AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0167480


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0167480 MtrunA17_Chr7g0261941 100.000 140 0 0 1 140 1 140 1.55e-99 281
Msa0167480 MtrunA17_Chr1g0183341 100.000 140 0 0 1 140 1 140 1.55e-99 281
Msa0167480 MtrunA17_Chr1g0157171 81.818 121 8 1 16 136 1 107 5.30e-65 194
Msa0167480 MtrunA17_Chr3g0079201 84.810 79 12 0 62 140 1 79 4.29e-44 139
Msa0167480 MtrunA17_Chr5g0422671 85.075 67 10 0 74 140 2 68 6.45e-37 120
Msa0167480 MtrunA17_Chr3g0092871 87.755 49 6 0 14 62 16 64 3.70e-24 88.6
Msa0167480 MtrunA17_Chr5g0422681 79.592 49 10 0 14 62 16 64 2.68e-20 79.0
Msa0167480 MtrunA17_Chr4g0015931 37.391 115 64 3 26 136 8 118 4.88e-16 69.3
Msa0167480 MtrunA17_CPg0492591 37.391 115 64 3 26 136 8 118 4.88e-16 69.3
Msa0167480 MtrunA17_Chr2g0322131 38.235 102 56 2 26 124 8 105 5.34e-15 67.0
Msa0167480 MtrunA17_Chr4g0017131 37.500 88 48 2 26 110 8 91 1.10e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0167480 AT2G33370.1 97.143 140 4 0 1 140 1 140 2.43e-97 276
Msa0167480 AT1G04480.1 97.143 140 4 0 1 140 1 140 2.43e-97 276
Msa0167480 AT3G04400.1 97.143 140 4 0 1 140 1 140 2.43e-97 276
Msa0167480 AT2G33370.2 98.400 125 2 0 16 140 1 125 1.23e-86 248
Msa0167480 AT3G04400.2 98.400 125 2 0 16 140 1 125 1.23e-86 248
Msa0167480 ATCG00780.1 34.783 115 67 3 26 136 8 118 1.26e-14 66.2

Find 67 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATCCGTATTGACTTAATT+TGG 0.162112 1_4:-49384965 Msa0167480:three_prime_UTR
ACTTATGTTTAAGTATCTTT+TGG 0.240559 1_4:-49385104 Msa0167480:three_prime_UTR
GGATTTAGAAGATGATTAAT+TGG 0.294499 1_4:-49385064 Msa0167480:three_prime_UTR
CTAAGGAATGTGCTGATCTT+TGG 0.329007 1_4:-49385313 Msa0167480:CDS
ATATATGCAAAATGAAGATT+AGG 0.345485 1_4:+49387109 None:intergenic
TAAGTCAAGCAAAGACAAAA+TGG 0.371610 1_4:+49385122 None:intergenic
TATATGCAAAATGAAGATTA+GGG 0.389919 1_4:+49387110 None:intergenic
ATACCTTTCATTTCTCCCTT+AGG 0.394994 1_4:+49385661 None:intergenic
ACAAAATGGTGACAAAGTTT+AGG 0.399734 1_4:+49385136 None:intergenic
CCTACCCTTGATTCCCTTCA+CGG 0.405364 1_4:+49386828 None:intergenic
TCAGCACATTCCTTAGCAAT+TGG 0.405879 1_4:+49385320 None:intergenic
GAACAAGTTCCGTATGTCAC+TGG 0.413902 1_4:-49386917 Msa0167480:CDS
ACATGAAGACACCGTCCTTT+CGG 0.413999 1_4:+49386683 None:intergenic
TTAGAAGATGATTAATTGGT+TGG 0.414162 1_4:-49385060 Msa0167480:three_prime_UTR
AAAACCTTCTTCCTGAGATC+AGG 0.427356 1_4:+49386742 None:intergenic
CGTCTTCCTTCAGCTTGTGC+TGG 0.450748 1_4:-49386799 Msa0167480:CDS
TTAGGTCGTGGTGGTTCCGC+GGG 0.471837 1_4:-49386940 Msa0167480:intron
ATTGGCAATAAAATAATGTA+AGG 0.474592 1_4:-49387189 Msa0167480:five_prime_UTR
CATATCCGTGAAGGGAATCA+AGG 0.482700 1_4:-49386833 Msa0167480:CDS
TTCAGCTTGTGCTGGTGACA+TGG 0.489849 1_4:-49386791 Msa0167480:CDS
TTGGCAGCACTTGCAATCCT+AGG 0.493302 1_4:+49385290 None:intergenic
GGTGTCTTCATGTACTTTGA+AGG 0.499615 1_4:-49386673 Msa0167480:intron
GAATCCAAATTAAGTCAATA+CGG 0.519085 1_4:+49384961 None:intergenic
CGCTGACGAACGATGACAGC+TGG 0.521156 1_4:+49386718 None:intergenic
AGAAGGGAAAGCCTGATCTC+AGG 0.525390 1_4:-49386753 Msa0167480:CDS
TTGGATATATGATATTTGGT+TGG 0.526269 1_4:-49385085 Msa0167480:three_prime_UTR
CAGTTCACCGTCGCCGCCAC+TGG 0.528733 1_4:+49386889 None:intergenic
TTGTGCTGGTGACATGGTGA+TGG 0.531038 1_4:-49386785 Msa0167480:CDS
AATGTGCTGATCTTTGGCCT+AGG 0.543147 1_4:-49385307 Msa0167480:CDS
ACACCGTCCTTTCGGCGCCA+TGG 0.546165 1_4:+49386691 None:intergenic
ATTGTAGGTTCTGCTATCAC+CGG 0.549900 1_4:-49385344 Msa0167480:intron
AACAAGTTCCGTATGTCACT+GGG 0.554811 1_4:-49386916 Msa0167480:CDS
GGTGATGGCTACTGTGAAGA+AGG 0.561037 1_4:-49386770 Msa0167480:CDS
CAGAATCCACACTCATACAA+TGG 0.562785 1_4:+49385265 None:intergenic
GATGTACAGATTCTTTGCTC+CGG 0.563000 1_4:+49386855 None:intergenic
ATTAGGTCGTGGTGGTTCCG+CGG 0.570592 1_4:-49386941 Msa0167480:intron
CTGGTAGACCCAGTGACATA+CGG 0.574663 1_4:+49386908 None:intergenic
AAGCCATGGCGCCGAAAGGA+CGG 0.575094 1_4:-49386694 Msa0167480:CDS
GGGTCTACCAGTGGCGGCGA+CGG 0.576990 1_4:-49386896 Msa0167480:CDS
AAAGCCTGATCTCAGGAAGA+AGG 0.579578 1_4:-49386746 Msa0167480:CDS
TGGTGTCATTGTGAATCCTA+AGG 0.581900 1_4:-49385677 Msa0167480:CDS
CCACACTCATACAATGGCAT+TGG 0.586391 1_4:+49385271 None:intergenic
TCTGTACATCATATCCGTGA+AGG 0.586813 1_4:-49386842 Msa0167480:CDS
ACATTCCTTAGCAATTGGAC+CGG 0.593816 1_4:+49385325 None:intergenic
AATCCTAAGGGAGAAATGAA+AGG 0.599885 1_4:-49385664 Msa0167480:intron
TCGTTCGTCAGCGTAAGCCA+TGG 0.601755 1_4:-49386708 Msa0167480:CDS
GCGTAAGCCATGGCGCCGAA+AGG 0.602704 1_4:-49386698 Msa0167480:CDS
AAATTAAAATTGCCACACAA+TGG 0.602941 1_4:+49385216 None:intergenic
TATCACCGGTCCAATTGCTA+AGG 0.605693 1_4:-49385330 Msa0167480:CDS
CGCAAGAGCAACTAGAGCGG+TGG 0.609423 1_4:-49387079 Msa0167480:five_prime_UTR
CTGTACATCATATCCGTGAA+GGG 0.613193 1_4:-49386841 Msa0167480:CDS
ATGTCACCAGCACAAGCTGA+AGG 0.618315 1_4:+49386793 None:intergenic
AACGAAACCATGTCGAAGAG+AGG 0.621677 1_4:-49387047 Msa0167480:intron
CCAATGCCATTGTATGAGTG+TGG 0.622710 1_4:-49385271 Msa0167480:exon
ATATCCGTGAAGGGAATCAA+GGG 0.625374 1_4:-49386832 Msa0167480:CDS
AAATTGCCACACAATGGCAT+CGG 0.633026 1_4:+49385222 None:intergenic
GTCACTGGGTCTACCAGTGG+CGG 0.643029 1_4:-49386902 Msa0167480:CDS
GTACATACCTCTCTTCGACA+TGG 0.650721 1_4:+49387040 None:intergenic
CCGTGAAGGGAATCAAGGGT+AGG 0.651559 1_4:-49386828 Msa0167480:CDS
GGTGTCATTGTGAATCCTAA+GGG 0.659767 1_4:-49385676 Msa0167480:CDS
TATGTCACTGGGTCTACCAG+TGG 0.664327 1_4:-49386905 Msa0167480:CDS
GTGATGGCTACTGTGAAGAA+GGG 0.669945 1_4:-49386769 Msa0167480:CDS
GTGAACTGTGCTGATAACAC+CGG 0.699857 1_4:-49386874 Msa0167480:CDS
TAGGTCGTGGTGGTTCCGCG+GGG 0.708397 1_4:-49386939 Msa0167480:CDS
AAACGCAAGAGCAACTAGAG+CGG 0.709688 1_4:-49387082 Msa0167480:five_prime_UTR
GTAGTGCCGATGCCATTGTG+TGG 0.742959 1_4:-49385228 Msa0167480:three_prime_UTR
CATACGGAACTTGTTCCCCG+CGG 0.790506 1_4:+49386924 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTTGATTAAAATTGATTTA+GGG - chr1_4:49385683-49385702 Msa0167480:CDS 15.0%
!!! TGTTTTTCTTGTTTAATTTA+CGG - chr1_4:49385755-49385774 Msa0167480:intron 15.0%
!!! TAGATTTCATTTTTAAACTA+CGG + chr1_4:49385884-49385903 None:intergenic 15.0%
!! TTTAACAAAAATCAATTTCA+AGG + chr1_4:49385966-49385985 None:intergenic 15.0%
!! AATAAATCAATTAGACAAAA+TGG + chr1_4:49386722-49386741 None:intergenic 15.0%
!!! AAACTTATCTTTATGTTTTT+AGG - chr1_4:49386947-49386966 Msa0167480:intron 15.0%
!!! TGTTGATTAAAATTGATTTA+GGG - chr1_4:49385683-49385702 Msa0167480:CDS 15.0%
!!! TGTTTTTCTTGTTTAATTTA+CGG - chr1_4:49385755-49385774 Msa0167480:intron 15.0%
!!! TAGATTTCATTTTTAAACTA+CGG + chr1_4:49385884-49385903 None:intergenic 15.0%
!! TTTAACAAAAATCAATTTCA+AGG + chr1_4:49385966-49385985 None:intergenic 15.0%
!! AATAAATCAATTAGACAAAA+TGG + chr1_4:49386722-49386741 None:intergenic 15.0%
!!! AAACTTATCTTTATGTTTTT+AGG - chr1_4:49386947-49386966 Msa0167480:intron 15.0%
!! ATTGGCAATAAAATAATGTA+AGG - chr1_4:49384940-49384959 Msa0167480:three_prime_UTR 20.0%
!!! TTTCTATTGCTTATTTTCTT+GGG + chr1_4:49384966-49384985 None:intergenic 20.0%
!! TATATGCAAAATGAAGATTA+GGG + chr1_4:49385022-49385041 None:intergenic 20.0%
!! ATATATGCAAAATGAAGATT+AGG + chr1_4:49385023-49385042 None:intergenic 20.0%
!!! GTGTTGATTAAAATTGATTT+AGG - chr1_4:49385682-49385701 Msa0167480:CDS 20.0%
!!! TACACTTTTAGAATCAAATT+TGG - chr1_4:49386127-49386146 Msa0167480:intron 20.0%
!!! CTATTTATTGAAAGTTTTTG+AGG - chr1_4:49386170-49386189 Msa0167480:intron 20.0%
!! ATATCAATTCAATCATTGTA+AGG - chr1_4:49386303-49386322 Msa0167480:intron 20.0%
!!! ACTTATGTTTAAGTATCTTT+TGG - chr1_4:49387025-49387044 Msa0167480:intron 20.0%
!!! TCTTTTGGATATATGATATT+TGG - chr1_4:49387040-49387059 Msa0167480:intron 20.0%
!! ATTGGCAATAAAATAATGTA+AGG - chr1_4:49384940-49384959 Msa0167480:three_prime_UTR 20.0%
!!! TTTCTATTGCTTATTTTCTT+GGG + chr1_4:49384966-49384985 None:intergenic 20.0%
!! TATATGCAAAATGAAGATTA+GGG + chr1_4:49385022-49385041 None:intergenic 20.0%
!! ATATATGCAAAATGAAGATT+AGG + chr1_4:49385023-49385042 None:intergenic 20.0%
!!! GTGTTGATTAAAATTGATTT+AGG - chr1_4:49385682-49385701 Msa0167480:CDS 20.0%
!!! TACACTTTTAGAATCAAATT+TGG - chr1_4:49386127-49386146 Msa0167480:intron 20.0%
!!! CTATTTATTGAAAGTTTTTG+AGG - chr1_4:49386170-49386189 Msa0167480:intron 20.0%
!! ATATCAATTCAATCATTGTA+AGG - chr1_4:49386303-49386322 Msa0167480:intron 20.0%
!!! ACTTATGTTTAAGTATCTTT+TGG - chr1_4:49387025-49387044 Msa0167480:intron 20.0%
!!! TCTTTTGGATATATGATATT+TGG - chr1_4:49387040-49387059 Msa0167480:intron 20.0%
!!! CTTTCTATTGCTTATTTTCT+TGG + chr1_4:49384967-49384986 None:intergenic 25.0%
!!! TTCAGTTTTAGGGTTTATTT+GGG + chr1_4:49384995-49385014 None:intergenic 25.0%
!!! TTTCAGTTTTAGGGTTTATT+TGG + chr1_4:49384996-49385015 None:intergenic 25.0%
!!! TTAGGGTTTTTTCAGTTTTA+GGG + chr1_4:49385005-49385024 None:intergenic 25.0%
!!! ATTAGGGTTTTTTCAGTTTT+AGG + chr1_4:49385006-49385025 None:intergenic 25.0%
! AAGCAACATTTCAAAATCAA+AGG + chr1_4:49385512-49385531 None:intergenic 25.0%
!! TGTGAGTTGAACATAAAATT+TGG - chr1_4:49386036-49386055 Msa0167480:intron 25.0%
!! GTGAGTTGAACATAAAATTT+GGG - chr1_4:49386037-49386056 Msa0167480:intron 25.0%
! ACCAATACCAAATATTACAA+GGG + chr1_4:49386417-49386436 None:intergenic 25.0%
! AACCAATACCAAATATTACA+AGG + chr1_4:49386418-49386437 None:intergenic 25.0%
! AATTAGACAAAATGGTACAA+AGG + chr1_4:49386714-49386733 None:intergenic 25.0%
!! TTGTCTAATTGATTTATTGC+TGG - chr1_4:49386724-49386743 Msa0167480:CDS 25.0%
! AAATTAAAATTGCCACACAA+TGG + chr1_4:49386916-49386935 None:intergenic 25.0%
! TTGGATATATGATATTTGGT+TGG - chr1_4:49387044-49387063 Msa0167480:intron 25.0%
! GGATTTAGAAGATGATTAAT+TGG - chr1_4:49387065-49387084 Msa0167480:five_prime_UTR 25.0%
! TTAGAAGATGATTAATTGGT+TGG - chr1_4:49387069-49387088 Msa0167480:five_prime_UTR 25.0%
! AAAGCAATGTTAAAAACACA+TGG + chr1_4:49387099-49387118 None:intergenic 25.0%
! GAATCCAAATTAAGTCAATA+CGG + chr1_4:49387171-49387190 None:intergenic 25.0%
!!! CTTTCTATTGCTTATTTTCT+TGG + chr1_4:49384967-49384986 None:intergenic 25.0%
!!! TTCAGTTTTAGGGTTTATTT+GGG + chr1_4:49384995-49385014 None:intergenic 25.0%
!!! TTTCAGTTTTAGGGTTTATT+TGG + chr1_4:49384996-49385015 None:intergenic 25.0%
!!! TTAGGGTTTTTTCAGTTTTA+GGG + chr1_4:49385005-49385024 None:intergenic 25.0%
!!! ATTAGGGTTTTTTCAGTTTT+AGG + chr1_4:49385006-49385025 None:intergenic 25.0%
! AAGCAACATTTCAAAATCAA+AGG + chr1_4:49385512-49385531 None:intergenic 25.0%
!! TGTGAGTTGAACATAAAATT+TGG - chr1_4:49386036-49386055 Msa0167480:intron 25.0%
!! GTGAGTTGAACATAAAATTT+GGG - chr1_4:49386037-49386056 Msa0167480:intron 25.0%
! ACCAATACCAAATATTACAA+GGG + chr1_4:49386417-49386436 None:intergenic 25.0%
! AACCAATACCAAATATTACA+AGG + chr1_4:49386418-49386437 None:intergenic 25.0%
! AATTAGACAAAATGGTACAA+AGG + chr1_4:49386714-49386733 None:intergenic 25.0%
!! TTGTCTAATTGATTTATTGC+TGG - chr1_4:49386724-49386743 Msa0167480:CDS 25.0%
! AAATTAAAATTGCCACACAA+TGG + chr1_4:49386916-49386935 None:intergenic 25.0%
! TTGGATATATGATATTTGGT+TGG - chr1_4:49387044-49387063 Msa0167480:intron 25.0%
! GGATTTAGAAGATGATTAAT+TGG - chr1_4:49387065-49387084 Msa0167480:five_prime_UTR 25.0%
! TTAGAAGATGATTAATTGGT+TGG - chr1_4:49387069-49387088 Msa0167480:five_prime_UTR 25.0%
! AAAGCAATGTTAAAAACACA+TGG + chr1_4:49387099-49387118 None:intergenic 25.0%
! GAATCCAAATTAAGTCAATA+CGG + chr1_4:49387171-49387190 None:intergenic 25.0%
!!! TTTTAGGGTTTATTTGGGTT+GGG + chr1_4:49384990-49385009 None:intergenic 30.0%
ACAACAATTGAATCTGAGAA+AGG + chr1_4:49385128-49385147 None:intergenic 30.0%
! TGTATCCCTATTTTCTGATT+AGG - chr1_4:49385171-49385190 Msa0167480:three_prime_UTR 30.0%
! TTCTGATTGGTCATTCATAT+TGG - chr1_4:49385559-49385578 Msa0167480:intron 30.0%
! TCTGATTGGTCATTCATATT+GGG - chr1_4:49385560-49385579 Msa0167480:intron 30.0%
! AAATTGATTTAGGGTGTGTT+TGG - chr1_4:49385692-49385711 Msa0167480:intron 30.0%
TTTCAAGGAATCAATTCACT+TGG + chr1_4:49385951-49385970 None:intergenic 30.0%
!!! TTTTAGAATCAAGAGCTTCA+AGG - chr1_4:49386072-49386091 Msa0167480:intron 30.0%
TGATGTACCCTTGTAATATT+TGG - chr1_4:49386407-49386426 Msa0167480:intron 30.0%
ACCCTTGTAATATTTGGTAT+TGG - chr1_4:49386413-49386432 Msa0167480:intron 30.0%
AACATATTTGCATGAGCAAT+AGG + chr1_4:49386544-49386563 None:intergenic 30.0%
TAGCAAACTAACAAAAAGAC+AGG + chr1_4:49386683-49386702 None:intergenic 30.0%
ACAAAATGGTGACAAAGTTT+AGG + chr1_4:49386996-49387015 None:intergenic 30.0%
TAAGTCAAGCAAAGACAAAA+TGG + chr1_4:49387010-49387029 None:intergenic 30.0%
!! TCATCCGTATTGACTTAATT+TGG - chr1_4:49387164-49387183 Msa0167480:five_prime_UTR 30.0%
!!! TTTTAGGGTTTATTTGGGTT+GGG + chr1_4:49384990-49385009 None:intergenic 30.0%
ACAACAATTGAATCTGAGAA+AGG + chr1_4:49385128-49385147 None:intergenic 30.0%
! TGTATCCCTATTTTCTGATT+AGG - chr1_4:49385171-49385190 Msa0167480:three_prime_UTR 30.0%
! TTCTGATTGGTCATTCATAT+TGG - chr1_4:49385559-49385578 Msa0167480:intron 30.0%
! TCTGATTGGTCATTCATATT+GGG - chr1_4:49385560-49385579 Msa0167480:intron 30.0%
! AAATTGATTTAGGGTGTGTT+TGG - chr1_4:49385692-49385711 Msa0167480:intron 30.0%
TTTCAAGGAATCAATTCACT+TGG + chr1_4:49385951-49385970 None:intergenic 30.0%
!!! TTTTAGAATCAAGAGCTTCA+AGG - chr1_4:49386072-49386091 Msa0167480:intron 30.0%
TGATGTACCCTTGTAATATT+TGG - chr1_4:49386407-49386426 Msa0167480:intron 30.0%
ACCCTTGTAATATTTGGTAT+TGG - chr1_4:49386413-49386432 Msa0167480:intron 30.0%
AACATATTTGCATGAGCAAT+AGG + chr1_4:49386544-49386563 None:intergenic 30.0%
TAGCAAACTAACAAAAAGAC+AGG + chr1_4:49386683-49386702 None:intergenic 30.0%
ACAAAATGGTGACAAAGTTT+AGG + chr1_4:49386996-49387015 None:intergenic 30.0%
TAAGTCAAGCAAAGACAAAA+TGG + chr1_4:49387010-49387029 None:intergenic 30.0%
!! TCATCCGTATTGACTTAATT+TGG - chr1_4:49387164-49387183 Msa0167480:five_prime_UTR 30.0%
!!! GTTTTAGGGTTTATTTGGGT+TGG + chr1_4:49384991-49385010 None:intergenic 35.0%
CACGACCTAATCAGAAAATA+GGG + chr1_4:49385179-49385198 None:intergenic 35.0%
! CTGATTGGTCATTCATATTG+GGG - chr1_4:49385561-49385580 Msa0167480:intron 35.0%
!! ATCAATTCACTTGGTGTGTT+TGG + chr1_4:49385942-49385961 None:intergenic 35.0%
AGAATCAAATTTGGTTGCAG+TGG - chr1_4:49386136-49386155 Msa0167480:intron 35.0%
GAATCAAATTTGGTTGCAGT+GGG - chr1_4:49386137-49386156 Msa0167480:intron 35.0%
!! TTGGTTTTTGCAGATAATGC+TGG - chr1_4:49386432-49386451 Msa0167480:intron 35.0%
AATCCTAAGGGAGAAATGAA+AGG - chr1_4:49386465-49386484 Msa0167480:intron 35.0%
ATACCTTTCATTTCTCCCTT+AGG + chr1_4:49386471-49386490 None:intergenic 35.0%
CACATTGTAACAAAGCCAAA+AGG + chr1_4:49386616-49386635 None:intergenic 35.0%
CAAACTAACAAAAAGACAGG+TGG + chr1_4:49386680-49386699 None:intergenic 35.0%
TATGTCATGCTGTTCATTGT+AGG - chr1_4:49386770-49386789 Msa0167480:CDS 35.0%
!!! GTTTTAGGGTTTATTTGGGT+TGG + chr1_4:49384991-49385010 None:intergenic 35.0%
CACGACCTAATCAGAAAATA+GGG + chr1_4:49385179-49385198 None:intergenic 35.0%
! CTGATTGGTCATTCATATTG+GGG - chr1_4:49385561-49385580 Msa0167480:intron 35.0%
!! ATCAATTCACTTGGTGTGTT+TGG + chr1_4:49385942-49385961 None:intergenic 35.0%
AGAATCAAATTTGGTTGCAG+TGG - chr1_4:49386136-49386155 Msa0167480:intron 35.0%
GAATCAAATTTGGTTGCAGT+GGG - chr1_4:49386137-49386156 Msa0167480:intron 35.0%
!! TTGGTTTTTGCAGATAATGC+TGG - chr1_4:49386432-49386451 Msa0167480:intron 35.0%
AATCCTAAGGGAGAAATGAA+AGG - chr1_4:49386465-49386484 Msa0167480:intron 35.0%
ATACCTTTCATTTCTCCCTT+AGG + chr1_4:49386471-49386490 None:intergenic 35.0%
CACATTGTAACAAAGCCAAA+AGG + chr1_4:49386616-49386635 None:intergenic 35.0%
CAAACTAACAAAAAGACAGG+TGG + chr1_4:49386680-49386699 None:intergenic 35.0%
TATGTCATGCTGTTCATTGT+AGG - chr1_4:49386770-49386789 Msa0167480:CDS 35.0%
CCACGACCTAATCAGAAAAT+AGG + chr1_4:49385180-49385199 None:intergenic 40.0%
! CCTATTTTCTGATTAGGTCG+TGG - chr1_4:49385177-49385196 Msa0167480:three_prime_UTR 40.0%
! ATTTTCTGATTAGGTCGTGG+TGG - chr1_4:49385180-49385199 Msa0167480:three_prime_UTR 40.0%
AACAAGTTCCGTATGTCACT+GGG - chr1_4:49385213-49385232 Msa0167480:three_prime_UTR 40.0%
GATGTACAGATTCTTTGCTC+CGG + chr1_4:49385277-49385296 None:intergenic 40.0%
TCTGTACATCATATCCGTGA+AGG - chr1_4:49385287-49385306 Msa0167480:CDS 40.0%
CTGTACATCATATCCGTGAA+GGG - chr1_4:49385288-49385307 Msa0167480:CDS 40.0%
ATATCCGTGAAGGGAATCAA+GGG - chr1_4:49385297-49385316 Msa0167480:CDS 40.0%
AAAACCTTCTTCCTGAGATC+AGG + chr1_4:49385390-49385409 None:intergenic 40.0%
GGTGTCTTCATGTACTTTGA+AGG - chr1_4:49385456-49385475 Msa0167480:intron 40.0%
TGAGTGATCTGTGTTCTGAT+TGG - chr1_4:49385546-49385565 Msa0167480:intron 40.0%
! CACATCATGCTGTTTAAGAC+TGG + chr1_4:49385608-49385627 None:intergenic 40.0%
! TTTAGGGTGTGTTTGGATTG+AGG - chr1_4:49385699-49385718 Msa0167480:intron 40.0%
TTAGGGTGTGTTTGGATTGA+GGG - chr1_4:49385700-49385719 Msa0167480:intron 40.0%
TGTGTTTGGATTGAGGGTTT+AGG - chr1_4:49385706-49385725 Msa0167480:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG - chr1_4:49385710-49385729 Msa0167480:intron 40.0%
!! ATTCACTTGGTGTGTTTGGA+TGG + chr1_4:49385938-49385957 None:intergenic 40.0%
TCAAGGAGAATCAATTCGAG+TGG - chr1_4:49386089-49386108 Msa0167480:intron 40.0%
! TACAAGGGTACATCAGCATT+AGG + chr1_4:49386402-49386421 None:intergenic 40.0%
!! TGGTGTCATTGTGAATCCTA+AGG - chr1_4:49386452-49386471 Msa0167480:intron 40.0%
!! GGTGTCATTGTGAATCCTAA+GGG - chr1_4:49386453-49386472 Msa0167480:intron 40.0%
ATTGTAGGTTCTGCTATCAC+CGG - chr1_4:49386785-49386804 Msa0167480:CDS 40.0%
ACATTCCTTAGCAATTGGAC+CGG + chr1_4:49386807-49386826 None:intergenic 40.0%
TCAGCACATTCCTTAGCAAT+TGG + chr1_4:49386812-49386831 None:intergenic 40.0%
! CTAAGGAATGTGCTGATCTT+TGG - chr1_4:49386816-49386835 Msa0167480:CDS 40.0%
CAGAATCCACACTCATACAA+TGG + chr1_4:49386867-49386886 None:intergenic 40.0%
AAATTGCCACACAATGGCAT+CGG + chr1_4:49386910-49386929 None:intergenic 40.0%
CCACGACCTAATCAGAAAAT+AGG + chr1_4:49385180-49385199 None:intergenic 40.0%
! CCTATTTTCTGATTAGGTCG+TGG - chr1_4:49385177-49385196 Msa0167480:three_prime_UTR 40.0%
! ATTTTCTGATTAGGTCGTGG+TGG - chr1_4:49385180-49385199 Msa0167480:three_prime_UTR 40.0%
AACAAGTTCCGTATGTCACT+GGG - chr1_4:49385213-49385232 Msa0167480:three_prime_UTR 40.0%
GATGTACAGATTCTTTGCTC+CGG + chr1_4:49385277-49385296 None:intergenic 40.0%
TCTGTACATCATATCCGTGA+AGG - chr1_4:49385287-49385306 Msa0167480:CDS 40.0%
CTGTACATCATATCCGTGAA+GGG - chr1_4:49385288-49385307 Msa0167480:CDS 40.0%
ATATCCGTGAAGGGAATCAA+GGG - chr1_4:49385297-49385316 Msa0167480:CDS 40.0%
AAAACCTTCTTCCTGAGATC+AGG + chr1_4:49385390-49385409 None:intergenic 40.0%
GGTGTCTTCATGTACTTTGA+AGG - chr1_4:49385456-49385475 Msa0167480:intron 40.0%
TGAGTGATCTGTGTTCTGAT+TGG - chr1_4:49385546-49385565 Msa0167480:intron 40.0%
! CACATCATGCTGTTTAAGAC+TGG + chr1_4:49385608-49385627 None:intergenic 40.0%
! TTTAGGGTGTGTTTGGATTG+AGG - chr1_4:49385699-49385718 Msa0167480:intron 40.0%
TTAGGGTGTGTTTGGATTGA+GGG - chr1_4:49385700-49385719 Msa0167480:intron 40.0%
TGTGTTTGGATTGAGGGTTT+AGG - chr1_4:49385706-49385725 Msa0167480:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG - chr1_4:49385710-49385729 Msa0167480:intron 40.0%
!! ATTCACTTGGTGTGTTTGGA+TGG + chr1_4:49385938-49385957 None:intergenic 40.0%
TCAAGGAGAATCAATTCGAG+TGG - chr1_4:49386089-49386108 Msa0167480:intron 40.0%
! TACAAGGGTACATCAGCATT+AGG + chr1_4:49386402-49386421 None:intergenic 40.0%
!! TGGTGTCATTGTGAATCCTA+AGG - chr1_4:49386452-49386471 Msa0167480:intron 40.0%
!! GGTGTCATTGTGAATCCTAA+GGG - chr1_4:49386453-49386472 Msa0167480:intron 40.0%
ATTGTAGGTTCTGCTATCAC+CGG - chr1_4:49386785-49386804 Msa0167480:CDS 40.0%
ACATTCCTTAGCAATTGGAC+CGG + chr1_4:49386807-49386826 None:intergenic 40.0%
TCAGCACATTCCTTAGCAAT+TGG + chr1_4:49386812-49386831 None:intergenic 40.0%
! CTAAGGAATGTGCTGATCTT+TGG - chr1_4:49386816-49386835 Msa0167480:CDS 40.0%
CAGAATCCACACTCATACAA+TGG + chr1_4:49386867-49386886 None:intergenic 40.0%
AAATTGCCACACAATGGCAT+CGG + chr1_4:49386910-49386929 None:intergenic 40.0%
AAACGCAAGAGCAACTAGAG+CGG - chr1_4:49385047-49385066 Msa0167480:three_prime_UTR 45.0%
AACGAAACCATGTCGAAGAG+AGG - chr1_4:49385082-49385101 Msa0167480:three_prime_UTR 45.0%
GTACATACCTCTCTTCGACA+TGG + chr1_4:49385092-49385111 None:intergenic 45.0%
! TCGAAGAGAGGTATGTACAG+TGG - chr1_4:49385094-49385113 Msa0167480:three_prime_UTR 45.0%
GAACAAGTTCCGTATGTCAC+TGG - chr1_4:49385212-49385231 Msa0167480:three_prime_UTR 45.0%
! GTGAACTGTGCTGATAACAC+CGG - chr1_4:49385255-49385274 Msa0167480:three_prime_UTR 45.0%
CATATCCGTGAAGGGAATCA+AGG - chr1_4:49385296-49385315 Msa0167480:CDS 45.0%
GTGATGGCTACTGTGAAGAA+GGG - chr1_4:49385360-49385379 Msa0167480:intron 45.0%
AAAGCCTGATCTCAGGAAGA+AGG - chr1_4:49385383-49385402 Msa0167480:intron 45.0%
ACATGAAGACACCGTCCTTT+CGG + chr1_4:49385449-49385468 None:intergenic 45.0%
AACGAGATTTACCAGCAGAC+AGG + chr1_4:49385652-49385671 None:intergenic 45.0%
GTTTGGATTGAGGGTTTAGG+AGG - chr1_4:49385709-49385728 Msa0167480:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG - chr1_4:49385711-49385730 Msa0167480:intron 45.0%
TTTGGATGGAGGGTTTAGGA+GGG + chr1_4:49385924-49385943 None:intergenic 45.0%
TGTGTTTGGATGGAGGGTTT+AGG + chr1_4:49385928-49385947 None:intergenic 45.0%
!! ACTTGGTGTGTTTGGATGGA+GGG + chr1_4:49385934-49385953 None:intergenic 45.0%
ATTTGGTTGCAGTGGGTAAC+TGG - chr1_4:49386144-49386163 Msa0167480:intron 45.0%
! TACACTTGCTCAGTGCCTTT+TGG - chr1_4:49386598-49386617 Msa0167480:intron 45.0%
TATCACCGGTCCAATTGCTA+AGG - chr1_4:49386799-49386818 Msa0167480:CDS 45.0%
! AATGTGCTGATCTTTGGCCT+AGG - chr1_4:49386822-49386841 Msa0167480:CDS 45.0%
CCACACTCATACAATGGCAT+TGG + chr1_4:49386861-49386880 None:intergenic 45.0%
CCAATGCCATTGTATGAGTG+TGG - chr1_4:49386858-49386877 Msa0167480:CDS 45.0%
AAACGCAAGAGCAACTAGAG+CGG - chr1_4:49385047-49385066 Msa0167480:three_prime_UTR 45.0%
AACGAAACCATGTCGAAGAG+AGG - chr1_4:49385082-49385101 Msa0167480:three_prime_UTR 45.0%
GTACATACCTCTCTTCGACA+TGG + chr1_4:49385092-49385111 None:intergenic 45.0%
! TCGAAGAGAGGTATGTACAG+TGG - chr1_4:49385094-49385113 Msa0167480:three_prime_UTR 45.0%
GAACAAGTTCCGTATGTCAC+TGG - chr1_4:49385212-49385231 Msa0167480:three_prime_UTR 45.0%
! GTGAACTGTGCTGATAACAC+CGG - chr1_4:49385255-49385274 Msa0167480:three_prime_UTR 45.0%
CATATCCGTGAAGGGAATCA+AGG - chr1_4:49385296-49385315 Msa0167480:CDS 45.0%
GTGATGGCTACTGTGAAGAA+GGG - chr1_4:49385360-49385379 Msa0167480:intron 45.0%
AAAGCCTGATCTCAGGAAGA+AGG - chr1_4:49385383-49385402 Msa0167480:intron 45.0%
ACATGAAGACACCGTCCTTT+CGG + chr1_4:49385449-49385468 None:intergenic 45.0%
AACGAGATTTACCAGCAGAC+AGG + chr1_4:49385652-49385671 None:intergenic 45.0%
GTTTGGATTGAGGGTTTAGG+AGG - chr1_4:49385709-49385728 Msa0167480:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG - chr1_4:49385711-49385730 Msa0167480:intron 45.0%
TTTGGATGGAGGGTTTAGGA+GGG + chr1_4:49385924-49385943 None:intergenic 45.0%
TGTGTTTGGATGGAGGGTTT+AGG + chr1_4:49385928-49385947 None:intergenic 45.0%
!! ACTTGGTGTGTTTGGATGGA+GGG + chr1_4:49385934-49385953 None:intergenic 45.0%
ATTTGGTTGCAGTGGGTAAC+TGG - chr1_4:49386144-49386163 Msa0167480:intron 45.0%
! TACACTTGCTCAGTGCCTTT+TGG - chr1_4:49386598-49386617 Msa0167480:intron 45.0%
TATCACCGGTCCAATTGCTA+AGG - chr1_4:49386799-49386818 Msa0167480:CDS 45.0%
! AATGTGCTGATCTTTGGCCT+AGG - chr1_4:49386822-49386841 Msa0167480:CDS 45.0%
CCACACTCATACAATGGCAT+TGG + chr1_4:49386861-49386880 None:intergenic 45.0%
CCAATGCCATTGTATGAGTG+TGG - chr1_4:49386858-49386877 Msa0167480:CDS 45.0%
CTGGTAGACCCAGTGACATA+CGG + chr1_4:49385224-49385243 None:intergenic 50.0%
TATGTCACTGGGTCTACCAG+TGG - chr1_4:49385224-49385243 Msa0167480:three_prime_UTR 50.0%
CCTACCCTTGATTCCCTTCA+CGG + chr1_4:49385304-49385323 None:intergenic 50.0%
ATGTCACCAGCACAAGCTGA+AGG + chr1_4:49385339-49385358 None:intergenic 50.0%
! TTCAGCTTGTGCTGGTGACA+TGG - chr1_4:49385338-49385357 Msa0167480:CDS 50.0%
! TTGTGCTGGTGACATGGTGA+TGG - chr1_4:49385344-49385363 Msa0167480:intron 50.0%
! GGTGATGGCTACTGTGAAGA+AGG - chr1_4:49385359-49385378 Msa0167480:intron 50.0%
AGAAGGGAAAGCCTGATCTC+AGG - chr1_4:49385376-49385395 Msa0167480:intron 50.0%
TCATTGTGCTACCTGTCTGC+TGG - chr1_4:49385638-49385657 Msa0167480:intron 50.0%
ATTGAGGGTTTAGGAGGGGA+AGG - chr1_4:49385715-49385734 Msa0167480:intron 50.0%
TTGAGGGTTTAGGAGGGGAA+GGG - chr1_4:49385716-49385735 Msa0167480:intron 50.0%
TTGGATGGAGGGTTTAGGAG+GGG + chr1_4:49385923-49385942 None:intergenic 50.0%
GTTTGGATGGAGGGTTTAGG+AGG + chr1_4:49385925-49385944 None:intergenic 50.0%
!! CACTTGGTGTGTTTGGATGG+AGG + chr1_4:49385935-49385954 None:intergenic 50.0%
TTGGCAGCACTTGCAATCCT+AGG + chr1_4:49386842-49386861 None:intergenic 50.0%
CTGGTAGACCCAGTGACATA+CGG + chr1_4:49385224-49385243 None:intergenic 50.0%
TATGTCACTGGGTCTACCAG+TGG - chr1_4:49385224-49385243 Msa0167480:three_prime_UTR 50.0%
CCTACCCTTGATTCCCTTCA+CGG + chr1_4:49385304-49385323 None:intergenic 50.0%
ATGTCACCAGCACAAGCTGA+AGG + chr1_4:49385339-49385358 None:intergenic 50.0%
! TTCAGCTTGTGCTGGTGACA+TGG - chr1_4:49385338-49385357 Msa0167480:CDS 50.0%
! TTGTGCTGGTGACATGGTGA+TGG - chr1_4:49385344-49385363 Msa0167480:intron 50.0%
! GGTGATGGCTACTGTGAAGA+AGG - chr1_4:49385359-49385378 Msa0167480:intron 50.0%
AGAAGGGAAAGCCTGATCTC+AGG - chr1_4:49385376-49385395 Msa0167480:intron 50.0%
TCATTGTGCTACCTGTCTGC+TGG - chr1_4:49385638-49385657 Msa0167480:intron 50.0%
ATTGAGGGTTTAGGAGGGGA+AGG - chr1_4:49385715-49385734 Msa0167480:intron 50.0%
TTGAGGGTTTAGGAGGGGAA+GGG - chr1_4:49385716-49385735 Msa0167480:intron 50.0%
TTGGATGGAGGGTTTAGGAG+GGG + chr1_4:49385923-49385942 None:intergenic 50.0%
GTTTGGATGGAGGGTTTAGG+AGG + chr1_4:49385925-49385944 None:intergenic 50.0%
!! CACTTGGTGTGTTTGGATGG+AGG + chr1_4:49385935-49385954 None:intergenic 50.0%
TTGGCAGCACTTGCAATCCT+AGG + chr1_4:49386842-49386861 None:intergenic 50.0%
ATTAGGTCGTGGTGGTTCCG+CGG - chr1_4:49385188-49385207 Msa0167480:three_prime_UTR 55.0%
! CATACGGAACTTGTTCCCCG+CGG + chr1_4:49385208-49385227 None:intergenic 55.0%
CCGTGAAGGGAATCAAGGGT+AGG - chr1_4:49385301-49385320 Msa0167480:CDS 55.0%
CGTCTTCCTTCAGCTTGTGC+TGG - chr1_4:49385330-49385349 Msa0167480:CDS 55.0%
TCGTTCGTCAGCGTAAGCCA+TGG - chr1_4:49385421-49385440 Msa0167480:intron 55.0%
GGTTTAGGAGGGGAAGGGAA+GGG - chr1_4:49385721-49385740 Msa0167480:intron 55.0%
TGGAGGGTTTAGGAGGGGAA+GGG + chr1_4:49385918-49385937 None:intergenic 55.0%
ATGGAGGGTTTAGGAGGGGA+AGG + chr1_4:49385919-49385938 None:intergenic 55.0%
!! GTAGTGCCGATGCCATTGTG+TGG - chr1_4:49386901-49386920 Msa0167480:CDS 55.0%
ATTAGGTCGTGGTGGTTCCG+CGG - chr1_4:49385188-49385207 Msa0167480:three_prime_UTR 55.0%
! CATACGGAACTTGTTCCCCG+CGG + chr1_4:49385208-49385227 None:intergenic 55.0%
CCGTGAAGGGAATCAAGGGT+AGG - chr1_4:49385301-49385320 Msa0167480:CDS 55.0%
CGTCTTCCTTCAGCTTGTGC+TGG - chr1_4:49385330-49385349 Msa0167480:CDS 55.0%
TCGTTCGTCAGCGTAAGCCA+TGG - chr1_4:49385421-49385440 Msa0167480:intron 55.0%
GGTTTAGGAGGGGAAGGGAA+GGG - chr1_4:49385721-49385740 Msa0167480:intron 55.0%
TGGAGGGTTTAGGAGGGGAA+GGG + chr1_4:49385918-49385937 None:intergenic 55.0%
ATGGAGGGTTTAGGAGGGGA+AGG + chr1_4:49385919-49385938 None:intergenic 55.0%
!! GTAGTGCCGATGCCATTGTG+TGG - chr1_4:49386901-49386920 Msa0167480:CDS 55.0%
CGCAAGAGCAACTAGAGCGG+TGG - chr1_4:49385050-49385069 Msa0167480:three_prime_UTR 60.0%
TTAGGTCGTGGTGGTTCCGC+GGG - chr1_4:49385189-49385208 Msa0167480:three_prime_UTR 60.0%
GTCACTGGGTCTACCAGTGG+CGG - chr1_4:49385227-49385246 Msa0167480:three_prime_UTR 60.0%
CGCTGACGAACGATGACAGC+TGG + chr1_4:49385414-49385433 None:intergenic 60.0%
! AAGCCATGGCGCCGAAAGGA+CGG - chr1_4:49385435-49385454 Msa0167480:intron 60.0%
GGGTTTAGGAGGGGAAGGGA+AGG - chr1_4:49385720-49385739 Msa0167480:intron 60.0%
TTAGGAGGGGAAGGGAAGGG+AGG - chr1_4:49385724-49385743 Msa0167480:intron 60.0%
TAGGAGGGGAAGGGAAGGGA+GGG - chr1_4:49385725-49385744 Msa0167480:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr1_4:49385913-49385932 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr1_4:49385720-49385739 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr1_4:49385719-49385738 None:intergenic 60.0%
CGCAAGAGCAACTAGAGCGG+TGG - chr1_4:49385050-49385069 Msa0167480:three_prime_UTR 60.0%
TTAGGTCGTGGTGGTTCCGC+GGG - chr1_4:49385189-49385208 Msa0167480:three_prime_UTR 60.0%
GTCACTGGGTCTACCAGTGG+CGG - chr1_4:49385227-49385246 Msa0167480:three_prime_UTR 60.0%
CGCTGACGAACGATGACAGC+TGG + chr1_4:49385414-49385433 None:intergenic 60.0%
! AAGCCATGGCGCCGAAAGGA+CGG - chr1_4:49385435-49385454 Msa0167480:intron 60.0%
GGGTTTAGGAGGGGAAGGGA+AGG - chr1_4:49385720-49385739 Msa0167480:intron 60.0%
TTAGGAGGGGAAGGGAAGGG+AGG - chr1_4:49385724-49385743 Msa0167480:intron 60.0%
TAGGAGGGGAAGGGAAGGGA+GGG - chr1_4:49385725-49385744 Msa0167480:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr1_4:49385913-49385932 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr1_4:49385720-49385739 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr1_4:49385719-49385738 None:intergenic 60.0%
TAGGTCGTGGTGGTTCCGCG+GGG - chr1_4:49385190-49385209 Msa0167480:three_prime_UTR 65.0%
! GCGTAAGCCATGGCGCCGAA+AGG - chr1_4:49385431-49385450 Msa0167480:intron 65.0%
ACACCGTCCTTTCGGCGCCA+TGG + chr1_4:49385441-49385460 None:intergenic 65.0%
AGGAGGGGAAGGGAAGGGAG+GGG - chr1_4:49385726-49385745 Msa0167480:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG + chr1_4:49385909-49385928 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG + chr1_4:49385910-49385929 None:intergenic 65.0%
TAGGTCGTGGTGGTTCCGCG+GGG - chr1_4:49385190-49385209 Msa0167480:three_prime_UTR 65.0%
! GCGTAAGCCATGGCGCCGAA+AGG - chr1_4:49385431-49385450 Msa0167480:intron 65.0%
ACACCGTCCTTTCGGCGCCA+TGG + chr1_4:49385441-49385460 None:intergenic 65.0%
AGGAGGGGAAGGGAAGGGAG+GGG - chr1_4:49385726-49385745 Msa0167480:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG + chr1_4:49385909-49385928 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG + chr1_4:49385910-49385929 None:intergenic 65.0%
GGGTCTACCAGTGGCGGCGA+CGG - chr1_4:49385233-49385252 Msa0167480:three_prime_UTR 70.0%
CAGTTCACCGTCGCCGCCAC+TGG + chr1_4:49385243-49385262 None:intergenic 70.0%
AGGGGAAGGGAAGGGAGGGG+AGG - chr1_4:49385729-49385748 Msa0167480:intron 70.0%
GGGGAAGGGAAGGGAGGGGA+GGG - chr1_4:49385730-49385749 Msa0167480:intron 70.0%
GGGTCTACCAGTGGCGGCGA+CGG - chr1_4:49385233-49385252 Msa0167480:three_prime_UTR 70.0%
CAGTTCACCGTCGCCGCCAC+TGG + chr1_4:49385243-49385262 None:intergenic 70.0%
AGGGGAAGGGAAGGGAGGGG+AGG - chr1_4:49385729-49385748 Msa0167480:intron 70.0%
GGGGAAGGGAAGGGAGGGGA+GGG - chr1_4:49385730-49385749 Msa0167480:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 49384935 49387216 49384935 ID=Msa0167480;Name=Msa0167480
chr1_4 mRNA 49384935 49387216 49384935 ID=Msa0167480-mRNA-1;Parent=Msa0167480;Name=Msa0167480-mRNA-1;_AED=0.01;_eAED=0.01;_QI=156|1|1|1|1|1|4|342|140
chr1_4 exon 49384935 49385359 49384935 ID=Msa0167480-mRNA-1:exon:14495;Parent=Msa0167480-mRNA-1
chr1_4 exon 49385665 49385706 49385665 ID=Msa0167480-mRNA-1:exon:14494;Parent=Msa0167480-mRNA-1
chr1_4 exon 49386674 49386958 49386674 ID=Msa0167480-mRNA-1:exon:14493;Parent=Msa0167480-mRNA-1
chr1_4 exon 49387048 49387216 49387048 ID=Msa0167480-mRNA-1:exon:14492;Parent=Msa0167480-mRNA-1
chr1_4 five_prime_UTR 49387061 49387216 49387061 ID=Msa0167480-mRNA-1:five_prime_utr;Parent=Msa0167480-mRNA-1
chr1_4 CDS 49387048 49387060 49387048 ID=Msa0167480-mRNA-1:cds;Parent=Msa0167480-mRNA-1
chr1_4 CDS 49386674 49386958 49386674 ID=Msa0167480-mRNA-1:cds;Parent=Msa0167480-mRNA-1
chr1_4 CDS 49385665 49385706 49385665 ID=Msa0167480-mRNA-1:cds;Parent=Msa0167480-mRNA-1
chr1_4 CDS 49385277 49385359 49385277 ID=Msa0167480-mRNA-1:cds;Parent=Msa0167480-mRNA-1
chr1_4 three_prime_UTR 49384935 49385276 49384935 ID=Msa0167480-mRNA-1:three_prime_utr;Parent=Msa0167480-mRNA-1
Gene Sequence

>Msa0167480

ATGTCGAAGAGAGGTCGTGGTGGTTCCGCGGGGAACAAGTTCCGTATGTCACTGGGTCTACCAGTGGCGGCGACGGTGAACTGTGCTGATAACACCGGAGCAAAGAATCTGTACATCATATCCGTGAAGGGAATCAAGGGTAGGTTGAATCGTCTTCCTTCAGCTTGTGCTGGTGACATGGTGATGGCTACTGTGAAGAAGGGAAAGCCTGATCTCAGGAAGAAGGTTTTGCCAGCTGTCATCGTTCGTCAGCGTAAGCCATGGCGCCGAAAGGACGGTGTCTTCATGTACTTTGAAGATAATGCTGGTGTCATTGTGAATCCTAAGGGAGAAATGAAAGGTTCTGCTATCACCGGTCCAATTGCTAAGGAATGTGCTGATCTTTGGCCTAGGATTGCAAGTGCTGCCAATGCCATTGTATGA

Protein sequence

>Msa0167480

MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACAGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIAKECADLWPRIASAANAIV*