Msa0695130:CDS
AAGTTCTTTCCTGAACTTTC+CGG 0.262685 4_4:-64561223 Msa0695130:CDS
ATAAGAGAATCAACCTTTCT+TGG 0.268861 4_4:-64554827 Msa0695130:CDS
TGTGGTTACAAAATTGTTAC+TGG 0.293298 4_4:-64556178 Msa0695130:CDS
CAAGGGGCGGGGCCAGGGCC+AGG 0.304116 4_4:-64554405 Msa0695130:CDS
TTGAAGAAGGGTCGAGGTTC+TGG 0.305212 4_4:-64554516 Msa0695130:CDS
ATTATTGTACTAAAATTCTT+TGG 0.311546 4_4:-64554254 Msa0695130:three_prime_UTR
GTGTCGTTCCATTTCCTCTT+GGG 0.311853 4_4:+64559362 None:intergenic
GTGGAGCAAGGGGCGGGGCC+AGG 0.314643 4_4:-64554411 Msa0695130:CDS
ACTCAATACTCATCTTGATT+TGG 0.327382 4_4:-64561194 Msa0695130:intron
AAGAAGTCCTATTTGTATTC+CGG 0.329262 4_4:+64554278 None:intergenic
GGCGGGGCCAGGGCCAGGCT+GGG 0.334375 4_4:-64554400 Msa0695130:CDS
TGTTATTCCTGCCAGCTTCC+TGG 0.336157 4_4:-64558102 Msa0695130:intron
CTTCTTCAATGCAATATTGT+TGG 0.340511 4_4:+64554530 None:intergenic
CAAATAGGCTCAAACTCTTC+AGG 0.344533 4_4:+64559162 None:intergenic
GGGCCAGGGCCAGGCTGGGG+TGG 0.345797 4_4:-64554396 Msa0695130:CDS
TTTGTAACCACATAAACTAT+TGG 0.362776 4_4:+64556189 None:intergenic
GGCTGAAAACAACAAATCTA+TGG 0.365544 4_4:-64555211 Msa0695130:CDS
CAGAGTTTAGAAGATGTAAC+TGG 0.369726 4_4:-64559212 Msa0695130:CDS
CATCGTCAAAATATTATTGC+AGG 0.371200 4_4:+64555021 None:intergenic
AAAGTACTTACCACAACAAT+TGG 0.378420 4_4:+64558807 None:intergenic
ATCGAGAAGCTCTACCAATA+TGG 0.380527 4_4:-64561452 Msa0695130:CDS
CGACCACCCCAGCCTGGCCC+TGG 0.381808 4_4:+64554393 None:intergenic
AGAGCACTAGGCGGATTATC+TGG 0.382189 4_4:-64554468 Msa0695130:CDS
TGTGTCGTTCCATTTCCTCT+TGG 0.385006 4_4:+64559361 None:intergenic
ATAGATAAGATCTAATTTCA+TGG 0.394407 4_4:-64554309 Msa0695130:three_prime_UTR
TTCAACAGTTCAGCTTTGAT+AGG 0.395370 4_4:+64559387 None:intergenic
GCGGGGCCAGGGCCAGGCTG+GGG 0.396292 4_4:-64554399 Msa0695130:CDS
GGCTGGGGTGGTCGCGGAAG+AGG 0.397393 4_4:-64554384 Msa0695130:CDS
TTTAACCTGAGATTTGTCTT+TGG 0.398392 4_4:+64561412 None:intergenic
AAGGATACACCTGAGAATAT+TGG 0.399203 4_4:-64560981 Msa0695130:CDS
GTTGAAGCCCCAAGAGGAAA+TGG 0.404679 4_4:-64559370 Msa0695130:CDS
AGTTGAGTTGCTCGCCATAT+TGG 0.407050 4_4:+64561438 None:intergenic
TCTTGTGCAACTTCTTTCCT+CGG 0.408538 4_4:-64560943 Msa0695130:CDS
TTCAGCAACTGAACAATAGA+AGG 0.408687 4_4:+64558000 None:intergenic
CTCGATGTAAGCAGCTTCTT+CGG 0.414250 4_4:+64561469 None:intergenic
GGGCCAGGCTGGGGTGGTCG+CGG 0.416399 4_4:-64554390 Msa0695130:CDS
GTAGAGGTGGAGCAAGGGGC+GGG 0.417123 4_4:-64554417 Msa0695130:CDS
TTACTTCTGCAGAGCGAAAA+CGG 0.420256 4_4:-64554575 Msa0695130:intron
GGTAGAGGTGGAGCAAGGGG+CGG 0.420805 4_4:-64554418 Msa0695130:CDS
AATATTGTTGGATCCATTGC+CGG 0.421230 4_4:+64554542 None:intergenic
AGTGCAAGACCGGAAAGTTC+AGG 0.423488 4_4:+64561214 None:intergenic
AGAGGAAGTGGAAGAGGTAG+AGG 0.424791 4_4:-64554366 Msa0695130:CDS
TCGGAAGGTTCAGTAGTCAT+TGG 0.427839 4_4:+64561488 None:intergenic
TGTAAAATTCATCTCTTCTC+CGG 0.428906 4_4:+64556355 None:intergenic
GTAATGTTGAAGAGCAAATT+CGG 0.428999 4_4:-64559542 Msa0695130:CDS
TGCGGTAGTTGATGCAGATT+TGG 0.429378 4_4:+64554794 None:intergenic
GACTGTACCGGAATACAAAT+AGG 0.429536 4_4:-64554285 Msa0695130:three_prime_UTR
CATAAACTATTGGTGGCATT+AGG 0.430397 4_4:+64556199 None:intergenic
TTTGAGCCTATTTGGAGAAA+AGG 0.433300 4_4:-64559153 Msa0695130:CDS
CTTCCGCGACCACCCCAGCC+TGG 0.433734 4_4:+64554387 None:intergenic
TGGAGCAAGGGGCGGGGCCA+GGG 0.435135 4_4:-64554410 Msa0695130:CDS
AGAGTCTCTGGTGGAGGTAG+AGG 0.435438 4_4:-64554433 Msa0695130:CDS
TACATGACTTGGAAGAAAAC+CGG 0.437540 4_4:-64556374 Msa0695130:CDS
GGAGGTAGAGGTGGAGCAAG+GGG 0.446283 4_4:-64554421 Msa0695130:CDS
GAGGTAGAGGTAGAGGGTAT+TGG 0.448376 4_4:-64554353 Msa0695130:CDS
TGGTTGCTTCTTTCCAAGAA+AGG 0.448903 4_4:+64554814 None:intergenic
AGTGGAAGAGGTAGAGGTAG+AGG 0.449138 4_4:-64554360 Msa0695130:CDS
TTACTGGTCAGCCATCTGAT+AGG 0.452743 4_4:-64556162 Msa0695130:CDS
TGCTAAAACTGATGAAGAAA+AGG 0.453582 4_4:-64555184 Msa0695130:CDS
TGATTCCCGCTTGCATCAAA+AGG 0.455735 4_4:+64554129 None:intergenic
CAACAATATTGCATTGAAGA+AGG 0.456268 4_4:-64554529 Msa0695130:CDS
GGAAAGAACTTGAAGAACTT+AGG 0.456756 4_4:+64561235 None:intergenic
AACATTCTACATATCAGAAA+TGG 0.457489 4_4:+64554035 None:intergenic
ATTTCATCACCTAGCTCAAA+AGG 0.458193 4_4:-64556309 Msa0695130:intron
TGGAGGAAGAGCAGAGTCTC+TGG 0.458450 4_4:-64554445 Msa0695130:CDS
TGATACAAAGTACTCTCAAA+AGG 0.461844 4_4:+64554708 None:intergenic
TCTGATGTCTCTGCTGAGGC+AGG 0.468867 4_4:-64560796 Msa0695130:CDS
AATGCCACCAATAGTTTATG+TGG 0.470729 4_4:-64556196 Msa0695130:CDS
TAGAGGTGGAGCAAGGGGCG+GGG 0.471903 4_4:-64554416 Msa0695130:CDS
CGCGGAAGAGGAAGTGGAAG+AGG 0.472771 4_4:-64554372 Msa0695130:CDS
GGTGGTCGCGGAAGAGGAAG+TGG 0.474401 4_4:-64554378 Msa0695130:CDS
ATCAAACAGATCATATTCAT+AGG 0.483162 4_4:-64558857 Msa0695130:CDS
AGCTCTTCCATACGCTCAGC+TGG 0.487308 4_4:+64559128 None:intergenic
TAGTTTCTTGATTGTAGCCC+GGG 0.492094 4_4:+64555245 None:intergenic
CTTGTGCAACTTCTTTCCTC+GGG 0.493032 4_4:-64560942 Msa0695130:intron
GTGGAGGTAGAGGTGGAGCA+AGG 0.494022 4_4:-64554423 Msa0695130:CDS
GGATGACCTTAGTCGTGAAA+AGG 0.497612 4_4:-64559521 Msa0695130:intron
GTACTAAAATTCTTTGGCAG+AGG 0.500387 4_4:-64554248 Msa0695130:three_prime_UTR
CGAAAACGGCCGGCTACTAC+CGG 0.501290 4_4:-64554561 Msa0695130:CDS
GATCCATTGCCGGTAGTAGC+CGG 0.501494 4_4:+64554552 None:intergenic
ATGAGTATTGAGTGCAAGAC+CGG 0.502685 4_4:+64561204 None:intergenic
TGACAAGTGGATTTATATGA+AGG 0.503577 4_4:-64554058 Msa0695130:three_prime_UTR
TTCTATTGTTCAGTTGCTGA+AGG 0.506926 4_4:-64557998 Msa0695130:intron
GTAACCACATAAACTATTGG+TGG 0.507469 4_4:+64556192 None:intergenic
ACTTTGTTTAAGCACATTCG+TGG 0.507835 4_4:-64559564 Msa0695130:CDS
GAGCTGCTTGGAATCATTGA+AGG 0.510702 4_4:-64559110 Msa0695130:CDS
ACTGAACATCTTATGCCCCT+TGG 0.512771 4_4:-64554102 Msa0695130:three_prime_UTR
GTCTCTGGTGGAGGTAGAGG+TGG 0.515825 4_4:-64554430 Msa0695130:CDS
CAACTTGTCAATAGAGCACT+AGG 0.521699 4_4:-64554480 Msa0695130:CDS
TTAGTTTCTTGATTGTAGCC+CGG 0.527233 4_4:+64555244 None:intergenic
TGTCGTTCCATTTCCTCTTG+GGG 0.527654 4_4:+64559363 None:intergenic
TGGAGGTAGAGGTGGAGCAA+GGG 0.527803 4_4:-64554422 Msa0695130:CDS
AAAGGCTCCAGCTGAGCGTA+TGG 0.527823 4_4:-64559135 Msa0695130:CDS
GATACAAAGTACTCTCAAAA+GGG 0.529719 4_4:+64554709 None:intergenic
CTCTTATCTCCAATAAAAGA+AGG 0.529752 4_4:+64554843 None:intergenic
GAGCGTATGGAAGAGCTGCT+TGG 0.531459 4_4:-64559122 Msa0695130:CDS
CAAGAAACTAACTCAAGGAA+TGG 0.535136 4_4:-64555232 Msa0695130:CDS
AACAATATTGCATTGAAGAA+GGG 0.536121 4_4:-64554528 Msa0695130:CDS
CGGCCGGCTACTACCGGCAA+TGG 0.538902 4_4:-64554555 Msa0695130:CDS
TCAACAGTTCAGCTTTGATA+GGG 0.540300 4_4:+64559388 None:intergenic
GGTCAGCCATCTGATAGGCT+TGG 0.540430 4_4:-64556157 Msa0695130:CDS
AAGAGCAGAGTCTCTGGTGG+AGG 0.542097 4_4:-64554439 Msa0695130:CDS
TATTTCATAATGCTTTAAGC+GGG 0.545838 4_4:+64554011 None:intergenic
CATGGCACTTCCAATTGTTG+TGG 0.547852 4_4:-64558817 Msa0695130:intron
TAATTTCATGGAGACTGTAC+CGG 0.550058 4_4:-64554297 Msa0695130:three_prime_UTR
CTCTTCCAAAGACAAATCTC+AGG 0.550702 4_4:-64561417 Msa0695130:intron
CAGAACGTCAAGGATTATCA+AGG 0.554085 4_4:-64561316 Msa0695130:CDS
GCATGTAATGTAATGACAAG+TGG 0.567871 4_4:-64554071 Msa0695130:three_prime_UTR
GGAGCGTGATGCTGTGCATA+AGG 0.570343 4_4:-64560820 Msa0695130:CDS
TTCTGCAGAGCGAAAACGGC+CGG 0.574365 4_4:-64554571 Msa0695130:intron
ATATTTCATAATGCTTTAAG+CGG 0.577716 4_4:+64554010 None:intergenic
ATGTAAGCAGCTTCTTCGGA+AGG 0.580643 4_4:+64561473 None:intergenic
AAAACGTTGAGGAGTTCACC+CGG 0.582162 4_4:-64555263 Msa0695130:CDS
GACCTGAAACAAAGTGAACA+AGG 0.591509 4_4:+64561635 None:intergenic
GTGGAAGAGGTAGAGGTAGA+GGG 0.593366 4_4:-64554359 Msa0695130:CDS
ATTGCATTGAAGAAGGGTCG+AGG 0.602060 4_4:-64554522 Msa0695130:CDS
GAATCTTGTGGTGTTGTGAA+AGG 0.604189 4_4:+64558036 None:intergenic
ACAATCAAGAAACTAACTCA+AGG 0.609790 4_4:-64555237 Msa0695130:CDS
CAATTGGAAGTGCCATGTGA+AGG 0.614103 4_4:+64558823 None:intergenic
AAATGAGTAATCACATTGAA+CGG 0.615862 4_4:+64559068 None:intergenic
AAGAAGGGTCGAGGTTCTGG+TGG 0.621072 4_4:-64554513 Msa0695130:CDS
TGAAAGGTGAAAACTCTGCA+AGG 0.622969 4_4:+64558052 None:intergenic
CTAGGCGGATTATCTGGTGG+AGG 0.626238 4_4:-64554462 Msa0695130:CDS
TTACATGCATACATAACCAA+GGG 0.626427 4_4:+64554086 None:intergenic
CTGCTGAGGCAGGATGTGAA+AGG 0.630646 4_4:-64560786 Msa0695130:intron
ACAATACCCAACAGCTGGTG+CGG 0.630788 4_4:+64554776 None:intergenic
AGGAAGAGCAGAGTCTCTGG+TGG 0.630795 4_4:-64554442 Msa0695130:CDS
ATTACATGCATACATAACCA+AGG 0.636612 4_4:+64554085 None:intergenic
GTTGATATCATGCCTTCACA+TGG 0.637100 4_4:-64558835 Msa0695130:CDS
AGGCTCTGATGTCTCTGCTG+AGG 0.641155 4_4:-64560800 Msa0695130:CDS
TCTTCTCCAAGCCTATCAGA+TGG 0.644984 4_4:+64556151 None:intergenic
AGCATTTGTCGTGAATCTTG+TGG 0.650972 4_4:+64558024 None:intergenic
CATTCTACAGAAACAAACTT+CGG 0.652036 4_4:+64554175 None:intergenic
GCACTAGGCGGATTATCTGG+TGG 0.669386 4_4:-64554465 Msa0695130:CDS
TGAACTGTTGAAGCCCCAAG+AGG 0.674998 4_4:-64559376 Msa0695130:CDS
ACCTGAAACAAAGTGAACAA+GGG 0.682642 4_4:+64561636 None:intergenic
AAACGTTGAGGAGTTCACCC+GGG 0.696711 4_4:-64555262 Msa0695130:CDS
TACATGCATACATAACCAAG+GGG 0.720060 4_4:+64554087 None:intergenic
CTTGTCAATAGAGCACTAGG+CGG 0.775828 4_4:-64554477 Msa0695130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTATATAGAAGAT+AGG + chr4_4:64555703-64555722 None:intergenic 10.0%
!! ATATAAAATAAATTAAAGAG+AGG - chr4_4:64555710-64555729 Msa0695130:intron 10.0%
!! TATAAAATAAATTAAAGAGA+GGG - chr4_4:64555711-64555730 Msa0695130:intron 10.0%
!!! ATAAAACTTTTAATCAATTA+TGG + chr4_4:64557201-64557220 None:intergenic 10.0%
!!! GCTAAATATTTTTTTAAAAA+AGG + chr4_4:64560778-64560797 None:intergenic 10.0%
!!! TTCGTTTTTTCATTTATTTA+GGG - chr4_4:64554370-64554389 Msa0695130:CDS 15.0%
!! ATTTCAACTTTATTCTAATT+AGG - chr4_4:64554399-64554418 Msa0695130:CDS 15.0%
!! TTTCAACTTTATTCTAATTA+GGG - chr4_4:64554400-64554419 Msa0695130:CDS 15.0%
!! TGATTACATTGAATTATTAT+CGG + chr4_4:64554634-64554653 None:intergenic 15.0%
!!! ATTTTTTTTAGATGAATTTG+TGG - chr4_4:64554911-64554930 Msa0695130:intron 15.0%
!!! TATAAATTTTGTTAGAGATA+AGG - chr4_4:64556255-64556274 Msa0695130:intron 15.0%
!!! GAATACATTTTTTATTAGAT+CGG + chr4_4:64556420-64556439 None:intergenic 15.0%
!!! TGATATTTTTTGTAACATAA+TGG - chr4_4:64556491-64556510 Msa0695130:intron 15.0%
!! AAATAAAAAAAACACAGAAA+AGG + chr4_4:64556714-64556733 None:intergenic 15.0%
!! TGTTATATTGTGTTTAAATT+TGG + chr4_4:64559295-64559314 None:intergenic 15.0%
!! AAATTTAAACACAATATAAC+AGG - chr4_4:64559294-64559313 Msa0695130:intron 15.0%
!! AATTTAAACACAATATAACA+GGG - chr4_4:64559295-64559314 Msa0695130:intron 15.0%
!! AATAATTAAAAGATCAAGAA+GGG + chr4_4:64560847-64560866 None:intergenic 15.0%
!! ATTATTGTACTAAAATTCTT+TGG - chr4_4:64561498-64561517 Msa0695130:exon 15.0%
!!! CTTCGTTTTTTCATTTATTT+AGG - chr4_4:64554369-64554388 Msa0695130:CDS 20.0%
!! ATGTCAATTATAGAAGATAT+TGG - chr4_4:64555004-64555023 Msa0695130:intron 20.0%
!!! AATCTTTTTCTTAAGATCAA+AGG - chr4_4:64555190-64555209 Msa0695130:CDS 20.0%
!!! ACATAATTCTAAAATGTTTG+AGG + chr4_4:64555259-64555278 None:intergenic 20.0%
!!! ATTTTATATAGAAGATAGGT+TGG + chr4_4:64555699-64555718 None:intergenic 20.0%
!!! ATTGTTTTTGTTGAAGATAT+TGG - chr4_4:64555795-64555814 Msa0695130:intron 20.0%
!! TACAAGAATGTGATTAATTA+TGG - chr4_4:64556005-64556024 Msa0695130:intron 20.0%
!! TTCATAATTACACTACTATA+AGG + chr4_4:64556152-64556171 None:intergenic 20.0%
!! TCTAAATGTCTTCAATATAT+AGG - chr4_4:64556337-64556356 Msa0695130:CDS 20.0%
!! TATAGAATTTCGAATGTTTA+TGG - chr4_4:64556563-64556582 Msa0695130:intron 20.0%
!!! TTATTTAACTGATGATTTGT+AGG - chr4_4:64556860-64556879 Msa0695130:intron 20.0%
!! AAAAAGTAACAATAAGTTTG+TGG - chr4_4:64557256-64557275 Msa0695130:intron 20.0%
!!! ATATCTATGATGATTTTTAC+TGG - chr4_4:64557531-64557550 Msa0695130:intron 20.0%
!! GGTAAACATTTCTTAAAAAA+TGG - chr4_4:64557775-64557794 Msa0695130:intron 20.0%
!! CTATGAATATTAACAATCAA+AGG - chr4_4:64557944-64557963 Msa0695130:intron 20.0%
!!! GAAATCATAACTGATTTTAT+TGG + chr4_4:64558308-64558327 None:intergenic 20.0%
!!! TTAGTTTTTTCATGAAAAAC+CGG - chr4_4:64558376-64558395 Msa0695130:intron 20.0%
!! GTAACAATTTAATACATAAC+TGG + chr4_4:64559170-64559189 None:intergenic 20.0%
!!! ATTGATTTGAAATTAAAGAG+TGG - chr4_4:64559230-64559249 Msa0695130:intron 20.0%
!!! TATTTTTACTGGTCTAAAAA+AGG + chr4_4:64559473-64559492 None:intergenic 20.0%
!!! ATTTAGGATAAAAAATGTTG+AGG - chr4_4:64559753-64559772 Msa0695130:intron 20.0%
!!! TTTAGGATAAAAAATGTTGA+GGG - chr4_4:64559754-64559773 Msa0695130:intron 20.0%
!! TAATTGTTATGTTACATTTC+TGG - chr4_4:64560438-64560457 Msa0695130:intron 20.0%
!! CAATAATTAAAAGATCAAGA+AGG + chr4_4:64560848-64560867 None:intergenic 20.0%
!! ATTGAATTGTTCAATTTGTA+TGG - chr4_4:64560864-64560883 Msa0695130:intron 20.0%
!! ATAGATAAGATCTAATTTCA+TGG - chr4_4:64561443-64561462 Msa0695130:CDS 20.0%
!!! ATATTTCATAATGCTTTAAG+CGG + chr4_4:64561745-64561764 None:intergenic 20.0%
!!! TTCGTTTTGATTTGATTTTG+AGG + chr4_4:64554088-64554107 None:intergenic 25.0%
! GAAGCAAAAAAATACAGATA+GGG + chr4_4:64554148-64554167 None:intergenic 25.0%
!!! CTGATTTGAATTTGATTTGA+GGG + chr4_4:64554170-64554189 None:intergenic 25.0%
!!! TCTGATTTGAATTTGATTTG+AGG + chr4_4:64554171-64554190 None:intergenic 25.0%
!! CTATATTTGAAATTACCTGA+AGG - chr4_4:64555037-64555056 Msa0695130:CDS 25.0%
!!! TAATTCTAAAATGTTTGAGG+AGG + chr4_4:64555256-64555275 None:intergenic 25.0%
! TAGCTTGAACTAAAAATTTG+GGG + chr4_4:64555601-64555620 None:intergenic 25.0%
! GTAGCTTGAACTAAAAATTT+GGG + chr4_4:64555602-64555621 None:intergenic 25.0%
! TGTAGCTTGAACTAAAAATT+TGG + chr4_4:64555603-64555622 None:intergenic 25.0%
! AAATGTTATGCGCATTAAAT+AGG + chr4_4:64555764-64555783 None:intergenic 25.0%
! GAAAAAAGTTTCAAAGAGTT+TGG + chr4_4:64556060-64556079 None:intergenic 25.0%
! CAATAAAATAACCAATCACA+TGG + chr4_4:64556288-64556307 None:intergenic 25.0%
!!! GTTTTTTACCAGTTCATTTA+CGG - chr4_4:64556456-64556475 Msa0695130:intron 25.0%
! TAATAAATCCGTAAATGAAC+TGG + chr4_4:64556467-64556486 None:intergenic 25.0%
! AAATGAGTAATCACATTGAA+CGG + chr4_4:64556687-64556706 None:intergenic 25.0%
!! TTGATTTTAGACTTCTATTC+TGG - chr4_4:64556783-64556802 Msa0695130:intron 25.0%
! ATCAAACAGATCATATTCAT+AGG - chr4_4:64556895-64556914 Msa0695130:intron 25.0%
!!! ATTGGAGTTTTCTTGTTTTT+TGG - chr4_4:64557149-64557168 Msa0695130:intron 25.0%
!!! TTGGAGTTTTCTTGTTTTTT+GGG - chr4_4:64557150-64557169 Msa0695130:intron 25.0%
! TTCTTAAAAAATGGCATGAT+TGG - chr4_4:64557784-64557803 Msa0695130:intron 25.0%
! AAAAAACCACTTAATTCAGA+AGG - chr4_4:64558150-64558169 Msa0695130:intron 25.0%
! ATATTTACTAAGTGTCTGTT+TGG + chr4_4:64558256-64558275 None:intergenic 25.0%
!!! TAGTTTTTTCATGAAAAACC+GGG - chr4_4:64558377-64558396 Msa0695130:intron 25.0%
! TAACTATATAAAGATTGCAC+CGG + chr4_4:64558719-64558738 None:intergenic 25.0%
!! TTTTGATCTTGATATACTTG+AGG + chr4_4:64558969-64558988 None:intergenic 25.0%
!!! TTCTAGTTTATGCTGTTATT+TGG - chr4_4:64559005-64559024 Msa0695130:intron 25.0%
! TATCAATGCAAATCCATATT+TGG + chr4_4:64559087-64559106 None:intergenic 25.0%
!! ATCGATTCAAATGAATTTGT+AGG + chr4_4:64559114-64559133 None:intergenic 25.0%
!!! CAACAGCTTAATATTTTTAC+TGG + chr4_4:64559484-64559503 None:intergenic 25.0%
! TTTGTAACCACATAAACTAT+TGG + chr4_4:64559566-64559585 None:intergenic 25.0%
! TTAGGATAAAAAATGTTGAG+GGG - chr4_4:64559755-64559774 Msa0695130:intron 25.0%
!! ATATTTTACCCTAAACTCAA+AGG + chr4_4:64559870-64559889 None:intergenic 25.0%
! AATTGACTACACTAGAAAAT+AGG - chr4_4:64560061-64560080 Msa0695130:intron 25.0%
! GTTATGTGTCATAGTAATAT+TGG - chr4_4:64560251-64560270 Msa0695130:intron 25.0%
!! ATGAGAAGTGTATTAGTAAA+TGG + chr4_4:64560351-64560370 None:intergenic 25.0%
!!! TAATATTTTGACGATGACAA+AGG - chr4_4:64560738-64560757 Msa0695130:intron 25.0%
!!! TTAAAGATCTTGTGTTGATT+TGG - chr4_4:64561113-64561132 Msa0695130:intron 25.0%
! AACAATATTGCATTGAAGAA+GGG - chr4_4:64561224-64561243 Msa0695130:CDS 25.0%
! AACATTCTACATATCAGAAA+TGG + chr4_4:64561720-64561739 None:intergenic 25.0%
!! TATTTCATAATGCTTTAAGC+GGG + chr4_4:64561744-64561763 None:intergenic 25.0%
GGAAGCAAAAAAATACAGAT+AGG + chr4_4:64554149-64554168 None:intergenic 30.0%
TTTAACCTGAGATTTGTCTT+TGG + chr4_4:64554343-64554362 None:intergenic 30.0%
ACTCAATACTCATCTTGATT+TGG - chr4_4:64554558-64554577 Msa0695130:CDS 30.0%
TTCAATGTAATCACATGTGT+TGG - chr4_4:64554641-64554660 Msa0695130:intron 30.0%
! GTGTTTTTCTATTACTGTAC+AGG - chr4_4:64554709-64554728 Msa0695130:intron 30.0%
TTTCTATTACTGTACAGGTT+CGG - chr4_4:64554714-64554733 Msa0695130:intron 30.0%
ACCTGAGAATATTGGAAAAA+TGG - chr4_4:64554779-64554798 Msa0695130:intron 30.0%
!! ACCATTTTTCCAATATTCTC+AGG + chr4_4:64554783-64554802 None:intergenic 30.0%
TTATTGATCAAAGATCCTTC+AGG + chr4_4:64555055-64555074 None:intergenic 30.0%
!!! TGAAGATATTGGTTTTGCAA+TGG - chr4_4:64555806-64555825 Msa0695130:intron 30.0%
!!! GAAGATATTGGTTTTGCAAT+GGG - chr4_4:64555807-64555826 Msa0695130:intron 30.0%
! TTGAGCCTTTTTGATATACA+TGG - chr4_4:64555830-64555849 Msa0695130:intron 30.0%
CAATGCCATGTATATCAAAA+AGG + chr4_4:64555838-64555857 None:intergenic 30.0%
! CAAGTTTTACTACCACTTAA+AGG + chr4_4:64555963-64555982 None:intergenic 30.0%
TTAATCACATTCTTGTACCA+AGG + chr4_4:64556002-64556021 None:intergenic 30.0%
AAAATATGCTTTCCAGATTC+TGG - chr4_4:64556093-64556112 Msa0695130:intron 30.0%
AATCATAAATGTCCAGAATC+TGG + chr4_4:64556108-64556127 None:intergenic 30.0%
GTAATGTTGAAGAGCAAATT+CGG - chr4_4:64556210-64556229 Msa0695130:intron 30.0%
! TTATAACCTTTTCACGACTA+AGG + chr4_4:64556240-64556259 None:intergenic 30.0%
AAAACTGTGCAAATAAGTTG+AGG - chr4_4:64556818-64556837 Msa0695130:intron 30.0%
! AAACTGTGCAAATAAGTTGA+GGG - chr4_4:64556819-64556838 Msa0695130:intron 30.0%
! AAAGTACTTACCACAACAAT+TGG + chr4_4:64556948-64556967 None:intergenic 30.0%
CTGCAAGAAAAAAATTGAGT+TGG + chr4_4:64557020-64557039 None:intergenic 30.0%
!!! ACTCAATTTTTTTCTTGCAG+AGG - chr4_4:64557020-64557039 Msa0695130:intron 30.0%
!!! CTCAATTTTTTTCTTGCAGA+GGG - chr4_4:64557021-64557040 Msa0695130:intron 30.0%
!!! TCAATTTTTTTCTTGCAGAG+GGG - chr4_4:64557022-64557041 Msa0695130:intron 30.0%
!!! TATTATACCTGTTTTTGACC+AGG - chr4_4:64557084-64557103 Msa0695130:intron 30.0%
AAGTAACAATAAGTTTGTGG+TGG - chr4_4:64557259-64557278 Msa0695130:intron 30.0%
! TTAGTCATAAGTTCTGCTTT+TGG - chr4_4:64557298-64557317 Msa0695130:intron 30.0%
TTAAACTAAAGAATCGTAGC+CGG + chr4_4:64557476-64557495 None:intergenic 30.0%
TAATGAATAAGCACTAACCT+AGG - chr4_4:64557909-64557928 Msa0695130:intron 30.0%
AAAGGAAGTTGTACATTGAA+AGG - chr4_4:64557962-64557981 Msa0695130:intron 30.0%
GAATCTATCTGTAACAAGTT+TGG + chr4_4:64558052-64558071 None:intergenic 30.0%
!! GATTTTAAGAAGCTGAGAAT+TGG + chr4_4:64558177-64558196 None:intergenic 30.0%
TTCTCAGCTTCTTAAAATCA+CGG - chr4_4:64558178-64558197 Msa0695130:intron 30.0%
TCAAACTTCAAACGATCAAT+TGG + chr4_4:64558284-64558303 None:intergenic 30.0%
TGTAAGAGATAAGTTCTTTC+AGG + chr4_4:64558332-64558351 None:intergenic 30.0%
TTACTCCAACAACTCAAATT+AGG + chr4_4:64558463-64558482 None:intergenic 30.0%
! GGGTTACTTTATGAAAACAA+AGG + chr4_4:64558691-64558710 None:intergenic 30.0%
AACTATATAAAGATTGCACC+GGG + chr4_4:64558718-64558737 None:intergenic 30.0%
! TTATGAACCCAACTTTTTGA+GGG - chr4_4:64559192-64559211 Msa0695130:CDS 30.0%
TAGCTGTTGTTAGTAATCAT+TGG - chr4_4:64559259-64559278 Msa0695130:intron 30.0%
! CTTTTCAGAAATACATGACT+TGG - chr4_4:64559367-64559386 Msa0695130:CDS 30.0%
TGTAAAATTCATCTCTTCTC+CGG + chr4_4:64559400-64559419 None:intergenic 30.0%
!! ATCAAACTTGGTTGTTTTGT+AGG - chr4_4:64559528-64559547 Msa0695130:CDS 30.0%
TGTGGTTACAAAATTGTTAC+TGG - chr4_4:64559574-64559593 Msa0695130:CDS 30.0%
! AATATGATGATTTTACCGAG+AGG - chr4_4:64559635-64559654 Msa0695130:intron 30.0%
AAAAAAAAGTCCATACCTCT+CGG + chr4_4:64559653-64559672 None:intergenic 30.0%
TAAAGAATTTACCTACTCGT+TGG - chr4_4:64559688-64559707 Msa0695130:intron 30.0%
AAATATACAAACCAACGAGT+AGG + chr4_4:64559702-64559721 None:intergenic 30.0%
AATTCAGACCATACTAATGA+AGG - chr4_4:64559823-64559842 Msa0695130:intron 30.0%
TGAACAAAGTATGTTGTCAA+AGG - chr4_4:64559914-64559933 Msa0695130:intron 30.0%
GAACAAAGTATGTTGTCAAA+GGG - chr4_4:64559915-64559934 Msa0695130:intron 30.0%
AACAAAGTATGTTGTCAAAG+GGG - chr4_4:64559916-64559935 Msa0695130:intron 30.0%
GATTTGAATCATGAATCAGA+AGG + chr4_4:64560087-64560106 None:intergenic 30.0%
TCATGATTCAAATCTCGATT+TGG - chr4_4:64560093-64560112 Msa0695130:intron 30.0%
! TATGGTCTGGTTTACATTTA+TGG - chr4_4:64560126-64560145 Msa0695130:intron 30.0%
TTTGTATCCATCTTTCCTTT+GGG - chr4_4:64560392-64560411 Msa0695130:intron 30.0%
AATTAACAACCCAAAATGAC+CGG + chr4_4:64560423-64560442 None:intergenic 30.0%
ACAATCAAGAAACTAACTCA+AGG - chr4_4:64560515-64560534 Msa0695130:intron 30.0%
TGCTAAAACTGATGAAGAAA+AGG - chr4_4:64560568-64560587 Msa0695130:intron 30.0%
! AAATTGTGAGTCTTATCTTG+TGG - chr4_4:64560594-64560613 Msa0695130:intron 30.0%
AAAAAACAGAATGCTACAAC+TGG - chr4_4:64560700-64560719 Msa0695130:intron 30.0%
AAAAACAGAATGCTACAACT+GGG - chr4_4:64560701-64560720 Msa0695130:intron 30.0%
CATCGTCAAAATATTATTGC+AGG + chr4_4:64560734-64560753 None:intergenic 30.0%
AATGAGTTATTGCGTATATG+AGG - chr4_4:64560799-64560818 Msa0695130:CDS 30.0%
ATGAGTTATTGCGTATATGA+GGG - chr4_4:64560800-64560819 Msa0695130:CDS 30.0%
CTCTTATCTCCAATAAAAGA+AGG + chr4_4:64560912-64560931 None:intergenic 30.0%
ATAAGAGAATCAACCTTTCT+TGG - chr4_4:64560925-64560944 Msa0695130:intron 30.0%
! GATACAAAGTACTCTCAAAA+GGG + chr4_4:64561046-64561065 None:intergenic 30.0%
! TGATACAAAGTACTCTCAAA+AGG + chr4_4:64561047-64561066 None:intergenic 30.0%
CTTCTTCAATGCAATATTGT+TGG + chr4_4:64561225-64561244 None:intergenic 30.0%
CAACAATATTGCATTGAAGA+AGG - chr4_4:64561223-64561242 Msa0695130:CDS 30.0%
AAGAAGTCCTATTTGTATTC+CGG + chr4_4:64561477-64561496 None:intergenic 30.0%
!!! AGAGGAAGTTTTGATTATAG+AGG - chr4_4:64561522-64561541 Msa0695130:intron 30.0%
CATTCTACAGAAACAAACTT+CGG + chr4_4:64561580-64561599 None:intergenic 30.0%
TTACATGCATACATAACCAA+GGG + chr4_4:64561669-64561688 None:intergenic 30.0%
ATTACATGCATACATAACCA+AGG + chr4_4:64561670-64561689 None:intergenic 30.0%
! TGACAAGTGGATTTATATGA+AGG - chr4_4:64561694-64561713 Msa0695130:five_prime_UTR 30.0%
ACCTGAAACAAAGTGAACAA+GGG + chr4_4:64554119-64554138 None:intergenic 35.0%
GGAAAGAACTTGAAGAACTT+AGG + chr4_4:64554520-64554539 None:intergenic 35.0%
AAGTTCTTTCCTGAACTTTC+CGG - chr4_4:64554529-64554548 Msa0695130:CDS 35.0%
!! TACTCATCTTGATTTGGTTG+AGG - chr4_4:64554564-64554583 Msa0695130:CDS 35.0%
TTCTATTACTGTACAGGTTC+GGG - chr4_4:64554715-64554734 Msa0695130:intron 35.0%
AAGGATACACCTGAGAATAT+TGG - chr4_4:64554771-64554790 Msa0695130:intron 35.0%
ATTCTTGAGAGTTGAGAACA+TGG - chr4_4:64554859-64554878 Msa0695130:CDS 35.0%
TCAAAATTTACCATACTGGC+TGG + chr4_4:64555096-64555115 None:intergenic 35.0%
CAGCTCAAAATTTACCATAC+TGG + chr4_4:64555100-64555119 None:intergenic 35.0%
TTAAGATCAAAGGCAAAGCT+CGG - chr4_4:64555200-64555219 Msa0695130:CDS 35.0%
AGAATAAGAAAGACGCCTTT+CGG + chr4_4:64555325-64555344 None:intergenic 35.0%
! GCTCTTTGGTTTCATGAATA+TGG + chr4_4:64555397-64555416 None:intergenic 35.0%
ATGAAACCAAAGAGCTGATA+TGG - chr4_4:64555402-64555421 Msa0695130:intron 35.0%
TACAACTTTGTCCCTTATAG+TGG - chr4_4:64555661-64555680 Msa0695130:intron 35.0%
!!! CGCTAGTTTTACCACTATAA+GGG + chr4_4:64555675-64555694 None:intergenic 35.0%
CCTTATAGTGGTAAAACTAG+CGG - chr4_4:64555673-64555692 Msa0695130:intron 35.0%
!! GAAACATTTGATTTGAGCCT+TGG - chr4_4:64555982-64556001 Msa0695130:intron 35.0%
! ACTTTGTTTAAGCACATTCG+TGG - chr4_4:64556188-64556207 Msa0695130:CDS 35.0%
! TCAACAGTTCAGCTTTGATA+GGG + chr4_4:64556367-64556386 None:intergenic 35.0%
! TTCAACAGTTCAGCTTTGAT+AGG + chr4_4:64556368-64556387 None:intergenic 35.0%
CAGAGTTTAGAAGATGTAAC+TGG - chr4_4:64556540-64556559 Msa0695130:intron 35.0%
TTTGAGCCTATTTGGAGAAA+AGG - chr4_4:64556599-64556618 Msa0695130:intron 35.0%
CTAATTACCTGGTCAAAAAC+AGG + chr4_4:64557094-64557113 None:intergenic 35.0%
AACCAAACGATCTAATTACC+TGG + chr4_4:64557105-64557124 None:intergenic 35.0%
!! GATCGTTTGGTTTGAATTGT+TGG - chr4_4:64557113-64557132 Msa0695130:intron 35.0%
!! GTTGGTTTGTGCTTGAATAT+TGG - chr4_4:64557131-64557150 Msa0695130:intron 35.0%
!! TACAATTTTGACACGATTCC+AGG + chr4_4:64557437-64557456 None:intergenic 35.0%
AATCGTGTCAAAATTGTAGC+TGG - chr4_4:64557439-64557458 Msa0695130:intron 35.0%
TAAACTAAAGAATCGTAGCC+GGG + chr4_4:64557475-64557494 None:intergenic 35.0%
CTGGTTAACTTCATAGATCT+TGG - chr4_4:64557550-64557569 Msa0695130:intron 35.0%
TTCATAGATCTTGGATTGAC+TGG - chr4_4:64557559-64557578 Msa0695130:intron 35.0%
!! AAATCTACTTTTCGTTCTCC+AGG + chr4_4:64557671-64557690 None:intergenic 35.0%
TTCAGCAACTGAACAATAGA+AGG + chr4_4:64557755-64557774 None:intergenic 35.0%
TTCTATTGTTCAGTTGCTGA+AGG - chr4_4:64557754-64557773 Msa0695130:intron 35.0%
TAAAAAATGGCATGATTGGC+AGG - chr4_4:64557788-64557807 Msa0695130:intron 35.0%
CATAGAGTATACAACTTCCT+AGG + chr4_4:64557929-64557948 None:intergenic 35.0%
ATTGGACCTTCTGAATTAAG+TGG + chr4_4:64558159-64558178 None:intergenic 35.0%
! TTTTTCATGAAAAACCGGGT+TGG - chr4_4:64558381-64558400 Msa0695130:intron 35.0%
AGAAACAGAACATAGTTGCA+AGG + chr4_4:64558552-64558571 None:intergenic 35.0%
TTGGAGGAAATTTGATCTCA+TGG + chr4_4:64558582-64558601 None:intergenic 35.0%
AGATCAAATTTCCTCCAATG+AGG - chr4_4:64558584-64558603 Msa0695130:intron 35.0%
ATCAGAATAACCCACAACTT+GGG - chr4_4:64558660-64558679 Msa0695130:intron 35.0%
TCATAAAGTAACCCTTAACC+CGG - chr4_4:64558697-64558716 Msa0695130:CDS 35.0%
AATGTGAATCAGTGTTCCAA+AGG - chr4_4:64558741-64558760 Msa0695130:intron 35.0%
!! CATTACTTTTGTTGTCAGTG+TGG + chr4_4:64558798-64558817 None:intergenic 35.0%
CTGACAACAAAAGTAATGTC+CGG - chr4_4:64558800-64558819 Msa0695130:intron 35.0%
CTTGATATACTTGAGGAAAC+TGG + chr4_4:64558962-64558981 None:intergenic 35.0%
TAGCTAGATGACAATGTTCT+CGG + chr4_4:64559036-64559055 None:intergenic 35.0%
GCATGTTCAATCACCAAATA+TGG - chr4_4:64559071-64559090 Msa0695130:intron 35.0%
! GTTATGAACCCAACTTTTTG+AGG - chr4_4:64559191-64559210 Msa0695130:CDS 35.0%
AATGTTGCCCTCAAAAAGTT+GGG + chr4_4:64559202-64559221 None:intergenic 35.0%
CTGTTGTTAGTAATCATTGG+AGG - chr4_4:64559262-64559281 Msa0695130:intron 35.0%
! TACATGACTTGGAAGAAAAC+CGG - chr4_4:64559378-64559397 Msa0695130:CDS 35.0%
ATTTCATCACCTAGCTCAAA+AGG - chr4_4:64559443-64559462 Msa0695130:intron 35.0%
! AAAGGTTTACCTTTTGAGCT+AGG + chr4_4:64559455-64559474 None:intergenic 35.0%
ATGCAGCACATAATCAAACT+TGG - chr4_4:64559516-64559535 Msa0695130:intron 35.0%
! CATAAACTATTGGTGGCATT+AGG + chr4_4:64559556-64559575 None:intergenic 35.0%
AATGCCACCAATAGTTTATG+TGG - chr4_4:64559556-64559575 Msa0695130:CDS 35.0%
GTAACCACATAAACTATTGG+TGG + chr4_4:64559563-64559582 None:intergenic 35.0%
! ATTCCAAGACCTTTGAGTTT+AGG - chr4_4:64559858-64559877 Msa0695130:intron 35.0%
! TTCCAAGACCTTTGAGTTTA+GGG - chr4_4:64559859-64559878 Msa0695130:intron 35.0%
ACATACTTTGTTCAACTTGC+TGG + chr4_4:64559908-64559927 None:intergenic 35.0%
TTAAGATTTGAGCATAGCAG+TGG - chr4_4:64559951-64559970 Msa0695130:intron 35.0%
TAAGATTTGAGCATAGCAGT+GGG - chr4_4:64559952-64559971 Msa0695130:intron 35.0%
!! AATCTCGATTTGGTAACCTT+TGG - chr4_4:64560103-64560122 Msa0695130:intron 35.0%
TCGTAAGTGTACAGTAGTTT+GGG - chr4_4:64560292-64560311 Msa0695130:intron 35.0%
GTTTGTATCCATCTTTCCTT+TGG - chr4_4:64560391-64560410 Msa0695130:intron 35.0%
TTAGTTTCTTGATTGTAGCC+CGG + chr4_4:64560511-64560530 None:intergenic 35.0%
CAAGAAACTAACTCAAGGAA+TGG - chr4_4:64560520-64560539 Msa0695130:intron 35.0%
GGCTGAAAACAACAAATCTA+TGG - chr4_4:64560541-64560560 Msa0695130:intron 35.0%
!!! GCAAAAGCACCTTCTTTTAT+TGG - chr4_4:64560900-64560919 Msa0695130:intron 35.0%
AAAATACAATACCCAACAGC+TGG + chr4_4:64560984-64561003 None:intergenic 35.0%
AATATTGTTGGATCCATTGC+CGG + chr4_4:64561213-64561232 None:intergenic 35.0%
TAATTTCATGGAGACTGTAC+CGG - chr4_4:64561455-64561474 Msa0695130:CDS 35.0%
GTACTAAAATTCTTTGGCAG+AGG - chr4_4:64561504-64561523 Msa0695130:exon 35.0%
! TCTTATCCTTTTGATGCAAG+CGG - chr4_4:64561617-64561636 Msa0695130:intron 35.0%
TACATGCATACATAACCAAG+GGG + chr4_4:64561668-64561687 None:intergenic 35.0%
GCATGTAATGTAATGACAAG+TGG - chr4_4:64561681-64561700 Msa0695130:five_prime_UTR 35.0%
! ACCCTTGTTCACTTTGTTTC+AGG - chr4_4:64554115-64554134 Msa0695130:three_prime_UTR 40.0%
GACCTGAAACAAAGTGAACA+AGG + chr4_4:64554120-64554139 None:intergenic 40.0%
TCCTCTATCGCATGCTTATT+TGG - chr4_4:64554200-64554219 Msa0695130:three_prime_UTR 40.0%
ACCAAATAAGCATGCGATAG+AGG + chr4_4:64554204-64554223 None:intergenic 40.0%
ATCGAGAAGCTCTACCAATA+TGG - chr4_4:64554300-64554319 Msa0695130:three_prime_UTR 40.0%
CTCTTCCAAAGACAAATCTC+AGG - chr4_4:64554335-64554354 Msa0695130:exon 40.0%
! TCAATTTTCGCAGAACGTCA+AGG - chr4_4:64554426-64554445 Msa0695130:CDS 40.0%
CAGAACGTCAAGGATTATCA+AGG - chr4_4:64554436-64554455 Msa0695130:CDS 40.0%
!! ATGAGTATTGAGTGCAAGAC+CGG + chr4_4:64554551-64554570 None:intergenic 40.0%
TCTTGTGCAACTTCTTTCCT+CGG - chr4_4:64554809-64554828 Msa0695130:CDS 40.0%
AATAAACCACAACTTACCCG+AGG + chr4_4:64554829-64554848 None:intergenic 40.0%
GATTTCATTACCAGCCAGTA+TGG - chr4_4:64555083-64555102 Msa0695130:intron 40.0%
AAATGTTTGAGGAGGTCTTC+CGG + chr4_4:64555248-64555267 None:intergenic 40.0%
GAATAAGAAAGACGCCTTTC+GGG + chr4_4:64555324-64555343 None:intergenic 40.0%
!!! CCGCTAGTTTTACCACTATA+AGG + chr4_4:64555676-64555695 None:intergenic 40.0%
CTGCAAGAGATCATCTATAC+TGG + chr4_4:64555913-64555932 None:intergenic 40.0%
!! TCTCTTGCAGCTTGTTAATG+TGG - chr4_4:64555923-64555942 Msa0695130:intron 40.0%
AAGGTGAGAAACCATGTGAT+TGG - chr4_4:64556274-64556293 Msa0695130:intron 40.0%
AATGGAGTTTATGCATGCTG+TGG - chr4_4:64556509-64556528 Msa0695130:intron 40.0%
CAAATAGGCTCAAACTCTTC+AGG + chr4_4:64556593-64556612 None:intergenic 40.0%
CTGAAGAGTTTGAGCCTATT+TGG - chr4_4:64556591-64556610 Msa0695130:intron 40.0%
GTTGATATCATGCCTTCACA+TGG - chr4_4:64556917-64556936 Msa0695130:intron 40.0%
GACCAGGTAATTAGATCGTT+TGG - chr4_4:64557100-64557119 Msa0695130:intron 40.0%
CTTGGATTGACTGGTAAATG+TGG - chr4_4:64557568-64557587 Msa0695130:intron 40.0%
TGAAAGGTGAAAACTCTGCA+AGG + chr4_4:64557703-64557722 None:intergenic 40.0%
!! GAATCTTGTGGTGTTGTGAA+AGG + chr4_4:64557719-64557738 None:intergenic 40.0%
AGCATTTGTCGTGAATCTTG+TGG + chr4_4:64557731-64557750 None:intergenic 40.0%
TTACAGATAGATTCAACCCG+AGG - chr4_4:64558058-64558077 Msa0695130:CDS 40.0%
TACTAAGTGTCTGTTTGGAG+TGG + chr4_4:64558251-64558270 None:intergenic 40.0%
ACTCAAATTAGGAGACGTCA+AGG + chr4_4:64558452-64558471 None:intergenic 40.0%
!! CGTCTCCTAATTTGAGTTGT+TGG - chr4_4:64558455-64558474 Msa0695130:intron 40.0%
AGAAGCAGAATGTTGTGCTA+TGG + chr4_4:64558521-64558540 None:intergenic 40.0%
! GGGTTATTCTGATGCTGATT+GGG + chr4_4:64558653-64558672 None:intergenic 40.0%
TGGGTTATTCTGATGCTGAT+TGG + chr4_4:64558654-64558673 None:intergenic 40.0%
CATCAGAATAACCCACAACT+TGG - chr4_4:64558659-64558678 Msa0695130:intron 40.0%
AAAGGTAACACCCAAGTTGT+GGG + chr4_4:64558673-64558692 None:intergenic 40.0%
TAAAGATTGCACCGGGTTAA+GGG + chr4_4:64558711-64558730 None:intergenic 40.0%
ATAAAGATTGCACCGGGTTA+AGG + chr4_4:64558712-64558731 None:intergenic 40.0%
TTAATTACCTCACAGTGACC+AGG + chr4_4:64558826-64558845 None:intergenic 40.0%
TCAAGCTACTACTAGGTCAA+GGG + chr4_4:64558895-64558914 None:intergenic 40.0%
GAACATTGTCATCTAGCTAG+TGG - chr4_4:64559037-64559056 Msa0695130:intron 40.0%
CAATGTTGCCCTCAAAAAGT+TGG + chr4_4:64559203-64559222 None:intergenic 40.0%
! GATGATTTTACCGAGAGGTA+TGG - chr4_4:64559640-64559659 Msa0695130:intron 40.0%
! GTAGTACGCACATGTCATTT+AGG - chr4_4:64559737-64559756 Msa0695130:intron 40.0%
GGATAAAAAATGTTGAGGGG+AGG - chr4_4:64559758-64559777 Msa0695130:intron 40.0%
AAAAATGTTGAGGGGAGGTT+AGG - chr4_4:64559763-64559782 Msa0695130:intron 40.0%
GAAGCCTTTGTGAAGGTTTA+CGG - chr4_4:64559793-64559812 Msa0695130:intron 40.0%
ACAACCGTAAACCTTCACAA+AGG + chr4_4:64559800-64559819 None:intergenic 40.0%
ACTCAAAGGTCTTGGAATCT+TGG + chr4_4:64559856-64559875 None:intergenic 40.0%
TACCCTAAACTCAAAGGTCT+TGG + chr4_4:64559864-64559883 None:intergenic 40.0%
TCAAATCTTAAGCCCTTGTC+CGG + chr4_4:64559942-64559961 None:intergenic 40.0%
TTGCAGATCGCGAAAATTAG+AGG + chr4_4:64560043-64560062 None:intergenic 40.0%
!! CGATTTGGTAACCTTTGGTA+TGG - chr4_4:64560108-64560127 Msa0695130:intron 40.0%
TGTAAACCAGACCATACCAA+AGG + chr4_4:64560122-64560141 None:intergenic 40.0%
!!! AATGCCGACACTTGTTTTTG+AGG - chr4_4:64560225-64560244 Msa0695130:intron 40.0%
!!! ATGCCGACACTTGTTTTTGA+GGG - chr4_4:64560226-64560245 Msa0695130:intron 40.0%
CTCGTAAGTGTACAGTAGTT+TGG - chr4_4:64560291-64560310 Msa0695130:intron 40.0%
AAGTGTACAGTAGTTTGGGA+TGG - chr4_4:64560296-64560315 Msa0695130:intron 40.0%
GATGGTGAAAGCTCTTGATT+TGG - chr4_4:64560314-64560333 Msa0695130:intron 40.0%
AGGAAAGATGGATACAAACG+AGG + chr4_4:64560390-64560409 None:intergenic 40.0%
!! ATCTTTCCTTTGGGATTTGC+CGG - chr4_4:64560401-64560420 Msa0695130:intron 40.0%
CTCCAGATTGAAAAACGTTG+AGG - chr4_4:64560478-64560497 Msa0695130:intron 40.0%
!! CTCCTCAACGTTTTTCAATC+TGG + chr4_4:64560483-64560502 None:intergenic 40.0%
TAGTTTCTTGATTGTAGCCC+GGG + chr4_4:64560510-64560529 None:intergenic 40.0%
TGGTTGCTTCTTTCCAAGAA+AGG + chr4_4:64560941-64560960 None:intergenic 40.0%
TTACTTCTGCAGAGCGAAAA+CGG - chr4_4:64561177-64561196 Msa0695130:intron 40.0%
! CAACTTGTCAATAGAGCACT+AGG - chr4_4:64561272-64561291 Msa0695130:CDS 40.0%
GACTGTACCGGAATACAAAT+AGG - chr4_4:64561467-64561486 Msa0695130:CDS 40.0%
! CTTATCCTTTTGATGCAAGC+GGG - chr4_4:64561618-64561637 Msa0695130:intron 40.0%
CATTGGAAGCTTCTTCGTTC+TGG + chr4_4:64554250-64554269 None:intergenic 45.0%
TCGGAAGGTTCAGTAGTCAT+TGG + chr4_4:64554267-64554286 None:intergenic 45.0%
ATGTAAGCAGCTTCTTCGGA+AGG + chr4_4:64554282-64554301 None:intergenic 45.0%
CTCGATGTAAGCAGCTTCTT+CGG + chr4_4:64554286-64554305 None:intergenic 45.0%
! AGTTGAGTTGCTCGCCATAT+TGG + chr4_4:64554317-64554336 None:intergenic 45.0%
TTGGTTGAGGCTGATGAACT+CGG - chr4_4:64554577-64554596 Msa0695130:intron 45.0%
GTGTATCCTTGCAGAAAGAG+AGG + chr4_4:64554761-64554780 None:intergenic 45.0%
CTTGTGCAACTTCTTTCCTC+GGG - chr4_4:64554810-64554829 Msa0695130:CDS 45.0%
TTCTTTCCTCGGGTAAGTTG+TGG - chr4_4:64554820-64554839 Msa0695130:CDS 45.0%
CAAAGCTCGGTTGTTGCATA+GGG - chr4_4:64555213-64555232 Msa0695130:CDS 45.0%
AACCAAAGAGCTGATATGGC+TGG - chr4_4:64555406-64555425 Msa0695130:intron 45.0%
TGTTAATGTGGTGACTGCCA+AGG - chr4_4:64555935-64555954 Msa0695130:intron 45.0%
ACTACCACTTAAAGGCTCCT+TGG + chr4_4:64555955-64555974 None:intergenic 45.0%
GGATGACCTTAGTCGTGAAA+AGG - chr4_4:64556231-64556250 Msa0695130:intron 45.0%
TGTCGTTCCATTTCCTCTTG+GGG + chr4_4:64556392-64556411 None:intergenic 45.0%
! GTGTCGTTCCATTTCCTCTT+GGG + chr4_4:64556393-64556412 None:intergenic 45.0%
! TGTGTCGTTCCATTTCCTCT+TGG + chr4_4:64556394-64556413 None:intergenic 45.0%
! CTGGAGCCTTTTCTCCAAAT+AGG + chr4_4:64556608-64556627 None:intergenic 45.0%
GAGCTGCTTGGAATCATTGA+AGG - chr4_4:64556642-64556661 Msa0695130:intron 45.0%
!! CAATTGGAAGTGCCATGTGA+AGG + chr4_4:64556932-64556951 None:intergenic 45.0%
CATGGCACTTCCAATTGTTG+TGG - chr4_4:64556935-64556954 Msa0695130:intron 45.0%
TGTCGATAGCGACACTATTG+CGG - chr4_4:64557340-64557359 Msa0695130:intron 45.0%
ACTATTGCGGAATAGCGTGA+CGG - chr4_4:64557353-64557372 Msa0695130:intron 45.0%
TTCAACAGTCTTGGCAGTTG+CGG - chr4_4:64557411-64557430 Msa0695130:intron 45.0%
TAAAGAATCGTAGCCGGGAA+AGG + chr4_4:64557470-64557489 None:intergenic 45.0%
!! TAAGGGACTTGGTGTCTGTT+TGG - chr4_4:64558086-64558105 Msa0695130:CDS 45.0%
!! GACTTGGTGTCTGTTTGGAT+GGG - chr4_4:64558091-64558110 Msa0695130:intron 45.0%
! TTCATGAAAAACCGGGTTGG+AGG - chr4_4:64558384-64558403 Msa0695130:intron 45.0%
ACTACATATTGCCTCCAACC+CGG + chr4_4:64558398-64558417 None:intergenic 45.0%
CAGATAGAAGGTCCACTTAC+GGG + chr4_4:64558618-64558637 None:intergenic 45.0%
GCAGATAGAAGGTCCACTTA+CGG + chr4_4:64558619-64558638 None:intergenic 45.0%
TAAGTGGACCTTCTATCTGC+TGG - chr4_4:64558619-64558638 Msa0695130:intron 45.0%
! TATTCTGATGCTGATTGGGC+AGG + chr4_4:64558649-64558668 None:intergenic 45.0%
CAAAGGTAACACCCAAGTTG+TGG + chr4_4:64558674-64558693 None:intergenic 45.0%
GTGTTCCAAAGGTCATCACA+TGG - chr4_4:64558752-64558771 Msa0695130:intron 45.0%
ATGCTCCATGTGATGACCTT+TGG + chr4_4:64558760-64558779 None:intergenic 45.0%
AACAAAAGTAATGTCCGGCC+TGG - chr4_4:64558805-64558824 Msa0695130:intron 45.0%
GGTCAATATCGACGTCTAGT+TGG + chr4_4:64558854-64558873 None:intergenic 45.0%
ACTAGACGTCGATATTGACC+AGG - chr4_4:64558854-64558873 Msa0695130:CDS 45.0%
CTAGACGTCGATATTGACCA+GGG - chr4_4:64558855-64558874 Msa0695130:CDS 45.0%
TATTGACCAGGGTCGTTCAA+TGG - chr4_4:64558866-64558885 Msa0695130:CDS 45.0%
CAAGCTACTACTAGGTCAAG+GGG + chr4_4:64558894-64558913 None:intergenic 45.0%
GTCAAGCTACTACTAGGTCA+AGG + chr4_4:64558896-64558915 None:intergenic 45.0%
ACCTAGTAGTAGCTTGACGT+TGG - chr4_4:64558898-64558917 Msa0695130:intron 45.0%
CCTAGTAGTAGCTTGACGTT+GGG - chr4_4:64558899-64558918 Msa0695130:intron 45.0%
TTGACCTAGTGACACTCCTA+TGG + chr4_4:64558927-64558946 None:intergenic 45.0%
TTACTGGTCAGCCATCTGAT+AGG - chr4_4:64559590-64559609 Msa0695130:intron 45.0%
TCTTCTCCAAGCCTATCAGA+TGG + chr4_4:64559604-64559623 None:intergenic 45.0%
TCATGCAGAAGCCTTTGTGA+AGG - chr4_4:64559786-64559805 Msa0695130:intron 45.0%
CAAAGGTCTTGGAATCTTGG+CGG + chr4_4:64559853-64559872 None:intergenic 45.0%
AAGTATGTTGTCAAAGGGGC+CGG - chr4_4:64559920-64559939 Msa0695130:intron 45.0%
CAGTGGGTAGTACTAAGTGT+TGG - chr4_4:64559968-64559987 Msa0695130:intron 45.0%
TGGTAACCTTTGGTATGGTC+TGG - chr4_4:64560113-64560132 Msa0695130:intron 45.0%
CGACCCTCAAAAACAAGTGT+CGG + chr4_4:64560232-64560251 None:intergenic 45.0%
CTACTGTACACTTACGAGAC+AGG + chr4_4:64560289-64560308 None:intergenic 45.0%
GGCAAATCCCAAAGGAAAGA+TGG + chr4_4:64560402-64560421 None:intergenic 45.0%
AAATGACCGGCAAATCCCAA+AGG + chr4_4:64560410-64560429 None:intergenic 45.0%
! TTGGGATTTGCCGGTCATTT+TGG - chr4_4:64560410-64560429 Msa0695130:intron 45.0%
!! TGGGATTTGCCGGTCATTTT+GGG - chr4_4:64560411-64560430 Msa0695130:intron 45.0%
AAAACGTTGAGGAGTTCACC+CGG - chr4_4:64560489-64560508 Msa0695130:intron 45.0%
! TGCGGTAGTTGATGCAGATT+TGG + chr4_4:64560961-64560980 None:intergenic 45.0%
ATTGCATTGAAGAAGGGTCG+AGG - chr4_4:64561230-64561249 Msa0695130:CDS 45.0%
! CTTGTCAATAGAGCACTAGG+CGG - chr4_4:64561275-64561294 Msa0695130:CDS 45.0%
TGATTCCCGCTTGCATCAAA+AGG + chr4_4:64561626-64561645 None:intergenic 45.0%
ACTGAACATCTTATGCCCCT+TGG - chr4_4:64561650-64561669 Msa0695130:five_prime_UTR 45.0%
!!! TTTTGTATTTTTTTTTTTTT+TGG - chr4_4:64554687-64554706 Msa0695130:intron 5.0%
!! AACATATAATTTATATTATA+CGG + chr4_4:64555870-64555889 None:intergenic 5.0%
!!! TTTAATCTTTTATTTTATTA+TGG - chr4_4:64560637-64560656 Msa0695130:intron 5.0%
!!! TTAATCTTTTATTTTATTAT+GGG - chr4_4:64560638-64560657 Msa0695130:intron 5.0%
AGTGCAAGACCGGAAAGTTC+AGG + chr4_4:64554541-64554560 None:intergenic 50.0%
TGGTTGAGGCTGATGAACTC+GGG - chr4_4:64554578-64554597 Msa0695130:intron 50.0%
GCAAAGCTCGGTTGTTGCAT+AGG - chr4_4:64555212-64555231 Msa0695130:CDS 50.0%
! AAGAAAGACGCCTTTCGGGT+GGG + chr4_4:64555320-64555339 None:intergenic 50.0%
TAAGAAAGACGCCTTTCGGG+TGG + chr4_4:64555321-64555340 None:intergenic 50.0%
TGCCAGCCATATCAGCTCTT+TGG + chr4_4:64555411-64555430 None:intergenic 50.0%
ACTGCCAAGGAGCCTTTAAG+TGG - chr4_4:64555948-64555967 Msa0695130:intron 50.0%
TGAACTGTTGAAGCCCCAAG+AGG - chr4_4:64556376-64556395 Msa0695130:CDS 50.0%
GTTGAAGCCCCAAGAGGAAA+TGG - chr4_4:64556382-64556401 Msa0695130:intron 50.0%
CTATTGCGGAATAGCGTGAC+GGG - chr4_4:64557354-64557373 Msa0695130:intron 50.0%
! CAGGCATAAGGTGTCCCAAT+GGG + chr4_4:64557382-64557401 None:intergenic 50.0%
CTAGGCGTCTTCAACAGTCT+TGG - chr4_4:64557402-64557421 Msa0695130:intron 50.0%
GTAGCTGGAAAGACCTTTCC+CGG - chr4_4:64557454-64557473 Msa0695130:intron 50.0%
TGTTATTCCTGCCAGCTTCC+TGG - chr4_4:64557650-64557669 Msa0695130:intron 50.0%
! CTTTTCGTTCTCCAGGAAGC+TGG + chr4_4:64557664-64557683 None:intergenic 50.0%
TCTAACACTCCTCCTCAAGC+TGG - chr4_4:64558007-64558026 Msa0695130:CDS 50.0%
ATGTATGCTCCAGCTTGAGG+AGG + chr4_4:64558019-64558038 None:intergenic 50.0%
GACATGTATGCTCCAGCTTG+AGG + chr4_4:64558022-64558041 None:intergenic 50.0%
ATTCAACCCGAGGTCCTCTA+AGG - chr4_4:64558068-64558087 Msa0695130:CDS 50.0%
TTCAACCCGAGGTCCTCTAA+GGG - chr4_4:64558069-64558088 Msa0695130:CDS 50.0%
ACAGACACCAAGTCCCTTAG+AGG + chr4_4:64558085-64558104 None:intergenic 50.0%
!! GGACTTGGTGTCTGTTTGGA+TGG - chr4_4:64558090-64558109 Msa0695130:CDS 50.0%
! TTGGTGTCTGTTTGGATGGG+TGG - chr4_4:64558094-64558113 Msa0695130:intron 50.0%
! TACGGGTGTTGTGTCCTCAT+TGG + chr4_4:64558601-64558620 None:intergenic 50.0%
CAGGTTCACCAGCAGATAGA+AGG + chr4_4:64558630-64558649 None:intergenic 50.0%
CCCAACGTCAAGCTACTACT+AGG + chr4_4:64558902-64558921 None:intergenic 50.0%
AGCTTGACGTTGGGATCCAT+AGG - chr4_4:64558908-64558927 Msa0695130:intron 50.0%
!! GGATCCATAGGAGTGTCACT+AGG - chr4_4:64558920-64558939 Msa0695130:intron 50.0%
GCGGTGGTCCTTCATTAGTA+TGG + chr4_4:64559834-64559853 None:intergenic 50.0%
! TGCCATAGTGCTGCTGCTAT+TGG + chr4_4:64559994-64560013 None:intergenic 50.0%
AAACGTTGAGGAGTTCACCC+GGG - chr4_4:64560490-64560509 Msa0695130:intron 50.0%
!!! GAAGGTGCTTTTGCGTGCAA+TGG + chr4_4:64560894-64560913 None:intergenic 50.0%
ACAATACCCAACAGCTGGTG+CGG + chr4_4:64560979-64560998 None:intergenic 50.0%
TTGAAGAAGGGTCGAGGTTC+TGG - chr4_4:64561236-64561255 Msa0695130:CDS 50.0%
!! AGAGCACTAGGCGGATTATC+TGG - chr4_4:64561284-64561303 Msa0695130:CDS 50.0%
AGAGGAAGTGGAAGAGGTAG+AGG - chr4_4:64561386-64561405 Msa0695130:intron 50.0%
AGTGGAAGAGGTAGAGGTAG+AGG - chr4_4:64561392-64561411 Msa0695130:intron 50.0%
GTGGAAGAGGTAGAGGTAGA+GGG - chr4_4:64561393-64561412 Msa0695130:intron 50.0%
! GAGGTAGAGGTAGAGGGTAT+TGG - chr4_4:64561399-64561418 Msa0695130:intron 50.0%
GGTTGAGGCTGATGAACTCG+GGG - chr4_4:64554579-64554598 Msa0695130:intron 55.0%
GTTCGGGTGCAAGCGATAAG+AGG - chr4_4:64554731-64554750 Msa0695130:intron 55.0%
GGACTGCCTCTCTTTCTGCA+AGG - chr4_4:64554752-64554771 Msa0695130:intron 55.0%
GGAGCGTGATGCTGTGCATA+AGG - chr4_4:64554932-64554951 Msa0695130:intron 55.0%
! AGGCTCTGATGTCTCTGCTG+AGG - chr4_4:64554952-64554971 Msa0695130:intron 55.0%
TCTGATGTCTCTGCTGAGGC+AGG - chr4_4:64554956-64554975 Msa0695130:intron 55.0%
CTGCTGAGGCAGGATGTGAA+AGG - chr4_4:64554966-64554985 Msa0695130:intron 55.0%
TTGCATAGGGATGCCACAGC+CGG - chr4_4:64555226-64555245 Msa0695130:CDS 55.0%
! AGAAAGACGCCTTTCGGGTG+GGG + chr4_4:64555319-64555338 None:intergenic 55.0%
AAAGGCTCCAGCTGAGCGTA+TGG - chr4_4:64556617-64556636 Msa0695130:intron 55.0%
AGCTCTTCCATACGCTCAGC+TGG + chr4_4:64556627-64556646 None:intergenic 55.0%
GAGCGTATGGAAGAGCTGCT+TGG - chr4_4:64556630-64556649 Msa0695130:intron 55.0%
! GCAGGCATAAGGTGTCCCAA+TGG + chr4_4:64557383-64557402 None:intergenic 55.0%
TGGGACACCTTATGCCTGCT+AGG - chr4_4:64557384-64557403 Msa0695130:intron 55.0%
GAAGACGCCTAGCAGGCATA+AGG + chr4_4:64557394-64557413 None:intergenic 55.0%
GACTGTTGAAGACGCCTAGC+AGG + chr4_4:64557401-64557420 None:intergenic 55.0%
CAAGTCCCTTAGAGGACCTC+GGG + chr4_4:64558077-64558096 None:intergenic 55.0%
CCAAGTCCCTTAGAGGACCT+CGG + chr4_4:64558078-64558097 None:intergenic 55.0%
! GGGTGTTGTGTCCTCATTGG+AGG + chr4_4:64558598-64558617 None:intergenic 55.0%
GAGGACACAACACCCGTAAG+TGG - chr4_4:64558603-64558622 Msa0695130:intron 55.0%
TTACCTCACAGTGACCAGGC+CGG + chr4_4:64558822-64558841 None:intergenic 55.0%
GGTCAGCCATCTGATAGGCT+TGG - chr4_4:64559595-64559614 Msa0695130:intron 55.0%
AGGTCTTGGAATCTTGGCGG+TGG + chr4_4:64559850-64559869 None:intergenic 55.0%
TTGTCAAAGGGGCCGGACAA+GGG - chr4_4:64559927-64559946 Msa0695130:intron 55.0%
GGCCAATAGCAGCAGCACTA+TGG - chr4_4:64559989-64560008 Msa0695130:intron 55.0%
! GTGCTTTTGCGTGCAATGGC+TGG + chr4_4:64560890-64560909 None:intergenic 55.0%
TCAACTACCGCACCAGCTGT+TGG - chr4_4:64560969-64560988 Msa0695130:CDS 55.0%
CAACTACCGCACCAGCTGTT+GGG - chr4_4:64560970-64560989 Msa0695130:CDS 55.0%
TTCTGCAGAGCGAAAACGGC+CGG - chr4_4:64561181-64561200 Msa0695130:intron 55.0%
GATCCATTGCCGGTAGTAGC+CGG + chr4_4:64561203-64561222 None:intergenic 55.0%
! AAGAAGGGTCGAGGTTCTGG+TGG - chr4_4:64561239-64561258 Msa0695130:CDS 55.0%
!! GCACTAGGCGGATTATCTGG+TGG - chr4_4:64561287-64561306 Msa0695130:CDS 55.0%
!! CTAGGCGGATTATCTGGTGG+AGG - chr4_4:64561290-64561309 Msa0695130:CDS 55.0%
TGGAGGAAGAGCAGAGTCTC+TGG - chr4_4:64561307-64561326 Msa0695130:CDS 55.0%
AGGAAGAGCAGAGTCTCTGG+TGG - chr4_4:64561310-64561329 Msa0695130:CDS 55.0%
AAGAGCAGAGTCTCTGGTGG+AGG - chr4_4:64561313-64561332 Msa0695130:CDS 55.0%
AGAGTCTCTGGTGGAGGTAG+AGG - chr4_4:64561319-64561338 Msa0695130:intron 55.0%
TGGAGGTAGAGGTGGAGCAA+GGG - chr4_4:64561330-64561349 Msa0695130:intron 55.0%
TTGAGGAGGTCTTCCGGCTG+TGG + chr4_4:64555242-64555261 None:intergenic 60.0%
GGGGAGCTAGCACTCGTGAT+TGG + chr4_4:64555283-64555302 None:intergenic 60.0%
! AAAGACGCCTTTCGGGTGGG+GGG + chr4_4:64555317-64555336 None:intergenic 60.0%
! GAAAGACGCCTTTCGGGTGG+GGG + chr4_4:64555318-64555337 None:intergenic 60.0%
!! ATAGCGTGACGGGCTCCCAT+TGG - chr4_4:64557364-64557383 Msa0695130:intron 60.0%
!! TAGCGTGACGGGCTCCCATT+GGG - chr4_4:64557365-64557384 Msa0695130:intron 60.0%
TCGTTCTCCAGGAAGCTGGC+AGG + chr4_4:64557660-64557679 None:intergenic 60.0%
! CCGAGGTCCTCTAAGGGACT+TGG - chr4_4:64558075-64558094 Msa0695130:CDS 60.0%
GTTGTCAAAGGGGCCGGACA+AGG - chr4_4:64559926-64559945 Msa0695130:intron 60.0%
CGAAAACGGCCGGCTACTAC+CGG - chr4_4:64561191-64561210 Msa0695130:intron 60.0%
GTCTCTGGTGGAGGTAGAGG+TGG - chr4_4:64561322-64561341 Msa0695130:intron 60.0%
GTGGAGGTAGAGGTGGAGCA+AGG - chr4_4:64561329-64561348 Msa0695130:intron 60.0%
GGAGGTAGAGGTGGAGCAAG+GGG - chr4_4:64561331-64561350 Msa0695130:intron 60.0%
CGCGGAAGAGGAAGTGGAAG+AGG - chr4_4:64561380-64561399 Msa0695130:intron 60.0%
!! GTGGGGGGGCTTTGGCTTTG+GGG + chr4_4:64555302-64555321 None:intergenic 65.0%
!! GGTGGGGGGGCTTTGGCTTT+GGG + chr4_4:64555303-64555322 None:intergenic 65.0%
! AAGACGCCTTTCGGGTGGGG+GGG + chr4_4:64555316-64555335 None:intergenic 65.0%
CAGTCTTGGCAGTTGCGGCC+TGG - chr4_4:64557416-64557435 Msa0695130:intron 65.0%
TGTCCGGCCTGGTCACTGTG+AGG - chr4_4:64558816-64558835 Msa0695130:intron 65.0%
GGGGAGCCATTGAACGACCC+TGG + chr4_4:64558875-64558894 None:intergenic 65.0%
GGTAGAGGTGGAGCAAGGGG+CGG - chr4_4:64561334-64561353 Msa0695130:intron 65.0%
GTAGAGGTGGAGCAAGGGGC+GGG - chr4_4:64561335-64561354 Msa0695130:intron 65.0%
TAGAGGTGGAGCAAGGGGCG+GGG - chr4_4:64561336-64561355 Msa0695130:intron 65.0%
GGTGGTCGCGGAAGAGGAAG+TGG - chr4_4:64561374-64561393 Msa0695130:intron 65.0%
! GGGTGGGGGGGCTTTGGCTT+TGG + chr4_4:64555304-64555323 None:intergenic 70.0%
! CCTTTCGGGTGGGGGGGCTT+TGG + chr4_4:64555310-64555329 None:intergenic 70.0%
CCAAAGCCCCCCCACCCGAA+AGG - chr4_4:64555307-64555326 Msa0695130:intron 70.0%
CGGCCGGCTACTACCGGCAA+TGG - chr4_4:64561197-64561216 Msa0695130:CDS 70.0%
TGGAGCAAGGGGCGGGGCCA+GGG - chr4_4:64561342-64561361 Msa0695130:intron 75.0%
CTTCCGCGACCACCCCAGCC+TGG + chr4_4:64561368-64561387 None:intergenic 75.0%
GGCTGGGGTGGTCGCGGAAG+AGG - chr4_4:64561368-64561387 Msa0695130:intron 75.0%
! GTGGAGCAAGGGGCGGGGCC+AGG - chr4_4:64561341-64561360 Msa0695130:intron 80.0%
! CGACCACCCCAGCCTGGCCC+TGG + chr4_4:64561362-64561381 None:intergenic 80.0%
! GGGCCAGGCTGGGGTGGTCG+CGG - chr4_4:64561362-64561381 Msa0695130:intron 80.0%
! CAAGGGGCGGGGCCAGGGCC+AGG - chr4_4:64561347-64561366 Msa0695130:intron 85.0%
! GGCGGGGCCAGGGCCAGGCT+GGG - chr4_4:64561352-64561371 Msa0695130:intron 85.0%
! GCGGGGCCAGGGCCAGGCTG+GGG - chr4_4:64561353-64561372 Msa0695130:intron 85.0%
! GGGCCAGGGCCAGGCTGGGG+TGG - chr4_4:64561356-64561375 Msa0695130:intron 85.0%
! GGGCGGGGCCAGGGCCAGGC+TGG - chr4_4:64561351-64561370 Msa0695130:intron 90.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 64553994 64561780 64553994 ID=Msa0695130;Name=Msa0695130
chr4_4 mRNA 64553994 64561780 64553994 ID=Msa0695130-mRNA-1;Parent=Msa0695130;Name=Msa0695130-mRNA-1;_AED=0.10;_eAED=0.10;_QI=159|0.77|0.68|1|0.77|0.68|19|356|550
chr4_4 exon 64553994 64554585 64553994 ID=Msa0695130-mRNA-1:exon:18531;Parent=Msa0695130-mRNA-1
chr4_4 exon 64554721 64554748 64554721 ID=Msa0695130-mRNA-1:exon:18530;Parent=Msa0695130-mRNA-1
chr4_4 exon 64554788 64554883 64554788 ID=Msa0695130-mRNA-1:exon:18529;Parent=Msa0695130-mRNA-1
chr4_4 exon 64555015 64555080 64555015 ID=Msa0695130-mRNA-1:exon:18528;Parent=Msa0695130-mRNA-1
chr4_4 exon 64555176 64555290 64555176 ID=Msa0695130-mRNA-1:exon:18527;Parent=Msa0695130-mRNA-1
chr4_4 exon 64556118 64556224 64556118 ID=Msa0695130-mRNA-1:exon:18526;Parent=Msa0695130-mRNA-1
chr4_4 exon 64556310 64556399 64556310 ID=Msa0695130-mRNA-1:exon:18525;Parent=Msa0695130-mRNA-1
chr4_4 exon 64557999 64558109 64557999 ID=Msa0695130-mRNA-1:exon:18524;Parent=Msa0695130-mRNA-1
chr4_4 exon 64558669 64558734 64558669 ID=Msa0695130-mRNA-1:exon:18523;Parent=Msa0695130-mRNA-1
chr4_4 exon 64558818 64558892 64558818 ID=Msa0695130-mRNA-1:exon:18522;Parent=Msa0695130-mRNA-1
chr4_4 exon 64559082 64559231 64559082 ID=Msa0695130-mRNA-1:exon:18521;Parent=Msa0695130-mRNA-1
chr4_4 exon 64559341 64559415 64559341 ID=Msa0695130-mRNA-1:exon:18520;Parent=Msa0695130-mRNA-1
chr4_4 exon 64559498 64559504 64559498 ID=Msa0695130-mRNA-1:exon:18519;Parent=Msa0695130-mRNA-1
chr4_4 exon 64559522 64559597 64559522 ID=Msa0695130-mRNA-1:exon:18518;Parent=Msa0695130-mRNA-1
chr4_4 exon 64560787 64560852 64560787 ID=Msa0695130-mRNA-1:exon:18517;Parent=Msa0695130-mRNA-1
chr4_4 exon 64560943 64561000 64560943 ID=Msa0695130-mRNA-1:exon:18516;Parent=Msa0695130-mRNA-1
chr4_4 exon 64561195 64561335 64561195 ID=Msa0695130-mRNA-1:exon:18515;Parent=Msa0695130-mRNA-1
chr4_4 exon 64561418 64561523 64561418 ID=Msa0695130-mRNA-1:exon:18514;Parent=Msa0695130-mRNA-1
chr4_4 exon 64561638 64561780 64561638 ID=Msa0695130-mRNA-1:exon:18513;Parent=Msa0695130-mRNA-1
chr4_4 five_prime_UTR 64561638 64561780 64561638 ID=Msa0695130-mRNA-1:five_prime_utr;Parent=Msa0695130-mRNA-1
chr4_4 five_prime_UTR 64561508 64561523 64561508 ID=Msa0695130-mRNA-1:five_prime_utr;Parent=Msa0695130-mRNA-1
chr4_4 CDS 64561418 64561507 64561418 ID=Msa0695130-mRNA-1:cds;Parent=Msa0695130-mRNA-1
chr4_4 CDS 64561195 64561335 64561195 ID=Msa0695130-mRNA-1:cds;Parent=Msa0695130-mRNA-1
chr4_4 CDS 64560943 64561000 64560943 ID=Msa0695130-mRNA-1:cds;Parent=Msa0695130-mRNA-1
chr4_4 CDS 64560787 64560852 64560787 ID=Msa0695130-mRNA-1:cds;Parent=Msa0695130-mRNA-1
chr4_4 CDS 64559522 64559597 64559522 ID=Msa0695130-mRNA-1:cds;Parent=Msa0695130-mRNA-1
chr4_4 CDS 64559498 64559504 64559498 ID=Msa0695130-mRNA-1:cds;Parent=Msa0695130-mRNA-1
chr4_4 CDS 64559341 64559415 64559341 ID=Msa0695130-mRNA-1:cds;Parent=Msa0695130-mRNA-1
chr4_4 CDS 64559082 64559231 64559082 ID=Msa0695130-mRNA-1:cds;Parent=Msa0695130-mRNA-1
chr4_4 CDS 64558818 64558892 64558818 ID=Msa0695130-mRNA-1:cds;Parent=Msa0695130-mRNA-1
chr4_4 CDS 64558669 64558734 64558669 ID=Msa0695130-mRNA-1:cds;Parent=Msa0695130-mRNA-1
chr4_4 CDS 64557999 64558109 64557999 ID=Msa0695130-mRNA-1:cds;Parent=Msa0695130-mRNA-1
chr4_4 CDS 64556310 64556399 64556310 ID=Msa0695130-mRNA-1:cds;Parent=Msa0695130-mRNA-1
chr4_4 CDS 64556118 64556224 64556118 ID=Msa0695130-mRNA-1:cds;Parent=Msa0695130-mRNA-1
chr4_4 CDS 64555176 64555290 64555176 ID=Msa0695130-mRNA-1:cds;Parent=Msa0695130-mRNA-1
chr4_4 CDS 64555015 64555080 64555015 ID=Msa0695130-mRNA-1:cds;Parent=Msa0695130-mRNA-1
chr4_4 CDS 64554788 64554883 64554788 ID=Msa0695130-mRNA-1:cds;Parent=Msa0695130-mRNA-1
chr4_4 CDS 64554721 64554748 64554721 ID=Msa0695130-mRNA-1:cds;Parent=Msa0695130-mRNA-1
chr4_4 CDS 64554350 64554585 64554350 ID=Msa0695130-mRNA-1:cds;Parent=Msa0695130-mRNA-1
chr4_4 three_prime_UTR 64553994 64554349 64553994 ID=Msa0695130-mRNA-1:three_prime_utr;Parent=Msa0695130-mRNA-1
Gene Sequence

>Msa0695130

ATGACTACTGAACCTTCCGAAGAAGCTGCTTACATCGAGAAGCTCTACCAATATGGCGAGCAACTCAACTCTTCCAAAGACAAATCTCAGAACGTCAAGGATTATCAAGGAATCATAGATACAGCTAACACTAGTGTTAAAGCTAAACAACTCGCTGCACAGCTTATTCCTAAGTTCTTCAAGTTCTTTCCTGAACTTTCCGGTCTTGCACTCAATACTCATCTTGATTTGGATACACCTGAGAATATTGGAAAAATGGTTGATATTCTTGTGCAACTTCTTTCCTCGGATGAATTTGTGGAGCGTGATGCTGTGCATAAGGCTCTGATGTCTCTGCTGAGGCAGGATGTGAAAGCTTCGTTGACGACTTTGTTTAAGCACATTCGTGGTAATGTTGAAGAGCAAATTCGGATGACCTTAGTCGTGAAAAGAGATAAGGTCTTCCCTATCAAAGCTGAACTGTTGAAGCCCCAAGAGGAAATGGAACGACACATAACCGATCTAATAAAAAATAGTTTAGAAGATGTAACTGGTATAGAATTTCGAATGTTTATGGATTTCCTGAAGAGTTTGAGCCTATTTGGAGAAAAGGCTCCAGCTGAGCGTATGGAAGAGCTGCTTGGAATCATTGAAGGACAAGCTGATTTAGATCTACCGTTCAATGTTGCTGATGCAAATCAAACAGATCATATTCATAGGTTGATATCATGCCTTCACATGGCACTTCCAATTGTTGTGAGGGGTGCATCTAGCAGCAAATTTATTAACTTCATAAACGACTATATTATACCTGTTTTTGACCAGCTTCCTGGAGAACGAAAAGTAGATTTGCTCAGAAACCTTGCAGAGTTTTCACCTTTCACAACACCACAAGATTCACGACAAATGCTTCCTTCTATTGTTCAGTTGCTGAAGAAATACATGACTTGGAAGAAAACCGGAGAAGAGATGAATTTTACATATGTTGAGTGCTTGTTGTACACATTTCATCACCTAGCTCAAAAGGTTCCTAATGCCACCAATAGTTTATGTGGTTACAAAATTGTTACTGGTCAGCCATCTGATAGGCTTGGAGAAGACTTCTCAGAGCAATATGATGATTTTACCGAGAGATTGAAAAACGTTGAGGAGTTCACCCGGGCTACAATCAAGAAACTAACTCAAGGAATGGCTGAAAACAACAAATCTATGGCAGATGCTAAAACTGATGAAGAAAAGGAAAAAATTAAAACTAAAAAACAGAATGCTACAACTGGGCTGCGTACCTGCAATAATATTTTGACGATGACAAAGCCATTGCACGCAAAAGCACCTTCTTTTATTGGAGATAAGAGAATCAACCTTTCTTGGAAAGAAGCAACCAAATCTGCATCAACTACCGCACCAGCTATATTTTATTCTTTTTTCCCTTTTGAGAAGCGAAAACGGCCGGCTACTACCGGCAATGGATCCAACAATATTGCATTGAAGAAGGGTCGAGGTTCTGGTGGTATGCAAAATCAACTTGTCAATAGAGCACTAGGCGGATTATCTGGTGGAGGAAGAGCAGAGTCTCTGGTGGAGGTAGAGGTGGAGCAAGGGGCGGGGCCAGGGCCAGGCTGGGGTGGTCGCGGAAGAGGAAGTGGAAGAGGTAGAGGTAGAGGGTATTGGTGA

Protein sequence

>Msa0695130

MTTEPSEEAAYIEKLYQYGEQLNSSKDKSQNVKDYQGIIDTANTSVKAKQLAAQLIPKFFKFFPELSGLALNTHLDLDTPENIGKMVDILVQLLSSDEFVERDAVHKALMSLLRQDVKASLTTLFKHIRGNVEEQIRMTLVVKRDKVFPIKAELLKPQEEMERHITDLIKNSLEDVTGIEFRMFMDFLKSLSLFGEKAPAERMEELLGIIEGQADLDLPFNVADANQTDHIHRLISCLHMALPIVVRGASSSKFINFINDYIIPVFDQLPGERKVDLLRNLAEFSPFTTPQDSRQMLPSIVQLLKKYMTWKKTGEEMNFTYVECLLYTFHHLAQKVPNATNSLCGYKIVTGQPSDRLGEDFSEQYDDFTERLKNVEEFTRATIKKLTQGMAENNKSMADAKTDEEKEKIKTKKQNATTGLRTCNNILTMTKPLHAKAPSFIGDKRINLSWKEATKSASTTAPAIFYSFFPFEKRKRPATTGNGSNNIALKKGRGSGGMQNQLVNRALGGLSGGGRAESLVEVEVEQGAGPGPGWGGRGRGSGRGRGRGYW*