Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719400 | XP_003612685.1 | 93.822 | 259 | 8 | 1 | 1 | 251 | 1 | 259 | 1.22e-175 | 494 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719400 | sp|Q9C6X2|SCAM4_ARATH | 72.031 | 261 | 58 | 5 | 1 | 251 | 1 | 256 | 2.78e-133 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719400 | G7K9I4 | 93.822 | 259 | 8 | 1 | 1 | 251 | 1 | 259 | 5.83e-176 | 494 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0052610 | Msa0719400 | 0.851415 | 9.010956e-61 | -8.615850e-47 |
| Msa0057710 | Msa0719400 | 0.800909 | 1.155407e-48 | -8.615850e-47 |
| Msa0067870 | Msa0719400 | 0.820229 | 7.658578e-53 | -8.615850e-47 |
| Msa0093850 | Msa0719400 | 0.813791 | 2.140782e-51 | -8.615850e-47 |
| Msa0098470 | Msa0719400 | 0.806597 | 7.615891e-50 | -8.615850e-47 |
| Msa0103240 | Msa0719400 | 0.800685 | 1.283649e-48 | -8.615850e-47 |
| Msa0118710 | Msa0719400 | 0.811716 | 6.090620e-51 | -8.615850e-47 |
| Msa0620990 | Msa0719400 | 0.807930 | 3.972764e-50 | -8.615850e-47 |
| Msa0719400 | Msa0789650 | 0.964702 | 1.164579e-123 | -8.615850e-47 |
| Msa0719400 | Msa0804250 | 0.807501 | 4.901728e-50 | -8.615850e-47 |
| Msa0719400 | Msa1076560 | 0.817949 | 2.528377e-52 | -8.615850e-47 |
| Msa0719400 | Msa1186530 | 0.804081 | 2.563176e-49 | -8.615850e-47 |
| Msa0719400 | Msa1258710 | 0.825247 | 5.202966e-54 | -8.615850e-47 |
| Msa0719400 | Msa1297970 | 0.801934 | 7.122154e-49 | -8.615850e-47 |
| Msa0719400 | Msa1305280 | 0.805331 | 1.405551e-49 | -8.615850e-47 |
| Msa0719400 | Msa1305890 | 0.881646 | 2.019243e-70 | -8.615850e-47 |
| Msa0719400 | Msa1371520 | 0.802265 | 6.088957e-49 | -8.615850e-47 |
| Msa0719400 | Msa1373820 | 0.837561 | 4.835272e-57 | -8.615850e-47 |
| Msa0719400 | Msa1459460 | 0.829764 | 4.287589e-55 | -8.615850e-47 |
| Msa0130110 | Msa0719400 | 0.825354 | 4.907655e-54 | -8.615850e-47 |
| Msa0138360 | Msa0719400 | 0.802216 | 6.232360e-49 | -8.615850e-47 |
| Msa0167480 | Msa0719400 | 0.824170 | 9.332137e-54 | -8.615850e-47 |
| Msa0196190 | Msa0719400 | 0.817890 | 2.607279e-52 | -8.615850e-47 |
| Msa0435370 | Msa0719400 | 0.817524 | 3.154221e-52 | -8.615850e-47 |
| Msa0435420 | Msa0719400 | 0.814721 | 1.333445e-51 | -8.615850e-47 |
| Msa0435570 | Msa0719400 | 0.813337 | 2.693461e-51 | -8.615850e-47 |
| Msa0241830 | Msa0719400 | 0.807045 | 6.122987e-50 | -8.615850e-47 |
| Msa0249540 | Msa0719400 | 0.810429 | 1.158092e-50 | -8.615850e-47 |
| Msa0296250 | Msa0719400 | 0.829525 | 4.902621e-55 | -8.615850e-47 |
| Msa0302380 | Msa0719400 | 0.805172 | 1.517790e-49 | -8.615850e-47 |
| Msa0526540 | Msa0719400 | 0.803945 | 2.735380e-49 | -8.615850e-47 |
| Msa0527150 | Msa0719400 | 0.801412 | 9.116040e-49 | -8.615850e-47 |
| Msa0576940 | Msa0719400 | 0.802327 | 5.913396e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719400 | MtrunA17_Chr5g0409961 | 93.822 | 259 | 8 | 1 | 1 | 251 | 1 | 259 | 1.12e-179 | 494 |
| Msa0719400 | MtrunA17_Chr2g0281411 | 60.837 | 263 | 90 | 3 | 1 | 251 | 1 | 262 | 1.28e-117 | 338 |
| Msa0719400 | MtrunA17_Chr4g0022441 | 56.643 | 286 | 83 | 6 | 1 | 251 | 1 | 280 | 2.21e-104 | 305 |
| Msa0719400 | MtrunA17_Chr4g0047981 | 54.828 | 290 | 87 | 5 | 1 | 251 | 1 | 285 | 2.91e-100 | 294 |
| Msa0719400 | MtrunA17_Chr2g0323921 | 57.282 | 103 | 43 | 1 | 149 | 251 | 73 | 174 | 4.34e-34 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0719400 | AT1G32050.1 | 72.031 | 261 | 58 | 5 | 1 | 251 | 1 | 256 | 2.82e-134 | 379 |
| Msa0719400 | AT1G61250.1 | 62.264 | 265 | 84 | 5 | 1 | 251 | 1 | 263 | 9.61e-117 | 336 |
| Msa0719400 | AT1G61250.2 | 62.357 | 263 | 83 | 5 | 1 | 249 | 1 | 261 | 5.94e-115 | 331 |
| Msa0719400 | AT1G11180.1 | 59.176 | 267 | 91 | 5 | 1 | 251 | 1 | 265 | 1.24e-108 | 315 |
| Msa0719400 | AT1G11180.3 | 58.915 | 258 | 88 | 5 | 1 | 242 | 1 | 256 | 5.45e-103 | 301 |
| Msa0719400 | AT1G11180.2 | 56.089 | 271 | 88 | 5 | 1 | 242 | 1 | 269 | 8.62e-101 | 295 |
| Msa0719400 | AT2G20840.1 | 58.397 | 262 | 92 | 5 | 1 | 251 | 1 | 256 | 5.36e-100 | 293 |
| Msa0719400 | AT1G03550.1 | 57.143 | 259 | 94 | 4 | 5 | 251 | 4 | 257 | 1.71e-98 | 289 |
| Msa0719400 | AT1G03550.4 | 57.198 | 257 | 93 | 4 | 5 | 249 | 4 | 255 | 8.36e-97 | 284 |
| Msa0719400 | AT2G20840.3 | 64.019 | 214 | 68 | 2 | 46 | 251 | 1 | 213 | 8.93e-93 | 273 |
| Msa0719400 | AT2G20840.2 | 64.019 | 214 | 68 | 2 | 46 | 251 | 1 | 213 | 8.93e-93 | 273 |
| Msa0719400 | AT1G03550.5 | 56.356 | 236 | 86 | 4 | 5 | 228 | 4 | 234 | 1.78e-85 | 255 |
| Msa0719400 | AT1G03550.3 | 59.898 | 197 | 71 | 1 | 63 | 251 | 2 | 198 | 5.09e-81 | 243 |
| Msa0719400 | AT1G03550.6 | 57.991 | 219 | 75 | 4 | 5 | 211 | 4 | 217 | 2.27e-80 | 241 |
| Msa0719400 | AT1G03550.2 | 59.783 | 184 | 66 | 1 | 76 | 251 | 15 | 198 | 9.19e-75 | 227 |
| Msa0719400 | AT1G03550.7 | 55.051 | 198 | 72 | 4 | 5 | 190 | 4 | 196 | 3.46e-71 | 217 |
Find 64 sgRNAs with CRISPR-Local
Find 410 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATTTAGAATACCGAAAA+TGG | 0.190870 | 5_1:+14660900 | None:intergenic |
| TCTAAGCTTGTGGGTAATTC+AGG | 0.236939 | 5_1:-14655346 | Msa0719400:intron |
| ATATTCTATTTGATTGGATT+TGG | 0.268724 | 5_1:-14655390 | Msa0719400:CDS |
| CTTATTTGGAACGCGGGATT+TGG | 0.321167 | 5_1:+14661075 | None:intergenic |
| TTACAGATATTCTATTTGAT+TGG | 0.329574 | 5_1:-14655396 | Msa0719400:intron |
| TTCCCCTTTCATATGTGCTT+TGG | 0.332783 | 5_1:-14657596 | Msa0719400:CDS |
| TGCTCAGAGACTGCAATATT+CGG | 0.352061 | 5_1:-14658211 | Msa0719400:CDS |
| TCTTCTTCTTCGAAAGGATT+GGG | 0.387663 | 5_1:+14660930 | None:intergenic |
| CGTGGGAAGCTGATTTAAAA+AGG | 0.387765 | 5_1:-14658675 | Msa0719400:CDS |
| TTCTTCTTCTTCGAAAGGAT+TGG | 0.394848 | 5_1:+14660929 | None:intergenic |
| TCTCAGACCACGTATTGGTT+GGG | 0.395551 | 5_1:-14656298 | Msa0719400:CDS |
| TTTCATATGTGCTTTGGTAC+AGG | 0.399767 | 5_1:-14657590 | Msa0719400:CDS |
| GCATCCGAACCAGCTGGCTT+TGG | 0.401082 | 5_1:-14658870 | Msa0719400:CDS |
| TCGGCCTTTGCTAGTTGGTT+GGG | 0.403870 | 5_1:-14658192 | Msa0719400:intron |
| TTGACCAAAGCCAGCTGGTT+CGG | 0.405801 | 5_1:+14658866 | None:intergenic |
| GGGATCGTGGTTGCGATTCA+TGG | 0.420493 | 5_1:+14660950 | None:intergenic |
| TGCAGTCTCTGAGCATGAAC+TGG | 0.423052 | 5_1:+14658219 | None:intergenic |
| GCAATATCATGGTGAATGAT+TGG | 0.423895 | 5_1:+14658252 | None:intergenic |
| GGAGGCTCTTCTAAGCTTGT+GGG | 0.431780 | 5_1:-14655355 | Msa0719400:CDS |
| AATATTCGGCCTTTGCTAGT+TGG | 0.435604 | 5_1:-14658197 | Msa0719400:CDS |
| TGGAGGCTCTTCTAAGCTTG+TGG | 0.440195 | 5_1:-14655356 | Msa0719400:CDS |
| TTCGGCCTTTGCTAGTTGGT+TGG | 0.440836 | 5_1:-14658193 | Msa0719400:CDS |
| TTCTCAGACCACGTATTGGT+TGG | 0.447981 | 5_1:-14656299 | Msa0719400:CDS |
| GCAGTGATTTATGCGCTGCT+TGG | 0.452548 | 5_1:-14657621 | Msa0719400:intron |
| GGCCAATTCTTATCATCAAC+GGG | 0.453219 | 5_1:+14658285 | None:intergenic |
| CAGTGATTTATGCGCTGCTT+GGG | 0.460483 | 5_1:-14657620 | Msa0719400:CDS |
| CTTCGAAAGGATTGGGATCG+TGG | 0.477745 | 5_1:+14660937 | None:intergenic |
| TTTACCTCATAGCACGATAG+AGG | 0.479958 | 5_1:+14657565 | None:intergenic |
| AGCATGAACTGGAATCTCAT+TGG | 0.500620 | 5_1:+14658230 | None:intergenic |
| CAATATCATGGTGAATGATT+GGG | 0.504058 | 5_1:+14658253 | None:intergenic |
| TTGACTTCTTCTTCTTCGAA+AGG | 0.504243 | 5_1:+14660924 | None:intergenic |
| TGCCCGTTGATGATAAGAAT+TGG | 0.505693 | 5_1:-14658287 | Msa0719400:CDS |
| CTCAGACCACGTATTGGTTG+GGG | 0.512971 | 5_1:-14656297 | Msa0719400:intron |
| TGCGACAGTTGACATTCCTC+TGG | 0.513711 | 5_1:-14658835 | Msa0719400:CDS |
| GAATCTCATTGGCAATATCA+TGG | 0.518037 | 5_1:+14658241 | None:intergenic |
| GTACCAAAGCACATATGAAA+GGG | 0.521793 | 5_1:+14657593 | None:intergenic |
| AGTGATTCTCTCAACACATT+CGG | 0.525747 | 5_1:-14661008 | Msa0719400:five_prime_UTR |
| AGAGAAGATTCTGTTGCTAA+AGG | 0.528658 | 5_1:-14658427 | Msa0719400:intron |
| AGGTCAAGAGCTAGCAGCGT+GGG | 0.541856 | 5_1:-14658692 | Msa0719400:CDS |
| GGCCCCTCTATCGTGCTATG+AGG | 0.544924 | 5_1:-14657569 | Msa0719400:intron |
| GAATTCTTACAGAATGGTGT+TGG | 0.545034 | 5_1:-14658918 | Msa0719400:intron |
| TGTCTTTGACCAAAGCCAGC+TGG | 0.546049 | 5_1:+14658861 | None:intergenic |
| GTCTGTTGGATCAGAGGCGG+CGG | 0.547601 | 5_1:-14657753 | Msa0719400:intron |
| ATAGTGCACTGAAGTTCAGT+TGG | 0.551173 | 5_1:-14657356 | Msa0719400:CDS |
| TGTGTTCTCAGACCACGTAT+TGG | 0.565510 | 5_1:-14656303 | Msa0719400:CDS |
| AAAATCACGTGTTCCACCGT+TGG | 0.568521 | 5_1:-14658892 | Msa0719400:CDS |
| CCGTTGGCATCCGAACCAGC+TGG | 0.574974 | 5_1:-14658876 | Msa0719400:CDS |
| AGGCCAATTCTTATCATCAA+CGG | 0.578386 | 5_1:+14658284 | None:intergenic |
| TTTCTGCTTATTTGGAACGC+GGG | 0.580576 | 5_1:+14661069 | None:intergenic |
| TTACCTCATAGCACGATAGA+GGG | 0.588141 | 5_1:+14657566 | None:intergenic |
| GTGATTGTCTGTTGGATCAG+AGG | 0.588719 | 5_1:-14657759 | Msa0719400:CDS |
| TGTACCAAAGCACATATGAA+AGG | 0.589686 | 5_1:+14657592 | None:intergenic |
| TAGTTGCAGTGATTGTCTGT+TGG | 0.598374 | 5_1:-14657767 | Msa0719400:CDS |
| CCAGCTGGTTCGGATGCCAA+CGG | 0.610993 | 5_1:+14658876 | None:intergenic |
| AGAACACATCAATCGCTGCA+AGG | 0.643697 | 5_1:+14656318 | None:intergenic |
| ATTGTCTGTTGGATCAGAGG+CGG | 0.648321 | 5_1:-14657756 | Msa0719400:CDS |
| GCTGGTTCGGATGCCAACGG+TGG | 0.652702 | 5_1:+14658879 | None:intergenic |
| CATACCCAACCAACTAGCAA+AGG | 0.654872 | 5_1:+14658188 | None:intergenic |
| ATTACATTTGAAGTATCCAG+AGG | 0.656460 | 5_1:+14658819 | None:intergenic |
| TACCAAAGCACATATGAAAG+GGG | 0.656856 | 5_1:+14657594 | None:intergenic |
| AACTTACCCCAACCAATACG+TGG | 0.657661 | 5_1:+14656291 | None:intergenic |
| TACCTCATAGCACGATAGAG+GGG | 0.671746 | 5_1:+14657567 | None:intergenic |
| AAGGTCAAGAGCTAGCAGCG+TGG | 0.719415 | 5_1:-14658693 | Msa0719400:CDS |
| TCAGAGTGTGATAGTGCATG+CGG | 0.730430 | 5_1:+14661031 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATACTAAAAATAGAAAT+GGG | + | chr5_1:14654571-14654590 | None:intergenic | 10.0% |
| !! | AAAAATACTAAAAATAGAAA+TGG | + | chr5_1:14654572-14654591 | None:intergenic | 10.0% |
| !!! | ATTAATAAATTTAAAATTGC+AGG | - | chr5_1:14659042-14659061 | Msa0719400:intron | 10.0% |
| !!! | TTAATAAATTTAAAATTGCA+GGG | - | chr5_1:14659043-14659062 | Msa0719400:intron | 10.0% |
| !! | AATTACAGAATATATATAAA+TGG | + | chr5_1:14659263-14659282 | None:intergenic | 10.0% |
| !! | AAATACTAAAAATAGAAATG+GGG | + | chr5_1:14654570-14654589 | None:intergenic | 15.0% |
| !! | AAGTTCTCTAATAAAAATAT+CGG | + | chr5_1:14655553-14655572 | None:intergenic | 15.0% |
| !!! | TTTTTATTAGAGAACTTATA+AGG | - | chr5_1:14655556-14655575 | Msa0719400:intron | 15.0% |
| !!! | AAAATTCTTTTATATAATCG+GGG | + | chr5_1:14655587-14655606 | None:intergenic | 15.0% |
| !!! | CAAAATTCTTTTATATAATC+GGG | + | chr5_1:14655588-14655607 | None:intergenic | 15.0% |
| !!! | GCAAAATTCTTTTATATAAT+CGG | + | chr5_1:14655589-14655608 | None:intergenic | 15.0% |
| !! | ATTTAATGTAAAGAAATAAG+AGG | + | chr5_1:14655636-14655655 | None:intergenic | 15.0% |
| !! | ATATTAGATAATATACACAT+TGG | + | chr5_1:14655926-14655945 | None:intergenic | 15.0% |
| !! | GATAAAAACTTAAATATGAT+TGG | + | chr5_1:14656353-14656372 | None:intergenic | 15.0% |
| !! | ATAACTAAAATGAAACAAAA+AGG | + | chr5_1:14656421-14656440 | None:intergenic | 15.0% |
| !!! | ATTTAAGATTCTTTTTGATA+GGG | - | chr5_1:14656623-14656642 | Msa0719400:intron | 15.0% |
| !! | ATTCTTTATGATGTTTATTT+AGG | - | chr5_1:14656657-14656676 | Msa0719400:intron | 15.0% |
| !! | TTCTTTATGATGTTTATTTA+GGG | - | chr5_1:14656658-14656677 | Msa0719400:intron | 15.0% |
| !! | AGTTTACTTAATTAATAGTA+GGG | - | chr5_1:14658435-14658454 | Msa0719400:CDS | 15.0% |
| !!! | TAAAAGTTGAAGATTTTTAT+CGG | - | chr5_1:14658492-14658511 | Msa0719400:intron | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+CGG | + | chr5_1:14658661-14658680 | None:intergenic | 15.0% |
| !!! | TAATAAATTTAAAATTGCAG+GGG | - | chr5_1:14659044-14659063 | Msa0719400:intron | 15.0% |
| !!! | ATTTTTATTTACATTGTTCT+AGG | - | chr5_1:14660096-14660115 | Msa0719400:intron | 15.0% |
| !!! | TTTCAAGTTAGAATCAATTA+CGG | - | chr5_1:14654974-14654993 | Msa0719400:intron | 20.0% |
| !! | TGCTTTCTTAAAAAAAATTG+AGG | - | chr5_1:14655430-14655449 | Msa0719400:intron | 20.0% |
| !! | GCTTTCTTAAAAAAAATTGA+GGG | - | chr5_1:14655431-14655450 | Msa0719400:intron | 20.0% |
| !!! | GAATGTATTTTGACATTATT+AGG | - | chr5_1:14655509-14655528 | Msa0719400:intron | 20.0% |
| !! | AATAATAGCAGTATTATTCT+CGG | - | chr5_1:14655710-14655729 | Msa0719400:intron | 20.0% |
| !!! | TATCGATTATTAGAAATTGT+AGG | - | chr5_1:14655848-14655867 | Msa0719400:intron | 20.0% |
| !! | ATTTAAATACTGCATCTATA+AGG | + | chr5_1:14655973-14655992 | None:intergenic | 20.0% |
| !!! | TGTTTCATTAAGTTTTCAAA+GGG | - | chr5_1:14656101-14656120 | Msa0719400:intron | 20.0% |
| !!! | TTTTTATCCAAAGTACAAAT+TGG | - | chr5_1:14656365-14656384 | Msa0719400:intron | 20.0% |
| !!! | CATTTAAGATTCTTTTTGAT+AGG | - | chr5_1:14656622-14656641 | Msa0719400:intron | 20.0% |
| !!! | TTTAAGATTCTTTTTGATAG+GGG | - | chr5_1:14656624-14656643 | Msa0719400:intron | 20.0% |
| !! | TCTTTATGATGTTTATTTAG+GGG | - | chr5_1:14656659-14656678 | Msa0719400:intron | 20.0% |
| !! | TATTTAAACTGTAAACACAT+AGG | - | chr5_1:14657885-14657904 | Msa0719400:intron | 20.0% |
| !! | ATTTAAACTGTAAACACATA+GGG | - | chr5_1:14657886-14657905 | Msa0719400:intron | 20.0% |
| !! | TAACAAAAGAATTAGTAAGT+CGG | + | chr5_1:14658118-14658137 | None:intergenic | 20.0% |
| !! | GAGTTTACTTAATTAATAGT+AGG | - | chr5_1:14658434-14658453 | Msa0719400:CDS | 20.0% |
| !!! | AAAAGTTGAAGATTTTTATC+GGG | - | chr5_1:14658493-14658512 | Msa0719400:intron | 20.0% |
| !!! | TTATGGGTTAAATATGTTTT+TGG | + | chr5_1:14658550-14658569 | None:intergenic | 20.0% |
| !! | TTTAACCCATAAGAAAAAAT+TGG | - | chr5_1:14658558-14658577 | Msa0719400:intron | 20.0% |
| !!! | ATGATCCAATTTTTTCTTAT+GGG | + | chr5_1:14658566-14658585 | None:intergenic | 20.0% |
| !! | AAATGGATAATATTACAACT+TGG | + | chr5_1:14659246-14659265 | None:intergenic | 20.0% |
| !! | TATTCTGTAATTTAAACCTA+AGG | - | chr5_1:14659271-14659290 | Msa0719400:intron | 20.0% |
| !! | ATTCTGTAATTTAAACCTAA+GGG | - | chr5_1:14659272-14659291 | Msa0719400:intron | 20.0% |
| !! | GAAATTCAAAATGAAAAGTA+GGG | + | chr5_1:14659886-14659905 | None:intergenic | 20.0% |
| !! | AGAAATTCAAAATGAAAAGT+AGG | + | chr5_1:14659887-14659906 | None:intergenic | 20.0% |
| !!! | AATTTCTTATGTAATTTGTG+CGG | - | chr5_1:14659900-14659919 | Msa0719400:intron | 20.0% |
| !! | AAGAATACCAATAATATTGA+TGG | + | chr5_1:14659974-14659993 | None:intergenic | 20.0% |
| !! | TTACAGATATTCTATTTGAT+TGG | - | chr5_1:14659992-14660011 | Msa0719400:intron | 20.0% |
| !! | ATATTCTATTTGATTGGATT+TGG | - | chr5_1:14659998-14660017 | Msa0719400:intron | 20.0% |
| !! | AGAAATATTGTGTTGAAAAA+TGG | + | chr5_1:14660486-14660505 | None:intergenic | 20.0% |
| !!! | AATATTTCTATTGCAAAGAA+TGG | - | chr5_1:14660497-14660516 | Msa0719400:intron | 20.0% |
| !! | AAGATGATTGATTAAAAACT+AGG | - | chr5_1:14660522-14660541 | Msa0719400:intron | 20.0% |
| !! | AAACTAGGATTTAAATACAA+AGG | - | chr5_1:14660537-14660556 | Msa0719400:intron | 20.0% |
| !! | TTTGATATGCATATATGTAT+TGG | - | chr5_1:14661016-14661035 | Msa0719400:five_prime_UTR | 20.0% |
| !!! | GATTTGCTGTTAAAAAAAAA+TGG | + | chr5_1:14661085-14661104 | None:intergenic | 20.0% |
| !! | TTGATTTAGAATACCGAAAA+TGG | + | chr5_1:14654491-14654510 | None:intergenic | 25.0% |
| !! | TGTGATTCGTTATTTGATTT+CGG | - | chr5_1:14654658-14654677 | Msa0719400:intron | 25.0% |
| !! | TTCAAGTTAGAATCAATTAC+GGG | - | chr5_1:14654975-14654994 | Msa0719400:intron | 25.0% |
| !! | CAAAATCAATTTTATGTGTC+TGG | - | chr5_1:14655005-14655024 | Msa0719400:intron | 25.0% |
| !!! | TTCTGTTTTGTTTTGATTGT+TGG | - | chr5_1:14655084-14655103 | Msa0719400:intron | 25.0% |
| !! | TTTGATTGTTGGTAGAAAAT+AGG | - | chr5_1:14655095-14655114 | Msa0719400:intron | 25.0% |
| ! | TATTAGAGAAACCATTAGAA+AGG | - | chr5_1:14655228-14655247 | Msa0719400:intron | 25.0% |
| !!! | TTGTTGTTGTTTTGATTGTT+GGG | - | chr5_1:14655364-14655383 | Msa0719400:CDS | 25.0% |
| ! | AATGATTGACACAATAATTC+AGG | - | chr5_1:14655403-14655422 | Msa0719400:intron | 25.0% |
| ! | ATGATTGACACAATAATTCA+GGG | - | chr5_1:14655404-14655423 | Msa0719400:intron | 25.0% |
| ! | ATAATACTGCTATTATTGCT+AGG | + | chr5_1:14655707-14655726 | None:intergenic | 25.0% |
| ! | AGTTGTCTATAATTATCTCT+AGG | - | chr5_1:14655777-14655796 | Msa0719400:intron | 25.0% |
| ! | ATGCAGTATTTAAATTCCAA+TGG | - | chr5_1:14655978-14655997 | Msa0719400:intron | 25.0% |
| !! | CTGTTTCATTAAGTTTTCAA+AGG | - | chr5_1:14656100-14656119 | Msa0719400:intron | 25.0% |
| ! | CACAAATAGTTTCTATTAGA+TGG | + | chr5_1:14656184-14656203 | None:intergenic | 25.0% |
| !! | TTAGTTCTTAGGAATTAACA+AGG | + | chr5_1:14656287-14656306 | None:intergenic | 25.0% |
| !! | AGACATTAAAGTTAGTTCTT+AGG | + | chr5_1:14656298-14656317 | None:intergenic | 25.0% |
| ! | AAAACTACCAATTTGTACTT+TGG | + | chr5_1:14656375-14656394 | None:intergenic | 25.0% |
| !!! | GTACAAATTGGTAGTTTTTT+TGG | - | chr5_1:14656377-14656396 | Msa0719400:intron | 25.0% |
| !! | GTTTTTCATTCTGTTTATTG+TGG | - | chr5_1:14656448-14656467 | Msa0719400:intron | 25.0% |
| ! | CTTTATGATGTTTATTTAGG+GGG | - | chr5_1:14656660-14656679 | Msa0719400:intron | 25.0% |
| !!! | TTTTGAATTTTTTTAGCTGC+TGG | - | chr5_1:14656750-14656769 | Msa0719400:intron | 25.0% |
| !! | AATGAAATGAGATGTTTTCT+TGG | - | chr5_1:14657403-14657422 | Msa0719400:intron | 25.0% |
| ! | GGAATAAAAGATAATTAGAC+AGG | + | chr5_1:14657554-14657573 | None:intergenic | 25.0% |
| ! | AACATGGTAATATCTTGTAA+TGG | + | chr5_1:14658086-14658105 | None:intergenic | 25.0% |
| !!! | GATGATCCAATTTTTTCTTA+TGG | + | chr5_1:14658567-14658586 | None:intergenic | 25.0% |
| !!! | AAGACCAAAATGTTTTGAAA+GGG | + | chr5_1:14658906-14658925 | None:intergenic | 25.0% |
| !!! | AAAGACCAAAATGTTTTGAA+AGG | + | chr5_1:14658907-14658926 | None:intergenic | 25.0% |
| ! | TTTCATTTCCATGTAGTTAT+TGG | - | chr5_1:14659612-14659631 | Msa0719400:intron | 25.0% |
| ! | CATCTCTTCATCTAAATTAA+AGG | + | chr5_1:14659691-14659710 | None:intergenic | 25.0% |
| !! | ATGAAGAGATGTAAATTTTG+TGG | - | chr5_1:14659700-14659719 | Msa0719400:intron | 25.0% |
| !! | TGAAGAGATGTAAATTTTGT+GGG | - | chr5_1:14659701-14659720 | Msa0719400:intron | 25.0% |
| ! | TGTATTAGATCAAAATGATC+TGG | - | chr5_1:14659773-14659792 | Msa0719400:intron | 25.0% |
| !!! | ATGCATTTTTTTATCGCATT+TGG | - | chr5_1:14659825-14659844 | Msa0719400:intron | 25.0% |
| ! | CTTTGATCCATCAATATTAT+TGG | - | chr5_1:14659964-14659983 | Msa0719400:intron | 25.0% |
| ! | TTATAGAACTATAGACAACA+GGG | - | chr5_1:14660214-14660233 | Msa0719400:intron | 25.0% |
| ! | TAAAAGTAGTAGTTTCGTAA+TGG | - | chr5_1:14660413-14660432 | Msa0719400:intron | 25.0% |
| ! | TGATTGAAATATTTGTCTGA+TGG | - | chr5_1:14660692-14660711 | Msa0719400:intron | 25.0% |
| !! | AGAGAATATACATGTTTTTC+CGG | - | chr5_1:14660744-14660763 | Msa0719400:intron | 25.0% |
| ! | GAGAAAAAAGAGAATATACT+AGG | + | chr5_1:14660841-14660860 | None:intergenic | 25.0% |
| ! | AACGCAATTTTCTGCTTATT+TGG | + | chr5_1:14654330-14654349 | None:intergenic | 30.0% |
| ! | AGAAGAAGTCAATCCATTTT+CGG | - | chr5_1:14654475-14654494 | Msa0719400:intron | 30.0% |
| ! | TTGAATTTGAGATTGCGAAT+CGG | - | chr5_1:14654745-14654764 | Msa0719400:intron | 30.0% |
| ! | GAATTTAGTTTCGATGTTTG+TGG | - | chr5_1:14654772-14654791 | Msa0719400:intron | 30.0% |
| GAAATGTAGGTTTGTGAATT+AGG | - | chr5_1:14654811-14654830 | Msa0719400:intron | 30.0% | |
| TAGGTTTGTGAATTAGGTTA+TGG | - | chr5_1:14654817-14654836 | Msa0719400:intron | 30.0% | |
| TTGAGTGTAAAAATCACGTT+TGG | - | chr5_1:14654929-14654948 | Msa0719400:intron | 30.0% | |
| ! | TACTGTTTGATTTCACAGTA+GGG | + | chr5_1:14655047-14655066 | None:intergenic | 30.0% |
| AAAATAGGCTTAGATGGTTT+GGG | - | chr5_1:14655110-14655129 | Msa0719400:intron | 30.0% | |
| ! | GTTTCTCTAATAGTTTTCCT+AGG | + | chr5_1:14655220-14655239 | None:intergenic | 30.0% |
| !! | AACCATTAGAAAGGTTTTAG+AGG | - | chr5_1:14655237-14655256 | Msa0719400:intron | 30.0% |
| !! | AACCTCTAAAACCTTTCTAA+TGG | + | chr5_1:14655242-14655261 | None:intergenic | 30.0% |
| ! | TAATGAGTTGGATCCAAATT+TGG | - | chr5_1:14655261-14655280 | Msa0719400:intron | 30.0% |
| !!! | GTTGTTGTTGTTTTGATTGT+TGG | - | chr5_1:14655363-14655382 | Msa0719400:CDS | 30.0% |
| ! | AAGAATTTTGCACAACTTTG+AGG | - | chr5_1:14655598-14655617 | Msa0719400:intron | 30.0% |
| ! | TAAACTCACTGACTAATCAA+AGG | - | chr5_1:14655671-14655690 | Msa0719400:intron | 30.0% |
| ! | AAACTCACTGACTAATCAAA+GGG | - | chr5_1:14655672-14655691 | Msa0719400:intron | 30.0% |
| TAATATACACATTGGTCCTA+GGG | + | chr5_1:14655918-14655937 | None:intergenic | 30.0% | |
| ATAATATACACATTGGTCCT+AGG | + | chr5_1:14655919-14655938 | None:intergenic | 30.0% | |
| ATTTAAAGATCTTCAGCCAT+TGG | + | chr5_1:14655997-14656016 | None:intergenic | 30.0% | |
| GTGTGATTGTTTGATATGTT+TGG | - | chr5_1:14656072-14656091 | Msa0719400:intron | 30.0% | |
| ATTGTGGAATTCTTACAGAA+TGG | - | chr5_1:14656464-14656483 | Msa0719400:intron | 30.0% | |
| ! | ATTACATTTGAAGTATCCAG+AGG | + | chr5_1:14656572-14656591 | None:intergenic | 30.0% |
| ! | TGTAATGTCATTTATCATGC+AGG | - | chr5_1:14656586-14656605 | Msa0719400:intron | 30.0% |
| ! | GTAATGTCATTTATCATGCA+GGG | - | chr5_1:14656587-14656606 | Msa0719400:intron | 30.0% |
| TGATTTAAAAAGGAGAGAGA+AGG | - | chr5_1:14656723-14656742 | Msa0719400:intron | 30.0% | |
| AAGCAAAAACTTGTATATGC+AGG | + | chr5_1:14656862-14656881 | None:intergenic | 30.0% | |
| ACTCTTTCAAATGCATATGT+AGG | - | chr5_1:14656927-14656946 | Msa0719400:intron | 30.0% | |
| TGAAAAGACCATTGAAAATC+TGG | + | chr5_1:14657009-14657028 | None:intergenic | 30.0% | |
| CAATATCATGGTGAATGATT+GGG | + | chr5_1:14657138-14657157 | None:intergenic | 30.0% | |
| !! | ATTATAGCTATTGGCTCTAA+TGG | - | chr5_1:14657368-14657387 | Msa0719400:intron | 30.0% |
| ! | AACATCTACTCTAGAAATCT+TGG | - | chr5_1:14657489-14657508 | Msa0719400:intron | 30.0% |
| CCTGCAAATGATATCAAAAT+AGG | + | chr5_1:14657575-14657594 | None:intergenic | 30.0% | |
| !!! | CCTATTTTGATATCATTTGC+AGG | - | chr5_1:14657572-14657591 | Msa0719400:CDS | 30.0% |
| AAGTGCTAGTGAATATACAA+AGG | + | chr5_1:14657859-14657878 | None:intergenic | 30.0% | |
| TCATTTGCCTGTAACTAAAA+GGG | + | chr5_1:14657931-14657950 | None:intergenic | 30.0% | |
| ATCATTTGCCTGTAACTAAA+AGG | + | chr5_1:14657932-14657951 | None:intergenic | 30.0% | |
| !! | TTGGTTTTTCATGTTCTACT+TGG | - | chr5_1:14658051-14658070 | Msa0719400:intron | 30.0% |
| ! | TTTTGATCTCTTTATCTGCT+TGG | - | chr5_1:14658267-14658286 | Msa0719400:CDS | 30.0% |
| !! | TGTTGATAGGAAATTTTGCA+GGG | - | chr5_1:14658467-14658486 | Msa0719400:intron | 30.0% |
| CTTATGCTAAAACAAGTAAG+AGG | + | chr5_1:14658787-14658806 | None:intergenic | 30.0% | |
| TCAGCAATGAAACAATATAG+TGG | - | chr5_1:14658807-14658826 | Msa0719400:intron | 30.0% | |
| CAGCAATGAAACAATATAGT+GGG | - | chr5_1:14658808-14658827 | Msa0719400:intron | 30.0% | |
| !!! | AGACCAAAATGTTTTGAAAG+GGG | + | chr5_1:14658905-14658924 | None:intergenic | 30.0% |
| AAAGAGATAACAGCACAAAA+TGG | + | chr5_1:14658948-14658967 | None:intergenic | 30.0% | |
| ACGAGCATGACTTAAAAAAA+GGG | + | chr5_1:14658975-14658994 | None:intergenic | 30.0% | |
| TACGAGCATGACTTAAAAAA+AGG | + | chr5_1:14658976-14658995 | None:intergenic | 30.0% | |
| ! | GTTTGTTGAATATATTGCAC+TGG | - | chr5_1:14659147-14659166 | Msa0719400:intron | 30.0% |
| ACATCAGATCATAATTCCAT+AGG | + | chr5_1:14659551-14659570 | None:intergenic | 30.0% | |
| AGGTTCTACATTCAGTTATT+TGG | + | chr5_1:14659671-14659690 | None:intergenic | 30.0% | |
| ! | GATGTAAATTTTGTGGGAAT+TGG | - | chr5_1:14659707-14659726 | Msa0719400:intron | 30.0% |
| ! | AATTTTGTGGGAATTGGATA+TGG | - | chr5_1:14659713-14659732 | Msa0719400:intron | 30.0% |
| ATTCAAAATGAAAAGTAGGG+AGG | + | chr5_1:14659883-14659902 | None:intergenic | 30.0% | |
| CAAAACATCAATAGAAAACG+AGG | + | chr5_1:14660174-14660193 | None:intergenic | 30.0% | |
| GTTATAGAACTATAGACAAC+AGG | - | chr5_1:14660213-14660232 | Msa0719400:intron | 30.0% | |
| TGGTTCTTCATAGATACAAA+TGG | - | chr5_1:14660339-14660358 | Msa0719400:intron | 30.0% | |
| ! | TACAAATGGTTTCTTGCTAT+TGG | - | chr5_1:14660353-14660372 | Msa0719400:intron | 30.0% |
| !! | ACAAATGGTTTCTTGCTATT+GGG | - | chr5_1:14660354-14660373 | Msa0719400:intron | 30.0% |
| !!! | AAGGCTTTTTTTTGCTATTG+TGG | - | chr5_1:14660556-14660575 | Msa0719400:intron | 30.0% |
| GCAGAAGCAACAAAAATAAA+AGG | + | chr5_1:14660724-14660743 | None:intergenic | 30.0% | |
| ! | GAGAATATACATGTTTTTCC+GGG | - | chr5_1:14660745-14660764 | Msa0719400:intron | 30.0% |
| ! | AGAATATACATGTTTTTCCG+GGG | - | chr5_1:14660746-14660765 | Msa0719400:intron | 30.0% |
| !! | TTCTCAAGATTTTGTTGTAG+CGG | - | chr5_1:14660784-14660803 | Msa0719400:intron | 30.0% |
| GCATATATGTATTGGATTTC+CGG | - | chr5_1:14661024-14661043 | Msa0719400:five_prime_UTR | 30.0% | |
| !! | TTTTCTGCTTATTTGGAACG+CGG | + | chr5_1:14654323-14654342 | None:intergenic | 35.0% |
| AGTGATTCTCTCAACACATT+CGG | - | chr5_1:14654380-14654399 | Msa0719400:intron | 35.0% | |
| ! | GTGTTTTCGCACATTTTCTT+CGG | - | chr5_1:14654402-14654421 | Msa0719400:intron | 35.0% |
| TCTTCTTCTTCGAAAGGATT+GGG | + | chr5_1:14654461-14654480 | None:intergenic | 35.0% | |
| TTCTTCTTCTTCGAAAGGAT+TGG | + | chr5_1:14654462-14654481 | None:intergenic | 35.0% | |
| TTGACTTCTTCTTCTTCGAA+AGG | + | chr5_1:14654467-14654486 | None:intergenic | 35.0% | |
| TCCAACATTCTCTAGATTTG+CGG | - | chr5_1:14654607-14654626 | Msa0719400:intron | 35.0% | |
| ! | TTTAGTTTCGATGTTTGTGG+AGG | - | chr5_1:14654775-14654794 | Msa0719400:intron | 35.0% |
| ! | CTACTGTTTGATTTCACAGT+AGG | + | chr5_1:14655048-14655067 | None:intergenic | 35.0% |
| TGGTAGAAAATAGGCTTAGA+TGG | - | chr5_1:14655104-14655123 | Msa0719400:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | chr5_1:14655109-14655128 | Msa0719400:intron | 35.0% | |
| AGTCAAGTTAAAAGTGGTAG+AGG | - | chr5_1:14655190-14655209 | Msa0719400:intron | 35.0% | |
| !!! | GGTTTTAGAGGTTAATGAGT+TGG | - | chr5_1:14655249-14655268 | Msa0719400:intron | 35.0% |
| GTCAGTGAGTTTATAGTACA+GGG | + | chr5_1:14655664-14655683 | None:intergenic | 35.0% | |
| AGTCAGTGAGTTTATAGTAC+AGG | + | chr5_1:14655665-14655684 | None:intergenic | 35.0% | |
| TACTGCTATTATTGCTAGGT+AGG | + | chr5_1:14655703-14655722 | None:intergenic | 35.0% | |
| !! | AAACACAGTGTAGAGGTATT+GGG | - | chr5_1:14655802-14655821 | Msa0719400:intron | 35.0% |
| TATAAGTTTACACCCAGAAG+AGG | + | chr5_1:14655876-14655895 | None:intergenic | 35.0% | |
| AATATACACATTGGTCCTAG+GGG | + | chr5_1:14655917-14655936 | None:intergenic | 35.0% | |
| !!! | GGTAGTTTTTTTGGAAACCT+TGG | - | chr5_1:14656386-14656405 | Msa0719400:intron | 35.0% |
| GAATTCTTACAGAATGGTGT+TGG | - | chr5_1:14656470-14656489 | Msa0719400:intron | 35.0% | |
| !!! | TAGCTCTTGACCTTTTTTCT+TGG | + | chr5_1:14656689-14656708 | None:intergenic | 35.0% |
| TTAAAAAGGAGAGAGAAGGT+TGG | - | chr5_1:14656727-14656746 | Msa0719400:intron | 35.0% | |
| GTCAAAATCCTCAAAAGCAA+AGG | + | chr5_1:14656909-14656928 | None:intergenic | 35.0% | |
| AGAGAAGATTCTGTTGCTAA+AGG | - | chr5_1:14656961-14656980 | Msa0719400:intron | 35.0% | |
| TTCGAAATATGCTTATCAGC+TGG | - | chr5_1:14657076-14657095 | Msa0719400:intron | 35.0% | |
| AGGCCAATTCTTATCATCAA+CGG | + | chr5_1:14657107-14657126 | None:intergenic | 35.0% | |
| TGAATGATTGGGAAAAATGG+AGG | + | chr5_1:14657127-14657146 | None:intergenic | 35.0% | |
| TGGTGAATGATTGGGAAAAA+TGG | + | chr5_1:14657130-14657149 | None:intergenic | 35.0% | |
| GCAATATCATGGTGAATGAT+TGG | + | chr5_1:14657139-14657158 | None:intergenic | 35.0% | |
| GAATCTCATTGGCAATATCA+TGG | + | chr5_1:14657150-14657169 | None:intergenic | 35.0% | |
| ! | ACTTCTTACCAGCATTTTCT+TGG | - | chr5_1:14657286-14657305 | Msa0719400:intron | 35.0% |
| ! | TTTGCTTTGGTTTAACGACA+TGG | + | chr5_1:14657324-14657343 | None:intergenic | 35.0% |
| ATGTCGTTAAACCAAAGCAA+AGG | - | chr5_1:14657323-14657342 | Msa0719400:intron | 35.0% | |
| TGTCGTTAAACCAAAGCAAA+GGG | - | chr5_1:14657324-14657343 | Msa0719400:intron | 35.0% | |
| TTTCCCGTGATTATAGCTAT+TGG | - | chr5_1:14657359-14657378 | Msa0719400:CDS | 35.0% | |
| AGAGCCAATAGCTATAATCA+CGG | + | chr5_1:14657366-14657385 | None:intergenic | 35.0% | |
| GAGTAGATGTTTGTGTTTGA+GGG | + | chr5_1:14657480-14657499 | None:intergenic | 35.0% | |
| AGAGTAGATGTTTGTGTTTG+AGG | + | chr5_1:14657481-14657500 | None:intergenic | 35.0% | |
| ACAACACGAAACTAGAGAAT+TGG | + | chr5_1:14657691-14657710 | None:intergenic | 35.0% | |
| ! | AATTCTCTAGTTTCGTGTTG+TGG | - | chr5_1:14657690-14657709 | Msa0719400:intron | 35.0% |
| ACATTGTAAACTTCACAGTG+AGG | + | chr5_1:14657723-14657742 | None:intergenic | 35.0% | |
| TACCAAAGCACATATGAAAG+GGG | + | chr5_1:14657797-14657816 | None:intergenic | 35.0% | |
| GTACCAAAGCACATATGAAA+GGG | + | chr5_1:14657798-14657817 | None:intergenic | 35.0% | |
| TGTACCAAAGCACATATGAA+AGG | + | chr5_1:14657799-14657818 | None:intergenic | 35.0% | |
| TTTCATATGTGCTTTGGTAC+AGG | - | chr5_1:14657798-14657817 | Msa0719400:intron | 35.0% | |
| TCATAATGCACAATCAGGTT+AGG | + | chr5_1:14657974-14657993 | None:intergenic | 35.0% | |
| AACCTGATTGTGCATTATGA+TGG | - | chr5_1:14657974-14657993 | Msa0719400:intron | 35.0% | |
| AACCATCATAATGCACAATC+AGG | + | chr5_1:14657979-14657998 | None:intergenic | 35.0% | |
| ! | TATGATTGTTTCTCTTCTGC+AGG | - | chr5_1:14658005-14658024 | Msa0719400:intron | 35.0% |
| TTTCCATGAAAAACAACTGG+AGG | + | chr5_1:14658197-14658216 | None:intergenic | 35.0% | |
| GACTTTCCATGAAAAACAAC+TGG | + | chr5_1:14658200-14658219 | None:intergenic | 35.0% | |
| ! | GTGGGACATTTTAAATGACA+TGG | + | chr5_1:14658391-14658410 | None:intergenic | 35.0% |
| GTAAACTCGTGTTTGACTAA+TGG | + | chr5_1:14658422-14658441 | None:intergenic | 35.0% | |
| AGGGAACTAAAACTGTTGAT+AGG | - | chr5_1:14658454-14658473 | Msa0719400:intron | 35.0% | |
| !! | CTGTTGATAGGAAATTTTGC+AGG | - | chr5_1:14658466-14658485 | Msa0719400:intron | 35.0% |
| AATTCAATGTAACCATGCGT+CGG | - | chr5_1:14658684-14658703 | Msa0719400:CDS | 35.0% | |
| ACATGATATGTATCTGACAC+CGG | - | chr5_1:14658713-14658732 | Msa0719400:intron | 35.0% | |
| ! | TTTGTCATTCGTTTGAGTTC+AGG | - | chr5_1:14658855-14658874 | Msa0719400:CDS | 35.0% |
| ! | GTTCCCCTTTCAAAACATTT+TGG | - | chr5_1:14658899-14658918 | Msa0719400:CDS | 35.0% |
| GGTCTTTCTCATATTGTAGT+TGG | - | chr5_1:14658920-14658939 | Msa0719400:intron | 35.0% | |
| AGCATGACTTAAAAAAAGGG+TGG | + | chr5_1:14658972-14658991 | None:intergenic | 35.0% | |
| AGATCATAATTCCATAGGAG+AGG | + | chr5_1:14659546-14659565 | None:intergenic | 35.0% | |
| GTTAAGAGCCAATAACTACA+TGG | + | chr5_1:14659623-14659642 | None:intergenic | 35.0% | |
| GGATATGGAACTAGATTTAG+TGG | - | chr5_1:14659728-14659747 | Msa0719400:intron | 35.0% | |
| AAAAATGCATCCATGTTCAC+TGG | + | chr5_1:14659815-14659834 | None:intergenic | 35.0% | |
| AGCATGTAAGCACAGTTAAA+AGG | + | chr5_1:14659946-14659965 | None:intergenic | 35.0% | |
| AACACACTTCAGTCTTCAAA+AGG | + | chr5_1:14660298-14660317 | None:intergenic | 35.0% | |
| TTGTATCTATGAAGAACCAC+TGG | + | chr5_1:14660338-14660357 | None:intergenic | 35.0% | |
| !! | CAAATGGTTTCTTGCTATTG+GGG | - | chr5_1:14660355-14660374 | Msa0719400:intron | 35.0% |
| !! | AAATGGTTTCTTGCTATTGG+GGG | - | chr5_1:14660356-14660375 | Msa0719400:intron | 35.0% |
| !!! | TTTTTTGCTATTGTGGACTC+TGG | - | chr5_1:14660563-14660582 | Msa0719400:intron | 35.0% |
| !!! | TTTTTGCTATTGTGGACTCT+GGG | - | chr5_1:14660564-14660583 | Msa0719400:intron | 35.0% |
| AGTGAAAAACACAGAAGTCA+TGG | + | chr5_1:14660636-14660655 | None:intergenic | 35.0% | |
| ! | GAATATACATGTTTTTCCGG+GGG | - | chr5_1:14660747-14660766 | Msa0719400:intron | 35.0% |
| TATTGCAAAGAATGGAGAAG+AGG | + | chr5_1:14660867-14660886 | None:intergenic | 35.0% | |
| CACGAAGATATTGCAAAGAA+TGG | + | chr5_1:14660875-14660894 | None:intergenic | 35.0% | |
| TTCTTTGCAATATCTTCGTG+TGG | - | chr5_1:14660875-14660894 | Msa0719400:intron | 35.0% | |
| ! | TTTCTGCTTATTTGGAACGC+GGG | + | chr5_1:14654322-14654341 | None:intergenic | 40.0% |
| ACCGCAAATCTAGAGAATGT+TGG | + | chr5_1:14654611-14654630 | None:intergenic | 40.0% | |
| ACTTGGATCTGGAGAAATGT+AGG | - | chr5_1:14654798-14654817 | Msa0719400:intron | 40.0% | |
| ! | TGTTTGATTTCACAGTAGGG+AGG | + | chr5_1:14655044-14655063 | None:intergenic | 40.0% |
| CAAACAGTAGCAAAGTAGAG+TGG | - | chr5_1:14655058-14655077 | Msa0719400:intron | 40.0% | |
| ! | TTGATCGACTCTTCTTACGA+CGG | + | chr5_1:14655161-14655180 | None:intergenic | 40.0% |
| CGTAAGAAGAGTCGATCAAA+CGG | - | chr5_1:14655162-14655181 | Msa0719400:intron | 40.0% | |
| GAGGAGAGTCAAGTTAAAAG+TGG | - | chr5_1:14655184-14655203 | Msa0719400:intron | 40.0% | |
| GCTCTGTCATGAACCAAATT+TGG | + | chr5_1:14655277-14655296 | None:intergenic | 40.0% | |
| ! | TGGTTCATGACAGAGCATTA+TGG | - | chr5_1:14655281-14655300 | Msa0719400:intron | 40.0% |
| TGACATTATTAGGCACAGAG+AGG | - | chr5_1:14655519-14655538 | Msa0719400:intron | 40.0% | |
| TATTAGGCACAGAGAGGTTT+AGG | - | chr5_1:14655525-14655544 | Msa0719400:intron | 40.0% | |
| ! | AGCAGATGAAGTTTTTCTCG+TGG | - | chr5_1:14655751-14655770 | Msa0719400:intron | 40.0% |
| ! | CAAACACAGTGTAGAGGTAT+TGG | - | chr5_1:14655801-14655820 | Msa0719400:intron | 40.0% |
| !! | CAAAAAGGCATCAAATGCCA+AGG | + | chr5_1:14656406-14656425 | None:intergenic | 40.0% |
| ! | CGTGGGAAGCTGATTTAAAA+AGG | - | chr5_1:14656713-14656732 | Msa0719400:intron | 40.0% |
| GCAGGCATTTAAGAGAATAC+AGG | + | chr5_1:14656844-14656863 | None:intergenic | 40.0% | |
| TTCTGCCACTATTAGTCAAC+TGG | - | chr5_1:14656880-14656899 | Msa0719400:intron | 40.0% | |
| GGATACCAGTTGACTAATAG+TGG | + | chr5_1:14656888-14656907 | None:intergenic | 40.0% | |
| !! | ACTGGTATCCTTTGCTTTTG+AGG | - | chr5_1:14656898-14656917 | Msa0719400:intron | 40.0% |
| CATTGAAAATCTGGCATGGA+GGG | + | chr5_1:14657000-14657019 | None:intergenic | 40.0% | |
| AGACCATTGAAAATCTGGCA+TGG | + | chr5_1:14657004-14657023 | None:intergenic | 40.0% | |
| !! | TGCCCGTTGATGATAAGAAT+TGG | - | chr5_1:14657101-14657120 | Msa0719400:intron | 40.0% |
| GGCCAATTCTTATCATCAAC+GGG | + | chr5_1:14657106-14657125 | None:intergenic | 40.0% | |
| AGCATGAACTGGAATCTCAT+TGG | + | chr5_1:14657161-14657180 | None:intergenic | 40.0% | |
| TGCTCAGAGACTGCAATATT+CGG | - | chr5_1:14657177-14657196 | Msa0719400:intron | 40.0% | |
| AATATTCGGCCTTTGCTAGT+TGG | - | chr5_1:14657191-14657210 | Msa0719400:CDS | 40.0% | |
| GCTACTTACCAAGAAAATGC+TGG | + | chr5_1:14657297-14657316 | None:intergenic | 40.0% | |
| AAAATGCATGCCCTTTGCTT+TGG | + | chr5_1:14657337-14657356 | None:intergenic | 40.0% | |
| GAGCCAATAGCTATAATCAC+GGG | + | chr5_1:14657365-14657384 | None:intergenic | 40.0% | |
| !! | ATAGCTATTGGCTCTAATGG+TGG | - | chr5_1:14657371-14657390 | Msa0719400:intron | 40.0% |
| !! | TAGCTATTGGCTCTAATGGT+GGG | - | chr5_1:14657372-14657391 | Msa0719400:intron | 40.0% |
| TGATATAAATGCCTGCCCAA+TGG | + | chr5_1:14657440-14657459 | None:intergenic | 40.0% | |
| TAGTTGCAGTGATTGTCTGT+TGG | - | chr5_1:14657621-14657640 | Msa0719400:intron | 40.0% | |
| CTGTGAAGTTTACAATGTGC+AGG | - | chr5_1:14657725-14657744 | Msa0719400:intron | 40.0% | |
| TTCCCCTTTCATATGTGCTT+TGG | - | chr5_1:14657792-14657811 | Msa0719400:CDS | 40.0% | |
| TTACCTCATAGCACGATAGA+GGG | + | chr5_1:14657825-14657844 | None:intergenic | 40.0% | |
| TTTACCTCATAGCACGATAG+AGG | + | chr5_1:14657826-14657845 | None:intergenic | 40.0% | |
| ACTGTAAACACATAGGGCTT+AGG | - | chr5_1:14657892-14657911 | Msa0719400:intron | 40.0% | |
| ATAGGGCTTAGGACTACTTA+GGG | - | chr5_1:14657903-14657922 | Msa0719400:intron | 40.0% | |
| !! | TAGGGATCCCTTTTAGTTAC+AGG | - | chr5_1:14657921-14657940 | Msa0719400:intron | 40.0% |
| AATGCACAATCAGGTTAGGA+GGG | + | chr5_1:14657970-14657989 | None:intergenic | 40.0% | |
| TAATGCACAATCAGGTTAGG+AGG | + | chr5_1:14657971-14657990 | None:intergenic | 40.0% | |
| ATAGTGCACTGAAGTTCAGT+TGG | - | chr5_1:14658032-14658051 | Msa0719400:intron | 40.0% | |
| AAGTCGGTCACTAAGTAACA+TGG | + | chr5_1:14658102-14658121 | None:intergenic | 40.0% | |
| !! | AGTTCTACAAGCTGTTTTGC+AGG | - | chr5_1:14658229-14658248 | Msa0719400:CDS | 40.0% |
| !! | GTTCTACAAGCTGTTTTGCA+GGG | - | chr5_1:14658230-14658249 | Msa0719400:CDS | 40.0% |
| ! | GTCATTTAAAATGTCCCACG+TGG | - | chr5_1:14658392-14658411 | Msa0719400:intron | 40.0% |
| TATGAAGCACAGATACTCCT+AGG | + | chr5_1:14658750-14658769 | None:intergenic | 40.0% | |
| !! | TAGGAGTATCTGTGCTTCAT+AGG | - | chr5_1:14658749-14658768 | Msa0719400:intron | 40.0% |
| ACACAATCAAACAGACCCTT+AGG | + | chr5_1:14659290-14659309 | None:intergenic | 40.0% | |
| GGGTCTGTTTGATTGTGTTT+AGG | - | chr5_1:14659292-14659311 | Msa0719400:intron | 40.0% | |
| ACTAATTGCCTTCGAGACTT+GGG | + | chr5_1:14659498-14659517 | None:intergenic | 40.0% | |
| AGTGGTGTCTAGCTACTATA+AGG | - | chr5_1:14659746-14659765 | Msa0719400:intron | 40.0% | |
| !! | TGGATTTGGTCTGTTTTGCT+TGG | - | chr5_1:14660012-14660031 | Msa0719400:intron | 40.0% |
| ! | ATTTGGTCTGTTTTGCTTGG+AGG | - | chr5_1:14660015-14660034 | Msa0719400:intron | 40.0% |
| TCTAAGCTTGTGGGTAATTC+AGG | - | chr5_1:14660042-14660061 | Msa0719400:intron | 40.0% | |
| AGGGCAAGAGTAAATTAGAC+CGG | - | chr5_1:14660251-14660270 | Msa0719400:intron | 40.0% | |
| AACAGTGAATGATTCACCAG+TGG | - | chr5_1:14660319-14660338 | Msa0719400:intron | 40.0% | |
| !! | AATGGTTTCTTGCTATTGGG+GGG | - | chr5_1:14660357-14660376 | Msa0719400:intron | 40.0% |
| AGCTCACTTGGTTGAGTTTA+AGG | - | chr5_1:14660386-14660405 | Msa0719400:intron | 40.0% | |
| GGGAAACTCAAGACTATGTT+TGG | - | chr5_1:14660584-14660603 | Msa0719400:intron | 40.0% | |
| AAGAAACTTGCAAGTGTAGC+TGG | + | chr5_1:14660662-14660681 | None:intergenic | 40.0% | |
| CTGTCAAGTACAGACAACTA+TGG | + | chr5_1:14660933-14660952 | None:intergenic | 40.0% | |
| TATGTATTGGATTTCCGGTG+TGG | - | chr5_1:14661029-14661048 | Msa0719400:five_prime_UTR | 40.0% | |
| CATCTACACTATATCCACAC+CGG | + | chr5_1:14661046-14661065 | None:intergenic | 40.0% | |
| ! | CTTATTTGGAACGCGGGATT+TGG | + | chr5_1:14654316-14654335 | None:intergenic | 45.0% |
| ! | TCAGAGTGTGATAGTGCATG+CGG | + | chr5_1:14654360-14654379 | None:intergenic | 45.0% |
| ! | TTTGAGATTGCGAATCGGTG+TGG | - | chr5_1:14654750-14654769 | Msa0719400:intron | 45.0% |
| TTCGATGTTTGTGGAGGACT+TGG | - | chr5_1:14654781-14654800 | Msa0719400:intron | 45.0% | |
| AAGAAGAGTCGATCAAACGG+AGG | - | chr5_1:14655165-14655184 | Msa0719400:intron | 45.0% | |
| AAAGTGGTAGAGGAAGACCT+AGG | - | chr5_1:14655200-14655219 | Msa0719400:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr5_1:14655330-14655349 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr5_1:14655331-14655350 | None:intergenic | 45.0% |
| CTAGGACAAACACAGTGTAG+AGG | - | chr5_1:14655795-14655814 | Msa0719400:intron | 45.0% | |
| !! | AGAGGTATTGGGTATGCTGA+AGG | - | chr5_1:14655813-14655832 | Msa0719400:intron | 45.0% |
| AAATTGTAGGCGCCTCTTCT+GGG | - | chr5_1:14655861-14655880 | Msa0719400:intron | 45.0% | |
| ATACCTTCTGTGAAACCCCT+AGG | - | chr5_1:14655899-14655918 | Msa0719400:intron | 45.0% | |
| AAAATCACGTGTTCCACCGT+TGG | - | chr5_1:14656496-14656515 | Msa0719400:intron | 45.0% | |
| TAGGGGGACTCCAAGAAAAA+AGG | - | chr5_1:14656676-14656695 | Msa0719400:intron | 45.0% | |
| CCATTGAAAATCTGGCATGG+AGG | + | chr5_1:14657001-14657020 | None:intergenic | 45.0% | |
| ! | CCTCCATGCCAGATTTTCAA+TGG | - | chr5_1:14656998-14657017 | Msa0719400:intron | 45.0% |
| CATACCCAACCAACTAGCAA+AGG | + | chr5_1:14657203-14657222 | None:intergenic | 45.0% | |
| CTTTGCTAGTTGGTTGGGTA+TGG | - | chr5_1:14657201-14657220 | Msa0719400:CDS | 45.0% | |
| TTGGCAAGACTCGTTCCATT+GGG | - | chr5_1:14657422-14657441 | Msa0719400:intron | 45.0% | |
| GTGATTGTCTGTTGGATCAG+AGG | - | chr5_1:14657629-14657648 | Msa0719400:intron | 45.0% | |
| ATTGTCTGTTGGATCAGAGG+CGG | - | chr5_1:14657632-14657651 | Msa0719400:intron | 45.0% | |
| ! | TCTAGTTTCGTGTTGTGGCT+TGG | - | chr5_1:14657695-14657714 | Msa0719400:intron | 45.0% |
| CTAGTTTCGTGTTGTGGCTT+GGG | - | chr5_1:14657696-14657715 | Msa0719400:intron | 45.0% | |
| CAGTGATTTATGCGCTGCTT+GGG | - | chr5_1:14657768-14657787 | Msa0719400:CDS | 45.0% | |
| TACCTCATAGCACGATAGAG+GGG | + | chr5_1:14657824-14657843 | None:intergenic | 45.0% | |
| CATAGGGCTTAGGACTACTT+AGG | - | chr5_1:14657902-14657921 | Msa0719400:intron | 45.0% | |
| !!! | GCACCTCCAGTTGTTTTTCA+TGG | - | chr5_1:14658191-14658210 | Msa0719400:intron | 45.0% |
| TGACTAATGGAAGTCCACGT+GGG | + | chr5_1:14658409-14658428 | None:intergenic | 45.0% | |
| TTGACTAATGGAAGTCCACG+TGG | + | chr5_1:14658410-14658429 | None:intergenic | 45.0% | |
| GTTTATGTCTGTGTCGTGTC+TGG | + | chr5_1:14658629-14658648 | None:intergenic | 45.0% | |
| GCACAGATACTCCTAGGATT+AGG | + | chr5_1:14658744-14658763 | None:intergenic | 45.0% | |
| ! | GTCATTCGTTTGAGTTCAGG+TGG | - | chr5_1:14658858-14658877 | Msa0719400:CDS | 45.0% |
| ! | ATTCGTTTGAGTTCAGGTGG+TGG | - | chr5_1:14658861-14658880 | Msa0719400:CDS | 45.0% |
| ! | TTCGTTTGAGTTCAGGTGGT+GGG | - | chr5_1:14658862-14658881 | Msa0719400:CDS | 45.0% |
| AGAACACATCAATCGCTGCA+AGG | + | chr5_1:14659073-14659092 | None:intergenic | 45.0% | |
| TGTGTTCTCAGACCACGTAT+TGG | - | chr5_1:14659085-14659104 | Msa0719400:intron | 45.0% | |
| ! | TTCTCAGACCACGTATTGGT+TGG | - | chr5_1:14659089-14659108 | Msa0719400:intron | 45.0% |
| !! | TCTCAGACCACGTATTGGTT+GGG | - | chr5_1:14659090-14659109 | Msa0719400:intron | 45.0% |
| AACTTACCCCAACCAATACG+TGG | + | chr5_1:14659100-14659119 | None:intergenic | 45.0% | |
| CTAATTGCCTTCGAGACTTG+GGG | + | chr5_1:14659497-14659516 | None:intergenic | 45.0% | |
| CACTAATTGCCTTCGAGACT+TGG | + | chr5_1:14659499-14659518 | None:intergenic | 45.0% | |
| TTCCATAGGAGAGGAGAAAG+AGG | + | chr5_1:14659537-14659556 | None:intergenic | 45.0% | |
| ! | TGTTCACTGGTTGCACTTGA+GGG | + | chr5_1:14659802-14659821 | None:intergenic | 45.0% |
| ! | ATGTTCACTGGTTGCACTTG+AGG | + | chr5_1:14659803-14659822 | None:intergenic | 45.0% |
| TCAAGTGCAACCAGTGAACA+TGG | - | chr5_1:14659802-14659821 | Msa0719400:intron | 45.0% | |
| CTTGTGGGTAATTCAGGTGA+GGG | - | chr5_1:14660048-14660067 | Msa0719400:intron | 45.0% | |
| ! | ACAGGGAGTTGCTTTAGATG+AGG | - | chr5_1:14660231-14660250 | Msa0719400:intron | 45.0% |
| ! | CAGGGAGTTGCTTTAGATGA+GGG | - | chr5_1:14660232-14660251 | Msa0719400:intron | 45.0% |
| TGCCTAAACTCTTACAAGGC+CGG | + | chr5_1:14660273-14660292 | None:intergenic | 45.0% | |
| ! | GGAGTGCCTAAACTCTTACA+AGG | + | chr5_1:14660277-14660296 | None:intergenic | 45.0% |
| !! | TTTCTTGCTATTGGGGGGAT+GGG | - | chr5_1:14660362-14660381 | Msa0719400:intron | 45.0% |
| GAGAATATACTAGGCCACAC+TGG | + | chr5_1:14660832-14660851 | None:intergenic | 45.0% | |
| !!! | TATCTATTTATTAATTATTT+TGG | - | chr5_1:14657238-14657257 | Msa0719400:intron | 5.0% |
| !! | TAAATGTATTAAAAAAAATT+GGG | + | chr5_1:14658336-14658355 | None:intergenic | 5.0% |
| !! | TTAAATGTATTAAAAAAAAT+TGG | + | chr5_1:14658337-14658356 | None:intergenic | 5.0% |
| !!! | AATGAATTTTTAAATTTTAT+AGG | - | chr5_1:14658522-14658541 | Msa0719400:intron | 5.0% |
| !!! | ATGAATTTTTAAATTTTATA+GGG | - | chr5_1:14658523-14658542 | Msa0719400:intron | 5.0% |
| CTTCGAAAGGATTGGGATCG+TGG | + | chr5_1:14654454-14654473 | None:intergenic | 50.0% | |
| GTTTGTGGAGGACTTGGATC+TGG | - | chr5_1:14654787-14654806 | Msa0719400:intron | 50.0% | |
| TTTGTGTTCACGCAACGCAG+TGG | - | chr5_1:14654845-14654864 | Msa0719400:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr5_1:14655326-14655345 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr5_1:14655332-14655351 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr5_1:14655329-14655348 | Msa0719400:intron | 50.0% | |
| GAAATTGTAGGCGCCTCTTC+TGG | - | chr5_1:14655860-14655879 | Msa0719400:intron | 50.0% | |
| TTGACCAAAGCCAGCTGGTT+CGG | + | chr5_1:14656525-14656544 | None:intergenic | 50.0% | |
| TGTCTTTGACCAAAGCCAGC+TGG | + | chr5_1:14656530-14656549 | None:intergenic | 50.0% | |
| TGCGACAGTTGACATTCCTC+TGG | - | chr5_1:14656553-14656572 | Msa0719400:intron | 50.0% | |
| TGCAGTCTCTGAGCATGAAC+TGG | + | chr5_1:14657172-14657191 | None:intergenic | 50.0% | |
| TTCGGCCTTTGCTAGTTGGT+TGG | - | chr5_1:14657195-14657214 | Msa0719400:CDS | 50.0% | |
| TCGGCCTTTGCTAGTTGGTT+GGG | - | chr5_1:14657196-14657215 | Msa0719400:CDS | 50.0% | |
| !! | GGCTCTAATGGTGGGTGAAA+TGG | - | chr5_1:14657380-14657399 | Msa0719400:intron | 50.0% |
| CTTGGCAAGACTCGTTCCAT+TGG | - | chr5_1:14657421-14657440 | Msa0719400:intron | 50.0% | |
| GCAGCGCATAAATCACTGCA+AGG | + | chr5_1:14657766-14657785 | None:intergenic | 50.0% | |
| GCAGTGATTTATGCGCTGCT+TGG | - | chr5_1:14657767-14657786 | Msa0719400:CDS | 50.0% | |
| ! | ATGTAACCATGCGTCGGTGT+CGG | - | chr5_1:14658690-14658709 | Msa0719400:CDS | 50.0% |
| !! | CTCAGACCACGTATTGGTTG+GGG | - | chr5_1:14659091-14659110 | Msa0719400:intron | 50.0% |
| AAACAAGCCCCAAGTCTCGA+AGG | - | chr5_1:14659487-14659506 | Msa0719400:intron | 50.0% | |
| CACCTCTTTCTCCTCTCCTA+TGG | - | chr5_1:14659532-14659551 | Msa0719400:intron | 50.0% | |
| TGGAGGCTCTTCTAAGCTTG+TGG | - | chr5_1:14660032-14660051 | Msa0719400:intron | 50.0% | |
| GGAGGCTCTTCTAAGCTTGT+GGG | - | chr5_1:14660033-14660052 | Msa0719400:intron | 50.0% | |
| GCTTGTGGGTAATTCAGGTG+AGG | - | chr5_1:14660047-14660066 | Msa0719400:intron | 50.0% | |
| ! | GACCGGCCTTGTAAGAGTTT+AGG | - | chr5_1:14660268-14660287 | Msa0719400:intron | 50.0% |
| !! | GTTTCTTGCTATTGGGGGGA+TGG | - | chr5_1:14660361-14660380 | Msa0719400:intron | 50.0% |
| AATAGTCTCACTTGTGCCCC+CGG | + | chr5_1:14660766-14660785 | None:intergenic | 50.0% | |
| GTGTCAGTCACTATCCAGTG+TGG | - | chr5_1:14660815-14660834 | Msa0719400:intron | 50.0% | |
| GGGATCGTGGTTGCGATTCA+TGG | + | chr5_1:14654441-14654460 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr5_1:14655318-14655337 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr5_1:14655317-14655336 | Msa0719400:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr5_1:14655318-14655337 | Msa0719400:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr5_1:14655324-14655343 | Msa0719400:intron | 55.0% | |
| GGTCCTAGGGGTTTCACAGA+AGG | + | chr5_1:14655905-14655924 | None:intergenic | 55.0% | |
| AAGGTCAAGAGCTAGCAGCG+TGG | - | chr5_1:14656695-14656714 | Msa0719400:intron | 55.0% | |
| AGGTCAAGAGCTAGCAGCGT+GGG | - | chr5_1:14656696-14656715 | Msa0719400:intron | 55.0% | |
| CAAGACTCGTTCCATTGGGC+AGG | - | chr5_1:14657426-14657445 | Msa0719400:intron | 55.0% | |
| CTCCTAGGATTAGGCGTGTC+CGG | + | chr5_1:14658735-14658754 | None:intergenic | 55.0% | |
| !! | CCAGCTGGTTCGGATGCCAA+CGG | + | chr5_1:14656515-14656534 | None:intergenic | 60.0% |
| ! | GCATCCGAACCAGCTGGCTT+TGG | - | chr5_1:14656518-14656537 | Msa0719400:intron | 60.0% |
| GTCTGTTGGATCAGAGGCGG+CGG | - | chr5_1:14657635-14657654 | Msa0719400:intron | 60.0% | |
| GGCCCCTCTATCGTGCTATG+AGG | - | chr5_1:14657819-14657838 | Msa0719400:intron | 60.0% | |
| TCATGTCCGACACCGACGCA+TGG | + | chr5_1:14658699-14658718 | None:intergenic | 60.0% | |
| CACCGGACACGCCTAATCCT+AGG | - | chr5_1:14658730-14658749 | Msa0719400:intron | 60.0% | |
| !! | GCTGGTTCGGATGCCAACGG+TGG | + | chr5_1:14656512-14656531 | None:intergenic | 65.0% |
| CCGTTGGCATCCGAACCAGC+TGG | - | chr5_1:14656512-14656531 | Msa0719400:intron | 65.0% | |
| GGGGGGATGGGTAGCTCACT+TGG | - | chr5_1:14660374-14660393 | Msa0719400:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 14654300 | 14661110 | 14654300 | ID=Msa0719400;Name=Msa0719400 |
| chr5_1 | mRNA | 14654300 | 14661110 | 14654300 | ID=Msa0719400-mRNA-1;Parent=Msa0719400;Name=Msa0719400-mRNA-1;_AED=0.29;_eAED=0.29;_QI=140|0.81|0.83|0.91|0.81|0.91|12|0|252 |
| chr5_1 | exon | 14654300 | 14654311 | 14654300 | ID=Msa0719400-mRNA-1:exon:5702;Parent=Msa0719400-mRNA-1 |
| chr5_1 | exon | 14655347 | 14655412 | 14655347 | ID=Msa0719400-mRNA-1:exon:5701;Parent=Msa0719400-mRNA-1 |
| chr5_1 | exon | 14656298 | 14656346 | 14656298 | ID=Msa0719400-mRNA-1:exon:5700;Parent=Msa0719400-mRNA-1 |
| chr5_1 | exon | 14657185 | 14657252 | 14657185 | ID=Msa0719400-mRNA-1:exon:5699;Parent=Msa0719400-mRNA-1 |
| chr5_1 | exon | 14657338 | 14657383 | 14657338 | ID=Msa0719400-mRNA-1:exon:5698;Parent=Msa0719400-mRNA-1 |
| chr5_1 | exon | 14657570 | 14657639 | 14657570 | ID=Msa0719400-mRNA-1:exon:5697;Parent=Msa0719400-mRNA-1 |
| chr5_1 | exon | 14657754 | 14657816 | 14657754 | ID=Msa0719400-mRNA-1:exon:5696;Parent=Msa0719400-mRNA-1 |
| chr5_1 | exon | 14658193 | 14658315 | 14658193 | ID=Msa0719400-mRNA-1:exon:5695;Parent=Msa0719400-mRNA-1 |
| chr5_1 | exon | 14658428 | 14658461 | 14658428 | ID=Msa0719400-mRNA-1:exon:5694;Parent=Msa0719400-mRNA-1 |
| chr5_1 | exon | 14658666 | 14658731 | 14658666 | ID=Msa0719400-mRNA-1:exon:5693;Parent=Msa0719400-mRNA-1 |
| chr5_1 | exon | 14658824 | 14658928 | 14658824 | ID=Msa0719400-mRNA-1:exon:5692;Parent=Msa0719400-mRNA-1 |
| chr5_1 | exon | 14660914 | 14661110 | 14660914 | ID=Msa0719400-mRNA-1:exon:5691;Parent=Msa0719400-mRNA-1 |
| chr5_1 | five_prime_UTR | 14660971 | 14661110 | 14660971 | ID=Msa0719400-mRNA-1:five_prime_utr;Parent=Msa0719400-mRNA-1 |
| chr5_1 | CDS | 14660914 | 14660970 | 14660914 | ID=Msa0719400-mRNA-1:cds;Parent=Msa0719400-mRNA-1 |
| chr5_1 | CDS | 14658824 | 14658928 | 14658824 | ID=Msa0719400-mRNA-1:cds;Parent=Msa0719400-mRNA-1 |
| chr5_1 | CDS | 14658666 | 14658731 | 14658666 | ID=Msa0719400-mRNA-1:cds;Parent=Msa0719400-mRNA-1 |
| chr5_1 | CDS | 14658428 | 14658461 | 14658428 | ID=Msa0719400-mRNA-1:cds;Parent=Msa0719400-mRNA-1 |
| chr5_1 | CDS | 14658193 | 14658315 | 14658193 | ID=Msa0719400-mRNA-1:cds;Parent=Msa0719400-mRNA-1 |
| chr5_1 | CDS | 14657754 | 14657816 | 14657754 | ID=Msa0719400-mRNA-1:cds;Parent=Msa0719400-mRNA-1 |
| chr5_1 | CDS | 14657570 | 14657639 | 14657570 | ID=Msa0719400-mRNA-1:cds;Parent=Msa0719400-mRNA-1 |
| chr5_1 | CDS | 14657338 | 14657383 | 14657338 | ID=Msa0719400-mRNA-1:cds;Parent=Msa0719400-mRNA-1 |
| chr5_1 | CDS | 14657185 | 14657252 | 14657185 | ID=Msa0719400-mRNA-1:cds;Parent=Msa0719400-mRNA-1 |
| chr5_1 | CDS | 14656298 | 14656346 | 14656298 | ID=Msa0719400-mRNA-1:cds;Parent=Msa0719400-mRNA-1 |
| chr5_1 | CDS | 14655347 | 14655412 | 14655347 | ID=Msa0719400-mRNA-1:cds;Parent=Msa0719400-mRNA-1 |
| chr5_1 | CDS | 14654300 | 14654311 | 14654300 | ID=Msa0719400-mRNA-1:cds;Parent=Msa0719400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
