AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1373820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1373820 MtrunA17_Chr7g0260571 99.525 421 2 0 5 425 178 598 0.0 871
Msa1373820 MtrunA17_Chr1g0184861 74.645 422 103 2 7 425 4 424 0.0 674
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1373820 AT2G38840.2 75.000 416 104 0 5 420 21 436 0.0 683
Msa1373820 AT2G38840.1 75.000 416 104 0 5 420 179 594 0.0 682

Find 161 sgRNAs with CRISPR-Local

Find 461 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGGGATTCATTGGCTATTA+TGG 0.116641 tig0019464:+17928 Msa1373820:CDS
TGATACTGACTATCTTTATT+AGG 0.166330 tig0019464:-17706 None:intergenic
GTACAAGGAAAATCTCTAAA+TGG 0.236462 tig0019464:+18240 Msa1373820:CDS
GCATTCGATCAGCAACATTT+TGG 0.262273 tig0019464:+19072 Msa1373820:CDS
AATCATGTCATACAGGAATA+TGG 0.275361 tig0019464:+16738 Msa1373820:intron
GTCATACAGGAATATGGATT+TGG 0.280139 tig0019464:+16744 Msa1373820:intron
CGGGATTCATTGGCTATTAT+GGG 0.286021 tig0019464:+17929 Msa1373820:CDS
ATTCTATATTGGCGGTGTTA+TGG 0.294127 tig0019464:+20978 Msa1373820:CDS
CTCTCTCTTTCTTGTTATGA+AGG 0.295186 tig0019464:+16471 Msa1373820:five_prime_UTR
GATACTGACTATCTTTATTA+GGG 0.305401 tig0019464:-17705 None:intergenic
TTGGGGAACACCTATAGATT+TGG 0.306157 tig0019464:+16763 Msa1373820:five_prime_UTR
TTCTATATTGGCGGTGTTAT+GGG 0.307055 tig0019464:+20979 Msa1373820:CDS
ATCATCAGATCAATCAAATT+CGG 0.317922 tig0019464:+17909 Msa1373820:intron
TCATACAGGAATATGGATTT+GGG 0.336399 tig0019464:+16745 Msa1373820:intron
TCATCACTCCGATATTCCTT+TGG 0.339042 tig0019464:+21106 Msa1373820:three_prime_UTR
CGGTTGATGAAAATTGATAA+TGG 0.341994 tig0019464:-14476 None:intergenic
AGACCTACACAAGGTTGTTT+TGG 0.349932 tig0019464:+20172 Msa1373820:CDS
CAATCAAATTCGGGATTCAT+TGG 0.355291 tig0019464:+17919 Msa1373820:CDS
GTCTAAGTCTCTATTTATAA+AGG 0.366560 tig0019464:+20026 Msa1373820:CDS
CACTTTACTACAATCCAGTT+TGG 0.373270 tig0019464:+20205 Msa1373820:CDS
CATCACTCCGATATTCCTTT+GGG 0.374851 tig0019464:+21107 Msa1373820:three_prime_UTR
ATCCATCATATGTGAAGAAA+AGG 0.375973 tig0019464:+18172 Msa1373820:CDS
TGGAATCTCTCCCTTGTTCA+AGG 0.380178 tig0019464:-18899 None:intergenic
AGTTCTCAAGCTTCCTTCAA+TGG 0.384884 tig0019464:+19763 Msa1373820:CDS
GTAATTGGACCGTACCGTTC+CGG 0.394679 tig0019464:+16423 Msa1373820:five_prime_UTR
GAAGCTTGAAGATATCCTTC+TGG 0.396937 tig0019464:-19018 None:intergenic
CCGTCAATTTCCAAATCTAT+AGG 0.403247 tig0019464:-16773 None:intergenic
ACTGTAAAGTAATAATTCAT+TGG 0.414181 tig0019464:-21286 None:intergenic
GGAACGGAGGTTGTTGTTGT+TGG 0.414821 tig0019464:-14344 None:intergenic
CAGAAGGATTTGAAAGCATT+GGG 0.417042 tig0019464:+16825 Msa1373820:five_prime_UTR
TTTGCCACTTATAGTTATGA+TGG 0.420136 tig0019464:+14393 Msa1373820:five_prime_UTR
GTGCGAAGGTAAACCTTGTT+TGG 0.421349 tig0019464:-14191 None:intergenic
GCAACTATAAAATGCCAAAC+TGG 0.427089 tig0019464:-20219 None:intergenic
TCCACAAGAGAACCTGTTGA+TGG 0.427990 tig0019464:-18919 None:intergenic
TTTCTCCCTCGTCACGGTTG+TGG 0.429616 tig0019464:+20083 Msa1373820:CDS
TACAAGGAAAATCTCTAAAT+GGG 0.432658 tig0019464:+18241 Msa1373820:CDS
TCATCAGATCAATCAAATTC+GGG 0.435878 tig0019464:+17910 Msa1373820:intron
AAATGAACTTTATAATAAAC+CGG 0.436465 tig0019464:-20110 None:intergenic
ACAGAAGGATTTGAAAGCAT+TGG 0.437082 tig0019464:+16824 Msa1373820:five_prime_UTR
TATCGGAGTGATGAACAAAA+TGG 0.438346 tig0019464:-21097 None:intergenic
TTGAACCTGCCAAGCTCTTG+TGG 0.441248 tig0019464:+17466 Msa1373820:CDS
GACAAAGCTTTGTGACTTGA+AGG 0.448277 tig0019464:+18137 Msa1373820:CDS
AGGAGACAGAAATATTGATA+TGG 0.448597 tig0019464:+17803 Msa1373820:intron
CCCATTGTCGAACCTGATCC+TGG 0.459576 tig0019464:+15669 Msa1373820:five_prime_UTR
TCGTCACGGTTGTGGTTGGC+CGG 0.460211 tig0019464:+20091 Msa1373820:CDS
TGTGTGCTTGCAACAGAACT+AGG 0.461742 tig0019464:-21175 None:intergenic
AAGCTCGCCCAAAGGAATAT+CGG 0.466643 tig0019464:-21114 None:intergenic
GTTTGTTTCCTTCCTGAAGC+AGG 0.468484 tig0019464:+18269 Msa1373820:CDS
ATAAGCCACAAGAGCTTGGC+AGG 0.474426 tig0019464:-17471 None:intergenic
CTTACTGCCACAGATGCAAT+GGG 0.475076 tig0019464:-15750 None:intergenic
TTATGATGACTAACCGTCTC+AGG 0.475662 tig0019464:-17010 None:intergenic
GTCCATCATGTCCTCGCAAT+CGG 0.478174 tig0019464:-19732 None:intergenic
AGTCACAAAGCTTTGTCCGC+TGG 0.480181 tig0019464:-18131 None:intergenic
CCAGGATCAGGTTCGACAAT+GGG 0.480240 tig0019464:-15669 None:intergenic
AAGGGAGAGATTCCATCAAC+AGG 0.484642 tig0019464:+18907 Msa1373820:CDS
CCTATAGATTTGGAAATTGA+CGG 0.485037 tig0019464:+16773 Msa1373820:five_prime_UTR
AGGTTGTTGTTGTTGGTTGA+AGG 0.492203 tig0019464:-14337 None:intergenic
TTACTTACCTGTCAAGATCA+AGG 0.494526 tig0019464:-20272 None:intergenic
AAAACTTATGATGATTCAGT+TGG 0.497813 tig0019464:+21072 Msa1373820:exon
TCGTCTATCACAGGAAGGCT+TGG 0.499537 tig0019464:+15704 Msa1373820:five_prime_UTR
TAAGAAGTCAGTCACGCAAC+TGG 0.499993 tig0019464:+19107 Msa1373820:CDS
TCCCTCGTCACGGTTGTGGT+TGG 0.503251 tig0019464:+20087 Msa1373820:CDS
TAAGTTATACAGTGAAAAGA+TGG 0.504761 tig0019464:+18975 Msa1373820:CDS
CATCTCCCACACAGCTTCTG+TGG 0.505192 tig0019464:+21227 Msa1373820:three_prime_UTR
GAGTCTTCATTTGTTCTAAG+AGG 0.506255 tig0019464:+21445 Msa1373820:three_prime_UTR
GCCCAGTCCTTGATCTTGAC+AGG 0.508041 tig0019464:+20265 Msa1373820:CDS
TTCGATCCTTGTCCGTGCGA+AGG 0.508281 tig0019464:-14205 None:intergenic
ATGCGTGACACGAAAACAAA+AGG 0.511208 tig0019464:+16630 Msa1373820:five_prime_UTR
ATACTTGAAGCCTTGAACAA+GGG 0.513345 tig0019464:+18889 Msa1373820:CDS
TGAAGATATCCTTCTGGAAG+AGG 0.514011 tig0019464:-19012 None:intergenic
GTTGGAGAGAGAAAGAAAAG+AGG 0.518759 tig0019464:-14439 None:intergenic
AGCTTTGTGACTTGAAGGAT+GGG 0.521130 tig0019464:+18142 Msa1373820:CDS
AAGCTTTGTGACTTGAAGGA+TGG 0.521331 tig0019464:+18141 Msa1373820:CDS
CAAGCACACAAAGTGTCAAA+TGG 0.522477 tig0019464:+21188 Msa1373820:three_prime_UTR
TCTATCACAGGAAGGCTTGG+AGG 0.522783 tig0019464:+15707 Msa1373820:five_prime_UTR
TGCAGATGGGCTATCCCACT+TGG 0.526646 tig0019464:+20936 Msa1373820:intron
AGGGAAATCAGTGCAACAAA+TGG 0.528159 tig0019464:+17660 Msa1373820:CDS
CTTCATTTGTTCTAAGAGGA+GGG 0.529334 tig0019464:+21449 Msa1373820:three_prime_UTR
TCAATGGCAAAATTTAATGC+AGG 0.530565 tig0019464:+19779 Msa1373820:CDS
TGAATTGAATTTACTGAACA+AGG 0.530929 tig0019464:-14284 None:intergenic
GGTGGCTTTCTCCCTCGTCA+CGG 0.533465 tig0019464:+20077 Msa1373820:CDS
AGCAAACTACGAGGGACGTA+TGG 0.536139 tig0019464:+19853 Msa1373820:CDS
GTGTCCATCATAACTATAAG+TGG 0.536238 tig0019464:-14397 None:intergenic
CGTCACCTCTAGCCATGTCA+TGG 0.537341 tig0019464:-19041 None:intergenic
ACTTACTGCCACAGATGCAA+TGG 0.537826 tig0019464:-15751 None:intergenic
TCTTCATTTGTTCTAAGAGG+AGG 0.539985 tig0019464:+21448 Msa1373820:three_prime_UTR
CAGGTTCAAATGCAACATCC+TGG 0.541309 tig0019464:-17452 None:intergenic
ATGGTTTCAGAAGAAACAGT+TGG 0.542034 tig0019464:-14457 None:intergenic
GATACTTGAAGCCTTGAACA+AGG 0.544169 tig0019464:+18888 Msa1373820:intron
AACAAACCCCATTGCATCTG+TGG 0.545406 tig0019464:+15743 Msa1373820:five_prime_UTR
TTGGATAAGCCACAAGAGCT+TGG 0.550397 tig0019464:-17475 None:intergenic
TTTCTAACATTGGCCAAACA+AGG 0.553880 tig0019464:+14178 Msa1373820:five_prime_UTR
AGCTTTGTCCGCTGGAGATG+TGG 0.557191 tig0019464:-18123 None:intergenic
ATCCGTCCAAAGATTGTACA+AGG 0.558214 tig0019464:+18225 Msa1373820:CDS
ACTGGATGAAGAAATAGATA+AGG 0.558410 tig0019464:+19125 Msa1373820:CDS
TCCATCATATGTGAAGAAAA+GGG 0.560512 tig0019464:+18173 Msa1373820:CDS
TCCATCAACAGGTTCTCTTG+TGG 0.561510 tig0019464:+18918 Msa1373820:CDS
GAAGCTTGAGAACTTGAAGC+TGG 0.561670 tig0019464:-19754 None:intergenic
TTCCTTGTACAATCTTTGGA+CGG 0.563359 tig0019464:-18227 None:intergenic
AGAACTAGGTAGGTGCATGC+AGG 0.569739 tig0019464:-21161 None:intergenic
TACCTGTCAAGATCAAGGAC+TGG 0.569959 tig0019464:-20267 None:intergenic
TACAAAACTTCGTCTATCAC+AGG 0.570289 tig0019464:+15695 Msa1373820:five_prime_UTR
GAAATCAGTGCAACAAATGG+TGG 0.572848 tig0019464:+17663 Msa1373820:CDS
CACTTGCAATGTCCGTGTGT+TGG 0.574543 tig0019464:+17317 Msa1373820:exon
AAAGATATTATTACACCAAG+TGG 0.576063 tig0019464:-20951 None:intergenic
CAGTGAAAAGATGGCCACAT+TGG 0.576184 tig0019464:+18984 Msa1373820:CDS
GTTGAAACAAGACAACATCA+TGG 0.576533 tig0019464:-14251 None:intergenic
TCAAGCCACAGAAGCTGTGT+GGG 0.579053 tig0019464:-21232 None:intergenic
GGTTTACCTTCGCACGGACA+AGG 0.580176 tig0019464:+14199 Msa1373820:five_prime_UTR
AAAGACTTTCCGGAACGGTA+CGG 0.581971 tig0019464:-16432 None:intergenic
ACATACTTGTGGTAAGCTAA+AGG 0.582503 tig0019464:-17966 None:intergenic
CACCGATTGCGAGGACATGA+TGG 0.588869 tig0019464:+19730 Msa1373820:CDS
TATCTATAATCTGCCTGAGA+CGG 0.594970 tig0019464:+16997 Msa1373820:five_prime_UTR
AAGATATTATTACACCAAGT+GGG 0.595317 tig0019464:-20950 None:intergenic
GCCAACCACAACCGTGACGA+GGG 0.595392 tig0019464:-20088 None:intergenic
AGTCGAATGTATATGATGAT+CGG 0.595943 tig0019464:+16849 Msa1373820:five_prime_UTR
GGCCAACCACAACCGTGACG+AGG 0.597641 tig0019464:-20089 None:intergenic
GTCGTGTATTGACATGTAGA+CGG 0.597739 tig0019464:+21368 Msa1373820:three_prime_UTR
TTGCTGATCGAATGCTTGCA+TGG 0.600379 tig0019464:-19064 None:intergenic
TATTATGGGTGACAATAGTA+CGG 0.600421 tig0019464:+17943 Msa1373820:CDS
TTTGATATCTGAAAATCGAA+AGG 0.602266 tig0019464:-14365 None:intergenic
ACCAGGATCAGGTTCGACAA+TGG 0.602966 tig0019464:-15670 None:intergenic
ATCAAGCCACAGAAGCTGTG+TGG 0.603181 tig0019464:-21233 None:intergenic
TCGTGTATTGACATGTAGAC+GGG 0.604243 tig0019464:+21369 Msa1373820:three_prime_UTR
TCTTCAAGCTTCCCATGACA+TGG 0.604681 tig0019464:+19029 Msa1373820:CDS
AAACAAGGTTTACCTTCGCA+CGG 0.606024 tig0019464:+14193 Msa1373820:five_prime_UTR
GTCACCTCTAGCCATGTCAT+GGG 0.607351 tig0019464:-19040 None:intergenic
TAAATCTTCAAAGCTTTGTG+AGG 0.609297 tig0019464:+19700 Msa1373820:CDS
AGTGTCAAATGGTGATCAGA+GGG 0.609348 tig0019464:+21199 Msa1373820:three_prime_UTR
ACCTGTCAAGATCAAGGACT+GGG 0.612834 tig0019464:-20266 None:intergenic
ACCAAGTACCTGCTTCAGGA+AGG 0.616523 tig0019464:-18277 None:intergenic
AAGTGTCAAATGGTGATCAG+AGG 0.619570 tig0019464:+21198 Msa1373820:three_prime_UTR
TTATAAAGGAGTACAACCAC+AGG 0.623382 tig0019464:+20040 Msa1373820:CDS
GCTTCCCATGACATGGCTAG+AGG 0.624847 tig0019464:+19036 Msa1373820:CDS
CTACGAGGGACGTATGGCAA+AGG 0.627470 tig0019464:+19859 Msa1373820:CDS
GGCACTGTACACCGATTGCG+AGG 0.628615 tig0019464:+19721 Msa1373820:CDS
GCTTTGTGACTTGAAGGATG+GGG 0.644739 tig0019464:+18143 Msa1373820:CDS
CTGAAAATCGAAAGGAACGG+AGG 0.648245 tig0019464:-14357 None:intergenic
CTGACTTCTTAGCATGGTGA+CGG 0.653596 tig0019464:-19095 None:intergenic
TGGAAGAGGTAGAGCCAATG+TGG 0.653977 tig0019464:-18998 None:intergenic
AAACTTCGTCTATCACAGGA+AGG 0.654561 tig0019464:+15699 Msa1373820:five_prime_UTR
TGACCAAAACAACCTTGTGT+AGG 0.656892 tig0019464:-20175 None:intergenic
CTTCACTCTATTCCAACACA+CGG 0.659292 tig0019464:-17329 None:intergenic
GCGTGACTGACTTCTTAGCA+TGG 0.660593 tig0019464:-19101 None:intergenic
TTGGCTCTACCTCTTCCAGA+AGG 0.665756 tig0019464:+19003 Msa1373820:CDS
ATAACTATAAGTGGCAAATG+CGG 0.668267 tig0019464:-14388 None:intergenic
CATACAGGAATATGGATTTG+GGG 0.676634 tig0019464:+16746 Msa1373820:intron
ACCTTCAAAAGCAAACTACG+AGG 0.688387 tig0019464:+19844 Msa1373820:CDS
TCAAACAGCCACATCTCCAG+CGG 0.692057 tig0019464:+18115 Msa1373820:intron
ACTTACGCAGAAAATCACGT+TGG 0.700511 tig0019464:-17494 None:intergenic
AAGCACAGAACTTATTACAG+TGG 0.700561 tig0019464:-16975 None:intergenic
CCTTCAAAAGCAAACTACGA+GGG 0.700718 tig0019464:+19845 Msa1373820:CDS
GTAAAATCAACATGATACTG+TGG 0.700820 tig0019464:-21264 None:intergenic
CGTGTGTTGGAATAGAGTGA+AGG 0.701201 tig0019464:+17330 Msa1373820:CDS
TATCTGAAAATCGAAAGGAA+CGG 0.702519 tig0019464:-14360 None:intergenic
TATTTCTGGAGACCTACACA+AGG 0.706921 tig0019464:+20163 Msa1373820:CDS
CCAACCAATTGAAAAGCCTG+TGG 0.707705 tig0019464:-20056 None:intergenic
TACATGTCAATACACGACAG+TGG 0.727087 tig0019464:-21363 None:intergenic
TGCTTGCAACAGAACTAGGT+AGG 0.736436 tig0019464:-21171 None:intergenic
TTACTGCCACAGATGCAATG+GGG 0.746702 tig0019464:-15749 None:intergenic
AAAAGAAACATGGATCACGG+TGG 0.783518 tig0019464:+21003 Msa1373820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAAAATTCAATTTTTATG+AGG + tig0019464:14721-14740 Msa1373820:intron 10.0%
!!! TAGAAGTCAATTTTATTTTT+GGG + tig0019464:15119-15138 Msa1373820:intron 15.0%
!! TAAGAAACATAAAAAAAAGT+TGG - tig0019464:15533-15552 None:intergenic 15.0%
!!! TTAGCTAAAATTTTTATGAA+TGG + tig0019464:16242-16261 Msa1373820:intron 15.0%
!! GTAATATTATTACTGATAAT+TGG - tig0019464:17854-17873 None:intergenic 15.0%
!!! ATTATGCTACATTTTATATA+AGG - tig0019464:18542-18561 None:intergenic 15.0%
!!! AATGTAGCATAATTTTTTTA+AGG + tig0019464:18549-18568 Msa1373820:intron 15.0%
!!! TCAAATATGTTATATAGTTT+TGG + tig0019464:19263-19282 Msa1373820:intron 15.0%
!!! TTTAAAGCTTATATTTACTA+TGG + tig0019464:19611-19630 Msa1373820:intron 15.0%
!! TTAAAGCTTATATTTACTAT+GGG + tig0019464:19612-19631 Msa1373820:intron 15.0%
!! AAATGAACTTTATAATAAAC+CGG - tig0019464:20113-20132 None:intergenic 15.0%
!!! ATCAAACTAACAATATTTTA+TGG + tig0019464:20874-20893 Msa1373820:intron 15.0%
!!! TATCTTTTTTCATTCTATAT+TGG + tig0019464:20967-20986 Msa1373820:CDS 15.0%
!! GTAACAAAAAAAAAAAAAAG+AGG + tig0019464:21479-21498 Msa1373820:three_prime_UTR 15.0%
!! AAAGAGATAAAAGAAACTTA+CGG - tig0019464:14499-14518 None:intergenic 20.0%
!!! TTGTTAAAGTTAAAACCTTT+TGG + tig0019464:14624-14643 Msa1373820:intron 20.0%
!!! TTCAATTTTTATGAGGTTAA+CGG + tig0019464:14728-14747 Msa1373820:intron 20.0%
!! ACTAAGTAATCTTCATTAAT+TGG - tig0019464:14914-14933 None:intergenic 20.0%
!!! GTAGAAGTCAATTTTATTTT+TGG + tig0019464:15118-15137 Msa1373820:intron 20.0%
!!! TTTTATTTTTGGGTCAATTA+TGG + tig0019464:15129-15148 Msa1373820:intron 20.0%
!!! CATTTTGTTTATATTATGGA+GGG - tig0019464:15295-15314 None:intergenic 20.0%
!! CTCCATAATATAAACAAAAT+GGG + tig0019464:15294-15313 Msa1373820:intron 20.0%
!!! TTCCCATTTTGTTTATATTA+TGG - tig0019464:15299-15318 None:intergenic 20.0%
!! TGGTGATAAATTGTTAATTT+AGG + tig0019464:15391-15410 Msa1373820:intron 20.0%
!! TGATAAATTGTTAATTTAGG+TGG + tig0019464:15394-15413 Msa1373820:intron 20.0%
!! GTTTGAATTTAGAAAACAAA+AGG - tig0019464:15796-15815 None:intergenic 20.0%
!! GAAATAATGACTTATCTAAA+TGG - tig0019464:15914-15933 None:intergenic 20.0%
!!! AAGAAAATAATAGTTTGCAT+TGG - tig0019464:16130-16149 None:intergenic 20.0%
!!! CATAAAAATTTTAGCTAATG+AGG - tig0019464:16240-16259 None:intergenic 20.0%
!!! TTTCTACTTTTATCACTTTA+TGG + tig0019464:16361-16380 Msa1373820:intron 20.0%
!!! TTGTTACTACTTTTTTTATC+AGG + tig0019464:16401-16420 Msa1373820:intron 20.0%
!!! TACTTTTTTTATCAGGTAAT+TGG + tig0019464:16408-16427 Msa1373820:intron 20.0%
!!! CTAACATATTTGTTTTCTTA+GGG + tig0019464:16592-16611 Msa1373820:intron 20.0%
!!! TTATCATTTTTCTCTTTGTT+AGG + tig0019464:16663-16682 Msa1373820:intron 20.0%
!! ACATCAAATTAACAACAAAA+AGG - tig0019464:17405-17424 None:intergenic 20.0%
!!! CAATGCTTATAAAGTTATTT+TGG + tig0019464:17542-17561 Msa1373820:intron 20.0%
!!! AAAAAATTGCTTTAGAAAAC+AGG - tig0019464:17757-17776 None:intergenic 20.0%
!! CAGTAATAATATTACTAGTT+TGG + tig0019464:17859-17878 Msa1373820:intron 20.0%
!!! TTTTATTAAAAACACTGCTT+TGG + tig0019464:18064-18083 Msa1373820:intron 20.0%
!!! AATATTTTGTTTGATTGAGA+GGG - tig0019464:18663-18682 None:intergenic 20.0%
!!! AAATATTTTGTTTGATTGAG+AGG - tig0019464:18664-18683 None:intergenic 20.0%
!! TCATCAGAAAACATTAAAAA+TGG - tig0019464:18769-18788 None:intergenic 20.0%
!!! TAAAAGATAAAGCTGTTTTA+TGG - tig0019464:18855-18874 None:intergenic 20.0%
!!! CATATTCATTTGTTACATTA+AGG - tig0019464:19992-20011 None:intergenic 20.0%
!!! AAGTTCATTTTGATTGAAAT+TGG + tig0019464:20123-20142 Msa1373820:CDS 20.0%
!!! ATGGTTACTTTTTATATTTC+TGG + tig0019464:20149-20168 Msa1373820:CDS 20.0%
!!! TTTAAGATCCATTATATTGT+AGG + tig0019464:20358-20377 Msa1373820:intron 20.0%
!! TGTTTGATTCATAAAAACTA+TGG + tig0019464:20727-20746 Msa1373820:intron 20.0%
!!! TTTTTATTGAAATTGCAGAT+GGG + tig0019464:20923-20942 Msa1373820:intron 20.0%
!!! TTTTTATTGCTGCTATATAA+TGG - tig0019464:21035-21054 None:intergenic 20.0%
!! ACTGTAAAGTAATAATTCAT+TGG - tig0019464:21289-21308 None:intergenic 20.0%
!! ACAAAAAAAAAAAAAAGAGG+TGG + tig0019464:21482-21501 Msa1373820:three_prime_UTR 20.0%
!! CAAAAAAAAAAAAAAGAGGT+GGG + tig0019464:21483-21502 Msa1373820:three_prime_UTR 20.0%
! TGAATTGAATTTACTGAACA+AGG - tig0019464:14287-14306 None:intergenic 25.0%
! TTTGATATCTGAAAATCGAA+AGG - tig0019464:14368-14387 None:intergenic 25.0%
! AAAGAATGAAAGATTGTGTA+AGG - tig0019464:14596-14615 None:intergenic 25.0%
! ATGTATGGATGGTAAATAAA+TGG + tig0019464:14823-14842 Msa1373820:intron 25.0%
! AAGATTACTTAGTGTATGTT+TGG + tig0019464:14921-14940 Msa1373820:intron 25.0%
!! ACTCTTGAGTTTTTCTTTTT+TGG + tig0019464:15088-15107 Msa1373820:intron 25.0%
! TAAGAATAGAAGATATTGTG+AGG + tig0019464:15175-15194 Msa1373820:intron 25.0%
!!! CCATTTTGTTTATATTATGG+AGG - tig0019464:15296-15315 None:intergenic 25.0%
! CCTCCATAATATAAACAAAA+TGG + tig0019464:15293-15312 Msa1373820:intron 25.0%
! ATGTTGCCAATTCAATAATT+TGG + tig0019464:15456-15475 Msa1373820:intron 25.0%
! TGTTGCCAATTCAATAATTT+GGG + tig0019464:15457-15476 Msa1373820:intron 25.0%
! GATATGACAAAACAATAACA+AGG - tig0019464:15565-15584 None:intergenic 25.0%
! CATAACTAACAAAAGAAGTT+TGG - tig0019464:15606-15625 None:intergenic 25.0%
! AAATCTGTACACACAAAAAT+TGG - tig0019464:15649-15668 None:intergenic 25.0%
!! ACTTGAAAGTTGATTTAACT+TGG + tig0019464:16003-16022 Msa1373820:intron 25.0%
! ACAGCAGATACTATATAAAT+AGG + tig0019464:16047-16066 Msa1373820:intron 25.0%
! ATTAAGCAAAAAAGACTTTC+CGG - tig0019464:16445-16464 None:intergenic 25.0%
!!! GCTAACATATTTGTTTTCTT+AGG + tig0019464:16591-16610 Msa1373820:intron 25.0%
!!! ATATTTGTTTTCTTAGGGTT+TGG + tig0019464:16597-16616 Msa1373820:intron 25.0%
!!! GAGCTCGTTTTAAATTTTTT+AGG + tig0019464:17045-17064 Msa1373820:intron 25.0%
!!! GAGAATAAAACATTTTAGCA+TGG - tig0019464:17071-17090 None:intergenic 25.0%
!!! TCTGCTTTGTAACATTTTTT+TGG + tig0019464:17244-17263 Msa1373820:five_prime_UTR 25.0%
!!! CTGCTTTGTAACATTTTTTT+GGG + tig0019464:17245-17264 Msa1373820:five_prime_UTR 25.0%
!!! TTGATGTATTTTTCAATTGC+TGG + tig0019464:17418-17437 Msa1373820:intron 25.0%
!! GATACTGACTATCTTTATTA+GGG - tig0019464:17708-17727 None:intergenic 25.0%
!! TGATACTGACTATCTTTATT+AGG - tig0019464:17709-17728 None:intergenic 25.0%
! ATCATCAGATCAATCAAATT+CGG + tig0019464:17909-17928 Msa1373820:intron 25.0%
! TACAAGGAAAATCTCTAAAT+GGG + tig0019464:18241-18260 Msa1373820:CDS 25.0%
!! GTTTTTCATGTTCTCTTTAA+TGG + tig0019464:18298-18317 Msa1373820:intron 25.0%
! CTTTAAGTAATAGTCTATGA+AGG + tig0019464:18404-18423 Msa1373820:intron 25.0%
! GAAAACATTAAAAATGGCAA+AGG - tig0019464:18763-18782 None:intergenic 25.0%
! TAAGTTATACAGTGAAAAGA+TGG + tig0019464:18975-18994 Msa1373820:CDS 25.0%
! GAAAAGAAAATAGGCTTATT+GGG + tig0019464:19186-19205 Msa1373820:intron 25.0%
! TTATTGGGAATTTAATTAGC+TGG + tig0019464:19201-19220 Msa1373820:intron 25.0%
! TTAAAGGATATTAAGCATCT+TGG - tig0019464:19512-19531 None:intergenic 25.0%
! ATATATCATCCAATCAAATG+CGG - tig0019464:19542-19561 None:intergenic 25.0%
! GGAAAAATCATATTTACTTG+AGG + tig0019464:19633-19652 Msa1373820:intron 25.0%
! GTCTAAGTCTCTATTTATAA+AGG + tig0019464:20026-20045 Msa1373820:CDS 25.0%
!!! TTCATTTTGATTGAAATTGG+AGG + tig0019464:20126-20145 Msa1373820:CDS 25.0%
! TTGAAAGAACGAAAGAAATA+CGG - tig0019464:20299-20318 None:intergenic 25.0%
! TTATCTAGCCTACAATATAA+TGG - tig0019464:20369-20388 None:intergenic 25.0%
! TCATATAAATCGATGTAAAC+AGG - tig0019464:20423-20442 None:intergenic 25.0%
!! TGGTAAATAGTTTTCTTTGT+TGG + tig0019464:20747-20766 Msa1373820:intron 25.0%
!! TAAATAGTTTTCTTTGTTGG+CGG + tig0019464:20750-20769 Msa1373820:intron 25.0%
!! CTTTTTATTGAAATTGCAGA+TGG + tig0019464:20922-20941 Msa1373820:intron 25.0%
! AAGATATTATTACACCAAGT+GGG - tig0019464:20953-20972 None:intergenic 25.0%
! AAAGATATTATTACACCAAG+TGG - tig0019464:20954-20973 None:intergenic 25.0%
!!! CTTTTTTCATTCTATATTGG+CGG + tig0019464:20970-20989 Msa1373820:CDS 25.0%
! AAAACTTATGATGATTCAGT+TGG + tig0019464:21072-21091 Msa1373820:exon 25.0%
!!! AGCTTTTTCATTTTTGTACA+TGG + tig0019464:21132-21151 Msa1373820:three_prime_UTR 25.0%
!!! TGTCACATTTTAGAGTAAAT+TGG + tig0019464:21315-21334 Msa1373820:three_prime_UTR 25.0%
!!! GGAGTTGTTTTTTCTAACAT+TGG + tig0019464:14168-14187 Msa1373820:five_prime_UTR 30.0%
TATCTGAAAATCGAAAGGAA+CGG - tig0019464:14363-14382 None:intergenic 30.0%
ATAACTATAAGTGGCAAATG+CGG - tig0019464:14391-14410 None:intergenic 30.0%
! TTTGCCACTTATAGTTATGA+TGG + tig0019464:14393-14412 Msa1373820:five_prime_UTR 30.0%
!! CGGTTGATGAAAATTGATAA+TGG - tig0019464:14479-14498 None:intergenic 30.0%
ATGGATGGTAAATAAATGGA+TGG + tig0019464:14827-14846 Msa1373820:intron 30.0%
TACTTAGTGTATGTTTGGAT+CGG + tig0019464:14926-14945 Msa1373820:intron 30.0%
TAACTGTTTAACCGTATGTT+TGG - tig0019464:15003-15022 None:intergenic 30.0%
AAACATACGGTTAAACAGTT+AGG + tig0019464:15002-15021 Msa1373820:intron 30.0%
!! TTTTGGGTCAATTATGGAAT+AGG + tig0019464:15135-15154 Msa1373820:intron 30.0%
GTTGCCAATTCAATAATTTG+GGG + tig0019464:15458-15477 Msa1373820:intron 30.0%
!! ATTGTTTTGTCATATCCTCT+TGG + tig0019464:15569-15588 Msa1373820:intron 30.0%
!! TTGTTTTGTCATATCCTCTT+GGG + tig0019464:15570-15589 Msa1373820:intron 30.0%
TCGTAACACTTATTGATGTT+TGG + tig0019464:15835-15854 Msa1373820:intron 30.0%
TAACACTTATTGATGTTTGG+TGG + tig0019464:15838-15857 Msa1373820:intron 30.0%
TACTATATAAATAGGCCTCT+AGG + tig0019464:16055-16074 Msa1373820:intron 30.0%
TACACGATAATATTTCCTAG+AGG - tig0019464:16073-16092 None:intergenic 30.0%
! AGATTTTCTGTCTCATCTTT+AGG - tig0019464:16155-16174 None:intergenic 30.0%
ACAGAAAATCTTTACAAGAG+TGG + tig0019464:16164-16183 Msa1373820:intron 30.0%
CAGAAAATCTTTACAAGAGT+GGG + tig0019464:16165-16184 Msa1373820:intron 30.0%
AGAAAATCTTTACAAGAGTG+GGG + tig0019464:16166-16185 Msa1373820:intron 30.0%
TGTTCCACATTTATCATTCA+TGG + tig0019464:16338-16357 Msa1373820:intron 30.0%
GAAACCATGAATGATAAATG+TGG - tig0019464:16345-16364 None:intergenic 30.0%
ACTTTATGGCTTTCTTAATC+AGG + tig0019464:16375-16394 Msa1373820:intron 30.0%
GTGATAAGAGTAAATTCTAG+TGG - tig0019464:16511-16530 None:intergenic 30.0%
! TCTTATCACATGCAGTTTTT+AGG + tig0019464:16522-16541 Msa1373820:intron 30.0%
CTCATTTAATCATGTCATAC+AGG + tig0019464:16731-16750 Msa1373820:intron 30.0%
AATCATGTCATACAGGAATA+TGG + tig0019464:16738-16757 Msa1373820:intron 30.0%
TCATACAGGAATATGGATTT+GGG + tig0019464:16745-16764 Msa1373820:intron 30.0%
CCTATAGATTTGGAAATTGA+CGG + tig0019464:16773-16792 Msa1373820:five_prime_UTR 30.0%
! GTCTTTTACATTGATACAGA+AGG + tig0019464:16809-16828 Msa1373820:five_prime_UTR 30.0%
AGTCGAATGTATATGATGAT+CGG + tig0019464:16849-16868 Msa1373820:five_prime_UTR 30.0%
CAAAAGGAAAACACAAGAAA+AGG - tig0019464:16938-16957 None:intergenic 30.0%
!!! ACATTTTTTTGGGTAAATCG+TGG + tig0019464:17255-17274 Msa1373820:five_prime_UTR 30.0%
AATAGTTGATTAGATGAACG+AGG - tig0019464:17375-17394 None:intergenic 30.0%
!!! TTTCAATTGCTGGCTTTTAT+AGG + tig0019464:17428-17447 Msa1373820:intron 30.0%
!!! TTCAATTGCTGGCTTTTATA+GGG + tig0019464:17429-17448 Msa1373820:intron 30.0%
! AACTTTATAAGCATTGCATG+AGG - tig0019464:17538-17557 None:intergenic 30.0%
!! GCTCTTTATATTTAACTTGC+AGG + tig0019464:17783-17802 Msa1373820:intron 30.0%
AGGAGACAGAAATATTGATA+TGG + tig0019464:17803-17822 Msa1373820:intron 30.0%
TCATCAGATCAATCAAATTC+GGG + tig0019464:17910-17929 Msa1373820:intron 30.0%
TATTATGGGTGACAATAGTA+CGG + tig0019464:17943-17962 Msa1373820:CDS 30.0%
!! ACTGATTTTTAGAAGACATG+AGG - tig0019464:17997-18016 None:intergenic 30.0%
TAAGAATGAATTCCACGTTA+GGG - tig0019464:18038-18057 None:intergenic 30.0%
ATAAGAATGAATTCCACGTT+AGG - tig0019464:18039-18058 None:intergenic 30.0%
ATTAAAAACACTGCTTTGGT+TGG + tig0019464:18068-18087 Msa1373820:intron 30.0%
GGCTAATTAATCCTTGAAAT+TGG + tig0019464:18089-18108 Msa1373820:intron 30.0%
ATCCATCATATGTGAAGAAA+AGG + tig0019464:18172-18191 Msa1373820:CDS 30.0%
TCCATCATATGTGAAGAAAA+GGG + tig0019464:18173-18192 Msa1373820:CDS 30.0%
! GATTTTCCTTGTACAATCTT+TGG - tig0019464:18234-18253 None:intergenic 30.0%
GTACAAGGAAAATCTCTAAA+TGG + tig0019464:18240-18259 Msa1373820:CDS 30.0%
AACAACAGATATCTCTAACA+TGG - tig0019464:18383-18402 None:intergenic 30.0%
TAAGGAGATACAAAGTAAGT+TGG + tig0019464:18567-18586 Msa1373820:intron 30.0%
AGGAGATAACTCTCTTAATT+TGG - tig0019464:18633-18652 None:intergenic 30.0%
AGAGAAAACATACTGCATAA+GGG - tig0019464:18729-18748 None:intergenic 30.0%
AAATGGCAAAGGACTAAATT+GGG - tig0019464:18752-18771 None:intergenic 30.0%
AAAATGGCAAAGGACTAAAT+TGG - tig0019464:18753-18772 None:intergenic 30.0%
ACTGGATGAAGAAATAGATA+AGG + tig0019464:19125-19144 Msa1373820:CDS 30.0%
GGAAAAGAAAATAGGCTTAT+TGG + tig0019464:19185-19204 Msa1373820:intron 30.0%
CAAATGCGGCTAAAATTTAA+AGG - tig0019464:19528-19547 None:intergenic 30.0%
!! AAATTTTAGCCGCATTTGAT+TGG + tig0019464:19530-19549 Msa1373820:intron 30.0%
!!! CTCTATTTTGATCTTGGAAT+TGG + tig0019464:19578-19597 Msa1373820:intron 30.0%
TTACTTGAGGATAATTATGC+AGG + tig0019464:19646-19665 Msa1373820:intron 30.0%
! TAAATCTTCAAAGCTTTGTG+AGG + tig0019464:19700-19719 Msa1373820:CDS 30.0%
! GCATTAAATTTTGCCATTGA+AGG - tig0019464:19779-19798 None:intergenic 30.0%
TCAATGGCAAAATTTAATGC+AGG + tig0019464:19779-19798 Msa1373820:CDS 30.0%
ATGTTAAGCATATGAAACAG+TGG - tig0019464:19968-19987 None:intergenic 30.0%
ACAAATGAATATGCAGATGT+TGG + tig0019464:19999-20018 Msa1373820:intron 30.0%
!! TTTTGATTGAAATTGGAGGA+TGG + tig0019464:20130-20149 Msa1373820:CDS 30.0%
ATAAACACTTGTGAGATTGT+TGG + tig0019464:20457-20476 Msa1373820:intron 30.0%
TAAACACTTGTGAGATTGTT+GGG + tig0019464:20458-20477 Msa1373820:intron 30.0%
CTTGGAGAGCTTATAAAAAT+AGG - tig0019464:20531-20550 None:intergenic 30.0%
! TTTTATAAGCTCTCCAAGAT+TGG + tig0019464:20533-20552 Msa1373820:intron 30.0%
!! GTTGTTTTCATAACCAATCT+TGG - tig0019464:20549-20568 None:intergenic 30.0%
TTCTTTGTCGTACTTTAAGT+TGG + tig0019464:20680-20699 Msa1373820:intron 30.0%
! TCTTTGTCGTACTTTAAGTT+GGG + tig0019464:20681-20700 Msa1373820:intron 30.0%
! AAATAGTTTTCTTTGTTGGC+GGG + tig0019464:20751-20770 Msa1373820:intron 30.0%
! TTCCATTTTCTCTTAAGCAA+TGG + tig0019464:20826-20845 Msa1373820:intron 30.0%
TGTTATGGGAAAAAGAAACA+TGG + tig0019464:20993-21012 Msa1373820:CDS 30.0%
!! CATAAGTTTTAGTCTGTTCT+TGG - tig0019464:21062-21081 None:intergenic 30.0%
GTAAAATCAACATGATACTG+TGG - tig0019464:21267-21286 None:intergenic 30.0%
TTTCTAACATTGGCCAAACA+AGG + tig0019464:14178-14197 Msa1373820:five_prime_UTR 35.0%
GTTGAAACAAGACAACATCA+TGG - tig0019464:14254-14273 None:intergenic 35.0%
GTGTCCATCATAACTATAAG+TGG - tig0019464:14400-14419 None:intergenic 35.0%
ATGGTTTCAGAAGAAACAGT+TGG - tig0019464:14460-14479 None:intergenic 35.0%
!! GTTTGTTTGTTTCTGAGATC+TGG + tig0019464:14546-14565 Msa1373820:intron 35.0%
! AACCTTTTGGATCCTTTCTT+TGG + tig0019464:14637-14656 Msa1373820:intron 35.0%
AATTACCCAACTCCAAAGAA+AGG - tig0019464:14652-14671 None:intergenic 35.0%
!! TTTCTTTGGAGTTGGGTAAT+TGG + tig0019464:14651-14670 Msa1373820:intron 35.0%
!! TTCTTTGGAGTTGGGTAATT+GGG + tig0019464:14652-14671 Msa1373820:intron 35.0%
ATTCAAGCTAGCTCATGATT+TGG - tig0019464:14785-14804 None:intergenic 35.0%
! ATGAGCTAGCTTGAATTTAG+TGG + tig0019464:14789-14808 Msa1373820:intron 35.0%
! ATCGTTTGCTAATGTATGGA+TGG + tig0019464:14812-14831 Msa1373820:intron 35.0%
GATGGTAAATAAATGGATGG+TGG + tig0019464:14830-14849 Msa1373820:intron 35.0%
!!! TTAGGTTTTTAGTTGCCATC+TGG + tig0019464:15020-15039 Msa1373820:intron 35.0%
CAATATACTACAACTCCAGA+TGG - tig0019464:15038-15057 None:intergenic 35.0%
GTCAATTATGGAATAGGAGT+TGG + tig0019464:15141-15160 Msa1373820:intron 35.0%
CATGTACAAGAATAGAGTTG+CGG + tig0019464:15201-15220 Msa1373820:intron 35.0%
! TCTCAAGTTGTACATAGATG+TGG + tig0019464:15371-15390 Msa1373820:intron 35.0%
TGATAACAAAGAAAGAGTCC+CGG - tig0019464:15484-15503 None:intergenic 35.0%
GTACACACAAAAATTGGACA+AGG - tig0019464:15643-15662 None:intergenic 35.0%
TACAAAACTTCGTCTATCAC+AGG + tig0019464:15695-15714 Msa1373820:five_prime_UTR 35.0%
CTAATGAGGATCATCAACAT+TGG - tig0019464:16226-16245 None:intergenic 35.0%
TTCACTGTGATTCAAAGTGA+CGG + tig0019464:16285-16304 Msa1373820:intron 35.0%
! CTCTCTCTTTCTTGTTATGA+AGG + tig0019464:16471-16490 Msa1373820:five_prime_UTR 35.0%
TTCTCTTTGTTAGGCTTAGT+TGG + tig0019464:16672-16691 Msa1373820:intron 35.0%
GTCATACAGGAATATGGATT+TGG + tig0019464:16744-16763 Msa1373820:intron 35.0%
CATACAGGAATATGGATTTG+GGG + tig0019464:16746-16765 Msa1373820:intron 35.0%
CCGTCAATTTCCAAATCTAT+AGG - tig0019464:16776-16795 None:intergenic 35.0%
! ACAGAAGGATTTGAAAGCAT+TGG + tig0019464:16824-16843 Msa1373820:five_prime_UTR 35.0%
!! CAGAAGGATTTGAAAGCATT+GGG + tig0019464:16825-16844 Msa1373820:five_prime_UTR 35.0%
! TTCTTGTGTTTTCCTTTTGC+AGG + tig0019464:16939-16958 Msa1373820:intron 35.0%
AAGCACAGAACTTATTACAG+TGG - tig0019464:16978-16997 None:intergenic 35.0%
TATCTATAATCTGCCTGAGA+CGG + tig0019464:16997-17016 Msa1373820:five_prime_UTR 35.0%
TAAAACGAGCTCATTTCTGA+GGG - tig0019464:17037-17056 None:intergenic 35.0%
TTAAAACGAGCTCATTTCTG+AGG - tig0019464:17038-17057 None:intergenic 35.0%
! TCGCTGAAGAATTTTATGGA+AGG + tig0019464:17145-17164 Msa1373820:five_prime_UTR 35.0%
TTTGGTCACTGCTGAATAAT+TGG + tig0019464:17560-17579 Msa1373820:intron 35.0%
TTGGTCACTGCTGAATAATT+GGG + tig0019464:17561-17580 Msa1373820:intron 35.0%
ATCCAATAGAGTTGACATGA+TGG - tig0019464:17612-17631 None:intergenic 35.0%
TTTCCTTAATATCCTGCAGA+AGG + tig0019464:17640-17659 Msa1373820:intron 35.0%
TTCCTTAATATCCTGCAGAA+GGG + tig0019464:17641-17660 Msa1373820:intron 35.0%
TGATATGGTATAGTCTCTTC+TGG + tig0019464:17818-17837 Msa1373820:intron 35.0%
CAATCAAATTCGGGATTCAT+TGG + tig0019464:17919-17938 Msa1373820:CDS 35.0%
ACATACTTGTGGTAAGCTAA+AGG - tig0019464:17969-17988 None:intergenic 35.0%
! CTGTTTGAAGTCCAATTTCA+AGG - tig0019464:18103-18122 None:intergenic 35.0%
! TCCCTTTTCTTCACATATGA+TGG - tig0019464:18177-18196 None:intergenic 35.0%
TTCCTTGTACAATCTTTGGA+CGG - tig0019464:18230-18249 None:intergenic 35.0%
GAGATGCTAATAGAGAGAAA+GGG - tig0019464:18593-18612 None:intergenic 35.0%
AGAGATGCTAATAGAGAGAA+AGG - tig0019464:18594-18613 None:intergenic 35.0%
!! TTTTGTTTGATTGAGAGGGA+GGG - tig0019464:18659-18678 None:intergenic 35.0%
!! ATTTTGTTTGATTGAGAGGG+AGG - tig0019464:18660-18679 None:intergenic 35.0%
! TAAGGGTTTGTTTGGTTCAA+AGG - tig0019464:18712-18731 None:intergenic 35.0%
! ATACTGCATAAGGGTTTGTT+TGG - tig0019464:18720-18739 None:intergenic 35.0%
GAGAGAAAACATACTGCATA+AGG - tig0019464:18730-18749 None:intergenic 35.0%
ATACTTGAAGCCTTGAACAA+GGG + tig0019464:18889-18908 Msa1373820:CDS 35.0%
! TCTTGTGGAGATTTTCAACA+AGG + tig0019464:18933-18952 Msa1373820:CDS 35.0%
GTGATTCATAAGTCCTTCAT+AGG - tig0019464:19416-19435 None:intergenic 35.0%
!!! AGTCTGCTCTATTTTGATCT+TGG + tig0019464:19572-19591 Msa1373820:intron 35.0%
! ACTTTTGAGCATGATTGTGT+TGG + tig0019464:19821-19840 Msa1373820:CDS 35.0%
TATGAAACAGTGGCAAATCA+AGG - tig0019464:19958-19977 None:intergenic 35.0%
! TTATAAAGGAGTACAACCAC+AGG + tig0019464:20040-20059 Msa1373820:CDS 35.0%
CACTTTACTACAATCCAGTT+TGG + tig0019464:20205-20224 Msa1373820:CDS 35.0%
GCAACTATAAAATGCCAAAC+TGG - tig0019464:20222-20241 None:intergenic 35.0%
! GCATTTTATAGTTGCATCGT+GGG + tig0019464:20227-20246 Msa1373820:CDS 35.0%
TTACTTACCTGTCAAGATCA+AGG - tig0019464:20275-20294 None:intergenic 35.0%
! GCTAGATAAGTTAAGTTGTG+TGG + tig0019464:20380-20399 Msa1373820:intron 35.0%
AGATTGTTGGGAAAAGCTTA+TGG + tig0019464:20470-20489 Msa1373820:intron 35.0%
! AATAGTTTTCTTTGTTGGCG+GGG + tig0019464:20752-20771 Msa1373820:intron 35.0%
GAGAAAATGGAATGCAAGTA+GGG - tig0019464:20818-20837 None:intergenic 35.0%
AGAGAAAATGGAATGCAAGT+AGG - tig0019464:20819-20838 None:intergenic 35.0%
! CTCTAAAAGATAGTCAACAG+TGG - tig0019464:20852-20871 None:intergenic 35.0%
! ATTCTATATTGGCGGTGTTA+TGG + tig0019464:20978-20997 Msa1373820:CDS 35.0%
!! TTCTATATTGGCGGTGTTAT+GGG + tig0019464:20979-20998 Msa1373820:CDS 35.0%
GGAAAAAGAAACATGGATCA+CGG + tig0019464:21000-21019 Msa1373820:CDS 35.0%
TATCGGAGTGATGAACAAAA+TGG - tig0019464:21100-21119 None:intergenic 35.0%
! GAGTCTTCATTTGTTCTAAG+AGG + tig0019464:21445-21464 Msa1373820:three_prime_UTR 35.0%
!! TCTTCATTTGTTCTAAGAGG+AGG + tig0019464:21448-21467 Msa1373820:three_prime_UTR 35.0%
!! CTTCATTTGTTCTAAGAGGA+GGG + tig0019464:21449-21468 Msa1373820:three_prime_UTR 35.0%
AAACAAGGTTTACCTTCGCA+CGG + tig0019464:14193-14212 Msa1373820:five_prime_UTR 40.0%
! AGGTTGTTGTTGTTGGTTGA+AGG - tig0019464:14340-14359 None:intergenic 40.0%
GTTGGAGAGAGAAAGAAAAG+AGG - tig0019464:14442-14461 None:intergenic 40.0%
CTCCAAAGAAAGGATCCAAA+AGG - tig0019464:14642-14661 None:intergenic 40.0%
!! TTGGATCCTTTCTTTGGAGT+TGG + tig0019464:14643-14662 Msa1373820:intron 40.0%
!! TGGATCCTTTCTTTGGAGTT+GGG + tig0019464:14644-14663 Msa1373820:intron 40.0%
!! TCTTTGGAGTTGGGTAATTG+GGG + tig0019464:14653-14672 Msa1373820:intron 40.0%
! GTGGATCGTTTGCTAATGTA+TGG + tig0019464:14808-14827 Msa1373820:intron 40.0%
TTAGTGTATGTTTGGATCGG+CGG + tig0019464:14929-14948 Msa1373820:intron 40.0%
GTGGCAAAAGCTACAATTTG+TGG + tig0019464:14972-14991 Msa1373820:intron 40.0%
CTGTTTAACCGTATGTTTGG+TGG - tig0019464:15000-15019 None:intergenic 40.0%
! CCAATTCAATAATTTGGGGC+CGG + tig0019464:15462-15481 Msa1373820:intron 40.0%
! CAATTCAATAATTTGGGGCC+GGG + tig0019464:15463-15482 Msa1373820:intron 40.0%
TTGGTCATACAATACCCAAG+AGG - tig0019464:15587-15606 None:intergenic 40.0%
!! AGTTTTGTATGACCAGGATC+AGG - tig0019464:15684-15703 None:intergenic 40.0%
!! AGACGAAGTTTTGTATGACC+AGG - tig0019464:15690-15709 None:intergenic 40.0%
AAACTTCGTCTATCACAGGA+AGG + tig0019464:15699-15718 Msa1373820:five_prime_UTR 40.0%
AACTTGGTTGCACTAGTCAA+AGG + tig0019464:16019-16038 Msa1373820:intron 40.0%
ACTTGGTTGCACTAGTCAAA+GGG + tig0019464:16020-16039 Msa1373820:intron 40.0%
GGGGAATTAGAAATTGCGAA+AGG + tig0019464:16185-16204 Msa1373820:intron 40.0%
GCAAAAAAGACTTTCCGGAA+CGG - tig0019464:16440-16459 None:intergenic 40.0%
!!! TGTTTTCTTAGGGTTTGGTG+TGG + tig0019464:16602-16621 Msa1373820:intron 40.0%
!!! GTTTTCTTAGGGTTTGGTGT+GGG + tig0019464:16603-16622 Msa1373820:intron 40.0%
ATGCGTGACACGAAAACAAA+AGG + tig0019464:16630-16649 Msa1373820:five_prime_UTR 40.0%
ACACGAAAACAAAAGGTGGA+TGG + tig0019464:16637-16656 Msa1373820:intron 40.0%
TTGGGGAACACCTATAGATT+TGG + tig0019464:16763-16782 Msa1373820:five_prime_UTR 40.0%
CAGAGCAAATATCCTGCAAA+AGG - tig0019464:16954-16973 None:intergenic 40.0%
! CTTTTGCAGGATATTTGCTC+TGG + tig0019464:16952-16971 Msa1373820:intron 40.0%
TTATGATGACTAACCGTCTC+AGG - tig0019464:17013-17032 None:intergenic 40.0%
AAAACGAGCTCATTTCTGAG+GGG - tig0019464:17036-17055 None:intergenic 40.0%
! CATCTCTAGACTCTCTTTTG+CGG + tig0019464:17116-17135 Msa1373820:five_prime_UTR 40.0%
! GAGCTCGCTGAAGAATTTTA+TGG + tig0019464:17141-17160 Msa1373820:five_prime_UTR 40.0%
CTTCACTCTATTCCAACACA+CGG - tig0019464:17332-17351 None:intergenic 40.0%
ATTAGATGAACGAGGAGCTA+AGG - tig0019464:17367-17386 None:intergenic 40.0%
ACTTACGCAGAAAATCACGT+TGG - tig0019464:17497-17516 None:intergenic 40.0%
!! AGAGTTGACATGATGGACAA+GGG - tig0019464:17605-17624 None:intergenic 40.0%
!! TAGAGTTGACATGATGGACA+AGG - tig0019464:17606-17625 None:intergenic 40.0%
GTCCATCATGTCAACTCTAT+TGG + tig0019464:17607-17626 Msa1373820:intron 40.0%
TTCCCTTCTGCAGGATATTA+AGG - tig0019464:17646-17665 None:intergenic 40.0%
AGGGAAATCAGTGCAACAAA+TGG + tig0019464:17660-17679 Msa1373820:CDS 40.0%
GAAATCAGTGCAACAAATGG+TGG + tig0019464:17663-17682 Msa1373820:CDS 40.0%
! TCGGGATTCATTGGCTATTA+TGG + tig0019464:17928-17947 Msa1373820:CDS 40.0%
! CGGGATTCATTGGCTATTAT+GGG + tig0019464:17929-17948 Msa1373820:CDS 40.0%
ATGAGGAAGACACATACTTG+TGG - tig0019464:17980-17999 None:intergenic 40.0%
TTTCCATTTCAACCCTAACG+TGG + tig0019464:18023-18042 Msa1373820:intron 40.0%
ATTCCACGTTAGGGTTGAAA+TGG - tig0019464:18029-18048 None:intergenic 40.0%
! GACAAAGCTTTGTGACTTGA+AGG + tig0019464:18137-18156 Msa1373820:CDS 40.0%
! AAGCTTTGTGACTTGAAGGA+TGG + tig0019464:18141-18160 Msa1373820:CDS 40.0%
! AGCTTTGTGACTTGAAGGAT+GGG + tig0019464:18142-18161 Msa1373820:CDS 40.0%
ATCCGTCCAAAGATTGTACA+AGG + tig0019464:18225-18244 Msa1373820:CDS 40.0%
AAAAACCAAGTACCTGCTTC+AGG - tig0019464:18284-18303 None:intergenic 40.0%
TATGGAACCTCTCCAACATT+GGG + tig0019464:18457-18476 Msa1373820:intron 40.0%
! AATTTGGTTCACAGAGCGAA+GGG - tig0019464:18617-18636 None:intergenic 40.0%
! TAATTTGGTTCACAGAGCGA+AGG - tig0019464:18618-18637 None:intergenic 40.0%
TTTGTTTGATTGAGAGGGAG+GGG - tig0019464:18658-18677 None:intergenic 40.0%
! GTTTGTTTGGTTCAAAGGAG+GGG - tig0019464:18707-18726 None:intergenic 40.0%
! GGTTTGTTTGGTTCAAAGGA+GGG - tig0019464:18708-18727 None:intergenic 40.0%
GATACTTGAAGCCTTGAACA+AGG + tig0019464:18888-18907 Msa1373820:intron 40.0%
! TGAAGATATCCTTCTGGAAG+AGG - tig0019464:19015-19034 None:intergenic 40.0%
GAAGCTTGAAGATATCCTTC+TGG - tig0019464:19021-19040 None:intergenic 40.0%
! GCATTCGATCAGCAACATTT+TGG + tig0019464:19072-19091 Msa1373820:CDS 40.0%
GGGAGCTTGGAAAAGAAAAT+AGG + tig0019464:19177-19196 Msa1373820:intron 40.0%
AAGACACTAGCAACAAACAC+AGG - tig0019464:19346-19365 None:intergenic 40.0%
AGTTCTCAAGCTTCCTTCAA+TGG + tig0019464:19763-19782 Msa1373820:CDS 40.0%
ACCTTCAAAAGCAAACTACG+AGG + tig0019464:19844-19863 Msa1373820:CDS 40.0%
CCTTCAAAAGCAAACTACGA+GGG + tig0019464:19845-19864 Msa1373820:CDS 40.0%
CAGTGGCAAATCAAGGAAAA+TGG - tig0019464:19951-19970 None:intergenic 40.0%
! ACAACCACAGGCTTTTCAAT+TGG + tig0019464:20052-20071 Msa1373820:CDS 40.0%
!! TATTTCTGGAGACCTACACA+AGG + tig0019464:20163-20182 Msa1373820:CDS 40.0%
! AGACCTACACAAGGTTGTTT+TGG + tig0019464:20172-20191 Msa1373820:CDS 40.0%
TGACCAAAACAACCTTGTGT+AGG - tig0019464:20178-20197 None:intergenic 40.0%
! GGCATTTTATAGTTGCATCG+TGG + tig0019464:20226-20245 Msa1373820:CDS 40.0%
TGTGTGGTTTCATGACTCTT+AGG + tig0019464:20396-20415 Msa1373820:intron 40.0%
GTGTGGTTTCATGACTCTTA+GGG + tig0019464:20397-20416 Msa1373820:intron 40.0%
AAATGGAATGCAAGTAGGGT+CGG - tig0019464:20814-20833 None:intergenic 40.0%
GGCCATTGCTTAAGAGAAAA+TGG - tig0019464:20831-20850 None:intergenic 40.0%
AAAAGAAACATGGATCACGG+TGG + tig0019464:21003-21022 Msa1373820:CDS 40.0%
TCATCACTCCGATATTCCTT+TGG + tig0019464:21106-21125 Msa1373820:three_prime_UTR 40.0%
CATCACTCCGATATTCCTTT+GGG + tig0019464:21107-21126 Msa1373820:three_prime_UTR 40.0%
AAATGAAAAAGCTCGCCCAA+AGG - tig0019464:21125-21144 None:intergenic 40.0%
! CAAGCACACAAAGTGTCAAA+TGG + tig0019464:21188-21207 Msa1373820:three_prime_UTR 40.0%
AAGTGTCAAATGGTGATCAG+AGG + tig0019464:21198-21217 Msa1373820:three_prime_UTR 40.0%
AGTGTCAAATGGTGATCAGA+GGG + tig0019464:21199-21218 Msa1373820:three_prime_UTR 40.0%
TACATGTCAATACACGACAG+TGG - tig0019464:21366-21385 None:intergenic 40.0%
! GTCGTGTATTGACATGTAGA+CGG + tig0019464:21368-21387 Msa1373820:three_prime_UTR 40.0%
! TCGTGTATTGACATGTAGAC+GGG + tig0019464:21369-21388 Msa1373820:three_prime_UTR 40.0%
GTGCGAAGGTAAACCTTGTT+TGG - tig0019464:14194-14213 None:intergenic 45.0%
CTGAAAATCGAAAGGAACGG+AGG - tig0019464:14360-14379 None:intergenic 45.0%
ACCATCTCGCGAGACAAAAT+GGG - tig0019464:14697-14716 None:intergenic 45.0%
AACCATCTCGCGAGACAAAA+TGG - tig0019464:14698-14717 None:intergenic 45.0%
GAGACTTGCAAGAATCACTG+TGG + tig0019464:14953-14972 Msa1373820:intron 45.0%
TTGTGGCACCACCAAACATA+CGG + tig0019464:14989-15008 Msa1373820:intron 45.0%
CCGGCCCCAAATTATTGAAT+TGG - tig0019464:15465-15484 None:intergenic 45.0%
AACAAACCCCATTGCATCTG+TGG + tig0019464:15743-15762 Msa1373820:five_prime_UTR 45.0%
TTACTGCCACAGATGCAATG+GGG - tig0019464:15752-15771 None:intergenic 45.0%
CTTACTGCCACAGATGCAAT+GGG - tig0019464:15753-15772 None:intergenic 45.0%
ACTTACTGCCACAGATGCAA+TGG - tig0019464:15754-15773 None:intergenic 45.0%
AAAGACTTTCCGGAACGGTA+CGG - tig0019464:16435-16454 None:intergenic 45.0%
CGTGACACGAAAACAAAAGG+TGG + tig0019464:16633-16652 Msa1373820:intron 45.0%
! TGCGCTGATCTTGTATTCTG+TGG + tig0019464:16878-16897 Msa1373820:intron 45.0%
CGTGTGTTGGAATAGAGTGA+AGG + tig0019464:17330-17349 Msa1373820:CDS 45.0%
CAGGTTCAAATGCAACATCC+TGG - tig0019464:17455-17474 None:intergenic 45.0%
TTGGATAAGCCACAAGAGCT+TGG - tig0019464:17478-17497 None:intergenic 45.0%
GCTTTGTGACTTGAAGGATG+GGG + tig0019464:18143-18162 Msa1373820:CDS 45.0%
GTTTGTTTCCTTCCTGAAGC+AGG + tig0019464:18269-18288 Msa1373820:CDS 45.0%
ATGTTGGAGAGGTTCCATAG+AGG - tig0019464:18456-18475 None:intergenic 45.0%
CTATGGAACCTCTCCAACAT+TGG + tig0019464:18456-18475 Msa1373820:intron 45.0%
CAAATCTCCCAATGTTGGAG+AGG - tig0019464:18467-18486 None:intergenic 45.0%
CTCTCCAACATTGGGAGATT+TGG + tig0019464:18465-18484 Msa1373820:intron 45.0%
TCCAACATTGGGAGATTTGG+AGG + tig0019464:18468-18487 Msa1373820:intron 45.0%
CCAACATTGGGAGATTTGGA+GGG + tig0019464:18469-18488 Msa1373820:intron 45.0%
CAACATTGGGAGATTTGGAG+GGG + tig0019464:18470-18489 Msa1373820:intron 45.0%
TGGTTCAAAGGAGGGGAAAA+GGG - tig0019464:18700-18719 None:intergenic 45.0%
TTGGTTCAAAGGAGGGGAAA+AGG - tig0019464:18701-18720 None:intergenic 45.0%
! GGGTTTGTTTGGTTCAAAGG+AGG - tig0019464:18709-18728 None:intergenic 45.0%
TGGAATCTCTCCCTTGTTCA+AGG - tig0019464:18902-18921 None:intergenic 45.0%
AAGGGAGAGATTCCATCAAC+AGG + tig0019464:18907-18926 Msa1373820:CDS 45.0%
TCCATCAACAGGTTCTCTTG+TGG + tig0019464:18918-18937 Msa1373820:CDS 45.0%
TCCACAAGAGAACCTGTTGA+TGG - tig0019464:18922-18941 None:intergenic 45.0%
CAGTGAAAAGATGGCCACAT+TGG + tig0019464:18984-19003 Msa1373820:CDS 45.0%
TCTTCAAGCTTCCCATGACA+TGG + tig0019464:19029-19048 Msa1373820:CDS 45.0%
TTGCTGATCGAATGCTTGCA+TGG - tig0019464:19067-19086 None:intergenic 45.0%
CTGACTTCTTAGCATGGTGA+CGG - tig0019464:19098-19117 None:intergenic 45.0%
TAAGAAGTCAGTCACGCAAC+TGG + tig0019464:19107-19126 Msa1373820:CDS 45.0%
TTGTTGCTAGTGTCTTGCGT+AGG + tig0019464:19350-19369 Msa1373820:intron 45.0%
TGTTGCTAGTGTCTTGCGTA+GGG + tig0019464:19351-19370 Msa1373820:intron 45.0%
GAAGCTTGAGAACTTGAAGC+TGG - tig0019464:19757-19776 None:intergenic 45.0%
!!! CCCTCGTAGTTTGCTTTTGA+AGG - tig0019464:19848-19867 None:intergenic 45.0%
CCAACCAATTGAAAAGCCTG+TGG - tig0019464:20059-20078 None:intergenic 45.0%
! CCACAGGCTTTTCAATTGGT+TGG + tig0019464:20056-20075 Msa1373820:CDS 45.0%
! CAGGCTTTTCAATTGGTTGG+TGG + tig0019464:20059-20078 Msa1373820:CDS 45.0%
ACCTGTCAAGATCAAGGACT+GGG - tig0019464:20269-20288 None:intergenic 45.0%
TACCTGTCAAGATCAAGGAC+TGG - tig0019464:20270-20289 None:intergenic 45.0%
! GGGACTAAATCCCTTGCTAT+AGG - tig0019464:20778-20797 None:intergenic 45.0%
! TAGGGTCGGCTCAAGTATAT+GGG - tig0019464:20800-20819 None:intergenic 45.0%
AAGCTCGCCCAAAGGAATAT+CGG - tig0019464:21117-21136 None:intergenic 45.0%
TGCTTGCAACAGAACTAGGT+AGG - tig0019464:21174-21193 None:intergenic 45.0%
TGTGTGCTTGCAACAGAACT+AGG - tig0019464:21178-21197 None:intergenic 45.0%
! GGAACGGAGGTTGTTGTTGT+TGG - tig0019464:14347-14366 None:intergenic 50.0%
! ACCCATTTTGTCTCGCGAGA+TGG + tig0019464:14693-14712 Msa1373820:intron 50.0%
CCAGGATCAGGTTCGACAAT+GGG - tig0019464:15672-15691 None:intergenic 50.0%
ACCAGGATCAGGTTCGACAA+TGG - tig0019464:15673-15692 None:intergenic 50.0%
TCGTCTATCACAGGAAGGCT+TGG + tig0019464:15704-15723 Msa1373820:five_prime_UTR 50.0%
TCTATCACAGGAAGGCTTGG+AGG + tig0019464:15707-15726 Msa1373820:five_prime_UTR 50.0%
GTAATTGGACCGTACCGTTC+CGG + tig0019464:16423-16442 Msa1373820:five_prime_UTR 50.0%
CACTTGCAATGTCCGTGTGT+TGG + tig0019464:17317-17336 Msa1373820:exon 50.0%
!!! TTGCTGGCTTTTATAGGGCC+AGG + tig0019464:17434-17453 Msa1373820:intron 50.0%
TTGAACCTGCCAAGCTCTTG+TGG + tig0019464:17466-17485 Msa1373820:CDS 50.0%
ATAAGCCACAAGAGCTTGGC+AGG - tig0019464:17474-17493 None:intergenic 50.0%
!! TGCACTGATTTCCCTTCTGC+AGG - tig0019464:17655-17674 None:intergenic 50.0%
TCAAACAGCCACATCTCCAG+CGG + tig0019464:18115-18134 Msa1373820:intron 50.0%
! AGTCACAAAGCTTTGTCCGC+TGG - tig0019464:18134-18153 None:intergenic 50.0%
TCCTTCCTGAAGCAGGTACT+TGG + tig0019464:18276-18295 Msa1373820:intron 50.0%
ACCAAGTACCTGCTTCAGGA+AGG - tig0019464:18280-18299 None:intergenic 50.0%
CCCTCCAAATCTCCCAATGT+TGG - tig0019464:18472-18491 None:intergenic 50.0%
TCAAAGGAGGGGAAAAGGGA+AGG - tig0019464:18696-18715 None:intergenic 50.0%
TGGAAGAGGTAGAGCCAATG+TGG - tig0019464:19001-19020 None:intergenic 50.0%
!! TTGGCTCTACCTCTTCCAGA+AGG + tig0019464:19003-19022 Msa1373820:CDS 50.0%
GTCACCTCTAGCCATGTCAT+GGG - tig0019464:19043-19062 None:intergenic 50.0%
! GCGTGACTGACTTCTTAGCA+TGG - tig0019464:19104-19123 None:intergenic 50.0%
GTGAGATGCTCGACCTATGA+AGG + tig0019464:19400-19419 Msa1373820:intron 50.0%
GTCCATCATGTCCTCGCAAT+CGG - tig0019464:19735-19754 None:intergenic 50.0%
AGCAAACTACGAGGGACGTA+TGG + tig0019464:19853-19872 Msa1373820:CDS 50.0%
! AGGGTCGGCTCAAGTATATG+GGG - tig0019464:20799-20818 None:intergenic 50.0%
! GTAGGGTCGGCTCAAGTATA+TGG - tig0019464:20801-20820 None:intergenic 50.0%
AGAACTAGGTAGGTGCATGC+AGG - tig0019464:21164-21183 None:intergenic 50.0%
TCAAGCCACAGAAGCTGTGT+GGG - tig0019464:21235-21254 None:intergenic 50.0%
ATCAAGCCACAGAAGCTGTG+TGG - tig0019464:21236-21255 None:intergenic 50.0%
GGTTTACCTTCGCACGGACA+AGG + tig0019464:14199-14218 Msa1373820:five_prime_UTR 55.0%
TTCGATCCTTGTCCGTGCGA+AGG - tig0019464:14208-14227 None:intergenic 55.0%
CCCATTGTCGAACCTGATCC+TGG + tig0019464:15669-15688 Msa1373820:five_prime_UTR 55.0%
GAACGAGGAGCTAAGGCATG+TGG - tig0019464:17360-17379 None:intergenic 55.0%
! AGCTTTGTCCGCTGGAGATG+TGG - tig0019464:18126-18145 None:intergenic 55.0%
TTCCATAGAGGTCGAGGTGG+GGG - tig0019464:18444-18463 None:intergenic 55.0%
GTTCCATAGAGGTCGAGGTG+GGG - tig0019464:18445-18464 None:intergenic 55.0%
GGTTCCATAGAGGTCGAGGT+GGG - tig0019464:18446-18465 None:intergenic 55.0%
AGGTTCCATAGAGGTCGAGG+TGG - tig0019464:18447-18466 None:intergenic 55.0%
GAGAGGTTCCATAGAGGTCG+AGG - tig0019464:18450-18469 None:intergenic 55.0%
TTGATTGAGAGGGAGGGGAG+AGG - tig0019464:18653-18672 None:intergenic 55.0%
GCTTCCCATGACATGGCTAG+AGG + tig0019464:19036-19055 Msa1373820:CDS 55.0%
CGTCACCTCTAGCCATGTCA+TGG - tig0019464:19044-19063 None:intergenic 55.0%
! CACCGATTGCGAGGACATGA+TGG + tig0019464:19730-19749 Msa1373820:CDS 55.0%
CTACGAGGGACGTATGGCAA+AGG + tig0019464:19859-19878 Msa1373820:CDS 55.0%
AGGGACGTATGGCAAAGGTC+TGG + tig0019464:19864-19883 Msa1373820:intron 55.0%
TTTCTCCCTCGTCACGGTTG+TGG + tig0019464:20083-20102 Msa1373820:CDS 55.0%
GCCCAGTCCTTGATCTTGAC+AGG + tig0019464:20265-20284 Msa1373820:CDS 55.0%
! GGGTCGGCTCAAGTATATGG+GGG - tig0019464:20798-20817 None:intergenic 55.0%
!! TGCAGATGGGCTATCCCACT+TGG + tig0019464:20936-20955 Msa1373820:intron 55.0%
CATCTCCCACACAGCTTCTG+TGG + tig0019464:21227-21246 Msa1373820:three_prime_UTR 55.0%
ATCCCCCACCTCGACCTCTA+TGG + tig0019464:18439-18458 Msa1373820:intron 60.0%
! GGCACTGTACACCGATTGCG+AGG + tig0019464:19721-19740 Msa1373820:CDS 60.0%
GGTGGCTTTCTCCCTCGTCA+CGG + tig0019464:20077-20096 Msa1373820:CDS 60.0%
TCCCTCGTCACGGTTGTGGT+TGG + tig0019464:20087-20106 Msa1373820:CDS 60.0%
GCCAACCACAACCGTGACGA+GGG - tig0019464:20091-20110 None:intergenic 60.0%
TCGTCACGGTTGTGGTTGGC+CGG + tig0019464:20091-20110 Msa1373820:CDS 60.0%
TGTTGGCGGGGCCTATAGCA+AGG + tig0019464:20764-20783 Msa1373820:intron 60.0%
GTTGGCGGGGCCTATAGCAA+GGG + tig0019464:20765-20784 Msa1373820:intron 60.0%
GGCCAACCACAACCGTGACG+AGG - tig0019464:20092-20111 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0019464 gene 14166 21524 14166 ID=Msa1373820;Name=Msa1373820
tig0019464 mRNA 14166 21524 14166 ID=Msa1373820-mRNA-1;Parent=Msa1373820;Name=Msa1373820-mRNA-1;_AED=0.15;_eAED=0.15;_QI=943|1|1|1|1|0.93|16|451|425
tig0019464 exon 14166 14497 14166 ID=Msa1373820-mRNA-1:exon:3575;Parent=Msa1373820-mRNA-1
tig0019464 exon 15665 15767 15665 ID=Msa1373820-mRNA-1:exon:3576;Parent=Msa1373820-mRNA-1
tig0019464 exon 16423 16492 16423 ID=Msa1373820-mRNA-1:exon:3577;Parent=Msa1373820-mRNA-1
tig0019464 exon 16613 16651 16613 ID=Msa1373820-mRNA-1:exon:3578;Parent=Msa1373820-mRNA-1
tig0019464 exon 16753 16870 16753 ID=Msa1373820-mRNA-1:exon:3579;Parent=Msa1373820-mRNA-1
tig0019464 exon 16961 17018 16961 ID=Msa1373820-mRNA-1:exon:3580;Parent=Msa1373820-mRNA-1
tig0019464 exon 17102 17351 17102 ID=Msa1373820-mRNA-1:exon:3581;Parent=Msa1373820-mRNA-1
tig0019464 exon 17450 17510 17450 ID=Msa1373820-mRNA-1:exon:3582;Parent=Msa1373820-mRNA-1
tig0019464 exon 17659 17718 17659 ID=Msa1373820-mRNA-1:exon:3583;Parent=Msa1373820-mRNA-1
tig0019464 exon 17805 17824 17805 ID=Msa1373820-mRNA-1:exon:3584;Parent=Msa1373820-mRNA-1
tig0019464 exon 17917 17982 17917 ID=Msa1373820-mRNA-1:exon:3585;Parent=Msa1373820-mRNA-1
tig0019464 exon 18123 18290 18123 ID=Msa1373820-mRNA-1:exon:3586;Parent=Msa1373820-mRNA-1
tig0019464 exon 18889 19146 18889 ID=Msa1373820-mRNA-1:exon:3587;Parent=Msa1373820-mRNA-1
tig0019464 exon 19668 19880 19668 ID=Msa1373820-mRNA-1:exon:3588;Parent=Msa1373820-mRNA-1
tig0019464 exon 20015 20286 20015 ID=Msa1373820-mRNA-1:exon:3589;Parent=Msa1373820-mRNA-1
tig0019464 exon 20941 21524 20941 ID=Msa1373820-mRNA-1:exon:3590;Parent=Msa1373820-mRNA-1
tig0019464 five_prime_UTR 14166 14497 14166 ID=Msa1373820-mRNA-1:five_prime_utr;Parent=Msa1373820-mRNA-1
tig0019464 five_prime_UTR 15665 15767 15665 ID=Msa1373820-mRNA-1:five_prime_utr;Parent=Msa1373820-mRNA-1
tig0019464 five_prime_UTR 16423 16492 16423 ID=Msa1373820-mRNA-1:five_prime_utr;Parent=Msa1373820-mRNA-1
tig0019464 five_prime_UTR 16613 16651 16613 ID=Msa1373820-mRNA-1:five_prime_utr;Parent=Msa1373820-mRNA-1
tig0019464 five_prime_UTR 16753 16870 16753 ID=Msa1373820-mRNA-1:five_prime_utr;Parent=Msa1373820-mRNA-1
tig0019464 five_prime_UTR 16961 17018 16961 ID=Msa1373820-mRNA-1:five_prime_utr;Parent=Msa1373820-mRNA-1
tig0019464 five_prime_UTR 17102 17324 17102 ID=Msa1373820-mRNA-1:five_prime_utr;Parent=Msa1373820-mRNA-1
tig0019464 CDS 17325 17351 17325 ID=Msa1373820-mRNA-1:cds;Parent=Msa1373820-mRNA-1
tig0019464 CDS 17450 17510 17450 ID=Msa1373820-mRNA-1:cds;Parent=Msa1373820-mRNA-1
tig0019464 CDS 17659 17718 17659 ID=Msa1373820-mRNA-1:cds;Parent=Msa1373820-mRNA-1
tig0019464 CDS 17805 17824 17805 ID=Msa1373820-mRNA-1:cds;Parent=Msa1373820-mRNA-1
tig0019464 CDS 17917 17982 17917 ID=Msa1373820-mRNA-1:cds;Parent=Msa1373820-mRNA-1
tig0019464 CDS 18123 18290 18123 ID=Msa1373820-mRNA-1:cds;Parent=Msa1373820-mRNA-1
tig0019464 CDS 18889 19146 18889 ID=Msa1373820-mRNA-1:cds;Parent=Msa1373820-mRNA-1
tig0019464 CDS 19668 19880 19668 ID=Msa1373820-mRNA-1:cds;Parent=Msa1373820-mRNA-1
tig0019464 CDS 20015 20286 20015 ID=Msa1373820-mRNA-1:cds;Parent=Msa1373820-mRNA-1
tig0019464 CDS 20941 21073 20941 ID=Msa1373820-mRNA-1:cds;Parent=Msa1373820-mRNA-1
tig0019464 three_prime_UTR 21074 21524 21074 ID=Msa1373820-mRNA-1:three_prime_utr;Parent=Msa1373820-mRNA-1
Gene Sequence

>Msa1373820

ATGTCCGTGTGTTGGAATAGAGTGAAGGGCCAGGATGTTGCATTTGAACCTGCCAAGCTCTTGTGGCTTATCCAACGTGATTTTCTGCAAGGGAAATCAGTGCAACAAATGGTGGATGAAGCTCTTCGACAAGTCCCTAATAAAGATAGAGACAGAAATATTGATATGATCAATCAAATTCGGGATTCATTGGCTATTATGGGTGACAATAGTACGGCCTTTAGCTTACCACAACCACATCTCCAGCGGACAAAGCTTTGTGACTTGAAGGATGGGGAGCTTGATCCATCATATGTGAAGAAAAGGGAGAAGCTAAAAGAGCTTGTTTCTAGTATAATCCGTCCAAAGATTGTACAAGGAAAATCTCTAAATGGGAAAGAGTTTGTTTCCTTCCTGAAGCAGATACTTGAAGCCTTGAACAAGGGAGAGATTCCATCAACAGGTTCTCTTGTGGAGATTTTCAACAAGGACATTCTTGAAAGATGTCTTAAGTTATACAGTGAAAAGATGGCCACATTGGCTCTACCTCTTCCAGAAGGATATCTTCAAGCTTCCCATGACATGGCTAGAGGTGACGCCATGCAAGCATTCGATCAGCAACATTTTGGCCGTCACCATGCTAAGAAGTCAGTCACGCAACTGGATGAAGAAATAGATAAGGTATTTAAGAATGTCATTTTACAAAATGAATATAAATCTTCAAAGCTTTGTGAGGCACTGTACACCGATTGCGAGGACATGATGGACCAGCTTCAAGTTCTCAAGCTTCCTTCAATGGCAAAATTTAATGCAGGTCTCGAGAAATGCAATCGTACTTTTGAGCATGATTGTGTTGGACCTTCAAAAGCAAACTACGAGGGACGTATGGCAAAGATGTTGGTAAAGTCTAAGTCTCTATTTATAAAGGAGTACAACCACAGGCTTTTCAATTGGTTGGTGGCTTTCTCCCTCGTCACGGTTGTGGTTGGCCGGTTTATTATAAAGTTCATTTTGATTGAAATTGGAGGATGGTTACTTTTTATATTTCTGGAGACCTACACAAGGTTGTTTTGGTCAGCAGAGTCACTTTACTACAATCCAGTTTGGCATTTTATAGTTGCATCGTGGGAAACTCTTGTTTACAGCCCAGTCCTTGATCTTGACAGATGGGCTATCCCACTTGGTGTAATAATATCTTTTTTCATTCTATATTGGCGGTGTTATGGGAAAAAGAAACATGGATCACGGTGGCTATTACCATTATATAGCAGCAATAAAAATAGACCAAGAACAGACTAA

Protein sequence

>Msa1373820

MSVCWNRVKGQDVAFEPAKLLWLIQRDFLQGKSVQQMVDEALRQVPNKDRDRNIDMINQIRDSLAIMGDNSTAFSLPQPHLQRTKLCDLKDGELDPSYVKKREKLKELVSSIIRPKIVQGKSLNGKEFVSFLKQILEALNKGEIPSTGSLVEIFNKDILERCLKLYSEKMATLALPLPEGYLQASHDMARGDAMQAFDQQHFGRHHAKKSVTQLDEEIDKVFKNVILQNEYKSSKLCEALYTDCEDMMDQLQVLKLPSMAKFNAGLEKCNRTFEHDCVGPSKANYEGRMAKMLVKSKSLFIKEYNHRLFNWLVAFSLVTVVVGRFIIKFILIEIGGWLLFIFLETYTRLFWSAESLYYNPVWHFIVASWETLVYSPVLDLDRWAIPLGVIISFFILYWRCYGKKKHGSRWLLPLYSSNKNRPRTD*