Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0169610 | sp|Q8W034|RNP1_ARATH | 58.807 | 352 | 121 | 6 | 1 | 345 | 1 | 335 | 7.36e-108 | 328 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0169610 | A0A072VX62 | 97.872 | 470 | 5 | 2 | 1 | 466 | 1 | 469 | 0.0 | 884 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001450 | Msa0169610 | 0.831637 | 1.491056e-55 | -8.615850e-47 |
Msa0003720 | Msa0169610 | 0.802956 | 4.386713e-49 | -8.615850e-47 |
Msa0008090 | Msa0169610 | 0.812474 | 4.162537e-51 | -8.615850e-47 |
Msa0012940 | Msa0169610 | 0.807212 | 5.642955e-50 | -8.615850e-47 |
Msa0029630 | Msa0169610 | 0.909937 | 3.273495e-82 | -8.615850e-47 |
Msa0033880 | Msa0169610 | 0.816883 | 4.396300e-52 | -8.615850e-47 |
Msa0038000 | Msa0169610 | 0.802955 | 4.387241e-49 | -8.615850e-47 |
Msa0041690 | Msa0169610 | 0.826323 | 2.888748e-54 | -8.615850e-47 |
Msa0046740 | Msa0169610 | 0.801784 | 7.646200e-49 | -8.615850e-47 |
Msa0048180 | Msa0169610 | 0.804743 | 1.866111e-49 | -8.615850e-47 |
Msa0051740 | Msa0169610 | 0.803542 | 3.316601e-49 | -8.615850e-47 |
Msa0069330 | Msa0169610 | 0.827351 | 1.641640e-54 | -8.615850e-47 |
Msa0076040 | Msa0169610 | 0.816420 | 5.581342e-52 | -8.615850e-47 |
Msa0077900 | Msa0169610 | 0.824355 | 8.443215e-54 | -8.615850e-47 |
Msa0079920 | Msa0169610 | 0.899935 | 1.209897e-77 | -8.615850e-47 |
Msa0080730 | Msa0169610 | 0.822301 | 2.549246e-53 | -8.615850e-47 |
Msa0089640 | Msa0169610 | 0.806267 | 8.939546e-50 | -8.615850e-47 |
Msa0090360 | Msa0169610 | 0.806848 | 6.737951e-50 | -8.615850e-47 |
Msa0091610 | Msa0169610 | 0.801307 | 9.578559e-49 | -8.615850e-47 |
Msa0093850 | Msa0169610 | 0.821219 | 4.536093e-53 | -8.615850e-47 |
Msa0094470 | Msa0169610 | 0.806107 | 9.658293e-50 | -8.615850e-47 |
Msa0097950 | Msa0169610 | 0.806336 | 8.644099e-50 | -8.615850e-47 |
Msa0098740 | Msa0169610 | 0.808784 | 2.612085e-50 | -8.615850e-47 |
Msa0104550 | Msa0169610 | 0.827053 | 1.934932e-54 | -8.615850e-47 |
Msa0115370 | Msa0169610 | 0.809983 | 1.444623e-50 | -8.615850e-47 |
Msa0119900 | Msa0169610 | 0.831094 | 2.027892e-55 | -8.615850e-47 |
Msa0123510 | Msa0169610 | 0.820001 | 8.637789e-53 | -8.615850e-47 |
Msa0125450 | Msa0169610 | 0.898547 | 4.768220e-77 | -8.615850e-47 |
Msa0125540 | Msa0169610 | 0.896465 | 3.594254e-76 | -8.615850e-47 |
Msa0127850 | Msa0169610 | 0.838854 | 2.245674e-57 | -8.615850e-47 |
Msa0131590 | Msa0169610 | 0.864462 | 1.194878e-64 | -8.615850e-47 |
Msa0131700 | Msa0169610 | 0.811282 | 7.569780e-51 | -8.615850e-47 |
Msa0136120 | Msa0169610 | 0.824228 | 9.044973e-54 | -8.615850e-47 |
Msa0137840 | Msa0169610 | 0.814855 | 1.245691e-51 | -8.615850e-47 |
Msa0138360 | Msa0169610 | 0.824565 | 7.533855e-54 | -8.615850e-47 |
Msa0141400 | Msa0169610 | 0.814026 | 1.899660e-51 | -8.615850e-47 |
Msa0142410 | Msa0169610 | 0.822599 | 2.173013e-53 | -8.615850e-47 |
Msa0146080 | Msa0169610 | 0.829182 | 5.938201e-55 | -8.615850e-47 |
Msa0146280 | Msa0169610 | 0.826153 | 3.172114e-54 | -8.615850e-47 |
Msa0147980 | Msa0169610 | 0.837441 | 5.189786e-57 | -8.615850e-47 |
Msa0150570 | Msa0169610 | 0.812741 | 3.638818e-51 | -8.615850e-47 |
Msa0168090 | Msa0169610 | 0.802229 | 6.195317e-49 | -8.615850e-47 |
Msa0169610 | Msa0172980 | 0.803561 | 3.286817e-49 | -8.615850e-47 |
Msa0169610 | Msa0174000 | 0.805826 | 1.106775e-49 | -8.615850e-47 |
Msa0169610 | Msa0177960 | 0.818317 | 2.087791e-52 | -8.615850e-47 |
Msa0169610 | Msa0181610 | 0.805339 | 1.399969e-49 | -8.615850e-47 |
Msa0169610 | Msa0184040 | 0.812167 | 4.857973e-51 | -8.615850e-47 |
Msa0169610 | Msa0188690 | 0.864781 | 9.497875e-65 | -8.615850e-47 |
Msa0169610 | Msa0199420 | 0.828807 | 7.321130e-55 | -8.615850e-47 |
Msa0169610 | Msa0209500 | 0.811246 | 7.704322e-51 | -8.615850e-47 |
Msa0169610 | Msa0223170 | 0.814413 | 1.560576e-51 | -8.615850e-47 |
Msa0169610 | Msa0236620 | 0.827248 | 1.737199e-54 | -8.615850e-47 |
Msa0169610 | Msa0237200 | 0.822263 | 2.601243e-53 | -8.615850e-47 |
Msa0169610 | Msa0241830 | 0.825030 | 5.853682e-54 | -8.615850e-47 |
Msa0169610 | Msa0244970 | 0.807932 | 3.970508e-50 | -8.615850e-47 |
Msa0169610 | Msa0244980 | 0.822655 | 2.109468e-53 | -8.615850e-47 |
Msa0169610 | Msa0245580 | 0.824793 | 6.657376e-54 | -8.615850e-47 |
Msa0169610 | Msa0247060 | 0.826456 | 2.686629e-54 | -8.615850e-47 |
Msa0169610 | Msa0249580 | 0.803342 | 3.648736e-49 | -8.615850e-47 |
Msa0169610 | Msa0269470 | 0.800015 | 1.757407e-48 | -8.615850e-47 |
Msa0169610 | Msa0270210 | 0.861807 | 7.911605e-64 | -8.615850e-47 |
Msa0169610 | Msa0274970 | 0.815342 | 9.709418e-52 | -8.615850e-47 |
Msa0169610 | Msa0275360 | 0.802552 | 5.313501e-49 | -8.615850e-47 |
Msa0169610 | Msa0284180 | 0.809530 | 1.808214e-50 | -8.615850e-47 |
Msa0169610 | Msa0295250 | 0.801409 | 9.128703e-49 | -8.615850e-47 |
Msa0169610 | Msa0295590 | 0.818182 | 2.240499e-52 | -8.615850e-47 |
Msa0169610 | Msa0296250 | 0.823713 | 1.194646e-53 | -8.615850e-47 |
Msa0169610 | Msa0296790 | 0.806398 | 8.389021e-50 | -8.615850e-47 |
Msa0169610 | Msa0296920 | 0.803261 | 3.792157e-49 | -8.615850e-47 |
Msa0169610 | Msa0300350 | 0.807520 | 4.856802e-50 | -8.615850e-47 |
Msa0169610 | Msa0307850 | 0.873049 | 1.986114e-67 | -8.615850e-47 |
Msa0169610 | Msa0307860 | 0.823582 | 1.282039e-53 | -8.615850e-47 |
Msa0169610 | Msa0311720 | 0.802433 | 5.624036e-49 | -8.615850e-47 |
Msa0169610 | Msa0315680 | 0.810498 | 1.118590e-50 | -8.615850e-47 |
Msa0169610 | Msa0320590 | 0.845201 | 4.706203e-59 | -8.615850e-47 |
Msa0169610 | Msa0322900 | 0.836375 | 9.708710e-57 | -8.615850e-47 |
Msa0169610 | Msa0324240 | 0.829488 | 5.004388e-55 | -8.615850e-47 |
Msa0169610 | Msa0339910 | 0.806386 | 8.435308e-50 | -8.615850e-47 |
Msa0169610 | Msa0341690 | 0.817522 | 3.156463e-52 | -8.615850e-47 |
Msa0169610 | Msa0363060 | 0.836249 | 1.045165e-56 | -8.615850e-47 |
Msa0169610 | Msa0363640 | 0.855646 | 5.486101e-62 | -8.615850e-47 |
Msa0169610 | Msa0369450 | 0.849021 | 4.222784e-60 | -8.615850e-47 |
Msa0169610 | Msa0376280 | 0.828326 | 9.567551e-55 | -8.615850e-47 |
Msa0169610 | Msa0377820 | 0.802263 | 6.096272e-49 | -8.615850e-47 |
Msa0169610 | Msa0378970 | 0.820675 | 6.052116e-53 | -8.615850e-47 |
Msa0169610 | Msa0378980 | 0.820762 | 5.779688e-53 | -8.615850e-47 |
Msa0169610 | Msa0380300 | 0.824273 | 8.825774e-54 | -8.615850e-47 |
Msa0169610 | Msa0384670 | 0.812872 | 3.406263e-51 | -8.615850e-47 |
Msa0169610 | Msa0387730 | 0.800191 | 1.618159e-48 | -8.615850e-47 |
Msa0169610 | Msa0395820 | 0.800999 | 1.107276e-48 | -8.615850e-47 |
Msa0169610 | Msa0426580 | 0.830053 | 3.647321e-55 | -8.615850e-47 |
Msa0169610 | Msa0434570 | 0.836851 | 7.342882e-57 | -8.615850e-47 |
Msa0169610 | Msa0434770 | 0.834378 | 3.103654e-56 | -8.615850e-47 |
Msa0169610 | Msa0443390 | 0.827739 | 1.324631e-54 | -8.615850e-47 |
Msa0169610 | Msa0458640 | 0.816035 | 6.805244e-52 | -8.615850e-47 |
Msa0169610 | Msa0478580 | 0.826356 | 2.837916e-54 | -8.615850e-47 |
Msa0169610 | Msa0480780 | 0.804462 | 2.135675e-49 | -8.615850e-47 |
Msa0169610 | Msa0484290 | 0.840602 | 7.877715e-58 | -8.615850e-47 |
Msa0169610 | Msa0484740 | 0.808248 | 3.400442e-50 | -8.615850e-47 |
Msa0169610 | Msa0504780 | 0.839397 | 1.624282e-57 | -8.615850e-47 |
Msa0169610 | Msa0511770 | 0.823822 | 1.126215e-53 | -8.615850e-47 |
Msa0169610 | Msa0517590 | 0.826733 | 2.307368e-54 | -8.615850e-47 |
Msa0169610 | Msa0518030 | 0.826078 | 3.304780e-54 | -8.615850e-47 |
Msa0169610 | Msa0524500 | 0.869777 | 2.400630e-66 | -8.615850e-47 |
Msa0169610 | Msa0527190 | 0.800777 | 1.229382e-48 | -8.615850e-47 |
Msa0169610 | Msa0531250 | 0.820375 | 7.091139e-53 | -8.615850e-47 |
Msa0169610 | Msa0547160 | 0.826385 | 2.792621e-54 | -8.615850e-47 |
Msa0169610 | Msa0547990 | 0.839912 | 1.193087e-57 | -8.615850e-47 |
Msa0169610 | Msa0552810 | 0.809880 | 1.520777e-50 | -8.615850e-47 |
Msa0169610 | Msa0556060 | 0.805700 | 1.176289e-49 | -8.615850e-47 |
Msa0169610 | Msa0560500 | 0.801780 | 7.659868e-49 | -8.615850e-47 |
Msa0169610 | Msa0581070 | 0.817478 | 3.229047e-52 | -8.615850e-47 |
Msa0169610 | Msa0581110 | 0.870294 | 1.627347e-66 | -8.615850e-47 |
Msa0169610 | Msa0593700 | 0.813685 | 2.258854e-51 | -8.615850e-47 |
Msa0169610 | Msa0603570 | 0.807452 | 5.020885e-50 | -8.615850e-47 |
Msa0169610 | Msa0610310 | 0.801663 | 8.095753e-49 | -8.615850e-47 |
Msa0169610 | Msa0615580 | 0.804910 | 1.721645e-49 | -8.615850e-47 |
Msa0169610 | Msa0618950 | 0.814564 | 1.444951e-51 | -8.615850e-47 |
Msa0169610 | Msa0620230 | 0.824942 | 6.141056e-54 | -8.615850e-47 |
Msa0169610 | Msa0628420 | 0.822544 | 2.238448e-53 | -8.615850e-47 |
Msa0169610 | Msa0631250 | 0.836490 | 9.078133e-57 | -8.615850e-47 |
Msa0169610 | Msa0633570 | 0.803023 | 4.247499e-49 | -8.615850e-47 |
Msa0169610 | Msa0642970 | 0.815456 | 9.161793e-52 | -8.615850e-47 |
Msa0169610 | Msa0644030 | 0.822415 | 2.397724e-53 | -8.615850e-47 |
Msa0169610 | Msa0644800 | 0.808827 | 2.557392e-50 | -8.615850e-47 |
Msa0169610 | Msa0652690 | 0.805131 | 1.548272e-49 | -8.615850e-47 |
Msa0169610 | Msa0658480 | 0.812703 | 3.709211e-51 | -8.615850e-47 |
Msa0169610 | Msa0661300 | 0.805405 | 1.356091e-49 | -8.615850e-47 |
Msa0169610 | Msa0662630 | 0.816907 | 4.341106e-52 | -8.615850e-47 |
Msa0169610 | Msa0662890 | 0.825297 | 5.061244e-54 | -8.615850e-47 |
Msa0169610 | Msa0666230 | 0.800753 | 1.243285e-48 | -8.615850e-47 |
Msa0169610 | Msa0687230 | 0.822910 | 1.839281e-53 | -8.615850e-47 |
Msa0169610 | Msa0689500 | 0.812217 | 4.736571e-51 | -8.615850e-47 |
Msa0169610 | Msa0692840 | 0.839836 | 1.248412e-57 | -8.615850e-47 |
Msa0169610 | Msa0692940 | 0.803297 | 3.728934e-49 | -8.615850e-47 |
Msa0169610 | Msa0695130 | 0.818748 | 1.667337e-52 | -8.615850e-47 |
Msa0169610 | Msa0697720 | 0.804959 | 1.681418e-49 | -8.615850e-47 |
Msa0169610 | Msa0705390 | 0.810200 | 1.297421e-50 | -8.615850e-47 |
Msa0169610 | Msa0708000 | -0.809258 | 2.068338e-50 | -8.615850e-47 |
Msa0169610 | Msa0708250 | 0.804175 | 2.451028e-49 | -8.615850e-47 |
Msa0169610 | Msa0734960 | 0.849885 | 2.425752e-60 | -8.615850e-47 |
Msa0169610 | Msa0743530 | 0.802500 | 5.448685e-49 | -8.615850e-47 |
Msa0169610 | Msa0744100 | 0.832092 | 1.151506e-55 | -8.615850e-47 |
Msa0169610 | Msa0752510 | 0.831092 | 2.030782e-55 | -8.615850e-47 |
Msa0169610 | Msa0752700 | 0.864815 | 9.267697e-65 | -8.615850e-47 |
Msa0169610 | Msa0785130 | 0.800496 | 1.402703e-48 | -8.615850e-47 |
Msa0169610 | Msa0788120 | 0.814524 | 1.474929e-51 | -8.615850e-47 |
Msa0169610 | Msa0788770 | 0.804247 | 2.367152e-49 | -8.615850e-47 |
Msa0169610 | Msa0790400 | 0.863712 | 2.047312e-64 | -8.615850e-47 |
Msa0169610 | Msa0794970 | 0.851899 | 6.569064e-61 | -8.615850e-47 |
Msa0169610 | Msa0808800 | 0.801761 | 7.728570e-49 | -8.615850e-47 |
Msa0169610 | Msa0822180 | 0.830133 | 3.485840e-55 | -8.615850e-47 |
Msa0169610 | Msa0825270 | 0.835842 | 1.325670e-56 | -8.615850e-47 |
Msa0169610 | Msa0826500 | 0.812265 | 4.624806e-51 | -8.615850e-47 |
Msa0169610 | Msa0828680 | 0.805974 | 1.029954e-49 | -8.615850e-47 |
Msa0169610 | Msa0830880 | 0.816025 | 6.840588e-52 | -8.615850e-47 |
Msa0169610 | Msa0831100 | 0.854201 | 1.440621e-61 | -8.615850e-47 |
Msa0169610 | Msa0833190 | -0.811376 | 7.220730e-51 | -8.615850e-47 |
Msa0169610 | Msa0836500 | 0.800210 | 1.603903e-48 | -8.615850e-47 |
Msa0169610 | Msa0852430 | 0.808813 | 2.575220e-50 | -8.615850e-47 |
Msa0169610 | Msa0864420 | 0.834102 | 3.639457e-56 | -8.615850e-47 |
Msa0169610 | Msa0870650 | 0.821419 | 4.079158e-53 | -8.615850e-47 |
Msa0169610 | Msa0880450 | 0.821105 | 4.817321e-53 | -8.615850e-47 |
Msa0169610 | Msa0881270 | 0.808593 | 2.870211e-50 | -8.615850e-47 |
Msa0169610 | Msa0888940 | 0.806347 | 8.596680e-50 | -8.615850e-47 |
Msa0169610 | Msa0898040 | 0.833442 | 5.321176e-56 | -8.615850e-47 |
Msa0169610 | Msa0898760 | 0.822282 | 2.575114e-53 | -8.615850e-47 |
Msa0169610 | Msa0913240 | 0.804177 | 2.448072e-49 | -8.615850e-47 |
Msa0169610 | Msa0932570 | 0.833840 | 4.232611e-56 | -8.615850e-47 |
Msa0169610 | Msa0943170 | 0.864125 | 1.522844e-64 | -8.615850e-47 |
Msa0169610 | Msa0945240 | 0.803160 | 3.979402e-49 | -8.615850e-47 |
Msa0169610 | Msa0958000 | 0.805583 | 1.244799e-49 | -8.615850e-47 |
Msa0169610 | Msa0959520 | 0.804016 | 2.644603e-49 | -8.615850e-47 |
Msa0169610 | Msa0961350 | 0.809461 | 1.870389e-50 | -8.615850e-47 |
Msa0169610 | Msa0963020 | 0.801461 | 8.907960e-49 | -8.615850e-47 |
Msa0169610 | Msa0970530 | 0.801551 | 8.535803e-49 | -8.615850e-47 |
Msa0169610 | Msa0970600 | 0.826477 | 2.655246e-54 | -8.615850e-47 |
Msa0169610 | Msa0980540 | 0.815194 | 1.047668e-51 | -8.615850e-47 |
Msa0169610 | Msa0980940 | 0.811932 | 5.467569e-51 | -8.615850e-47 |
Msa0169610 | Msa1009750 | 0.813837 | 2.091218e-51 | -8.615850e-47 |
Msa0169610 | Msa1019240 | 0.813603 | 2.354534e-51 | -8.615850e-47 |
Msa0169610 | Msa1019260 | 0.814346 | 1.614511e-51 | -8.615850e-47 |
Msa0169610 | Msa1025940 | 0.803470 | 3.433448e-49 | -8.615850e-47 |
Msa0169610 | Msa1027250 | 0.803463 | 3.444633e-49 | -8.615850e-47 |
Msa0169610 | Msa1035230 | 0.818801 | 1.621854e-52 | -8.615850e-47 |
Msa0169610 | Msa1037510 | 0.846059 | 2.754637e-59 | -8.615850e-47 |
Msa0169610 | Msa1039900 | 0.819308 | 1.243247e-52 | -8.615850e-47 |
Msa0169610 | Msa1050910 | 0.803055 | 4.184302e-49 | -8.615850e-47 |
Msa0169610 | Msa1072600 | 0.810141 | 1.336106e-50 | -8.615850e-47 |
Msa0169610 | Msa1081930 | 0.804673 | 1.929295e-49 | -8.615850e-47 |
Msa0169610 | Msa1097820 | 0.817070 | 3.989449e-52 | -8.615850e-47 |
Msa0169610 | Msa1123350 | 0.864748 | 9.724868e-65 | -8.615850e-47 |
Msa0169610 | Msa1126510 | 0.800713 | 1.266676e-48 | -8.615850e-47 |
Msa0169610 | Msa1126830 | 0.869256 | 3.548843e-66 | -8.615850e-47 |
Msa0169610 | Msa1127540 | 0.813828 | 2.100554e-51 | -8.615850e-47 |
Msa0169610 | Msa1127590 | 0.847504 | 1.109326e-59 | -8.615850e-47 |
Msa0169610 | Msa1128600 | 0.812382 | 4.359585e-51 | -8.615850e-47 |
Msa0169610 | Msa1130980 | 0.866292 | 3.172350e-65 | -8.615850e-47 |
Msa0169610 | Msa1158570 | 0.817181 | 3.767292e-52 | -8.615850e-47 |
Msa0169610 | Msa1165780 | 0.848099 | 7.602769e-60 | -8.615850e-47 |
Msa0169610 | Msa1165940 | 0.834055 | 3.738601e-56 | -8.615850e-47 |
Msa0169610 | Msa1174530 | 0.818352 | 2.049750e-52 | -8.615850e-47 |
Msa0169610 | Msa1179980 | 0.805113 | 1.561766e-49 | -8.615850e-47 |
Msa0169610 | Msa1186130 | 0.811302 | 7.493477e-51 | -8.615850e-47 |
Msa0169610 | Msa1194230 | 0.819244 | 1.285844e-52 | -8.615850e-47 |
Msa0169610 | Msa1201830 | 0.804547 | 2.050136e-49 | -8.615850e-47 |
Msa0169610 | Msa1202580 | 0.809734 | 1.634182e-50 | -8.615850e-47 |
Msa0169610 | Msa1206650 | 0.866110 | 3.623567e-65 | -8.615850e-47 |
Msa0169610 | Msa1208020 | 0.822524 | 2.262409e-53 | -8.615850e-47 |
Msa0169610 | Msa1212950 | 0.804934 | 1.701930e-49 | -8.615850e-47 |
Msa0169610 | Msa1227690 | 0.831113 | 2.006341e-55 | -8.615850e-47 |
Msa0169610 | Msa1235250 | 0.823428 | 1.392638e-53 | -8.615850e-47 |
Msa0169610 | Msa1243740 | -0.808144 | 3.577166e-50 | -8.615850e-47 |
Msa0169610 | Msa1251160 | 0.820490 | 6.673091e-53 | -8.615850e-47 |
Msa0169610 | Msa1254560 | 0.802605 | 5.181771e-49 | -8.615850e-47 |
Msa0169610 | Msa1254710 | 0.807010 | 6.229088e-50 | -8.615850e-47 |
Msa0169610 | Msa1255410 | 0.833629 | 4.777762e-56 | -8.615850e-47 |
Msa0169610 | Msa1257070 | 0.807398 | 5.154811e-50 | -8.615850e-47 |
Msa0169610 | Msa1264210 | 0.803217 | 3.872676e-49 | -8.615850e-47 |
Msa0169610 | Msa1270620 | 0.803507 | 3.372913e-49 | -8.615850e-47 |
Msa0169610 | Msa1270690 | 0.809549 | 1.791401e-50 | -8.615850e-47 |
Msa0169610 | Msa1276970 | 0.840580 | 7.980049e-58 | -8.615850e-47 |
Msa0169610 | Msa1290450 | 0.822406 | 2.409057e-53 | -8.615850e-47 |
Msa0169610 | Msa1306990 | 0.801659 | 8.110215e-49 | -8.615850e-47 |
Msa0169610 | Msa1320820 | 0.811452 | 6.952981e-51 | -8.615850e-47 |
Msa0169610 | Msa1328640 | 0.807297 | 5.415356e-50 | -8.615850e-47 |
Msa0169610 | Msa1329300 | 0.823320 | 1.475516e-53 | -8.615850e-47 |
Msa0169610 | Msa1331250 | 0.817653 | 2.949048e-52 | -8.615850e-47 |
Msa0169610 | Msa1332590 | 0.811278 | 7.583814e-51 | -8.615850e-47 |
Msa0169610 | Msa1333560 | 0.811951 | 5.413665e-51 | -8.615850e-47 |
Msa0169610 | Msa1335250 | 0.810804 | 9.605306e-51 | -8.615850e-47 |
Msa0169610 | Msa1343290 | 0.826325 | 2.886753e-54 | -8.615850e-47 |
Msa0169610 | Msa1344310 | 0.815474 | 9.073538e-52 | -8.615850e-47 |
Msa0169610 | Msa1346740 | 0.835388 | 1.727822e-56 | -8.615850e-47 |
Msa0169610 | Msa1351540 | 0.816807 | 4.572231e-52 | -8.615850e-47 |
Msa0169610 | Msa1356610 | 0.893329 | 6.956308e-75 | -8.615850e-47 |
Msa0169610 | Msa1362420 | 0.807008 | 6.233060e-50 | -8.615850e-47 |
Msa0169610 | Msa1367590 | 0.870697 | 1.200036e-66 | -8.615850e-47 |
Msa0169610 | Msa1369150 | 0.800015 | 1.757407e-48 | -8.615850e-47 |
Msa0169610 | Msa1371520 | 0.810782 | 9.714402e-51 | -8.615850e-47 |
Msa0169610 | Msa1374060 | 0.822530 | 2.254797e-53 | -8.615850e-47 |
Msa0169610 | Msa1376650 | 0.867664 | 1.158532e-65 | -8.615850e-47 |
Msa0169610 | Msa1381350 | 0.834599 | 2.730220e-56 | -8.615850e-47 |
Msa0169610 | Msa1382780 | 0.821604 | 3.695923e-53 | -8.615850e-47 |
Msa0169610 | Msa1389680 | 0.809329 | 1.997296e-50 | -8.615850e-47 |
Msa0169610 | Msa1391480 | 0.822141 | 2.776644e-53 | -8.615850e-47 |
Msa0169610 | Msa1398790 | 0.817069 | 3.992324e-52 | -8.615850e-47 |
Msa0169610 | Msa1400820 | 0.800034 | 1.741938e-48 | -8.615850e-47 |
Msa0169610 | Msa1403570 | 0.845777 | 3.286485e-59 | -8.615850e-47 |
Msa0169610 | Msa1409950 | 0.813266 | 2.791911e-51 | -8.615850e-47 |
Msa0169610 | Msa1411950 | 0.834371 | 3.114969e-56 | -8.615850e-47 |
Msa0169610 | Msa1413260 | 0.807408 | 5.130149e-50 | -8.615850e-47 |
Msa0169610 | Msa1416260 | 0.808799 | 2.592846e-50 | -8.615850e-47 |
Msa0169610 | Msa1418340 | 0.868607 | 5.757676e-66 | -8.615850e-47 |
Msa0169610 | Msa1421560 | 0.829860 | 4.063942e-55 | -8.615850e-47 |
Msa0169610 | Msa1427160 | 0.806801 | 6.896726e-50 | -8.615850e-47 |
Msa0169610 | Msa1432480 | 0.849810 | 2.546414e-60 | -8.615850e-47 |
Msa0169610 | Msa1433390 | 0.803568 | 3.276948e-49 | -8.615850e-47 |
Msa0169610 | Msa1435770 | 0.802410 | 5.684849e-49 | -8.615850e-47 |
Msa0169610 | Msa1443300 | 0.867353 | 1.457254e-65 | -8.615850e-47 |
Msa0169610 | Msa1443310 | 0.808639 | 2.805180e-50 | -8.615850e-47 |
Msa0169610 | Msa1443930 | 0.821714 | 3.486515e-53 | -8.615850e-47 |
Msa0169610 | Msa1445940 | 0.811883 | 5.603206e-51 | -8.615850e-47 |
Msa0169610 | Msa1450720 | 0.843005 | 1.827980e-58 | -8.615850e-47 |
Msa0169610 | Msa1458290 | 0.802381 | 5.763500e-49 | -8.615850e-47 |
Msa0169610 | Msa1458810 | 0.831924 | 1.266638e-55 | -8.615850e-47 |
Msa0169610 | Msa1459960 | 0.850015 | 2.231630e-60 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0169610 | MtrunA17_Chr1g0186351 | 97.872 | 470 | 5 | 2 | 1 | 466 | 1 | 469 | 0.0 | 884 |
Msa0169610 | MtrunA17_Chr3g0101061 | 49.839 | 311 | 115 | 10 | 1 | 284 | 35 | 331 | 5.91e-87 | 275 |
Msa0169610 | MtrunA17_Chr2g0290191 | 62.567 | 187 | 70 | 0 | 4 | 190 | 2 | 188 | 7.67e-85 | 269 |
Msa0169610 | MtrunA17_Chr5g0447761 | 62.827 | 191 | 69 | 1 | 1 | 191 | 1 | 189 | 2.94e-82 | 262 |
Msa0169610 | MtrunA17_Chr3g0135111 | 54.315 | 197 | 85 | 3 | 1 | 192 | 5 | 201 | 1.96e-66 | 218 |
Msa0169610 | MtrunA17_Chr6g0449481 | 43.750 | 208 | 97 | 5 | 6 | 209 | 45 | 236 | 2.10e-51 | 178 |
Msa0169610 | MtrunA17_Chr6g0449481 | 45.055 | 91 | 49 | 1 | 96 | 186 | 33 | 122 | 1.10e-17 | 84.7 |
Msa0169610 | MtrunA17_Chr3g0120721 | 37.912 | 182 | 98 | 3 | 6 | 186 | 18 | 185 | 4.40e-43 | 155 |
Msa0169610 | MtrunA17_Chr3g0120721 | 50.000 | 96 | 45 | 2 | 91 | 186 | 3 | 95 | 3.22e-22 | 97.8 |
Msa0169610 | MtrunA17_Chr5g0402191 | 34.387 | 253 | 141 | 5 | 4 | 247 | 2 | 238 | 2.86e-37 | 140 |
Msa0169610 | MtrunA17_Chr5g0402191 | 30.342 | 234 | 130 | 6 | 7 | 208 | 93 | 325 | 3.12e-22 | 98.2 |
Msa0169610 | MtrunA17_Chr8g0375101 | 31.890 | 254 | 147 | 6 | 4 | 247 | 2 | 239 | 4.83e-31 | 123 |
Msa0169610 | MtrunA17_Chr8g0375101 | 29.339 | 242 | 126 | 9 | 7 | 213 | 93 | 324 | 1.15e-21 | 96.3 |
Msa0169610 | MtrunA17_Chr8g0360551 | 30.108 | 186 | 114 | 2 | 2 | 184 | 69 | 241 | 8.10e-25 | 106 |
Msa0169610 | MtrunA17_Chr4g0045921 | 30.055 | 183 | 113 | 3 | 2 | 184 | 72 | 239 | 4.50e-20 | 91.3 |
Msa0169610 | MtrunA17_Chr3g0144311 | 40.000 | 80 | 47 | 1 | 2 | 80 | 25 | 104 | 9.94e-17 | 80.5 |
Msa0169610 | MtrunA17_Chr3g0144311 | 37.037 | 81 | 51 | 0 | 103 | 183 | 24 | 104 | 6.71e-11 | 63.2 |
Msa0169610 | MtrunA17_Chr5g0426311 | 38.750 | 80 | 48 | 1 | 2 | 80 | 12 | 91 | 6.10e-16 | 78.2 |
Msa0169610 | MtrunA17_Chr5g0440831 | 24.865 | 185 | 131 | 2 | 1 | 184 | 160 | 337 | 6.73e-16 | 80.1 |
Msa0169610 | MtrunA17_Chr4g0017401 | 36.250 | 80 | 50 | 1 | 2 | 80 | 12 | 91 | 5.63e-15 | 75.1 |
Msa0169610 | MtrunA17_Chr3g0127751 | 33.333 | 108 | 70 | 2 | 2 | 108 | 22 | 128 | 7.53e-15 | 74.3 |
Msa0169610 | MtrunA17_Chr7g0255011 | 24.457 | 184 | 138 | 1 | 2 | 184 | 123 | 306 | 1.11e-14 | 76.3 |
Msa0169610 | MtrunA17_Chr4g0058151 | 31.447 | 159 | 97 | 3 | 3 | 159 | 119 | 267 | 1.22e-14 | 74.3 |
Msa0169610 | MtrunA17_Chr4g0058151 | 43.750 | 80 | 42 | 2 | 109 | 186 | 123 | 201 | 7.89e-12 | 66.2 |
Msa0169610 | MtrunA17_Chr7g0219021 | 44.304 | 79 | 42 | 1 | 7 | 83 | 41 | 119 | 1.24e-14 | 73.6 |
Msa0169610 | MtrunA17_Chr7g0219021 | 39.773 | 88 | 51 | 2 | 105 | 191 | 37 | 123 | 1.46e-11 | 64.7 |
Msa0169610 | MtrunA17_Chr1g0210241 | 36.986 | 73 | 43 | 1 | 3 | 75 | 4 | 73 | 1.27e-14 | 73.9 |
Msa0169610 | MtrunA17_Chr2g0278661 | 38.272 | 81 | 48 | 1 | 2 | 80 | 3 | 83 | 1.46e-14 | 73.2 |
Msa0169610 | MtrunA17_Chr2g0278661 | 35.443 | 79 | 50 | 1 | 109 | 186 | 8 | 86 | 3.42e-12 | 66.2 |
Msa0169610 | MtrunA17_Chr8g0346011 | 30.496 | 141 | 81 | 4 | 2 | 133 | 33 | 165 | 2.87e-14 | 73.2 |
Msa0169610 | MtrunA17_Chr8g0346011 | 41.463 | 82 | 45 | 1 | 83 | 164 | 15 | 93 | 4.91e-11 | 63.5 |
Msa0169610 | MtrunA17_Chr7g0276531 | 37.500 | 80 | 49 | 1 | 2 | 80 | 14 | 93 | 8.88e-14 | 71.2 |
Msa0169610 | MtrunA17_Chr1g0181111 | 30.808 | 198 | 117 | 6 | 7 | 190 | 85 | 276 | 1.72e-13 | 70.9 |
Msa0169610 | MtrunA17_Chr4g0044541 | 28.977 | 176 | 111 | 5 | 8 | 178 | 215 | 381 | 2.64e-13 | 72.4 |
Msa0169610 | MtrunA17_Chr4g0044541 | 26.705 | 176 | 109 | 6 | 8 | 180 | 36 | 194 | 7.69e-11 | 64.3 |
Msa0169610 | MtrunA17_Chr2g0328791 | 30.952 | 168 | 90 | 4 | 8 | 166 | 17 | 167 | 4.03e-13 | 70.9 |
Msa0169610 | MtrunA17_Chr3g0110211 | 29.121 | 182 | 112 | 5 | 9 | 188 | 28 | 194 | 8.55e-13 | 69.7 |
Msa0169610 | MtrunA17_Chr3g0121631 | 38.961 | 77 | 47 | 0 | 104 | 180 | 32 | 108 | 1.19e-12 | 65.5 |
Msa0169610 | MtrunA17_Chr3g0119311 | 42.029 | 69 | 37 | 1 | 7 | 75 | 37 | 102 | 3.57e-12 | 63.9 |
Msa0169610 | MtrunA17_Chr4g0061451 | 42.308 | 78 | 44 | 1 | 107 | 183 | 41 | 118 | 4.97e-12 | 66.2 |
Msa0169610 | MtrunA17_Chr4g0061451 | 52.083 | 48 | 23 | 0 | 7 | 54 | 43 | 90 | 1.24e-11 | 65.1 |
Msa0169610 | MtrunA17_Chr1g0201151 | 27.778 | 180 | 109 | 7 | 8 | 178 | 211 | 378 | 7.56e-12 | 67.8 |
Msa0169610 | MtrunA17_Chr4g0035051 | 37.288 | 59 | 37 | 0 | 7 | 65 | 9 | 67 | 8.98e-12 | 62.0 |
Msa0169610 | MtrunA17_Chr8g0372111 | 29.032 | 155 | 85 | 5 | 5 | 156 | 417 | 549 | 1.19e-11 | 67.4 |
Msa0169610 | MtrunA17_Chr4g0050781 | 33.333 | 81 | 52 | 1 | 2 | 80 | 3 | 83 | 1.48e-11 | 63.9 |
Msa0169610 | MtrunA17_Chr3g0086861 | 33.784 | 74 | 46 | 1 | 7 | 80 | 45 | 115 | 3.01e-11 | 65.5 |
Msa0169610 | MtrunA17_Chr3g0086861 | 37.349 | 83 | 49 | 2 | 108 | 187 | 44 | 126 | 5.69e-11 | 64.3 |
Msa0169610 | MtrunA17_Chr4g0035001 | 32.895 | 76 | 49 | 1 | 7 | 80 | 7 | 82 | 3.68e-11 | 61.6 |
Msa0169610 | MtrunA17_Chr4g0070231 | 25.161 | 310 | 181 | 12 | 8 | 294 | 48 | 329 | 4.53e-11 | 64.7 |
Msa0169610 | MtrunA17_Chr3g0133651 | 25.641 | 156 | 105 | 3 | 3 | 156 | 90 | 236 | 5.32e-11 | 64.3 |
Msa0169610 | MtrunA17_Chr7g0265341 | 24.419 | 172 | 125 | 4 | 2 | 171 | 245 | 413 | 5.44e-11 | 65.1 |
Msa0169610 | MtrunA17_Chr4g0035031 | 32.895 | 76 | 49 | 1 | 7 | 80 | 9 | 84 | 6.61e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0169610 | AT2G33410.1 | 56.659 | 413 | 144 | 6 | 1 | 409 | 1 | 382 | 5.16e-120 | 357 |
Msa0169610 | AT4G14300.1 | 58.807 | 352 | 121 | 6 | 1 | 345 | 1 | 335 | 7.49e-109 | 328 |
Msa0169610 | AT4G14300.2 | 58.807 | 352 | 121 | 6 | 1 | 345 | 1 | 335 | 7.49e-109 | 328 |
Msa0169610 | AT5G55550.5 | 59.361 | 219 | 70 | 3 | 1 | 206 | 1 | 213 | 2.23e-86 | 272 |
Msa0169610 | AT5G55550.4 | 59.361 | 219 | 70 | 3 | 1 | 206 | 1 | 213 | 2.23e-86 | 272 |
Msa0169610 | AT5G55550.9 | 59.361 | 219 | 70 | 3 | 1 | 206 | 1 | 213 | 2.23e-86 | 272 |
Msa0169610 | AT5G55550.7 | 59.361 | 219 | 70 | 3 | 1 | 206 | 1 | 213 | 2.23e-86 | 272 |
Msa0169610 | AT5G55550.1 | 59.361 | 219 | 70 | 3 | 1 | 206 | 1 | 213 | 2.23e-86 | 272 |
Msa0169610 | AT5G55550.2 | 59.361 | 219 | 70 | 3 | 1 | 206 | 1 | 213 | 3.87e-86 | 272 |
Msa0169610 | AT5G55550.3 | 59.361 | 219 | 70 | 3 | 1 | 206 | 1 | 213 | 3.87e-86 | 272 |
Msa0169610 | AT5G55550.6 | 59.361 | 219 | 70 | 3 | 1 | 206 | 1 | 213 | 3.87e-86 | 272 |
Msa0169610 | AT5G55550.11 | 59.361 | 219 | 70 | 3 | 1 | 206 | 1 | 213 | 3.87e-86 | 272 |
Msa0169610 | AT4G26650.2 | 62.304 | 191 | 67 | 1 | 3 | 188 | 9 | 199 | 2.54e-83 | 264 |
Msa0169610 | AT4G26650.1 | 62.304 | 191 | 67 | 1 | 3 | 188 | 12 | 202 | 2.77e-83 | 264 |
Msa0169610 | AT3G07810.1 | 59.500 | 200 | 81 | 0 | 1 | 200 | 1 | 200 | 3.10e-81 | 260 |
Msa0169610 | AT3G07810.2 | 59.500 | 200 | 81 | 0 | 1 | 200 | 1 | 200 | 3.25e-81 | 260 |
Msa0169610 | AT5G55550.8 | 48.872 | 266 | 70 | 4 | 1 | 206 | 1 | 260 | 2.03e-77 | 250 |
Msa0169610 | AT5G55550.10 | 48.872 | 266 | 70 | 4 | 1 | 206 | 1 | 260 | 2.40e-77 | 250 |
Msa0169610 | AT5G47620.1 | 55.080 | 187 | 82 | 1 | 1 | 187 | 1 | 185 | 3.97e-72 | 234 |
Msa0169610 | AT5G47620.2 | 55.080 | 187 | 82 | 1 | 1 | 187 | 1 | 185 | 3.97e-72 | 234 |
Msa0169610 | AT5G47620.5 | 55.080 | 187 | 82 | 1 | 1 | 187 | 1 | 185 | 3.97e-72 | 234 |
Msa0169610 | AT5G47620.4 | 49.282 | 209 | 82 | 2 | 1 | 187 | 1 | 207 | 4.62e-67 | 222 |
Msa0169610 | AT1G58470.2 | 48.744 | 199 | 90 | 2 | 1 | 187 | 1 | 199 | 1.09e-57 | 194 |
Msa0169610 | AT1G58470.1 | 48.744 | 199 | 90 | 2 | 1 | 187 | 1 | 199 | 1.09e-57 | 194 |
Msa0169610 | AT1G17640.2 | 44.444 | 207 | 103 | 2 | 6 | 211 | 66 | 261 | 1.18e-54 | 187 |
Msa0169610 | AT1G17640.1 | 44.444 | 207 | 103 | 2 | 6 | 211 | 66 | 261 | 1.18e-54 | 187 |
Msa0169610 | AT1G17640.3 | 44.444 | 207 | 103 | 2 | 6 | 211 | 66 | 261 | 1.18e-54 | 187 |
Msa0169610 | AT3G13224.2 | 43.617 | 188 | 85 | 3 | 6 | 188 | 19 | 190 | 5.81e-51 | 177 |
Msa0169610 | AT3G13224.2 | 49.474 | 95 | 47 | 1 | 92 | 186 | 3 | 96 | 4.37e-21 | 94.7 |
Msa0169610 | AT3G13224.3 | 43.316 | 187 | 85 | 3 | 7 | 188 | 11 | 181 | 1.02e-49 | 173 |
Msa0169610 | AT3G13224.3 | 50.000 | 82 | 40 | 1 | 105 | 186 | 7 | 87 | 4.79e-20 | 91.7 |
Msa0169610 | AT3G13224.1 | 44.311 | 167 | 73 | 2 | 6 | 168 | 19 | 169 | 1.28e-44 | 156 |
Msa0169610 | AT3G13224.1 | 49.474 | 95 | 47 | 1 | 92 | 186 | 3 | 96 | 3.12e-20 | 89.7 |
Msa0169610 | AT5G47620.3 | 52.381 | 126 | 57 | 2 | 63 | 187 | 2 | 125 | 1.63e-37 | 141 |
Msa0169610 | AT5G47620.3 | 30.612 | 98 | 66 | 2 | 3 | 99 | 43 | 139 | 1.04e-11 | 66.6 |
Msa0169610 | AT5G40490.1 | 31.727 | 249 | 140 | 5 | 6 | 253 | 42 | 261 | 7.82e-31 | 124 |
Msa0169610 | AT4G36960.1 | 33.333 | 198 | 109 | 4 | 5 | 196 | 2 | 182 | 5.33e-30 | 120 |
Msa0169610 | AT4G36960.1 | 25.862 | 232 | 116 | 4 | 7 | 187 | 92 | 318 | 7.18e-18 | 85.5 |
Msa0169610 | AT4G36960.2 | 33.333 | 198 | 109 | 4 | 5 | 196 | 2 | 182 | 5.33e-30 | 120 |
Msa0169610 | AT4G36960.2 | 25.862 | 232 | 116 | 4 | 7 | 187 | 92 | 318 | 7.18e-18 | 85.5 |
Msa0169610 | AT5G40490.2 | 33.047 | 233 | 122 | 4 | 24 | 253 | 43 | 244 | 1.47e-28 | 117 |
Msa0169610 | AT5G40490.2 | 47.826 | 69 | 33 | 2 | 118 | 186 | 37 | 102 | 9.37e-13 | 70.1 |
Msa0169610 | AT3G15010.1 | 30.108 | 186 | 114 | 2 | 2 | 184 | 71 | 243 | 2.47e-21 | 96.3 |
Msa0169610 | AT3G15010.2 | 30.108 | 186 | 114 | 2 | 2 | 184 | 71 | 243 | 2.47e-21 | 96.3 |
Msa0169610 | AT1G20880.2 | 42.500 | 80 | 45 | 1 | 2 | 80 | 20 | 99 | 1.41e-17 | 83.2 |
Msa0169610 | AT1G20880.3 | 42.500 | 80 | 45 | 1 | 2 | 80 | 20 | 99 | 1.41e-17 | 83.2 |
Msa0169610 | AT1G20880.1 | 42.500 | 80 | 45 | 1 | 2 | 80 | 20 | 99 | 1.41e-17 | 83.2 |
Msa0169610 | AT1G76460.1 | 41.250 | 80 | 46 | 1 | 2 | 80 | 20 | 99 | 2.66e-17 | 82.4 |
Msa0169610 | AT1G76460.1 | 29.707 | 239 | 129 | 7 | 103 | 303 | 19 | 256 | 2.98e-12 | 67.4 |
Msa0169610 | AT3G56860.9 | 28.191 | 188 | 119 | 4 | 2 | 177 | 136 | 319 | 4.08e-15 | 77.8 |
Msa0169610 | AT3G56860.11 | 28.191 | 188 | 119 | 4 | 2 | 177 | 136 | 319 | 4.08e-15 | 77.8 |
Msa0169610 | AT3G56860.8 | 28.191 | 188 | 119 | 4 | 2 | 177 | 136 | 319 | 4.08e-15 | 77.8 |
Msa0169610 | AT3G56860.5 | 28.191 | 188 | 119 | 4 | 2 | 177 | 136 | 319 | 4.08e-15 | 77.8 |
Msa0169610 | AT3G56860.7 | 28.191 | 188 | 119 | 4 | 2 | 177 | 136 | 319 | 4.08e-15 | 77.8 |
Msa0169610 | AT3G56860.2 | 28.191 | 188 | 119 | 4 | 2 | 177 | 136 | 319 | 4.08e-15 | 77.8 |
Msa0169610 | AT3G56860.6 | 28.191 | 188 | 119 | 4 | 2 | 177 | 136 | 319 | 4.08e-15 | 77.8 |
Msa0169610 | AT3G56860.10 | 28.191 | 188 | 119 | 4 | 2 | 177 | 136 | 319 | 4.08e-15 | 77.8 |
Msa0169610 | AT3G56860.3 | 28.191 | 188 | 119 | 4 | 2 | 177 | 136 | 319 | 4.08e-15 | 77.8 |
Msa0169610 | AT3G56860.1 | 28.191 | 188 | 119 | 4 | 2 | 177 | 136 | 319 | 4.08e-15 | 77.8 |
Msa0169610 | AT3G56860.4 | 28.191 | 188 | 119 | 4 | 2 | 177 | 136 | 319 | 4.08e-15 | 77.8 |
Msa0169610 | AT3G54770.3 | 37.500 | 80 | 49 | 1 | 2 | 80 | 13 | 92 | 8.91e-15 | 74.7 |
Msa0169610 | AT2G41060.1 | 24.832 | 298 | 193 | 6 | 2 | 284 | 124 | 405 | 8.96e-15 | 76.6 |
Msa0169610 | AT2G41060.3 | 24.832 | 298 | 193 | 6 | 2 | 284 | 124 | 405 | 8.96e-15 | 76.6 |
Msa0169610 | AT2G41060.2 | 24.832 | 298 | 193 | 6 | 2 | 284 | 124 | 405 | 8.96e-15 | 76.6 |
Msa0169610 | AT4G39260.3 | 36.709 | 79 | 48 | 1 | 7 | 83 | 7 | 85 | 9.40e-15 | 70.1 |
Msa0169610 | AT3G54770.1 | 37.500 | 80 | 49 | 1 | 2 | 80 | 13 | 92 | 9.75e-15 | 74.7 |
Msa0169610 | AT2G23350.1 | 30.114 | 176 | 109 | 5 | 8 | 178 | 227 | 393 | 1.09e-14 | 77.0 |
Msa0169610 | AT4G24770.1 | 29.444 | 180 | 109 | 5 | 3 | 179 | 147 | 311 | 1.10e-14 | 75.5 |
Msa0169610 | AT4G24770.2 | 29.444 | 180 | 109 | 5 | 3 | 179 | 147 | 311 | 1.10e-14 | 75.5 |
Msa0169610 | AT3G26420.1 | 41.026 | 78 | 45 | 1 | 109 | 185 | 8 | 85 | 5.02e-14 | 72.0 |
Msa0169610 | AT1G33470.3 | 35.000 | 80 | 51 | 1 | 2 | 80 | 3 | 82 | 5.14e-14 | 72.0 |
Msa0169610 | AT1G33470.1 | 35.000 | 80 | 51 | 1 | 2 | 80 | 3 | 82 | 5.36e-14 | 72.0 |
Msa0169610 | AT1G33470.2 | 35.000 | 80 | 51 | 1 | 2 | 80 | 3 | 82 | 5.43e-14 | 72.0 |
Msa0169610 | AT2G37220.1 | 31.053 | 190 | 117 | 5 | 7 | 183 | 92 | 280 | 1.32e-13 | 71.6 |
Msa0169610 | AT3G23830.2 | 35.514 | 107 | 60 | 3 | 93 | 190 | 12 | 118 | 2.58e-13 | 67.4 |
Msa0169610 | AT3G23830.2 | 36.145 | 83 | 51 | 1 | 7 | 87 | 36 | 118 | 3.96e-11 | 61.2 |
Msa0169610 | AT3G23830.1 | 35.514 | 107 | 60 | 3 | 93 | 190 | 12 | 118 | 2.58e-13 | 67.4 |
Msa0169610 | AT3G23830.1 | 36.145 | 83 | 51 | 1 | 7 | 87 | 36 | 118 | 3.96e-11 | 61.2 |
Msa0169610 | AT5G61030.2 | 40.000 | 80 | 47 | 1 | 105 | 183 | 37 | 116 | 2.68e-13 | 70.9 |
Msa0169610 | AT5G61030.2 | 37.975 | 79 | 47 | 1 | 7 | 83 | 41 | 119 | 1.52e-11 | 65.9 |
Msa0169610 | AT5G61030.1 | 40.000 | 80 | 47 | 1 | 105 | 183 | 37 | 116 | 2.68e-13 | 70.9 |
Msa0169610 | AT5G61030.1 | 37.975 | 79 | 47 | 1 | 7 | 83 | 41 | 119 | 1.52e-11 | 65.9 |
Msa0169610 | AT1G78260.1 | 35.000 | 80 | 51 | 1 | 2 | 80 | 13 | 92 | 3.04e-13 | 70.5 |
Msa0169610 | AT3G16380.1 | 28.485 | 165 | 108 | 5 | 2 | 161 | 198 | 357 | 3.04e-13 | 72.4 |
Msa0169610 | AT5G04280.1 | 37.975 | 79 | 48 | 1 | 109 | 186 | 8 | 86 | 3.08e-13 | 70.9 |
Msa0169610 | AT5G04280.1 | 35.526 | 76 | 47 | 1 | 7 | 80 | 8 | 83 | 7.25e-13 | 69.7 |
Msa0169610 | AT1G22910.2 | 30.435 | 115 | 74 | 3 | 2 | 115 | 9 | 118 | 3.31e-13 | 69.7 |
Msa0169610 | AT1G22330.1 | 35.000 | 80 | 51 | 1 | 2 | 80 | 13 | 92 | 3.58e-13 | 70.5 |
Msa0169610 | AT1G22910.1 | 30.435 | 115 | 74 | 3 | 2 | 115 | 9 | 118 | 3.63e-13 | 69.7 |
Msa0169610 | AT4G16280.4 | 28.037 | 214 | 115 | 9 | 7 | 204 | 46 | 236 | 3.80e-13 | 72.0 |
Msa0169610 | AT4G16280.2 | 28.037 | 214 | 115 | 9 | 7 | 204 | 121 | 311 | 3.88e-13 | 72.4 |
Msa0169610 | AT4G00830.4 | 25.000 | 152 | 90 | 3 | 7 | 156 | 117 | 246 | 4.12e-13 | 71.6 |
Msa0169610 | AT2G36660.1 | 27.059 | 170 | 111 | 6 | 8 | 171 | 203 | 365 | 6.40e-13 | 71.2 |
Msa0169610 | AT4G16280.3 | 28.037 | 214 | 115 | 9 | 7 | 204 | 121 | 311 | 6.81e-13 | 71.2 |
Msa0169610 | AT4G00830.2 | 25.974 | 154 | 86 | 5 | 7 | 156 | 117 | 246 | 7.13e-13 | 70.9 |
Msa0169610 | AT4G00830.1 | 25.974 | 154 | 86 | 5 | 7 | 156 | 117 | 246 | 7.13e-13 | 70.9 |
Msa0169610 | AT4G00830.6 | 25.974 | 154 | 86 | 5 | 7 | 156 | 117 | 246 | 7.13e-13 | 70.9 |
Msa0169610 | AT1G78260.2 | 35.000 | 80 | 51 | 1 | 2 | 80 | 13 | 92 | 7.22e-13 | 69.3 |
Msa0169610 | AT2G46780.1 | 32.500 | 80 | 53 | 1 | 2 | 80 | 18 | 97 | 8.36e-13 | 69.7 |
Msa0169610 | AT2G46780.1 | 35.714 | 84 | 54 | 0 | 101 | 184 | 15 | 98 | 2.53e-11 | 65.5 |
Msa0169610 | AT2G46780.2 | 32.500 | 80 | 53 | 1 | 2 | 80 | 18 | 97 | 8.36e-13 | 69.7 |
Msa0169610 | AT2G46780.2 | 35.714 | 84 | 54 | 0 | 101 | 184 | 15 | 98 | 2.53e-11 | 65.5 |
Msa0169610 | AT4G39260.2 | 34.146 | 82 | 52 | 1 | 1 | 80 | 1 | 82 | 8.86e-13 | 65.5 |
Msa0169610 | AT1G60650.2 | 40.659 | 91 | 52 | 2 | 97 | 186 | 2 | 91 | 1.71e-12 | 68.6 |
Msa0169610 | AT1G60650.2 | 37.500 | 64 | 40 | 0 | 5 | 68 | 11 | 74 | 2.89e-11 | 64.7 |
Msa0169610 | AT1G60650.1 | 40.659 | 91 | 52 | 2 | 97 | 186 | 2 | 91 | 1.71e-12 | 68.6 |
Msa0169610 | AT1G60650.1 | 37.500 | 64 | 40 | 0 | 5 | 68 | 11 | 74 | 2.89e-11 | 64.7 |
Msa0169610 | AT3G19130.1 | 28.251 | 223 | 132 | 7 | 4 | 214 | 106 | 312 | 1.75e-12 | 69.7 |
Msa0169610 | AT4G39260.1 | 35.526 | 76 | 47 | 1 | 7 | 80 | 7 | 82 | 2.22e-12 | 65.9 |
Msa0169610 | AT4G39260.4 | 36.364 | 66 | 42 | 0 | 1 | 66 | 1 | 66 | 3.16e-12 | 63.5 |
Msa0169610 | AT4G34110.1 | 27.273 | 176 | 120 | 4 | 8 | 181 | 217 | 386 | 3.22e-12 | 69.3 |
Msa0169610 | AT2G18510.1 | 27.869 | 183 | 115 | 4 | 8 | 188 | 27 | 194 | 3.31e-12 | 68.2 |
Msa0169610 | AT5G50250.1 | 29.518 | 166 | 97 | 4 | 4 | 163 | 111 | 262 | 4.02e-12 | 67.4 |
Msa0169610 | AT1G22910.3 | 30.435 | 115 | 74 | 3 | 2 | 115 | 9 | 118 | 4.85e-12 | 67.8 |
Msa0169610 | AT1G49600.1 | 28.755 | 233 | 137 | 8 | 4 | 229 | 117 | 327 | 8.98e-12 | 67.4 |
Msa0169610 | AT5G54900.1 | 26.768 | 198 | 117 | 5 | 3 | 193 | 57 | 233 | 9.87e-12 | 67.0 |
Msa0169610 | AT2G21660.2 | 34.211 | 76 | 48 | 1 | 7 | 80 | 9 | 84 | 1.69e-11 | 62.8 |
Msa0169610 | AT2G21660.1 | 34.211 | 76 | 48 | 1 | 7 | 80 | 9 | 84 | 2.38e-11 | 62.8 |
Msa0169610 | AT4G13850.3 | 50.000 | 50 | 25 | 0 | 7 | 56 | 36 | 85 | 2.39e-11 | 62.0 |
Msa0169610 | AT4G13850.2 | 50.000 | 50 | 25 | 0 | 7 | 56 | 36 | 85 | 2.90e-11 | 62.0 |
Msa0169610 | AT4G13850.1 | 50.000 | 50 | 25 | 0 | 7 | 56 | 36 | 85 | 3.22e-11 | 62.0 |
Msa0169610 | AT1G22760.1 | 27.879 | 165 | 93 | 5 | 5 | 161 | 135 | 281 | 4.08e-11 | 65.9 |
Msa0169610 | AT1G74230.1 | 34.286 | 105 | 65 | 1 | 79 | 183 | 9 | 109 | 4.09e-11 | 64.3 |
Msa0169610 | AT5G19350.1 | 25.654 | 191 | 119 | 5 | 8 | 193 | 26 | 198 | 7.13e-11 | 64.3 |
Msa0169610 | AT5G19350.2 | 25.654 | 191 | 119 | 5 | 8 | 193 | 26 | 198 | 7.17e-11 | 64.3 |
Msa0169610 | AT4G13860.1 | 41.892 | 74 | 42 | 1 | 109 | 181 | 4 | 77 | 8.16e-11 | 58.9 |
Find 242 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCAGTCTATTGTGCATTTC+TGG | 0.017033 | 1_4:+52826468 | Msa0169610:three_prime_UTR |
CCCAGTGCAGCGGCTGGATA+TGG | 0.199366 | 1_4:+52825426 | Msa0169610:CDS |
GCTCAAGCATCTGGTAATTA+TGG | 0.207271 | 1_4:+52825693 | Msa0169610:CDS |
GAGAGAGAAGTTGAGGATTT+GGG | 0.208672 | 1_4:-52823169 | None:intergenic |
CGTCAGTACTTTGAGGCTTA+TGG | 0.215160 | 1_4:+52824769 | Msa0169610:CDS |
AACGACCATCATATGCATTT+TGG | 0.220885 | 1_4:-52825050 | None:intergenic |
AGAGAGAGAAGTTGAGGATT+TGG | 0.221002 | 1_4:-52823170 | None:intergenic |
TCCCTCTGGCTATGGCTCTA+TGG | 0.223448 | 1_4:+52825329 | Msa0169610:CDS |
TACGGTGCTGCTGCTGGATA+TGG | 0.233890 | 1_4:+52825141 | Msa0169610:CDS |
GGCCATCACATCATCAAATT+TGG | 0.238049 | 1_4:+52826490 | Msa0169610:three_prime_UTR |
GGGGACACAAATGGAAATTC+TGG | 0.245972 | 1_4:+52825639 | Msa0169610:CDS |
AAGACATTTCATGATTTAAA+TGG | 0.251191 | 1_4:+52824898 | Msa0169610:CDS |
CAGATCCTTCTGTTCTTGAT+AGG | 0.255513 | 1_4:+52823452 | Msa0169610:CDS |
GGTGGAAGTGATAATTCTTA+TGG | 0.266263 | 1_4:+52825489 | Msa0169610:CDS |
AGATCTGGAAACTCCAATTC+TGG | 0.283173 | 1_4:+52824673 | Msa0169610:CDS |
GGTGCTGTTGGTGGGCGTAC+TGG | 0.285659 | 1_4:+52825528 | Msa0169610:CDS |
ACTGGACGACCACGAGGATT+TGG | 0.286841 | 1_4:+52824829 | Msa0169610:CDS |
AAGGAGCATTTCAGCAATTA+TGG | 0.288185 | 1_4:+52823355 | Msa0169610:CDS |
TGACCACTAGCATTACTATT+TGG | 0.290071 | 1_4:-52825558 | None:intergenic |
TTACGGTAACGCTGCTCCTT+GGG | 0.294029 | 1_4:+52825353 | Msa0169610:CDS |
CGGTGGCAGTGGCAGCTATA+TGG | 0.296325 | 1_4:+52825605 | Msa0169610:CDS |
CCAAGTGGTGGTGCTGGATC+TGG | 0.298460 | 1_4:+52825381 | Msa0169610:CDS |
GCTGTGACTCATTACAATTT+TGG | 0.300457 | 1_4:+52826619 | Msa0169610:three_prime_UTR |
GCTGTTGGGCTTGTCGAGAC+TGG | 0.303409 | 1_4:-52825770 | None:intergenic |
GCTAGCAATGGCCTTGGTTA+TGG | 0.305001 | 1_4:+52825174 | Msa0169610:CDS |
ATTTCCACCATTCCCAGAAT+TGG | 0.306814 | 1_4:-52824686 | None:intergenic |
TAAGCAGCATTAGGGACATT+TGG | 0.319444 | 1_4:-52825267 | None:intergenic |
CACCAGGATTGGCATCCTTT+GGG | 0.321613 | 1_4:-52824948 | None:intergenic |
TATCAAGGGTATGGAGCTTC+TGG | 0.321667 | 1_4:+52825021 | Msa0169610:CDS |
AGAGTAAGAGAGAGAGAAAA+AGG | 0.322300 | 1_4:+52823265 | Msa0169610:five_prime_UTR |
TTGATAGTTAAATCTCTTGC+TGG | 0.325345 | 1_4:+52825800 | Msa0169610:three_prime_UTR |
CCACCAGCATAAGCAGCATT+AGG | 0.341386 | 1_4:-52825276 | None:intergenic |
GTGGTGGCCCAAGGAGTTCA+TGG | 0.341617 | 1_4:+52825295 | Msa0169610:CDS |
GCACCAGGATTGGCATCCTT+TGG | 0.343147 | 1_4:-52824949 | None:intergenic |
GGTGGTGCCGCTGCTGGTTA+TGG | 0.348598 | 1_4:+52825216 | Msa0169610:CDS |
AGCTATATGGGCAGTGGCTA+TGG | 0.349286 | 1_4:+52825618 | Msa0169610:CDS |
GAAGACAAACATGTTATTGA+TGG | 0.351272 | 1_4:+52823481 | Msa0169610:CDS |
TCATCAAATTTGGAGATTCC+TGG | 0.352131 | 1_4:+52826500 | Msa0169610:three_prime_UTR |
ATTTCTGTCTCTTCGAGATC+TGG | 0.352182 | 1_4:+52824658 | Msa0169610:CDS |
GGTGCTCCAAGTGGTGGTGC+TGG | 0.352327 | 1_4:+52825375 | Msa0169610:CDS |
TCAGTCTATTGTGCATTTCT+GGG | 0.355239 | 1_4:+52826469 | Msa0169610:three_prime_UTR |
TATGGGAATCCAGGTGTATA+TGG | 0.357794 | 1_4:+52825507 | Msa0169610:CDS |
GTGCTGTTGGTGGGCGTACT+GGG | 0.358635 | 1_4:+52825529 | Msa0169610:CDS |
AAGCAGCATTAGGGACATTT+GGG | 0.361470 | 1_4:-52825266 | None:intergenic |
TATGGGACTCCTCAGGGAAA+TGG | 0.366806 | 1_4:+52825711 | Msa0169610:CDS |
CTGGACGACCACGAGGATTT+GGG | 0.374739 | 1_4:+52824830 | Msa0169610:CDS |
GCAGGTGGATTCCCACCTTA+TGG | 0.375919 | 1_4:+52825108 | Msa0169610:CDS |
CCCTCTGGCTATGGCTCTAT+GGG | 0.377410 | 1_4:+52825330 | Msa0169610:CDS |
AATCCACCTGCAGCGCTTTG+AGG | 0.379867 | 1_4:-52825096 | None:intergenic |
CTCTCTTGAGAAAGCCCTCT+TGG | 0.380820 | 1_4:-52824626 | None:intergenic |
GGTGGTTATGGCGGCGGGTA+TGG | 0.383764 | 1_4:+52825468 | Msa0169610:CDS |
GTGGTGGCTGACAGATTTGT+GGG | 0.385271 | 1_4:+52826563 | Msa0169610:three_prime_UTR |
GGACCTGCTGCTGCAACATA+TGG | 0.385802 | 1_4:+52825240 | Msa0169610:CDS |
ACTATCAAAATTACTGCTGT+TGG | 0.386629 | 1_4:-52825785 | None:intergenic |
ACCTAGAGGCTTTGGTTTCG+TGG | 0.390416 | 1_4:+52823423 | Msa0169610:CDS |
ATGGGACTCCTCAGGGAAAT+GGG | 0.391721 | 1_4:+52825712 | Msa0169610:CDS |
TGTGGTGGCTGACAGATTTG+TGG | 0.392685 | 1_4:+52826562 | Msa0169610:three_prime_UTR |
GGAGGTGGTAGTGGCGGAAT+GGG | 0.393257 | 1_4:+52824994 | Msa0169610:CDS |
GCTCAGGCTCCCTCTGGCTA+TGG | 0.395122 | 1_4:+52825321 | Msa0169610:CDS |
TGAGCAGGCCATGAACTCCT+TGG | 0.399463 | 1_4:-52825303 | None:intergenic |
TCTGCTTACGGTGCTGCTGC+TGG | 0.402283 | 1_4:+52825135 | Msa0169610:CDS |
CTATCAAAATTACTGCTGTT+GGG | 0.403143 | 1_4:-52825784 | None:intergenic |
GCTGGTTATGGTGGTGGCTA+TGG | 0.403993 | 1_4:+52825741 | Msa0169610:CDS |
TACCCGTCAAGGGTTTATAT+TGG | 0.404540 | 1_4:+52826820 | Msa0169610:three_prime_UTR |
GGGCAAGCTGGTTATGGTGG+TGG | 0.405622 | 1_4:+52825735 | Msa0169610:CDS |
CTCGTGGTCGTCCAGTATTT+TGG | 0.406861 | 1_4:-52824822 | None:intergenic |
AAGGAGTTCATGGCCTGCTC+AGG | 0.407314 | 1_4:+52825305 | Msa0169610:CDS |
ACTGGTAAACCTAGAGGCTT+TGG | 0.407636 | 1_4:+52823415 | Msa0169610:CDS |
CCCATATCCAGCCGCTGCAC+TGG | 0.408284 | 1_4:-52825427 | None:intergenic |
CTCAAGCATCTGGTAATTAT+GGG | 0.410457 | 1_4:+52825694 | Msa0169610:CDS |
ATACCGAGGAGGCAGTTGAT+AGG | 0.410687 | 1_4:+52824866 | Msa0169610:CDS |
AAAATTCCGTCAGTACTTTG+AGG | 0.411179 | 1_4:+52824762 | Msa0169610:CDS |
GTTACGGTAACGCTGCTCCT+TGG | 0.411640 | 1_4:+52825352 | Msa0169610:CDS |
TAGCCAGAGGGAGCCTGAGC+AGG | 0.416103 | 1_4:-52825318 | None:intergenic |
AAATAGTAATGCTAGTGGTC+AGG | 0.416638 | 1_4:+52825560 | Msa0169610:CDS |
AGATCCTTCTGTTCTTGATA+GGG | 0.422703 | 1_4:+52823453 | Msa0169610:CDS |
TGGAGGGTTGCCTCCCACTC+TGG | 0.424326 | 1_4:+52824732 | Msa0169610:CDS |
GTCATGTATGACCAAAATAC+TGG | 0.425122 | 1_4:+52824811 | Msa0169610:CDS |
GGTTACGGGTATGGTGGTTA+TGG | 0.425539 | 1_4:+52825456 | Msa0169610:CDS |
TGGAGGTGGTAGTGGCGGAA+TGG | 0.426792 | 1_4:+52824993 | Msa0169610:CDS |
CACCAGCATAAGCAGCATTA+GGG | 0.428191 | 1_4:-52825275 | None:intergenic |
GTGGAAGTGATAATTCTTAT+GGG | 0.428912 | 1_4:+52825490 | Msa0169610:CDS |
TTCCCATATGTTGCAGCAGC+AGG | 0.429236 | 1_4:-52825243 | None:intergenic |
GGTGGTGCTGGAGGTGGTAG+TGG | 0.429702 | 1_4:+52824985 | Msa0169610:CDS |
TAAAGAGGAAGAGGGTTTCG+AGG | 0.430381 | 1_4:-52823113 | None:intergenic |
GAAGAAGAATAAAGAGGAAG+AGG | 0.430436 | 1_4:-52823122 | None:intergenic |
GAGCAGGCCATGAACTCCTT+GGG | 0.431541 | 1_4:-52825302 | None:intergenic |
TGGCCTGCTCAGGCTCCCTC+TGG | 0.433036 | 1_4:+52825315 | Msa0169610:CDS |
AGCTCATGTTGTAAGATTAA+CGG | 0.435143 | 1_4:-52825846 | None:intergenic |
GCTCATGTTGTAAGATTAAC+GGG | 0.435332 | 1_4:-52825845 | None:intergenic |
TCTGAACAGGCTCAAGCATC+TGG | 0.438324 | 1_4:+52825684 | Msa0169610:CDS |
AGCATATTGATTATATCAGT+TGG | 0.441221 | 1_4:+52826597 | Msa0169610:three_prime_UTR |
CTGAAATGAAGGAGAACTGC+TGG | 0.442885 | 1_4:-52826750 | None:intergenic |
TGCAGCTTGGAGATCTGAAC+AGG | 0.449022 | 1_4:+52825671 | Msa0169610:CDS |
CTGTTGGGCTTGTCGAGACT+GGG | 0.450476 | 1_4:-52825769 | None:intergenic |
GGCGGAATGGGTGGTTATCA+AGG | 0.451686 | 1_4:+52825006 | Msa0169610:CDS |
GGCTATGGCTCTATGGGTTA+CGG | 0.452769 | 1_4:+52825336 | Msa0169610:CDS |
GCTATATGGGCAGTGGCTAT+GGG | 0.453617 | 1_4:+52825619 | Msa0169610:CDS |
CTCCCAAAGGATGCCAATCC+TGG | 0.453968 | 1_4:+52824946 | Msa0169610:CDS |
CCAGTGCAGCGGCTGGATAT+GGG | 0.457614 | 1_4:+52825427 | Msa0169610:CDS |
TGGTAATTATGGGACTCCTC+AGG | 0.457704 | 1_4:+52825704 | Msa0169610:CDS |
CTTATGCTGGTGGTGGCCCA+AGG | 0.460869 | 1_4:+52825286 | Msa0169610:CDS |
CTTGGTTATGGTGCAGCATA+TGG | 0.461527 | 1_4:+52825186 | Msa0169610:CDS |
GGGAATCAAGGTTACGGGTA+TGG | 0.463883 | 1_4:+52825447 | Msa0169610:CDS |
GGGACTCCTCAGGGAAATGG+GGG | 0.464934 | 1_4:+52825714 | Msa0169610:CDS |
AAAGGAATGGATTCGGATCA+AGG | 0.465987 | 1_4:+52823283 | Msa0169610:exon |
GATATGGGAATCAAGGTTAC+GGG | 0.468359 | 1_4:+52825442 | Msa0169610:CDS |
CCTTTCTGTCCTACCCGTCA+AGG | 0.469834 | 1_4:+52826809 | Msa0169610:three_prime_UTR |
GATCTGGAAACTCCAATTCT+GGG | 0.470761 | 1_4:+52824674 | Msa0169610:CDS |
GAGTGTTAAAGTTCATGCTT+TGG | 0.472019 | 1_4:+52826664 | Msa0169610:three_prime_UTR |
GATAATTCTTATGGGAATCC+AGG | 0.473239 | 1_4:+52825498 | Msa0169610:CDS |
TGGGACTCCTCAGGGAAATG+GGG | 0.473876 | 1_4:+52825713 | Msa0169610:CDS |
AGAGAGAAGTTGAGGATTTG+GGG | 0.479079 | 1_4:-52823168 | None:intergenic |
CTGCAAGGTAGCGGTGGCAG+TGG | 0.480147 | 1_4:+52825594 | Msa0169610:CDS |
CCTTATGGATCCTCTGCTTA+CGG | 0.480491 | 1_4:+52825123 | Msa0169610:CDS |
CCATGATATGAGTGGACACT+TGG | 0.482754 | 1_4:-52826429 | None:intergenic |
ACAAATGGAAATTCTGGGTA+TGG | 0.484706 | 1_4:+52825645 | Msa0169610:CDS |
GAAGAGGGTTTCGAGGGTTG+TGG | 0.485333 | 1_4:-52823106 | None:intergenic |
ACGGCTATTTGCACCAGGAT+TGG | 0.486166 | 1_4:-52824959 | None:intergenic |
GGTGGCAGTGGCAGCTATAT+GGG | 0.490059 | 1_4:+52825606 | Msa0169610:CDS |
ATGCCAATATAAACCCTTGA+CGG | 0.490152 | 1_4:-52826823 | None:intergenic |
GTCCCTAATGCTGCTTATGC+TGG | 0.490213 | 1_4:+52825273 | Msa0169610:CDS |
ATAGCCTTCAACCTGGTTTG+TGG | 0.490834 | 1_4:+52826544 | Msa0169610:three_prime_UTR |
GGTTCGGCTAGCAATGGCCT+TGG | 0.491314 | 1_4:+52825168 | Msa0169610:CDS |
CAATCTCCCAGTGCAGCGGC+TGG | 0.493261 | 1_4:+52825420 | Msa0169610:CDS |
AACCCTATCAACTGCCTCCT+CGG | 0.494485 | 1_4:-52824869 | None:intergenic |
GGATATGGGAATCAAGGTTA+CGG | 0.497803 | 1_4:+52825441 | Msa0169610:CDS |
ACGGTGCTGCTGCTGGATAT+GGG | 0.503532 | 1_4:+52825142 | Msa0169610:CDS |
AGTTATGGTGGTGCCGCTGC+TGG | 0.506490 | 1_4:+52825210 | Msa0169610:CDS |
GGGACACAAATGGAAATTCT+GGG | 0.506783 | 1_4:+52825640 | Msa0169610:CDS |
AGTGGCTATGGGGACACAAA+TGG | 0.508337 | 1_4:+52825630 | Msa0169610:CDS |
CCAGATCCAGCACCACCACT+TGG | 0.509006 | 1_4:-52825381 | None:intergenic |
TTTCACAGAAGCTGAAATGA+AGG | 0.509201 | 1_4:-52826761 | None:intergenic |
TCCTGGTGCAAATAGCCGTA+TGG | 0.510146 | 1_4:+52824963 | Msa0169610:CDS |
CCAAGTGTCCACTCATATCA+TGG | 0.511038 | 1_4:+52826429 | Msa0169610:three_prime_UTR |
GGTTATGGCGGCGGGTATGG+TGG | 0.511710 | 1_4:+52825471 | Msa0169610:CDS |
GGATCTGGTGCAGCAACTGC+AGG | 0.512933 | 1_4:+52825396 | Msa0169610:CDS |
ATGTTGTAAGATTAACGGGC+AGG | 0.514652 | 1_4:-52825841 | None:intergenic |
CGTATGGGTGGTGCTGGAGG+TGG | 0.515469 | 1_4:+52824979 | Msa0169610:CDS |
ATGCAGCCTCAAAGCGCTGC+AGG | 0.516233 | 1_4:+52825090 | Msa0169610:CDS |
TACCGAGGAGGCAGTTGATA+GGG | 0.519939 | 1_4:+52824867 | Msa0169610:CDS |
GGTGTATATGGTGCTGTTGG+TGG | 0.522591 | 1_4:+52825519 | Msa0169610:CDS |
GGTGGTAGTGGCGGAATGGG+TGG | 0.522676 | 1_4:+52824997 | Msa0169610:CDS |
GCCACCACAAACCAGGTTGA+AGG | 0.523273 | 1_4:-52826548 | None:intergenic |
GATCTCGAAGAGACAGAAAT+CGG | 0.523559 | 1_4:-52824655 | None:intergenic |
CCATATCCAGCCGCTGCACT+GGG | 0.523919 | 1_4:-52825426 | None:intergenic |
GTTCGATCTTCATACACAAT+GGG | 0.524290 | 1_4:+52825900 | Msa0169610:three_prime_UTR |
GCTGCTGCTGGATATGGGTA+TGG | 0.524368 | 1_4:+52825147 | Msa0169610:CDS |
GGAAACTCCAATTCTGGGAA+TGG | 0.526118 | 1_4:+52824679 | Msa0169610:CDS |
CTTTCTGTCCTACCCGTCAA+GGG | 0.526261 | 1_4:+52826810 | Msa0169610:three_prime_UTR |
GGTGCAGCATATGGAAGTTA+TGG | 0.528477 | 1_4:+52825195 | Msa0169610:CDS |
TGCTGGATATGGGTATGGTT+CGG | 0.529889 | 1_4:+52825152 | Msa0169610:CDS |
GTCCACTCATATCATGGCTA+AGG | 0.530322 | 1_4:+52826435 | Msa0169610:three_prime_UTR |
AATAGCCGTATGGGTGGTGC+TGG | 0.531723 | 1_4:+52824973 | Msa0169610:CDS |
CCCATACGGCTATTTGCACC+AGG | 0.534366 | 1_4:-52824964 | None:intergenic |
AAAGAGGAAGAGGGTTTCGA+GGG | 0.534370 | 1_4:-52823112 | None:intergenic |
ATGGGTGGTTATCAAGGGTA+TGG | 0.538262 | 1_4:+52825012 | Msa0169610:CDS |
AAGAAGAATAAAGAGGAAGA+GGG | 0.539559 | 1_4:-52823121 | None:intergenic |
CCTTGGGGTGCTCCAAGTGG+TGG | 0.539752 | 1_4:+52825369 | Msa0169610:CDS |
GGTGCTGGAGGTGGTAGTGG+CGG | 0.542113 | 1_4:+52824988 | Msa0169610:CDS |
GCCTTCAACCTGGTTTGTGG+TGG | 0.542182 | 1_4:+52826547 | Msa0169610:three_prime_UTR |
CCTTGACGGGTAGGACAGAA+AGG | 0.542475 | 1_4:-52826809 | None:intergenic |
TGCCAATATAAACCCTTGAC+GGG | 0.545250 | 1_4:-52826822 | None:intergenic |
TTTCATCGGTGGGATTTCAT+GGG | 0.547867 | 1_4:+52823312 | Msa0169610:CDS |
GGTTATGGTGGTGGCTATGG+TGG | 0.548099 | 1_4:+52825744 | Msa0169610:CDS |
AATATAAACCCTTGACGGGT+AGG | 0.548294 | 1_4:-52826818 | None:intergenic |
GGTAATTATGGGACTCCTCA+GGG | 0.549138 | 1_4:+52825705 | Msa0169610:CDS |
GGGTATGGTGGTTATGGCGG+CGG | 0.549502 | 1_4:+52825462 | Msa0169610:CDS |
CCAGGTGTATATGGTGCTGT+TGG | 0.550786 | 1_4:+52825516 | Msa0169610:CDS |
GCGGCTGGATATGGGAATCA+AGG | 0.551018 | 1_4:+52825435 | Msa0169610:CDS |
AATGCTGCTTATGCTGGTGG+TGG | 0.553175 | 1_4:+52825279 | Msa0169610:CDS |
AACTCCAATTCTGGGAATGG+TGG | 0.554277 | 1_4:+52824682 | Msa0169610:CDS |
AATAGTAATGCTAGTGGTCA+GGG | 0.554643 | 1_4:+52825561 | Msa0169610:CDS |
GAGAGAAGTTGAGGATTTGG+GGG | 0.555399 | 1_4:-52823167 | None:intergenic |
GACCTGCTGCTGCAACATAT+GGG | 0.556190 | 1_4:+52825241 | Msa0169610:CDS |
ATCTTCATACACAATGGGAC+TGG | 0.556448 | 1_4:+52825905 | Msa0169610:three_prime_UTR |
GTGTATATGGTGCTGTTGGT+GGG | 0.561548 | 1_4:+52825520 | Msa0169610:CDS |
CAGCCTCAAAGCGCTGCAGG+TGG | 0.562473 | 1_4:+52825093 | Msa0169610:CDS |
CCTGGTGCAAATAGCCGTAT+GGG | 0.563282 | 1_4:+52824964 | Msa0169610:CDS |
CTGGGTATGGAAATGCAGCT+TGG | 0.563448 | 1_4:+52825658 | Msa0169610:CDS |
AGCAGCAGCACCGTAAGCAG+AGG | 0.566324 | 1_4:-52825133 | None:intergenic |
GGACTCCTCAGGGAAATGGG+GGG | 0.568599 | 1_4:+52825715 | Msa0169610:CDS |
TGGTGGCTGACAGATTTGTG+GGG | 0.570327 | 1_4:+52826564 | Msa0169610:three_prime_UTR |
AGCCGTATGGGTGGTGCTGG+AGG | 0.570725 | 1_4:+52824976 | Msa0169610:CDS |
GGTATGGTGGTTATGGCGGC+GGG | 0.573792 | 1_4:+52825463 | Msa0169610:CDS |
CCTAATGCTGCTTATGCTGG+TGG | 0.574642 | 1_4:+52825276 | Msa0169610:CDS |
CTCCAAATTTGATGATGTGA+TGG | 0.575664 | 1_4:-52826492 | None:intergenic |
TACGGTAACGCTGCTCCTTG+GGG | 0.578018 | 1_4:+52825354 | Msa0169610:CDS |
CAAGGGTATGGAGCTTCTGG+TGG | 0.579903 | 1_4:+52825024 | Msa0169610:CDS |
TTCCTTAGCCATGATATGAG+TGG | 0.579924 | 1_4:-52826437 | None:intergenic |
CCGTAAGCAGAGGATCCATA+AGG | 0.580853 | 1_4:-52825123 | None:intergenic |
GGTAGTGAACTGCAAGGTAG+CGG | 0.585742 | 1_4:+52825585 | Msa0169610:CDS |
CTCTGTATATGAGAGAGAAG+AGG | 0.586076 | 1_4:-52823083 | None:intergenic |
ATGGTCGTTCAGATTCTAGT+AGG | 0.588507 | 1_4:+52825064 | Msa0169610:CDS |
GCGGAATGGGTGGTTATCAA+GGG | 0.588939 | 1_4:+52825007 | Msa0169610:CDS |
TTTAAATGGTAAACAAGTAG+AGG | 0.589277 | 1_4:+52824912 | Msa0169610:CDS |
TATTCAGGTTGATGCCAAGA+GGG | 0.591422 | 1_4:+52824612 | Msa0169610:intron |
CGTTCGATCTTCATACACAA+TGG | 0.595847 | 1_4:+52825899 | Msa0169610:three_prime_UTR |
TCGAAGAGACAGAAATCGGT+TGG | 0.596694 | 1_4:-52824651 | None:intergenic |
CATAAGCCTCAAAGTACTGA+CGG | 0.596705 | 1_4:-52824768 | None:intergenic |
TGAAATGAAGGAGAACTGCT+GGG | 0.597621 | 1_4:-52826749 | None:intergenic |
AGTGGCAGCTATATGGGCAG+TGG | 0.597675 | 1_4:+52825612 | Msa0169610:CDS |
AGAACCCTATCAAGAACAGA+AGG | 0.599565 | 1_4:-52823457 | None:intergenic |
GATTTCATGGGATACGAATG+AGG | 0.601256 | 1_4:+52823324 | Msa0169610:CDS |
CCCATAGAGCCATAGCCAGA+GGG | 0.602657 | 1_4:-52825330 | None:intergenic |
CCAACAGCACCATATACACC+TGG | 0.603562 | 1_4:-52825516 | None:intergenic |
GGAAACCAAAATGCATATGA+TGG | 0.603835 | 1_4:+52825045 | Msa0169610:CDS |
GGGTATGGTTCGGCTAGCAA+TGG | 0.604135 | 1_4:+52825162 | Msa0169610:CDS |
GGTGGCTGACAGATTTGTGG+GGG | 0.606282 | 1_4:+52826565 | Msa0169610:three_prime_UTR |
AATCAAGGTTACGGGTATGG+TGG | 0.608429 | 1_4:+52825450 | Msa0169610:CDS |
TGTTGTAAGATTAACGGGCA+GGG | 0.608815 | 1_4:-52825840 | None:intergenic |
TAAGCAGAGGATCCATAAGG+TGG | 0.611830 | 1_4:-52825120 | None:intergenic |
TCTGTCAGCCACCACAAACC+AGG | 0.612277 | 1_4:-52826555 | None:intergenic |
CCACCACTTGGAGCACCCCA+AGG | 0.612791 | 1_4:-52825369 | None:intergenic |
CACCTCCAGCACCACCCATA+CGG | 0.615756 | 1_4:-52824978 | None:intergenic |
TACGGGTATGGTGGTTATGG+CGG | 0.616171 | 1_4:+52825459 | Msa0169610:CDS |
GGTGCCGCTGCTGGTTATGG+AGG | 0.617047 | 1_4:+52825219 | Msa0169610:CDS |
ACCACGAAACCAAAGCCTCT+AGG | 0.617911 | 1_4:-52823424 | None:intergenic |
AAATGTCATAGCCTTCAACC+TGG | 0.620839 | 1_4:+52826537 | Msa0169610:three_prime_UTR |
CAAGAGGGCTTTCTCAAGAG+AGG | 0.622387 | 1_4:+52824627 | Msa0169610:CDS |
GCTCCTTGGGGTGCTCCAAG+TGG | 0.623958 | 1_4:+52825366 | Msa0169610:CDS |
GGTAAAGCGTGCACTCCCAA+AGG | 0.624619 | 1_4:+52824933 | Msa0169610:CDS |
ACCCATAGAGCCATAGCCAG+AGG | 0.625073 | 1_4:-52825331 | None:intergenic |
AGTGAACTGCAAGGTAGCGG+TGG | 0.630469 | 1_4:+52825588 | Msa0169610:CDS |
CTTACAATGATTTCTTTCAG+CGG | 0.634196 | 1_4:+52825867 | Msa0169610:three_prime_UTR |
AGGTCCTCCATAACCAGCAG+CGG | 0.641543 | 1_4:-52825223 | None:intergenic |
GTTATGAGAGAGAAGAACAC+TGG | 0.644240 | 1_4:+52823397 | Msa0169610:CDS |
TTATTCAGGTTGATGCCAAG+AGG | 0.644453 | 1_4:+52824611 | Msa0169610:intron |
ACATGTTATTGATGGCAGAA+CGG | 0.646515 | 1_4:+52823489 | Msa0169610:CDS |
TACGAATGAGGAGAAGCTGA+AGG | 0.650828 | 1_4:+52823336 | Msa0169610:CDS |
AGGTCAATCTCCCAGTGCAG+CGG | 0.652350 | 1_4:+52825416 | Msa0169610:CDS |
CTATATGGGCAGTGGCTATG+GGG | 0.656547 | 1_4:+52825620 | Msa0169610:CDS |
GCTCCAAATAGTAATGCTAG+TGG | 0.658443 | 1_4:+52825555 | Msa0169610:CDS |
AAGCAGAGGATCCATAAGGT+GGG | 0.660176 | 1_4:-52825119 | None:intergenic |
CATATGCTGCACCATAACCA+AGG | 0.663627 | 1_4:-52825185 | None:intergenic |
CAAAATACTGGACGACCACG+AGG | 0.670177 | 1_4:+52824823 | Msa0169610:CDS |
GCAGCATATGGAAGTTATGG+TGG | 0.673073 | 1_4:+52825198 | Msa0169610:CDS |
CAGGGTGGTAGTGAACTGCA+AGG | 0.689901 | 1_4:+52825579 | Msa0169610:CDS |
GGTGCAAATAGCCGTATGGG+TGG | 0.691605 | 1_4:+52824967 | Msa0169610:CDS |
AGTAATGCTAGTGGTCAGGG+TGG | 0.707479 | 1_4:+52825564 | Msa0169610:CDS |
AAGAACACTGGTAAACCTAG+AGG | 0.711338 | 1_4:+52823409 | Msa0169610:CDS |
GTAATAAACCCAAATCCTCG+TGG | 0.717165 | 1_4:-52824838 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGTTTTTTTGTTTAAAAATT+TGG | + | chr1_4:52823594-52823613 | Msa0169610:intron | 10.0% |
!!! | TATAAAAATTGGGTTTTTAA+TGG | - | chr1_4:52823206-52823225 | None:intergenic | 15.0% |
!!! | TTTGTTTTGTTTAAAGATTA+AGG | + | chr1_4:52823672-52823691 | Msa0169610:intron | 15.0% |
!!! | TCTGTTTCATTTAATATTTT+CGG | - | chr1_4:52824294-52824313 | None:intergenic | 15.0% |
!! | AAAATAAGATTTCCTATTAA+AGG | - | chr1_4:52826187-52826206 | None:intergenic | 15.0% |
!!! | GTTTTCATTGTAATTTTTGT+GGG | + | chr1_4:52823724-52823743 | Msa0169610:intron | 20.0% |
!!! | TTTGTTTTGTTCAATTGTAA+AGG | + | chr1_4:52823752-52823771 | Msa0169610:intron | 20.0% |
!! | AGGATTTAAATAGATTGTAT+CGG | + | chr1_4:52824153-52824172 | Msa0169610:intron | 20.0% |
!! | TAAAGTATATGTTTCACTTT+GGG | + | chr1_4:52824183-52824202 | Msa0169610:intron | 20.0% |
!!! | ATGTTGTAATTTTGTTATTC+AGG | + | chr1_4:52824597-52824616 | Msa0169610:intron | 20.0% |
!! | AAGACATTTCATGATTTAAA+TGG | + | chr1_4:52824898-52824917 | Msa0169610:CDS | 20.0% |
!! | CATACTACTTATTATAAACT+AGG | - | chr1_4:52825971-52825990 | None:intergenic | 20.0% |
!! | CTAGTTTATAATAAGTAGTA+TGG | + | chr1_4:52825969-52825988 | Msa0169610:intron | 20.0% |
!! | TTATATTTCACCTTATATGA+TGG | + | chr1_4:52826115-52826134 | Msa0169610:intron | 20.0% |
!! | TTTATTCTCTTTCCTTTAAT+AGG | + | chr1_4:52826172-52826191 | Msa0169610:intron | 20.0% |
!!! | CATCTTGTTTTATAAATGAT+AGG | + | chr1_4:52826861-52826880 | Msa0169610:three_prime_UTR | 20.0% |
!!! | AGATTAAGGCTTTAATTTTG+AGG | + | chr1_4:52823686-52823705 | Msa0169610:intron | 25.0% |
!!! | GATTAAGGCTTTAATTTTGA+GGG | + | chr1_4:52823687-52823706 | Msa0169610:intron | 25.0% |
!!! | ATTAAGGCTTTAATTTTGAG+GGG | + | chr1_4:52823688-52823707 | Msa0169610:intron | 25.0% |
!! | GGTTTTCATTGTAATTTTTG+TGG | + | chr1_4:52823723-52823742 | Msa0169610:intron | 25.0% |
!!! | GAGACTAATTAATTTGTTCA+TGG | + | chr1_4:52823879-52823898 | Msa0169610:intron | 25.0% |
! | TATTGTGTAATAGAATTGAG+CGG | + | chr1_4:52823953-52823972 | Msa0169610:intron | 25.0% |
!! | AAGTTTTTACAGCAAACAAA+AGG | - | chr1_4:52823999-52824018 | None:intergenic | 25.0% |
!! | ATGCAACATTTAATCTTTTC+AGG | - | chr1_4:52824029-52824048 | None:intergenic | 25.0% |
! | AAGATTAAATGTTGCATCAT+TGG | + | chr1_4:52824032-52824051 | Msa0169610:intron | 25.0% |
!!! | TTATTTTTCCATTGTGGAAT+AGG | + | chr1_4:52824066-52824085 | Msa0169610:intron | 25.0% |
!!! | TAATGGATATTTTTCCATTG+TGG | + | chr1_4:52824094-52824113 | Msa0169610:intron | 25.0% |
!! | ATATTTTTCCATTGTGGAAT+AGG | + | chr1_4:52824100-52824119 | Msa0169610:intron | 25.0% |
! | GTAAAGTATATGTTTCACTT+TGG | + | chr1_4:52824182-52824201 | Msa0169610:intron | 25.0% |
! | GCTTTATATATGCAATAAGA+AGG | - | chr1_4:52824272-52824291 | None:intergenic | 25.0% |
! | AAAATTACAACATGCTAGTT+AGG | - | chr1_4:52824590-52824609 | None:intergenic | 25.0% |
! | AGAACCAAAAAGATATTTGT+TGG | + | chr1_4:52824712-52824731 | Msa0169610:CDS | 25.0% |
! | TTTAAATGGTAAACAAGTAG+AGG | + | chr1_4:52824912-52824931 | Msa0169610:CDS | 25.0% |
!!! | AGTTTTAAATTGCGTGTTTA+TGG | + | chr1_4:52826043-52826062 | Msa0169610:intron | 25.0% |
! | TAGTGATAGTAAAAACTTTG+AGG | + | chr1_4:52826333-52826352 | Msa0169610:intron | 25.0% |
!! | AGCATATTGATTATATCAGT+TGG | + | chr1_4:52826597-52826616 | Msa0169610:three_prime_UTR | 25.0% |
!! | TCAAACAATTTTACTGTGAT+AGG | + | chr1_4:52826694-52826713 | Msa0169610:three_prime_UTR | 25.0% |
AAGAAGAATAAAGAGGAAGA+GGG | - | chr1_4:52823124-52823143 | None:intergenic | 30.0% | |
GAAGAAGAAGAAGAATAAAG+AGG | - | chr1_4:52823131-52823150 | None:intergenic | 30.0% | |
GAAGACAAACATGTTATTGA+TGG | + | chr1_4:52823481-52823500 | Msa0169610:CDS | 30.0% | |
! | TATACCCTTTTACCTATGTT+AGG | + | chr1_4:52823553-52823572 | Msa0169610:intron | 30.0% |
! | ATACCCTTTTACCTATGTTA+GGG | + | chr1_4:52823554-52823573 | Msa0169610:intron | 30.0% |
TAACCCTAACATAGGTAAAA+GGG | - | chr1_4:52823560-52823579 | None:intergenic | 30.0% | |
ATAACCCTAACATAGGTAAA+AGG | - | chr1_4:52823561-52823580 | None:intergenic | 30.0% | |
!!! | TCCTGTTTTTAGTTGTGAAT+TGG | + | chr1_4:52823641-52823660 | Msa0169610:intron | 30.0% |
TCCAATTCACAACTAAAAAC+AGG | - | chr1_4:52823645-52823664 | None:intergenic | 30.0% | |
!!! | TGTTTTTAGTTGTGAATTGG+AGG | + | chr1_4:52823644-52823663 | Msa0169610:intron | 30.0% |
!! | TTAAGGCTTTAATTTTGAGG+GGG | + | chr1_4:52823689-52823708 | Msa0169610:intron | 30.0% |
! | TTCATTGTAATTTTTGTGGG+TGG | + | chr1_4:52823727-52823746 | Msa0169610:intron | 30.0% |
! | TCATTGTAATTTTTGTGGGT+GGG | + | chr1_4:52823728-52823747 | Msa0169610:intron | 30.0% |
! | TTTTATGAGCTGTTTATCGA+TGG | + | chr1_4:52823819-52823838 | Msa0169610:intron | 30.0% |
!! | GGTACATTATTTTTCCATTG+TGG | + | chr1_4:52824060-52824079 | Msa0169610:intron | 30.0% |
TTAGTATACCTATTCCACAA+TGG | - | chr1_4:52824077-52824096 | None:intergenic | 30.0% | |
TTGTGGAATAGGTATACTAA+TGG | + | chr1_4:52824077-52824096 | Msa0169610:intron | 30.0% | |
TATGCAATAAGAAGGATTTC+AGG | - | chr1_4:52824264-52824283 | None:intergenic | 30.0% | |
AAGCTACATATGTTTATGAC+AGG | + | chr1_4:52824448-52824467 | Msa0169610:intron | 30.0% | |
TTAGGCTTATAATCGATAGT+GGG | - | chr1_4:52824572-52824591 | None:intergenic | 30.0% | |
! | ACCAAAAAGATATTTGTTGG+AGG | + | chr1_4:52824715-52824734 | Msa0169610:CDS | 30.0% |
! | CCAAAAAGATATTTGTTGGA+GGG | + | chr1_4:52824716-52824735 | Msa0169610:CDS | 30.0% |
!! | GTTTATTACTTTTGATACCG+AGG | + | chr1_4:52824852-52824871 | Msa0169610:CDS | 30.0% |
GTGGAAGTGATAATTCTTAT+GGG | + | chr1_4:52825490-52825509 | Msa0169610:CDS | 30.0% | |
CTATCAAAATTACTGCTGTT+GGG | - | chr1_4:52825787-52825806 | None:intergenic | 30.0% | |
ACTATCAAAATTACTGCTGT+TGG | - | chr1_4:52825788-52825807 | None:intergenic | 30.0% | |
! | TTGATAGTTAAATCTCTTGC+TGG | + | chr1_4:52825800-52825819 | Msa0169610:three_prime_UTR | 30.0% |
AGCTCATGTTGTAAGATTAA+CGG | - | chr1_4:52825849-52825868 | None:intergenic | 30.0% | |
CTTACAATGATTTCTTTCAG+CGG | + | chr1_4:52825867-52825886 | Msa0169610:three_prime_UTR | 30.0% | |
!!! | GTTTATGGTTTTAGTTGATC+TGG | + | chr1_4:52826058-52826077 | Msa0169610:intron | 30.0% |
!!! | TATTTGTGTTGTCGTTTTTG+TGG | + | chr1_4:52826149-52826168 | Msa0169610:intron | 30.0% |
! | TTGGTTTGATCACTTCATAA+TGG | + | chr1_4:52826285-52826304 | Msa0169610:intron | 30.0% |
! | GATAGTAAAAACTTTGAGGA+TGG | + | chr1_4:52826337-52826356 | Msa0169610:intron | 30.0% |
! | ATTTTATCACTTGAAAAGCC+AGG | - | chr1_4:52826521-52826540 | None:intergenic | 30.0% |
GAAGAAGAATAAAGAGGAAG+AGG | - | chr1_4:52823125-52823144 | None:intergenic | 35.0% | |
AGAGTAAGAGAGAGAGAAAA+AGG | + | chr1_4:52823265-52823284 | Msa0169610:five_prime_UTR | 35.0% | |
AAGAGAGAGAGAAAAAGGAA+TGG | + | chr1_4:52823270-52823289 | Msa0169610:exon | 35.0% | |
! | GAGAGAAAAAGGAATGGATT+CGG | + | chr1_4:52823276-52823295 | Msa0169610:exon | 35.0% |
! | GATCAAGGAAAGCTTTTCAT+CGG | + | chr1_4:52823298-52823317 | Msa0169610:CDS | 35.0% |
!! | AAGGAGCATTTCAGCAATTA+TGG | + | chr1_4:52823355-52823374 | Msa0169610:CDS | 35.0% |
AGATCCTTCTGTTCTTGATA+GGG | + | chr1_4:52823453-52823472 | Msa0169610:CDS | 35.0% | |
! | ACATGTTATTGATGGCAGAA+CGG | + | chr1_4:52823489-52823508 | Msa0169610:CDS | 35.0% |
CATTCACATAACCCTAACAT+AGG | - | chr1_4:52823568-52823587 | None:intergenic | 35.0% | |
!! | TTTTAGTTGTGAATTGGAGG+TGG | + | chr1_4:52823647-52823666 | Msa0169610:intron | 35.0% |
TTTAGTTGTGAATTGGAGGT+GGG | + | chr1_4:52823648-52823667 | Msa0169610:intron | 35.0% | |
!! | TAAGGCTTTAATTTTGAGGG+GGG | + | chr1_4:52823690-52823709 | Msa0169610:intron | 35.0% |
! | CATTGTAATTTTTGTGGGTG+GGG | + | chr1_4:52823729-52823748 | Msa0169610:intron | 35.0% |
TTTACAGCAAACAAAAGGCA+GGG | - | chr1_4:52823994-52824013 | None:intergenic | 35.0% | |
! | TTTTACAGCAAACAAAAGGC+AGG | - | chr1_4:52823995-52824014 | None:intergenic | 35.0% |
! | AATGTTGCATCATTGGTTGT+AGG | + | chr1_4:52824039-52824058 | Msa0169610:intron | 35.0% |
AGAAGGATTTCAGGAAAACA+AGG | - | chr1_4:52824255-52824274 | None:intergenic | 35.0% | |
!! | TTATAATCGATAGTGGGAAC+TGG | - | chr1_4:52824566-52824585 | None:intergenic | 35.0% |
GTTAGGCTTATAATCGATAG+TGG | - | chr1_4:52824573-52824592 | None:intergenic | 35.0% | |
! | CCCTCCAACAAATATCTTTT+TGG | - | chr1_4:52824719-52824738 | None:intergenic | 35.0% |
! | AATTTTTCTTCAGCCAGAGT+GGG | - | chr1_4:52824748-52824767 | None:intergenic | 35.0% |
AAAATTCCGTCAGTACTTTG+AGG | + | chr1_4:52824762-52824781 | Msa0169610:CDS | 35.0% | |
GTCATGTATGACCAAAATAC+TGG | + | chr1_4:52824811-52824830 | Msa0169610:CDS | 35.0% | |
!! | TATTACTTTTGATACCGAGG+AGG | + | chr1_4:52824855-52824874 | Msa0169610:CDS | 35.0% |
GGAAACCAAAATGCATATGA+TGG | + | chr1_4:52825045-52825064 | Msa0169610:CDS | 35.0% | |
! | AACGACCATCATATGCATTT+TGG | - | chr1_4:52825053-52825072 | None:intergenic | 35.0% |
GGTGGAAGTGATAATTCTTA+TGG | + | chr1_4:52825489-52825508 | Msa0169610:CDS | 35.0% | |
GATAATTCTTATGGGAATCC+AGG | + | chr1_4:52825498-52825517 | Msa0169610:CDS | 35.0% | |
TGACCACTAGCATTACTATT+TGG | - | chr1_4:52825561-52825580 | None:intergenic | 35.0% | |
AAATAGTAATGCTAGTGGTC+AGG | + | chr1_4:52825560-52825579 | Msa0169610:CDS | 35.0% | |
AATAGTAATGCTAGTGGTCA+GGG | + | chr1_4:52825561-52825580 | Msa0169610:CDS | 35.0% | |
ACAAATGGAAATTCTGGGTA+TGG | + | chr1_4:52825645-52825664 | Msa0169610:CDS | 35.0% | |
CTCAAGCATCTGGTAATTAT+GGG | + | chr1_4:52825694-52825713 | Msa0169610:CDS | 35.0% | |
GCTCATGTTGTAAGATTAAC+GGG | - | chr1_4:52825848-52825867 | None:intergenic | 35.0% | |
GTTCGATCTTCATACACAAT+GGG | + | chr1_4:52825900-52825919 | Msa0169610:three_prime_UTR | 35.0% | |
!!! | GGTTTTAGTTGATCTGGATT+TGG | + | chr1_4:52826064-52826083 | Msa0169610:intron | 35.0% |
CTGCATCAAACCATCATATA+AGG | - | chr1_4:52826128-52826147 | None:intergenic | 35.0% | |
CATGCTTTAACTGTTAGTAC+AGG | + | chr1_4:52826214-52826233 | Msa0169610:intron | 35.0% | |
GAAATAAGCTGATGTAGTTC+AGG | + | chr1_4:52826239-52826258 | Msa0169610:intron | 35.0% | |
TTCATAATGGCTAGCGATAA+TGG | + | chr1_4:52826298-52826317 | Msa0169610:intron | 35.0% | |
ACAACACAAGTGCAAATACA+GGG | - | chr1_4:52826377-52826396 | None:intergenic | 35.0% | |
TACAACACAAGTGCAAATAC+AGG | - | chr1_4:52826378-52826397 | None:intergenic | 35.0% | |
TATTTGCACTTGTGTTGTAC+AGG | + | chr1_4:52826379-52826398 | Msa0169610:intron | 35.0% | |
TTCAGTCTATTGTGCATTTC+TGG | + | chr1_4:52826468-52826487 | Msa0169610:three_prime_UTR | 35.0% | |
TCAGTCTATTGTGCATTTCT+GGG | + | chr1_4:52826469-52826488 | Msa0169610:three_prime_UTR | 35.0% | |
!! | CTCCAAATTTGATGATGTGA+TGG | - | chr1_4:52826495-52826514 | None:intergenic | 35.0% |
TCATCAAATTTGGAGATTCC+TGG | + | chr1_4:52826500-52826519 | Msa0169610:three_prime_UTR | 35.0% | |
! | GCTGTGACTCATTACAATTT+TGG | + | chr1_4:52826619-52826638 | Msa0169610:three_prime_UTR | 35.0% |
GAGTGTTAAAGTTCATGCTT+TGG | + | chr1_4:52826664-52826683 | Msa0169610:three_prime_UTR | 35.0% | |
TTTCACAGAAGCTGAAATGA+AGG | - | chr1_4:52826764-52826783 | None:intergenic | 35.0% | |
ATGCCAATATAAACCCTTGA+CGG | - | chr1_4:52826826-52826845 | None:intergenic | 35.0% | |
CTCTGTATATGAGAGAGAAG+AGG | - | chr1_4:52823086-52823105 | None:intergenic | 40.0% | |
AGAGAGAAGTTGAGGATTTG+GGG | - | chr1_4:52823171-52823190 | None:intergenic | 40.0% | |
GAGAGAGAAGTTGAGGATTT+GGG | - | chr1_4:52823172-52823191 | None:intergenic | 40.0% | |
AGAGAGAGAAGTTGAGGATT+TGG | - | chr1_4:52823173-52823192 | None:intergenic | 40.0% | |
! | AAAGGAATGGATTCGGATCA+AGG | + | chr1_4:52823283-52823302 | Msa0169610:exon | 40.0% |
! | AAGGAAAGCTTTTCATCGGT+GGG | + | chr1_4:52823302-52823321 | Msa0169610:CDS | 40.0% |
! | TTTTCATCGGTGGGATTTCA+TGG | + | chr1_4:52823311-52823330 | Msa0169610:CDS | 40.0% |
TTTCATCGGTGGGATTTCAT+GGG | + | chr1_4:52823312-52823331 | Msa0169610:CDS | 40.0% | |
GATTTCATGGGATACGAATG+AGG | + | chr1_4:52823324-52823343 | Msa0169610:CDS | 40.0% | |
GTTATGAGAGAGAAGAACAC+TGG | + | chr1_4:52823397-52823416 | Msa0169610:CDS | 40.0% | |
AAGAACACTGGTAAACCTAG+AGG | + | chr1_4:52823409-52823428 | Msa0169610:CDS | 40.0% | |
CAGATCCTTCTGTTCTTGAT+AGG | + | chr1_4:52823452-52823471 | Msa0169610:CDS | 40.0% | |
AGAACCCTATCAAGAACAGA+AGG | - | chr1_4:52823460-52823479 | None:intergenic | 40.0% | |
!!! | GATTGCGTGTTTGGTTTTCT+AGG | + | chr1_4:52823845-52823864 | Msa0169610:intron | 40.0% |
TGTAATAGAATTGAGCGGTG+CGG | + | chr1_4:52823958-52823977 | Msa0169610:intron | 40.0% | |
TTACAGCAAACAAAAGGCAG+GGG | - | chr1_4:52823993-52824012 | None:intergenic | 40.0% | |
AGGAGATACCTATTCCACAA+TGG | - | chr1_4:52824111-52824130 | None:intergenic | 40.0% | |
TTGTGGAATAGGTATCTCCT+TGG | + | chr1_4:52824111-52824130 | Msa0169610:intron | 40.0% | |
ATAGGTATCTCCTTGGTTGT+AGG | + | chr1_4:52824118-52824137 | Msa0169610:intron | 40.0% | |
! | CACTTTGGGAGAAGATACAT+TGG | + | chr1_4:52824197-52824216 | Msa0169610:intron | 40.0% |
! | ACACAACAGATCTAGCTTCA+AGG | - | chr1_4:52824387-52824406 | None:intergenic | 40.0% |
CTGGAAGTAAAGCAAACACA+GGG | - | chr1_4:52824547-52824566 | None:intergenic | 40.0% | |
ACTGGAAGTAAAGCAAACAC+AGG | - | chr1_4:52824548-52824567 | None:intergenic | 40.0% | |
!! | TTATTCAGGTTGATGCCAAG+AGG | + | chr1_4:52824611-52824630 | Msa0169610:intron | 40.0% |
!! | TATTCAGGTTGATGCCAAGA+GGG | + | chr1_4:52824612-52824631 | Msa0169610:intron | 40.0% |
GATCTCGAAGAGACAGAAAT+CGG | - | chr1_4:52824658-52824677 | None:intergenic | 40.0% | |
ATTTCTGTCTCTTCGAGATC+TGG | + | chr1_4:52824658-52824677 | Msa0169610:CDS | 40.0% | |
AGATCTGGAAACTCCAATTC+TGG | + | chr1_4:52824673-52824692 | Msa0169610:CDS | 40.0% | |
GATCTGGAAACTCCAATTCT+GGG | + | chr1_4:52824674-52824693 | Msa0169610:CDS | 40.0% | |
ATTTCCACCATTCCCAGAAT+TGG | - | chr1_4:52824689-52824708 | None:intergenic | 40.0% | |
! | GAATTTTTCTTCAGCCAGAG+TGG | - | chr1_4:52824749-52824768 | None:intergenic | 40.0% |
!! | CATAAGCCTCAAAGTACTGA+CGG | - | chr1_4:52824771-52824790 | None:intergenic | 40.0% |
GTAATAAACCCAAATCCTCG+TGG | - | chr1_4:52824841-52824860 | None:intergenic | 40.0% | |
ATGGTCGTTCAGATTCTAGT+AGG | + | chr1_4:52825064-52825083 | Msa0169610:CDS | 40.0% | |
AAGCAGCATTAGGGACATTT+GGG | - | chr1_4:52825269-52825288 | None:intergenic | 40.0% | |
TAAGCAGCATTAGGGACATT+TGG | - | chr1_4:52825270-52825289 | None:intergenic | 40.0% | |
GGATATGGGAATCAAGGTTA+CGG | + | chr1_4:52825441-52825460 | Msa0169610:CDS | 40.0% | |
GATATGGGAATCAAGGTTAC+GGG | + | chr1_4:52825442-52825461 | Msa0169610:CDS | 40.0% | |
TATGGGAATCCAGGTGTATA+TGG | + | chr1_4:52825507-52825526 | Msa0169610:CDS | 40.0% | |
GCTCCAAATAGTAATGCTAG+TGG | + | chr1_4:52825555-52825574 | Msa0169610:CDS | 40.0% | |
GGGACACAAATGGAAATTCT+GGG | + | chr1_4:52825640-52825659 | Msa0169610:CDS | 40.0% | |
GCTCAAGCATCTGGTAATTA+TGG | + | chr1_4:52825693-52825712 | Msa0169610:CDS | 40.0% | |
! | TGTTGTAAGATTAACGGGCA+GGG | - | chr1_4:52825843-52825862 | None:intergenic | 40.0% |
! | ATGTTGTAAGATTAACGGGC+AGG | - | chr1_4:52825844-52825863 | None:intergenic | 40.0% |
CGTTCGATCTTCATACACAA+TGG | + | chr1_4:52825899-52825918 | Msa0169610:three_prime_UTR | 40.0% | |
ATCTTCATACACAATGGGAC+TGG | + | chr1_4:52825905-52825924 | Msa0169610:three_prime_UTR | 40.0% | |
! | CAGGTATTTTCTGATAGCAG+TGG | + | chr1_4:52826258-52826277 | Msa0169610:intron | 40.0% |
AACACAAGTGCAAATACAGG+GGG | - | chr1_4:52826375-52826394 | None:intergenic | 40.0% | |
CAACACAAGTGCAAATACAG+GGG | - | chr1_4:52826376-52826395 | None:intergenic | 40.0% | |
TTCCTTAGCCATGATATGAG+TGG | - | chr1_4:52826440-52826459 | None:intergenic | 40.0% | |
GGCCATCACATCATCAAATT+TGG | + | chr1_4:52826490-52826509 | Msa0169610:three_prime_UTR | 40.0% | |
AAATGTCATAGCCTTCAACC+TGG | + | chr1_4:52826537-52826556 | Msa0169610:three_prime_UTR | 40.0% | |
TGAAATGAAGGAGAACTGCT+GGG | - | chr1_4:52826752-52826771 | None:intergenic | 40.0% | |
! | AATATAAACCCTTGACGGGT+AGG | - | chr1_4:52826821-52826840 | None:intergenic | 40.0% |
TACCCGTCAAGGGTTTATAT+TGG | + | chr1_4:52826820-52826839 | Msa0169610:three_prime_UTR | 40.0% | |
TGCCAATATAAACCCTTGAC+GGG | - | chr1_4:52826825-52826844 | None:intergenic | 40.0% | |
AAAGAGGAAGAGGGTTTCGA+GGG | - | chr1_4:52823115-52823134 | None:intergenic | 45.0% | |
TAAAGAGGAAGAGGGTTTCG+AGG | - | chr1_4:52823116-52823135 | None:intergenic | 45.0% | |
GAGAGAAGTTGAGGATTTGG+GGG | - | chr1_4:52823170-52823189 | None:intergenic | 45.0% | |
! | CAAGGAAAGCTTTTCATCGG+TGG | + | chr1_4:52823301-52823320 | Msa0169610:CDS | 45.0% |
TACGAATGAGGAGAAGCTGA+AGG | + | chr1_4:52823336-52823355 | Msa0169610:CDS | 45.0% | |
ACTGGTAAACCTAGAGGCTT+TGG | + | chr1_4:52823415-52823434 | Msa0169610:CDS | 45.0% | |
! | GTTATTGATGGCAGAACGGT+CGG | + | chr1_4:52823493-52823512 | Msa0169610:intron | 45.0% |
!! | CGATGGATTGATTGCGTGTT+TGG | + | chr1_4:52823836-52823855 | Msa0169610:intron | 45.0% |
CACTAACGTACCTACAACCA+AGG | - | chr1_4:52824131-52824150 | None:intergenic | 45.0% | |
GTTGTAGGTACGTTAGTGAC+AGG | + | chr1_4:52824133-52824152 | Msa0169610:intron | 45.0% | |
GTAAAGCAAACACAGGGTCT+GGG | - | chr1_4:52824541-52824560 | None:intergenic | 45.0% | |
AGTAAAGCAAACACAGGGTC+TGG | - | chr1_4:52824542-52824561 | None:intergenic | 45.0% | |
TCGAAGAGACAGAAATCGGT+TGG | - | chr1_4:52824654-52824673 | None:intergenic | 45.0% | |
! | GGAAACTCCAATTCTGGGAA+TGG | + | chr1_4:52824679-52824698 | Msa0169610:CDS | 45.0% |
! | AACTCCAATTCTGGGAATGG+TGG | + | chr1_4:52824682-52824701 | Msa0169610:CDS | 45.0% |
!! | CGTCAGTACTTTGAGGCTTA+TGG | + | chr1_4:52824769-52824788 | Msa0169610:CDS | 45.0% |
ATGGGTGGTTATCAAGGGTA+TGG | + | chr1_4:52825012-52825031 | Msa0169610:CDS | 45.0% | |
! | TATCAAGGGTATGGAGCTTC+TGG | + | chr1_4:52825021-52825040 | Msa0169610:CDS | 45.0% |
AAGCAGAGGATCCATAAGGT+GGG | - | chr1_4:52825122-52825141 | None:intergenic | 45.0% | |
TAAGCAGAGGATCCATAAGG+TGG | - | chr1_4:52825123-52825142 | None:intergenic | 45.0% | |
CCTTATGGATCCTCTGCTTA+CGG | + | chr1_4:52825123-52825142 | Msa0169610:CDS | 45.0% | |
TGCTGGATATGGGTATGGTT+CGG | + | chr1_4:52825152-52825171 | Msa0169610:CDS | 45.0% | |
CATATGCTGCACCATAACCA+AGG | - | chr1_4:52825188-52825207 | None:intergenic | 45.0% | |
CTTGGTTATGGTGCAGCATA+TGG | + | chr1_4:52825186-52825205 | Msa0169610:CDS | 45.0% | |
GGTGCAGCATATGGAAGTTA+TGG | + | chr1_4:52825195-52825214 | Msa0169610:CDS | 45.0% | |
GCAGCATATGGAAGTTATGG+TGG | + | chr1_4:52825198-52825217 | Msa0169610:CDS | 45.0% | |
CACCAGCATAAGCAGCATTA+GGG | - | chr1_4:52825278-52825297 | None:intergenic | 45.0% | |
AATCAAGGTTACGGGTATGG+TGG | + | chr1_4:52825450-52825469 | Msa0169610:CDS | 45.0% | |
!! | GTGTATATGGTGCTGTTGGT+GGG | + | chr1_4:52825520-52825539 | Msa0169610:CDS | 45.0% |
GGGGACACAAATGGAAATTC+TGG | + | chr1_4:52825639-52825658 | Msa0169610:CDS | 45.0% | |
TGGTAATTATGGGACTCCTC+AGG | + | chr1_4:52825704-52825723 | Msa0169610:CDS | 45.0% | |
GGTAATTATGGGACTCCTCA+GGG | + | chr1_4:52825705-52825724 | Msa0169610:CDS | 45.0% | |
TTCTGATAGCAGTGGACACT+TGG | + | chr1_4:52826266-52826285 | Msa0169610:intron | 45.0% | |
! | ATGGCTAGCGATAATGGTAG+CGG | + | chr1_4:52826304-52826323 | Msa0169610:intron | 45.0% |
!! | AGCGATAATGGTAGCGGTAA+TGG | + | chr1_4:52826310-52826329 | Msa0169610:intron | 45.0% |
TTGCACTTGTGTTGTACAGG+AGG | + | chr1_4:52826382-52826401 | Msa0169610:intron | 45.0% | |
CCATGATATGAGTGGACACT+TGG | - | chr1_4:52826432-52826451 | None:intergenic | 45.0% | |
CCAAGTGTCCACTCATATCA+TGG | + | chr1_4:52826429-52826448 | Msa0169610:three_prime_UTR | 45.0% | |
GTCCACTCATATCATGGCTA+AGG | + | chr1_4:52826435-52826454 | Msa0169610:three_prime_UTR | 45.0% | |
! | ATAGCCTTCAACCTGGTTTG+TGG | + | chr1_4:52826544-52826563 | Msa0169610:three_prime_UTR | 45.0% |
CTGAAATGAAGGAGAACTGC+TGG | - | chr1_4:52826753-52826772 | None:intergenic | 45.0% | |
!! | TATATAGATATATAAAAATT+GGG | - | chr1_4:52823216-52823235 | None:intergenic | 5.0% |
!! | ATATATAGATATATAAAAAT+TGG | - | chr1_4:52823217-52823236 | None:intergenic | 5.0% |
AGGATTTGGGGGTAGAAGAG+AGG | - | chr1_4:52823159-52823178 | None:intergenic | 50.0% | |
GCAGAGAGAGAGAGAAGTTG+AGG | - | chr1_4:52823179-52823198 | None:intergenic | 50.0% | |
! | ACCTAGAGGCTTTGGTTTCG+TGG | + | chr1_4:52823423-52823442 | Msa0169610:CDS | 50.0% |
ACCACGAAACCAAAGCCTCT+AGG | - | chr1_4:52823427-52823446 | None:intergenic | 50.0% | |
! | TTTGAGGGGGGTGTGTTTAG+TGG | + | chr1_4:52823702-52823721 | Msa0169610:intron | 50.0% |
CTCTCTTGAGAAAGCCCTCT+TGG | - | chr1_4:52824629-52824648 | None:intergenic | 50.0% | |
CAAGAGGGCTTTCTCAAGAG+AGG | + | chr1_4:52824627-52824646 | Msa0169610:CDS | 50.0% | |
! | TTTTCTTCAGCCAGAGTGGG+AGG | - | chr1_4:52824745-52824764 | None:intergenic | 50.0% |
! | CTCGTGGTCGTCCAGTATTT+TGG | - | chr1_4:52824825-52824844 | None:intergenic | 50.0% |
CAAAATACTGGACGACCACG+AGG | + | chr1_4:52824823-52824842 | Msa0169610:CDS | 50.0% | |
ATACCGAGGAGGCAGTTGAT+AGG | + | chr1_4:52824866-52824885 | Msa0169610:CDS | 50.0% | |
! | TACCGAGGAGGCAGTTGATA+GGG | + | chr1_4:52824867-52824886 | Msa0169610:CDS | 50.0% |
AACCCTATCAACTGCCTCCT+CGG | - | chr1_4:52824872-52824891 | None:intergenic | 50.0% | |
! | CACCAGGATTGGCATCCTTT+GGG | - | chr1_4:52824951-52824970 | None:intergenic | 50.0% |
ACGGCTATTTGCACCAGGAT+TGG | - | chr1_4:52824962-52824981 | None:intergenic | 50.0% | |
TCCTGGTGCAAATAGCCGTA+TGG | + | chr1_4:52824963-52824982 | Msa0169610:CDS | 50.0% | |
CCTGGTGCAAATAGCCGTAT+GGG | + | chr1_4:52824964-52824983 | Msa0169610:CDS | 50.0% | |
GCGGAATGGGTGGTTATCAA+GGG | + | chr1_4:52825007-52825026 | Msa0169610:CDS | 50.0% | |
CCGTAAGCAGAGGATCCATA+AGG | - | chr1_4:52825126-52825145 | None:intergenic | 50.0% | |
! | GCTAGCAATGGCCTTGGTTA+TGG | + | chr1_4:52825174-52825193 | Msa0169610:CDS | 50.0% |
GACCTGCTGCTGCAACATAT+GGG | + | chr1_4:52825241-52825260 | Msa0169610:CDS | 50.0% | |
TTCCCATATGTTGCAGCAGC+AGG | - | chr1_4:52825246-52825265 | None:intergenic | 50.0% | |
! | GTCCCTAATGCTGCTTATGC+TGG | + | chr1_4:52825273-52825292 | Msa0169610:CDS | 50.0% |
CCACCAGCATAAGCAGCATT+AGG | - | chr1_4:52825279-52825298 | None:intergenic | 50.0% | |
! | CCTAATGCTGCTTATGCTGG+TGG | + | chr1_4:52825276-52825295 | Msa0169610:CDS | 50.0% |
! | AATGCTGCTTATGCTGGTGG+TGG | + | chr1_4:52825279-52825298 | Msa0169610:CDS | 50.0% |
! | GGCTATGGCTCTATGGGTTA+CGG | + | chr1_4:52825336-52825355 | Msa0169610:CDS | 50.0% |
TTACGGTAACGCTGCTCCTT+GGG | + | chr1_4:52825353-52825372 | Msa0169610:CDS | 50.0% | |
GGGAATCAAGGTTACGGGTA+TGG | + | chr1_4:52825447-52825466 | Msa0169610:CDS | 50.0% | |
GGTTACGGGTATGGTGGTTA+TGG | + | chr1_4:52825456-52825475 | Msa0169610:CDS | 50.0% | |
TACGGGTATGGTGGTTATGG+CGG | + | chr1_4:52825459-52825478 | Msa0169610:CDS | 50.0% | |
CCAACAGCACCATATACACC+TGG | - | chr1_4:52825519-52825538 | None:intergenic | 50.0% | |
!! | CCAGGTGTATATGGTGCTGT+TGG | + | chr1_4:52825516-52825535 | Msa0169610:CDS | 50.0% |
!! | GGTGTATATGGTGCTGTTGG+TGG | + | chr1_4:52825519-52825538 | Msa0169610:CDS | 50.0% |
AGTAATGCTAGTGGTCAGGG+TGG | + | chr1_4:52825564-52825583 | Msa0169610:CDS | 50.0% | |
GGTAGTGAACTGCAAGGTAG+CGG | + | chr1_4:52825585-52825604 | Msa0169610:CDS | 50.0% | |
AGCTATATGGGCAGTGGCTA+TGG | + | chr1_4:52825618-52825637 | Msa0169610:CDS | 50.0% | |
GCTATATGGGCAGTGGCTAT+GGG | + | chr1_4:52825619-52825638 | Msa0169610:CDS | 50.0% | |
CTATATGGGCAGTGGCTATG+GGG | + | chr1_4:52825620-52825639 | Msa0169610:CDS | 50.0% | |
AGTGGCTATGGGGACACAAA+TGG | + | chr1_4:52825630-52825649 | Msa0169610:CDS | 50.0% | |
CTGGGTATGGAAATGCAGCT+TGG | + | chr1_4:52825658-52825677 | Msa0169610:CDS | 50.0% | |
TGCAGCTTGGAGATCTGAAC+AGG | + | chr1_4:52825671-52825690 | Msa0169610:CDS | 50.0% | |
TCTGAACAGGCTCAAGCATC+TGG | + | chr1_4:52825684-52825703 | Msa0169610:CDS | 50.0% | |
TATGGGACTCCTCAGGGAAA+TGG | + | chr1_4:52825711-52825730 | Msa0169610:CDS | 50.0% | |
ATGGGACTCCTCAGGGAAAT+GGG | + | chr1_4:52825712-52825731 | Msa0169610:CDS | 50.0% | |
CACTTGTGTTGTACAGGAGG+AGG | + | chr1_4:52826385-52826404 | Msa0169610:intron | 50.0% | |
!!! | GAGGTGCTCGAGTTTTGAAG+TGG | + | chr1_4:52826404-52826423 | Msa0169610:three_prime_UTR | 50.0% |
TGTGGTGGCTGACAGATTTG+TGG | + | chr1_4:52826562-52826581 | Msa0169610:three_prime_UTR | 50.0% | |
GTGGTGGCTGACAGATTTGT+GGG | + | chr1_4:52826563-52826582 | Msa0169610:three_prime_UTR | 50.0% | |
TGGTGGCTGACAGATTTGTG+GGG | + | chr1_4:52826564-52826583 | Msa0169610:three_prime_UTR | 50.0% | |
CTTTCTGTCCTACCCGTCAA+GGG | + | chr1_4:52826810-52826829 | Msa0169610:three_prime_UTR | 50.0% | |
GAAGAGGGTTTCGAGGGTTG+TGG | - | chr1_4:52823109-52823128 | None:intergenic | 55.0% | |
ACTGGACGACCACGAGGATT+TGG | + | chr1_4:52824829-52824848 | Msa0169610:CDS | 55.0% | |
CTGGACGACCACGAGGATTT+GGG | + | chr1_4:52824830-52824849 | Msa0169610:CDS | 55.0% | |
GGTAAAGCGTGCACTCCCAA+AGG | + | chr1_4:52824933-52824952 | Msa0169610:CDS | 55.0% | |
CTCCCAAAGGATGCCAATCC+TGG | + | chr1_4:52824946-52824965 | Msa0169610:CDS | 55.0% | |
! | GCACCAGGATTGGCATCCTT+TGG | - | chr1_4:52824952-52824971 | None:intergenic | 55.0% |
CCCATACGGCTATTTGCACC+AGG | - | chr1_4:52824967-52824986 | None:intergenic | 55.0% | |
GGTGCAAATAGCCGTATGGG+TGG | + | chr1_4:52824967-52824986 | Msa0169610:CDS | 55.0% | |
AATAGCCGTATGGGTGGTGC+TGG | + | chr1_4:52824973-52824992 | Msa0169610:CDS | 55.0% | |
GGCGGAATGGGTGGTTATCA+AGG | + | chr1_4:52825006-52825025 | Msa0169610:CDS | 55.0% | |
! | CAAGGGTATGGAGCTTCTGG+TGG | + | chr1_4:52825024-52825043 | Msa0169610:CDS | 55.0% |
AATCCACCTGCAGCGCTTTG+AGG | - | chr1_4:52825099-52825118 | None:intergenic | 55.0% | |
! | GCAGGTGGATTCCCACCTTA+TGG | + | chr1_4:52825108-52825127 | Msa0169610:CDS | 55.0% |
!! | TACGGTGCTGCTGCTGGATA+TGG | + | chr1_4:52825141-52825160 | Msa0169610:CDS | 55.0% |
!! | ACGGTGCTGCTGCTGGATAT+GGG | + | chr1_4:52825142-52825161 | Msa0169610:CDS | 55.0% |
GCTGCTGCTGGATATGGGTA+TGG | + | chr1_4:52825147-52825166 | Msa0169610:CDS | 55.0% | |
! | GGGTATGGTTCGGCTAGCAA+TGG | + | chr1_4:52825162-52825181 | Msa0169610:CDS | 55.0% |
AGGTCCTCCATAACCAGCAG+CGG | - | chr1_4:52825226-52825245 | None:intergenic | 55.0% | |
GGACCTGCTGCTGCAACATA+TGG | + | chr1_4:52825240-52825259 | Msa0169610:CDS | 55.0% | |
GAGCAGGCCATGAACTCCTT+GGG | - | chr1_4:52825305-52825324 | None:intergenic | 55.0% | |
TGAGCAGGCCATGAACTCCT+TGG | - | chr1_4:52825306-52825325 | None:intergenic | 55.0% | |
AAGGAGTTCATGGCCTGCTC+AGG | + | chr1_4:52825305-52825324 | Msa0169610:CDS | 55.0% | |
! | TCCCTCTGGCTATGGCTCTA+TGG | + | chr1_4:52825329-52825348 | Msa0169610:CDS | 55.0% |
CCCATAGAGCCATAGCCAGA+GGG | - | chr1_4:52825333-52825352 | None:intergenic | 55.0% | |
! | CCCTCTGGCTATGGCTCTAT+GGG | + | chr1_4:52825330-52825349 | Msa0169610:CDS | 55.0% |
ACCCATAGAGCCATAGCCAG+AGG | - | chr1_4:52825334-52825353 | None:intergenic | 55.0% | |
GTTACGGTAACGCTGCTCCT+TGG | + | chr1_4:52825352-52825371 | Msa0169610:CDS | 55.0% | |
TACGGTAACGCTGCTCCTTG+GGG | + | chr1_4:52825354-52825373 | Msa0169610:CDS | 55.0% | |
AGGTCAATCTCCCAGTGCAG+CGG | + | chr1_4:52825416-52825435 | Msa0169610:CDS | 55.0% | |
GCGGCTGGATATGGGAATCA+AGG | + | chr1_4:52825435-52825454 | Msa0169610:CDS | 55.0% | |
! | CAGGGTGGTAGTGAACTGCA+AGG | + | chr1_4:52825579-52825598 | Msa0169610:CDS | 55.0% |
! | AGTGAACTGCAAGGTAGCGG+TGG | + | chr1_4:52825588-52825607 | Msa0169610:CDS | 55.0% |
GGTGGCAGTGGCAGCTATAT+GGG | + | chr1_4:52825606-52825625 | Msa0169610:CDS | 55.0% | |
AGTGGCAGCTATATGGGCAG+TGG | + | chr1_4:52825612-52825631 | Msa0169610:CDS | 55.0% | |
TGGGACTCCTCAGGGAAATG+GGG | + | chr1_4:52825713-52825732 | Msa0169610:CDS | 55.0% | |
AATGGGGGGCAAGCTGGTTA+TGG | + | chr1_4:52825729-52825748 | Msa0169610:CDS | 55.0% | |
!! | GCTGGTTATGGTGGTGGCTA+TGG | + | chr1_4:52825741-52825760 | Msa0169610:CDS | 55.0% |
!! | GGTTATGGTGGTGGCTATGG+TGG | + | chr1_4:52825744-52825763 | Msa0169610:CDS | 55.0% |
CTGTTGGGCTTGTCGAGACT+GGG | - | chr1_4:52825772-52825791 | None:intergenic | 55.0% | |
! | GCCTTCAACCTGGTTTGTGG+TGG | + | chr1_4:52826547-52826566 | Msa0169610:three_prime_UTR | 55.0% |
! | GCCACCACAAACCAGGTTGA+AGG | - | chr1_4:52826551-52826570 | None:intergenic | 55.0% |
TCTGTCAGCCACCACAAACC+AGG | - | chr1_4:52826558-52826577 | None:intergenic | 55.0% | |
GGTGGCTGACAGATTTGTGG+GGG | + | chr1_4:52826565-52826584 | Msa0169610:three_prime_UTR | 55.0% | |
GCTGACAGATTTGTGGGGGA+TGG | + | chr1_4:52826569-52826588 | Msa0169610:three_prime_UTR | 55.0% | |
! | CCTTGACGGGTAGGACAGAA+AGG | - | chr1_4:52826812-52826831 | None:intergenic | 55.0% |
CCTTTCTGTCCTACCCGTCA+AGG | + | chr1_4:52826809-52826828 | Msa0169610:three_prime_UTR | 55.0% | |
CACCTCCAGCACCACCCATA+CGG | - | chr1_4:52824981-52825000 | None:intergenic | 60.0% | |
!! | TGGAGGTGGTAGTGGCGGAA+TGG | + | chr1_4:52824993-52825012 | Msa0169610:CDS | 60.0% |
!! | GGAGGTGGTAGTGGCGGAAT+GGG | + | chr1_4:52824994-52825013 | Msa0169610:CDS | 60.0% |
!! | ATGCAGCCTCAAAGCGCTGC+AGG | + | chr1_4:52825090-52825109 | Msa0169610:CDS | 60.0% |
AGCAGCAGCACCGTAAGCAG+AGG | - | chr1_4:52825136-52825155 | None:intergenic | 60.0% | |
!! | TCTGCTTACGGTGCTGCTGC+TGG | + | chr1_4:52825135-52825154 | Msa0169610:CDS | 60.0% |
GGTTCGGCTAGCAATGGCCT+TGG | + | chr1_4:52825168-52825187 | Msa0169610:CDS | 60.0% | |
!! | AGTTATGGTGGTGCCGCTGC+TGG | + | chr1_4:52825210-52825229 | Msa0169610:CDS | 60.0% |
!! | CTTATGCTGGTGGTGGCCCA+AGG | + | chr1_4:52825286-52825305 | Msa0169610:CDS | 60.0% |
GTGGTGGCCCAAGGAGTTCA+TGG | + | chr1_4:52825295-52825314 | Msa0169610:CDS | 60.0% | |
CCAGATCCAGCACCACCACT+TGG | - | chr1_4:52825384-52825403 | None:intergenic | 60.0% | |
! | CCAAGTGGTGGTGCTGGATC+TGG | + | chr1_4:52825381-52825400 | Msa0169610:CDS | 60.0% |
GGATCTGGTGCAGCAACTGC+AGG | + | chr1_4:52825396-52825415 | Msa0169610:CDS | 60.0% | |
CCATATCCAGCCGCTGCACT+GGG | - | chr1_4:52825429-52825448 | None:intergenic | 60.0% | |
CCAGTGCAGCGGCTGGATAT+GGG | + | chr1_4:52825427-52825446 | Msa0169610:CDS | 60.0% | |
GGGTATGGTGGTTATGGCGG+CGG | + | chr1_4:52825462-52825481 | Msa0169610:CDS | 60.0% | |
GGTATGGTGGTTATGGCGGC+GGG | + | chr1_4:52825463-52825482 | Msa0169610:CDS | 60.0% | |
! | GTGCTGTTGGTGGGCGTACT+GGG | + | chr1_4:52825529-52825548 | Msa0169610:CDS | 60.0% |
CGGTGGCAGTGGCAGCTATA+TGG | + | chr1_4:52825605-52825624 | Msa0169610:CDS | 60.0% | |
GGGACTCCTCAGGGAAATGG+GGG | + | chr1_4:52825714-52825733 | Msa0169610:CDS | 60.0% | |
GGACTCCTCAGGGAAATGGG+GGG | + | chr1_4:52825715-52825734 | Msa0169610:CDS | 60.0% | |
GGGCAAGCTGGTTATGGTGG+TGG | + | chr1_4:52825735-52825754 | Msa0169610:CDS | 60.0% | |
GCTGTTGGGCTTGTCGAGAC+TGG | - | chr1_4:52825773-52825792 | None:intergenic | 60.0% | |
TGGAGGGTTGCCTCCCACTC+TGG | + | chr1_4:52824732-52824751 | Msa0169610:CDS | 65.0% | |
! | AGCCGTATGGGTGGTGCTGG+AGG | + | chr1_4:52824976-52824995 | Msa0169610:CDS | 65.0% |
! | CGTATGGGTGGTGCTGGAGG+TGG | + | chr1_4:52824979-52824998 | Msa0169610:CDS | 65.0% |
! | GGTGGTGCTGGAGGTGGTAG+TGG | + | chr1_4:52824985-52825004 | Msa0169610:CDS | 65.0% |
!! | GGTGCTGGAGGTGGTAGTGG+CGG | + | chr1_4:52824988-52825007 | Msa0169610:CDS | 65.0% |
!! | GGTGGTAGTGGCGGAATGGG+TGG | + | chr1_4:52824997-52825016 | Msa0169610:CDS | 65.0% |
!! | CAGCCTCAAAGCGCTGCAGG+TGG | + | chr1_4:52825093-52825112 | Msa0169610:CDS | 65.0% |
!! | GGTGGTGCCGCTGCTGGTTA+TGG | + | chr1_4:52825216-52825235 | Msa0169610:CDS | 65.0% |
!! | GGTGCCGCTGCTGGTTATGG+AGG | + | chr1_4:52825219-52825238 | Msa0169610:CDS | 65.0% |
TAGCCAGAGGGAGCCTGAGC+AGG | - | chr1_4:52825321-52825340 | None:intergenic | 65.0% | |
GCTCAGGCTCCCTCTGGCTA+TGG | + | chr1_4:52825321-52825340 | Msa0169610:CDS | 65.0% | |
! | GCTCCTTGGGGTGCTCCAAG+TGG | + | chr1_4:52825366-52825385 | Msa0169610:CDS | 65.0% |
! | CCACCACTTGGAGCACCCCA+AGG | - | chr1_4:52825372-52825391 | None:intergenic | 65.0% |
! | CCTTGGGGTGCTCCAAGTGG+TGG | + | chr1_4:52825369-52825388 | Msa0169610:CDS | 65.0% |
! | GGTGCTCCAAGTGGTGGTGC+TGG | + | chr1_4:52825375-52825394 | Msa0169610:CDS | 65.0% |
CAATCTCCCAGTGCAGCGGC+TGG | + | chr1_4:52825420-52825439 | Msa0169610:CDS | 65.0% | |
CCCAGTGCAGCGGCTGGATA+TGG | + | chr1_4:52825426-52825445 | Msa0169610:CDS | 65.0% | |
CCCATATCCAGCCGCTGCAC+TGG | - | chr1_4:52825430-52825449 | None:intergenic | 65.0% | |
GGTGGTTATGGCGGCGGGTA+TGG | + | chr1_4:52825468-52825487 | Msa0169610:CDS | 65.0% | |
GGTTATGGCGGCGGGTATGG+TGG | + | chr1_4:52825471-52825490 | Msa0169610:CDS | 65.0% | |
!! | GGTGCTGTTGGTGGGCGTAC+TGG | + | chr1_4:52825528-52825547 | Msa0169610:CDS | 65.0% |
! | CTGCAAGGTAGCGGTGGCAG+TGG | + | chr1_4:52825594-52825613 | Msa0169610:CDS | 65.0% |
GCTTGCCCCCCATTTCCCTG+AGG | - | chr1_4:52825723-52825742 | None:intergenic | 65.0% | |
CAGGGAAATGGGGGGCAAGC+TGG | + | chr1_4:52825723-52825742 | Msa0169610:CDS | 65.0% | |
GGGGGGCAAGCTGGTTATGG+TGG | + | chr1_4:52825732-52825751 | Msa0169610:CDS | 65.0% | |
TGGCCTGCTCAGGCTCCCTC+TGG | + | chr1_4:52825315-52825334 | Msa0169610:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_4 | gene | 52823067 | 52826893 | 52823067 | ID=Msa0169610;Name=Msa0169610 |
chr1_4 | mRNA | 52823067 | 52826893 | 52823067 | ID=Msa0169610-mRNA-1;Parent=Msa0169610;Name=Msa0169610-mRNA-1;_AED=0.11;_eAED=0.11;_QI=222|1|1|1|0.5|0.33|3|622|466 |
chr1_4 | exon | 52823067 | 52823510 | 52823067 | ID=Msa0169610-mRNA-1:exon:15736;Parent=Msa0169610-mRNA-1 |
chr1_4 | exon | 52824619 | 52825926 | 52824619 | ID=Msa0169610-mRNA-1:exon:15737;Parent=Msa0169610-mRNA-1 |
chr1_4 | exon | 52826401 | 52826893 | 52826401 | ID=Msa0169610-mRNA-1:exon:15738;Parent=Msa0169610-mRNA-1 |
chr1_4 | five_prime_UTR | 52823067 | 52823288 | 52823067 | ID=Msa0169610-mRNA-1:five_prime_utr;Parent=Msa0169610-mRNA-1 |
chr1_4 | CDS | 52823289 | 52823510 | 52823289 | ID=Msa0169610-mRNA-1:cds;Parent=Msa0169610-mRNA-1 |
chr1_4 | CDS | 52824619 | 52825797 | 52824619 | ID=Msa0169610-mRNA-1:cds;Parent=Msa0169610-mRNA-1 |
chr1_4 | three_prime_UTR | 52825798 | 52825926 | 52825798 | ID=Msa0169610-mRNA-1:three_prime_utr;Parent=Msa0169610-mRNA-1 |
chr1_4 | three_prime_UTR | 52826401 | 52826893 | 52826401 | ID=Msa0169610-mRNA-1:three_prime_utr;Parent=Msa0169610-mRNA-1 |
Gene Sequence |
Protein sequence |