Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067870 | XP_003589058.1 | 88.889 | 207 | 11 | 2 | 1 | 207 | 1 | 195 | 3.38e-128 | 369 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067870 | sp|Q94JX5|WLIM1_ARATH | 74.872 | 195 | 37 | 2 | 1 | 195 | 1 | 183 | 1.78e-101 | 294 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067870 | B7FH07 | 88.889 | 207 | 11 | 2 | 1 | 207 | 1 | 195 | 1.62e-128 | 369 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0067870 | TF | LIM |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003640 | Msa0067870 | 0.808879 | 2.493107e-50 | -8.615850e-47 |
| Msa0003720 | Msa0067870 | 0.807588 | 4.697324e-50 | -8.615850e-47 |
| Msa0016670 | Msa0067870 | 0.829856 | 4.073583e-55 | -8.615850e-47 |
| Msa0027260 | Msa0067870 | 0.825583 | 4.331026e-54 | -8.615850e-47 |
| Msa0032260 | Msa0067870 | 0.804083 | 2.560975e-49 | -8.615850e-47 |
| Msa0032920 | Msa0067870 | -0.804431 | 2.167248e-49 | -8.615850e-47 |
| Msa0033110 | Msa0067870 | 0.811146 | 8.101601e-51 | -8.615850e-47 |
| Msa0033260 | Msa0067870 | 0.809843 | 1.548211e-50 | -8.615850e-47 |
| Msa0040690 | Msa0067870 | 0.845130 | 4.920384e-59 | -8.615850e-47 |
| Msa0042280 | Msa0067870 | 0.837054 | 6.516667e-57 | -8.615850e-47 |
| Msa0047160 | Msa0067870 | 0.806403 | 8.367382e-50 | -8.615850e-47 |
| Msa0048180 | Msa0067870 | 0.832287 | 1.030210e-55 | -8.615850e-47 |
| Msa0052610 | Msa0067870 | 0.979624 | 2.223334e-148 | -8.615850e-47 |
| Msa0052690 | Msa0067870 | 0.821582 | 3.739991e-53 | -8.615850e-47 |
| Msa0057710 | Msa0067870 | 0.837947 | 3.847657e-57 | -8.615850e-47 |
| Msa0058300 | Msa0067870 | 0.805929 | 1.052667e-49 | -8.615850e-47 |
| Msa0067870 | Msa0074320 | 0.837597 | 4.731309e-57 | -8.615850e-47 |
| Msa0067870 | Msa0077880 | 0.808181 | 3.513564e-50 | -8.615850e-47 |
| Msa0067870 | Msa0091410 | 0.805578 | 1.247812e-49 | -8.615850e-47 |
| Msa0067870 | Msa0094470 | 0.800925 | 1.146485e-48 | -8.615850e-47 |
| Msa0067870 | Msa0097600 | 0.812181 | 4.824098e-51 | -8.615850e-47 |
| Msa0067870 | Msa0097810 | 0.805427 | 1.342158e-49 | -8.615850e-47 |
| Msa0067870 | Msa0097850 | 0.858829 | 6.295252e-63 | -8.615850e-47 |
| Msa0067870 | Msa0098470 | 0.809179 | 2.150183e-50 | -8.615850e-47 |
| Msa0067870 | Msa0100740 | 0.802624 | 5.135446e-49 | -8.615850e-47 |
| Msa0067870 | Msa0103240 | 0.800876 | 1.173200e-48 | -8.615850e-47 |
| Msa0067870 | Msa0115390 | 0.804497 | 2.099795e-49 | -8.615850e-47 |
| Msa0067870 | Msa0118710 | 0.838743 | 2.398524e-57 | -8.615850e-47 |
| Msa0067870 | Msa0121820 | 0.808983 | 2.368245e-50 | -8.615850e-47 |
| Msa0067870 | Msa0125770 | 0.818832 | 1.595741e-52 | -8.615850e-47 |
| Msa0067870 | Msa0128860 | 0.835828 | 1.336541e-56 | -8.615850e-47 |
| Msa0067870 | Msa0137610 | -0.807119 | 5.905197e-50 | -8.615850e-47 |
| Msa0067870 | Msa0167480 | 0.880040 | 7.615149e-70 | -8.615850e-47 |
| Msa0067870 | Msa0172970 | 0.800036 | 1.739908e-48 | -8.615850e-47 |
| Msa0067870 | Msa0174730 | 0.832802 | 7.677198e-56 | -8.615850e-47 |
| Msa0067870 | Msa0187690 | 0.831297 | 1.808126e-55 | -8.615850e-47 |
| Msa0067870 | Msa0187930 | 0.801988 | 6.942340e-49 | -8.615850e-47 |
| Msa0067870 | Msa0188350 | 0.814812 | 1.272990e-51 | -8.615850e-47 |
| Msa0067870 | Msa0188890 | 0.835637 | 1.494087e-56 | -8.615850e-47 |
| Msa0067870 | Msa0189300 | 0.801816 | 7.533333e-49 | -8.615850e-47 |
| Msa0067870 | Msa0194540 | 0.807246 | 5.551828e-50 | -8.615850e-47 |
| Msa0067870 | Msa0197520 | 0.817800 | 2.732932e-52 | -8.615850e-47 |
| Msa0067870 | Msa0226330 | 0.802843 | 4.628283e-49 | -8.615850e-47 |
| Msa0067870 | Msa0226460 | 0.825988 | 3.470632e-54 | -8.615850e-47 |
| Msa0067870 | Msa0231100 | 0.829461 | 5.082051e-55 | -8.615850e-47 |
| Msa0067870 | Msa0231380 | 0.829860 | 4.063513e-55 | -8.615850e-47 |
| Msa0067870 | Msa0231660 | 0.806947 | 6.421698e-50 | -8.615850e-47 |
| Msa0067870 | Msa0241830 | 0.807564 | 4.753182e-50 | -8.615850e-47 |
| Msa0067870 | Msa0249580 | 0.810152 | 1.328816e-50 | -8.615850e-47 |
| Msa0067870 | Msa0254940 | 0.806911 | 6.536125e-50 | -8.615850e-47 |
| Msa0067870 | Msa0262480 | 0.817399 | 3.364942e-52 | -8.615850e-47 |
| Msa0067870 | Msa0270660 | 0.828336 | 9.513217e-55 | -8.615850e-47 |
| Msa0067870 | Msa0277450 | 0.804779 | 1.833332e-49 | -8.615850e-47 |
| Msa0067870 | Msa0292400 | 0.803805 | 2.925102e-49 | -8.615850e-47 |
| Msa0067870 | Msa0296250 | 0.820378 | 7.081233e-53 | -8.615850e-47 |
| Msa0067870 | Msa0298780 | 0.814123 | 1.808590e-51 | -8.615850e-47 |
| Msa0067870 | Msa0300350 | 0.832195 | 1.085617e-55 | -8.615850e-47 |
| Msa0067870 | Msa0302380 | 0.821340 | 4.253693e-53 | -8.615850e-47 |
| Msa0067870 | Msa0304590 | 0.824029 | 1.007156e-53 | -8.615850e-47 |
| Msa0067870 | Msa0304660 | 0.825499 | 4.535064e-54 | -8.615850e-47 |
| Msa0067870 | Msa0322900 | 0.801768 | 7.705561e-49 | -8.615850e-47 |
| Msa0067870 | Msa0326480 | 0.805901 | 1.067012e-49 | -8.615850e-47 |
| Msa0067870 | Msa0331700 | 0.827787 | 1.289886e-54 | -8.615850e-47 |
| Msa0067870 | Msa0357900 | 0.817862 | 2.645271e-52 | -8.615850e-47 |
| Msa0067870 | Msa0357990 | 0.823332 | 1.466571e-53 | -8.615850e-47 |
| Msa0067870 | Msa0369050 | 0.832877 | 7.357702e-56 | -8.615850e-47 |
| Msa0067870 | Msa0370160 | -0.808704 | 2.717850e-50 | -8.615850e-47 |
| Msa0067870 | Msa0423750 | 0.800323 | 1.520929e-48 | -8.615850e-47 |
| Msa0067870 | Msa0435370 | 0.825436 | 4.693494e-54 | -8.615850e-47 |
| Msa0067870 | Msa0435420 | 0.825029 | 5.857190e-54 | -8.615850e-47 |
| Msa0067870 | Msa0437690 | -0.816598 | 5.092083e-52 | -8.615850e-47 |
| Msa0067870 | Msa0443390 | 0.839731 | 1.329952e-57 | -8.615850e-47 |
| Msa0067870 | Msa0458060 | 0.822949 | 1.801009e-53 | -8.615850e-47 |
| Msa0067870 | Msa0479200 | 0.800216 | 1.599177e-48 | -8.615850e-47 |
| Msa0067870 | Msa0508590 | 0.843587 | 1.278418e-58 | -8.615850e-47 |
| Msa0067870 | Msa0508630 | 0.821618 | 3.668509e-53 | -8.615850e-47 |
| Msa0067870 | Msa0508870 | 0.804466 | 2.131776e-49 | -8.615850e-47 |
| Msa0067870 | Msa0509950 | -0.815799 | 7.680214e-52 | -8.615850e-47 |
| Msa0067870 | Msa0518030 | 0.805707 | 1.171979e-49 | -8.615850e-47 |
| Msa0067870 | Msa0525340 | 0.806115 | 9.619048e-50 | -8.615850e-47 |
| Msa0067870 | Msa0526540 | 0.856646 | 2.794005e-62 | -8.615850e-47 |
| Msa0067870 | Msa0527020 | 0.811275 | 7.593364e-51 | -8.615850e-47 |
| Msa0067870 | Msa0561430 | 0.847996 | 8.118054e-60 | -8.615850e-47 |
| Msa0067870 | Msa0571920 | 0.805895 | 1.070270e-49 | -8.615850e-47 |
| Msa0067870 | Msa0576940 | 0.852139 | 5.616188e-61 | -8.615850e-47 |
| Msa0067870 | Msa0577550 | 0.814449 | 1.532318e-51 | -8.615850e-47 |
| Msa0067870 | Msa0581690 | 0.813888 | 2.038000e-51 | -8.615850e-47 |
| Msa0067870 | Msa0603320 | 0.814454 | 1.527756e-51 | -8.615850e-47 |
| Msa0067870 | Msa0615440 | 0.823257 | 1.526946e-53 | -8.615850e-47 |
| Msa0067870 | Msa0616240 | 0.823004 | 1.749410e-53 | -8.615850e-47 |
| Msa0067870 | Msa0620990 | 0.800336 | 1.511975e-48 | -8.615850e-47 |
| Msa0067870 | Msa0621950 | 0.820960 | 5.204973e-53 | -8.615850e-47 |
| Msa0067870 | Msa0654870 | 0.817941 | 2.539850e-52 | -8.615850e-47 |
| Msa0067870 | Msa0666230 | 0.824748 | 6.822696e-54 | -8.615850e-47 |
| Msa0067870 | Msa0669520 | 0.812597 | 3.914107e-51 | -8.615850e-47 |
| Msa0067870 | Msa0669760 | 0.805298 | 1.428032e-49 | -8.615850e-47 |
| Msa0067870 | Msa0677290 | 0.812454 | 4.204793e-51 | -8.615850e-47 |
| Msa0067870 | Msa0692080 | 0.810994 | 8.740036e-51 | -8.615850e-47 |
| Msa0067870 | Msa0698490 | 0.821914 | 3.133424e-53 | -8.615850e-47 |
| Msa0067870 | Msa0698660 | 0.824045 | 9.982850e-54 | -8.615850e-47 |
| Msa0067870 | Msa0699570 | 0.815641 | 8.331830e-52 | -8.615850e-47 |
| Msa0067870 | Msa0709780 | 0.808021 | 3.800213e-50 | -8.615850e-47 |
| Msa0067870 | Msa0719400 | 0.820229 | 7.658578e-53 | -8.615850e-47 |
| Msa0067870 | Msa0738100 | 0.839290 | 1.731347e-57 | -8.615850e-47 |
| Msa0067870 | Msa0750920 | 0.806064 | 9.862776e-50 | -8.615850e-47 |
| Msa0067870 | Msa0785130 | 0.812394 | 4.334632e-51 | -8.615850e-47 |
| Msa0067870 | Msa0789650 | 0.831593 | 1.529041e-55 | -8.615850e-47 |
| Msa0067870 | Msa0790610 | 0.828766 | 7.491798e-55 | -8.615850e-47 |
| Msa0067870 | Msa0800270 | 0.814165 | 1.769849e-51 | -8.615850e-47 |
| Msa0067870 | Msa0804250 | 0.812983 | 3.220869e-51 | -8.615850e-47 |
| Msa0067870 | Msa0817540 | 0.812905 | 3.350320e-51 | -8.615850e-47 |
| Msa0067870 | Msa0826500 | 0.802086 | 6.628437e-49 | -8.615850e-47 |
| Msa0067870 | Msa0838260 | 0.827207 | 1.776914e-54 | -8.615850e-47 |
| Msa0067870 | Msa0902760 | 0.804632 | 1.968174e-49 | -8.615850e-47 |
| Msa0067870 | Msa0944610 | 0.807982 | 3.874310e-50 | -8.615850e-47 |
| Msa0067870 | Msa0949590 | 0.825046 | 5.802469e-54 | -8.615850e-47 |
| Msa0067870 | Msa0970420 | 0.800512 | 1.391858e-48 | -8.615850e-47 |
| Msa0067870 | Msa1000930 | 0.803283 | 3.754020e-49 | -8.615850e-47 |
| Msa0067870 | Msa1006840 | 0.832297 | 1.024311e-55 | -8.615850e-47 |
| Msa0067870 | Msa1019240 | 0.837414 | 5.270659e-57 | -8.615850e-47 |
| Msa0067870 | Msa1019260 | 0.835945 | 1.248855e-56 | -8.615850e-47 |
| Msa0067870 | Msa1033660 | 0.813241 | 2.827875e-51 | -8.615850e-47 |
| Msa0067870 | Msa1040840 | 0.802712 | 4.924794e-49 | -8.615850e-47 |
| Msa0067870 | Msa1066490 | 0.814864 | 1.239549e-51 | -8.615850e-47 |
| Msa0067870 | Msa1073490 | 0.822891 | 1.858015e-53 | -8.615850e-47 |
| Msa0067870 | Msa1079230 | 0.850633 | 1.496799e-60 | -8.615850e-47 |
| Msa0067870 | Msa1093530 | 0.802801 | 4.722662e-49 | -8.615850e-47 |
| Msa0067870 | Msa1104140 | 0.842061 | 3.254986e-58 | -8.615850e-47 |
| Msa0067870 | Msa1104210 | 0.852194 | 5.416070e-61 | -8.615850e-47 |
| Msa0067870 | Msa1106700 | 0.810088 | 1.371594e-50 | -8.615850e-47 |
| Msa0067870 | Msa1117550 | 0.805705 | 1.173373e-49 | -8.615850e-47 |
| Msa0067870 | Msa1124110 | 0.826715 | 2.330514e-54 | -8.615850e-47 |
| Msa0067870 | Msa1126510 | 0.808900 | 2.467991e-50 | -8.615850e-47 |
| Msa0067870 | Msa1131560 | 0.823827 | 1.122933e-53 | -8.615850e-47 |
| Msa0067870 | Msa1135890 | 0.840996 | 6.208419e-58 | -8.615850e-47 |
| Msa0067870 | Msa1143650 | 0.834510 | 2.874835e-56 | -8.615850e-47 |
| Msa0067870 | Msa1155520 | 0.820691 | 6.000680e-53 | -8.615850e-47 |
| Msa0067870 | Msa1160310 | 0.804870 | 1.755372e-49 | -8.615850e-47 |
| Msa0067870 | Msa1166010 | 0.803258 | 3.798956e-49 | -8.615850e-47 |
| Msa0067870 | Msa1166860 | 0.803995 | 2.670997e-49 | -8.615850e-47 |
| Msa0067870 | Msa1166870 | 0.851906 | 6.541488e-61 | -8.615850e-47 |
| Msa0067870 | Msa1168950 | 0.835930 | 1.259666e-56 | -8.615850e-47 |
| Msa0067870 | Msa1169040 | 0.836542 | 8.804762e-57 | -8.615850e-47 |
| Msa0067870 | Msa1173300 | 0.809310 | 2.015350e-50 | -8.615850e-47 |
| Msa0067870 | Msa1179980 | 0.803961 | 2.714518e-49 | -8.615850e-47 |
| Msa0067870 | Msa1183560 | 0.804458 | 2.139523e-49 | -8.615850e-47 |
| Msa0067870 | Msa1202580 | 0.814706 | 1.343671e-51 | -8.615850e-47 |
| Msa0067870 | Msa1207270 | 0.805912 | 1.061488e-49 | -8.615850e-47 |
| Msa0067870 | Msa1256850 | 0.810728 | 9.977105e-51 | -8.615850e-47 |
| Msa0067870 | Msa1262890 | 0.814739 | 1.321505e-51 | -8.615850e-47 |
| Msa0067870 | Msa1265630 | 0.805298 | 1.428207e-49 | -8.615850e-47 |
| Msa0067870 | Msa1270620 | 0.805301 | 1.426396e-49 | -8.615850e-47 |
| Msa0067870 | Msa1270690 | 0.803789 | 2.947564e-49 | -8.615850e-47 |
| Msa0067870 | Msa1271580 | 0.806379 | 8.466141e-50 | -8.615850e-47 |
| Msa0067870 | Msa1275110 | 0.802410 | 5.683818e-49 | -8.615850e-47 |
| Msa0067870 | Msa1275590 | 0.802442 | 5.599736e-49 | -8.615850e-47 |
| Msa0067870 | Msa1292830 | 0.800314 | 1.527226e-48 | -8.615850e-47 |
| Msa0067870 | Msa1306880 | 0.810757 | 9.836426e-51 | -8.615850e-47 |
| Msa0067870 | Msa1307600 | 0.820871 | 5.455422e-53 | -8.615850e-47 |
| Msa0067870 | Msa1329540 | 0.806571 | 7.709770e-50 | -8.615850e-47 |
| Msa0067870 | Msa1333560 | 0.833793 | 4.347995e-56 | -8.615850e-47 |
| Msa0067870 | Msa1341070 | 0.801132 | 1.040209e-48 | -8.615850e-47 |
| Msa0067870 | Msa1360180 | 0.812018 | 5.235100e-51 | -8.615850e-47 |
| Msa0067870 | Msa1360980 | 0.804434 | 2.164238e-49 | -8.615850e-47 |
| Msa0067870 | Msa1363330 | 0.853255 | 2.697105e-61 | -8.615850e-47 |
| Msa0067870 | Msa1374120 | 0.803760 | 2.988671e-49 | -8.615850e-47 |
| Msa0067870 | Msa1379760 | 0.839665 | 1.383173e-57 | -8.615850e-47 |
| Msa0067870 | Msa1386600 | 0.854012 | 1.634227e-61 | -8.615850e-47 |
| Msa0067870 | Msa1386710 | 0.807411 | 5.122219e-50 | -8.615850e-47 |
| Msa0067870 | Msa1406040 | 0.807118 | 5.909906e-50 | -8.615850e-47 |
| Msa0067870 | Msa1423350 | 0.810591 | 1.068429e-50 | -8.615850e-47 |
| Msa0067870 | Msa1432700 | 0.826544 | 2.558846e-54 | -8.615850e-47 |
| Msa0067870 | Msa1450280 | 0.801783 | 7.650692e-49 | -8.615850e-47 |
| Msa0067870 | Msa1454450 | 0.815311 | 9.866204e-52 | -8.615850e-47 |
| Msa0067870 | Msa1461490 | 0.840300 | 9.450150e-58 | -8.615850e-47 |
| Msa0067870 | Msa1465260 | 0.814839 | 1.256086e-51 | -8.615850e-47 |
| Msa0067870 | Msa1465680 | 0.826164 | 3.152879e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067870 | MtrunA17_Chr1g0152431 | 88.889 | 207 | 11 | 2 | 1 | 207 | 1 | 195 | 3.11e-132 | 369 |
| Msa0067870 | MtrunA17_Chr4g0059371 | 58.824 | 187 | 64 | 3 | 2 | 188 | 3 | 176 | 2.05e-75 | 225 |
| Msa0067870 | MtrunA17_Chr3g0113051 | 51.323 | 189 | 76 | 4 | 1 | 187 | 1 | 175 | 6.96e-58 | 181 |
| Msa0067870 | MtrunA17_Chr8g0349391 | 45.128 | 195 | 88 | 5 | 1 | 194 | 1 | 177 | 5.85e-50 | 161 |
| Msa0067870 | MtrunA17_Chr7g0247111 | 44.385 | 187 | 88 | 4 | 1 | 187 | 1 | 171 | 1.18e-48 | 158 |
| Msa0067870 | MtrunA17_Chr8g0386501 | 46.561 | 189 | 77 | 6 | 1 | 187 | 1 | 167 | 9.22e-48 | 155 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0067870 | AT1G10200.1 | 74.872 | 195 | 37 | 2 | 1 | 195 | 1 | 183 | 1.81e-102 | 294 |
| Msa0067870 | AT1G10200.2 | 80.800 | 125 | 24 | 0 | 71 | 195 | 17 | 141 | 2.60e-71 | 213 |
| Msa0067870 | AT2G39900.1 | 50.794 | 189 | 76 | 4 | 1 | 187 | 1 | 174 | 5.78e-57 | 179 |
| Msa0067870 | AT3G55770.3 | 48.168 | 191 | 77 | 4 | 1 | 187 | 1 | 173 | 7.51e-55 | 174 |
| Msa0067870 | AT3G55770.3 | 43.678 | 87 | 49 | 0 | 115 | 201 | 3 | 89 | 8.73e-16 | 72.8 |
| Msa0067870 | AT3G55770.5 | 48.168 | 191 | 77 | 4 | 1 | 187 | 1 | 173 | 7.51e-55 | 174 |
| Msa0067870 | AT3G55770.5 | 43.678 | 87 | 49 | 0 | 115 | 201 | 3 | 89 | 8.73e-16 | 72.8 |
| Msa0067870 | AT3G55770.2 | 48.168 | 191 | 77 | 4 | 1 | 187 | 1 | 173 | 7.51e-55 | 174 |
| Msa0067870 | AT3G55770.2 | 43.678 | 87 | 49 | 0 | 115 | 201 | 3 | 89 | 8.73e-16 | 72.8 |
| Msa0067870 | AT3G55770.1 | 48.168 | 191 | 77 | 4 | 1 | 187 | 1 | 173 | 7.51e-55 | 174 |
| Msa0067870 | AT3G55770.1 | 43.678 | 87 | 49 | 0 | 115 | 201 | 3 | 89 | 8.73e-16 | 72.8 |
| Msa0067870 | AT2G45800.1 | 43.939 | 198 | 92 | 4 | 1 | 195 | 1 | 182 | 4.88e-49 | 159 |
| Msa0067870 | AT1G01780.1 | 41.624 | 197 | 95 | 5 | 1 | 195 | 1 | 179 | 7.30e-48 | 156 |
| Msa0067870 | AT3G61230.1 | 42.157 | 204 | 99 | 5 | 2 | 202 | 3 | 190 | 8.28e-48 | 156 |
| Msa0067870 | AT3G55770.7 | 40.889 | 225 | 77 | 5 | 1 | 187 | 1 | 207 | 2.62e-47 | 155 |
| Msa0067870 | AT3G55770.7 | 43.678 | 87 | 49 | 0 | 115 | 201 | 3 | 89 | 1.95e-15 | 72.8 |
| Msa0067870 | AT2G45800.2 | 44.531 | 128 | 64 | 2 | 71 | 195 | 28 | 151 | 3.35e-30 | 110 |
| Msa0067870 | AT3G55770.4 | 40.288 | 139 | 61 | 4 | 1 | 135 | 1 | 121 | 7.87e-28 | 102 |
| Msa0067870 | AT3G55770.4 | 43.678 | 87 | 49 | 0 | 115 | 201 | 3 | 89 | 6.41e-17 | 74.3 |
| Msa0067870 | AT3G55770.6 | 39.437 | 142 | 64 | 4 | 1 | 138 | 1 | 124 | 6.50e-26 | 97.8 |
| Msa0067870 | AT3G55770.6 | 43.678 | 87 | 49 | 0 | 115 | 201 | 3 | 89 | 9.76e-17 | 73.9 |
Find 66 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTATCTATATTTCTTTC+TGG | 0.117591 | 1_2:-33180947 | None:intergenic |
| TTCTTTCATCATTTGGCTTA+TGG | 0.156505 | 1_2:+33180640 | Msa0067870:CDS |
| CTGGACTCTGATGCATCTTT+TGG | 0.240018 | 1_2:+33181868 | Msa0067870:three_prime_UTR |
| TCCCTCATGTGCTATGTAAT+TGG | 0.275186 | 1_2:-33181507 | None:intergenic |
| AATGAACTTCTTTCATCATT+TGG | 0.298410 | 1_2:+33180633 | Msa0067870:CDS |
| TTGAGCTGAAAATAATTTGA+TGG | 0.311127 | 1_2:-33181935 | None:intergenic |
| AGCATTTGAAACAACTCTTA+TGG | 0.319973 | 1_2:-33181457 | None:intergenic |
| TTTATAAAGGTTACAGTGAA+TGG | 0.352930 | 1_2:+33181425 | Msa0067870:intron |
| TTTGCTTGATCAGTTGAATA+TGG | 0.353364 | 1_2:-33181550 | None:intergenic |
| CTCCATACCGGAGTTACATT+TGG | 0.371704 | 1_2:-33181821 | None:intergenic |
| GTTCATTAACATGAAAATTA+CGG | 0.392058 | 1_2:-33180617 | None:intergenic |
| ACAAATATTGAATACCATAA+TGG | 0.395661 | 1_2:-33181709 | None:intergenic |
| GTCACTGACAATATAATTGT+TGG | 0.398047 | 1_2:+33180030 | Msa0067870:five_prime_UTR |
| GATCAACTGTTCAAAAGAAC+TGG | 0.398776 | 1_2:+33180784 | Msa0067870:CDS |
| TAAAAGAGAAAAGTATAGTT+AGG | 0.405318 | 1_2:+33179982 | None:intergenic |
| CTTGAGGCTTTAGCTGCTGC+AGG | 0.425078 | 1_2:-33181065 | None:intergenic |
| GGAGAGAAATAAAACTAAAG+TGG | 0.425906 | 1_2:-33180104 | None:intergenic |
| TATTCAACTGATCAAGCAAA+AGG | 0.432443 | 1_2:+33181553 | Msa0067870:CDS |
| GCTAAAGCCTCAAGTATGTT+TGG | 0.441559 | 1_2:+33181074 | Msa0067870:CDS |
| ACACTAATTACCTTCTCTGT+TGG | 0.465114 | 1_2:-33181140 | None:intergenic |
| TCACTGACAATATAATTGTT+GGG | 0.465178 | 1_2:+33180031 | Msa0067870:five_prime_UTR |
| GTTGGTGAGGTAAGAAGATA+AGG | 0.471222 | 1_2:+33180163 | Msa0067870:five_prime_UTR |
| CCGGTATGGAGTTCGTTACA+TGG | 0.471286 | 1_2:+33181833 | Msa0067870:three_prime_UTR |
| GGAAATTTGAGCCAGCTTGA+AGG | 0.475377 | 1_2:+33181575 | Msa0067870:CDS |
| GGAACAAGGGACAAATGTTC+TGG | 0.477611 | 1_2:+33181098 | Msa0067870:CDS |
| ACTTGTAGTTGTGGGTGAAC+AGG | 0.478525 | 1_2:+33181969 | Msa0067870:three_prime_UTR |
| TCTCATGGTCACCTTCAAGC+TGG | 0.480325 | 1_2:-33181586 | None:intergenic |
| AAGCGTATTAATAGAGTTCG+TGG | 0.482813 | 1_2:+33181896 | Msa0067870:three_prime_UTR |
| AACAGGTTGAAAATTAGAAT+AGG | 0.493167 | 1_2:+33181986 | Msa0067870:three_prime_UTR |
| CAAGTATGTTTGGTGGAACA+AGG | 0.495604 | 1_2:+33181084 | Msa0067870:CDS |
| GGCACTGGTAAATGTAAGAA+AGG | 0.497607 | 1_2:-33182032 | None:intergenic |
| TTGAAACAACTCTTATGGTA+AGG | 0.498185 | 1_2:-33181452 | None:intergenic |
| AACATAGCAACTTGTAGTTG+TGG | 0.510923 | 1_2:+33181960 | Msa0067870:three_prime_UTR |
| GAGAAATAAAACTAAAGTGG+AGG | 0.517391 | 1_2:-33180101 | None:intergenic |
| AGAAAGAAATATAGATAATG+AGG | 0.518674 | 1_2:+33180949 | Msa0067870:CDS |
| CCTTGAGGGTTCCTTTGCAG+TGG | 0.520760 | 1_2:-33180306 | None:intergenic |
| TTTCATCATTTGGCTTATGG+AGG | 0.523794 | 1_2:+33180643 | Msa0067870:CDS |
| GAGAGAGACATAGACCTTGA+GGG | 0.525903 | 1_2:-33180320 | None:intergenic |
| TTCATAGACTTGTTGCAAGT+TGG | 0.534172 | 1_2:+33180145 | Msa0067870:five_prime_UTR |
| ACATAGCAACTTGTAGTTGT+GGG | 0.534197 | 1_2:+33181961 | Msa0067870:three_prime_UTR |
| GACTAATAGTACACCCTCCA+TGG | 0.536605 | 1_2:-33181481 | None:intergenic |
| AACCAAATGTAACTCCGGTA+TGG | 0.537455 | 1_2:+33181819 | Msa0067870:three_prime_UTR |
| ATGTGGTATAAAGAAAATTG+TGG | 0.552878 | 1_2:-33180074 | None:intergenic |
| AGGAACAACTCAGAAGTGTA+TGG | 0.560932 | 1_2:+33180204 | Msa0067870:CDS |
| ATTCAACTGATCAAGCAAAA+GGG | 0.562604 | 1_2:+33181554 | Msa0067870:CDS |
| AGTTGTTTCAAATGCTGCCA+TGG | 0.564010 | 1_2:+33181464 | Msa0067870:CDS |
| GACATCTGAAACAAGCTTTG+TGG | 0.565667 | 1_2:-33180282 | None:intergenic |
| TTCCAATTACATAGCACATG+AGG | 0.574672 | 1_2:+33181505 | Msa0067870:CDS |
| AATATTTGTTTGCAAGTGTG+CGG | 0.578719 | 1_2:+33181723 | Msa0067870:three_prime_UTR |
| AGACTTGTTGCAAGTTGGTG+AGG | 0.582330 | 1_2:+33180150 | Msa0067870:five_prime_UTR |
| TTCAGATGTCACCACTGCAA+AGG | 0.582786 | 1_2:+33180295 | Msa0067870:CDS |
| GCTTGATCAGTTGAATATGG+TGG | 0.582930 | 1_2:-33181547 | None:intergenic |
| CCATGTAACGAACTCCATAC+CGG | 0.586749 | 1_2:-33181833 | None:intergenic |
| AAAGCCTCAAGTATGTTTGG+TGG | 0.587944 | 1_2:+33181077 | Msa0067870:CDS |
| ACGGAAACCAAATGTAACTC+CGG | 0.588072 | 1_2:+33181814 | Msa0067870:three_prime_UTR |
| GTTTCAAATGCTGCCATGGA+GGG | 0.597804 | 1_2:+33181468 | Msa0067870:CDS |
| ACTAAAGTGGAGGAGAAATG+TGG | 0.601249 | 1_2:-33180091 | None:intergenic |
| TTGAACAGTTGATCAAAGTG+TGG | 0.606620 | 1_2:-33180775 | None:intergenic |
| TGTTCCACCAAACATACTTG+AGG | 0.606764 | 1_2:-33181081 | None:intergenic |
| AACAGTGTATCCAACAGAGA+AGG | 0.613878 | 1_2:+33181130 | Msa0067870:CDS |
| TCCAATTACATAGCACATGA+GGG | 0.619052 | 1_2:+33181506 | Msa0067870:CDS |
| TCATGTGCTATGTAATTGGA+AGG | 0.623562 | 1_2:-33181503 | None:intergenic |
| AAGTATGTTTGGTGGAACAA+GGG | 0.641097 | 1_2:+33181085 | Msa0067870:CDS |
| CCACTGCAAAGGAACCCTCA+AGG | 0.664342 | 1_2:+33180306 | Msa0067870:CDS |
| TGTTTCAAATGCTGCCATGG+AGG | 0.668776 | 1_2:+33181467 | Msa0067870:CDS |
| CATTAACATGAAAATTACGG+TGG | 0.679221 | 1_2:-33180614 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACTCAAAAATAATTTTGTT+CGG | - | chr1_2:33181290-33181309 | None:intergenic | 15.0% |
| !!! | TCAATAATTTGCATTTATAA+AGG | + | chr1_2:33181412-33181431 | Msa0067870:intron | 15.0% |
| !!! | GTGTTTTATTTTGATTTTAA+CGG | + | chr1_2:33181795-33181814 | Msa0067870:three_prime_UTR | 15.0% |
| !!! | AACTCAAAAATAATTTTGTT+CGG | - | chr1_2:33181290-33181309 | None:intergenic | 15.0% |
| !!! | TCAATAATTTGCATTTATAA+AGG | + | chr1_2:33181412-33181431 | Msa0067870:intron | 15.0% |
| !!! | GTGTTTTATTTTGATTTTAA+CGG | + | chr1_2:33181795-33181814 | Msa0067870:three_prime_UTR | 15.0% |
| !! | TTGTAGCTTCAATAAAATTA+CGG | - | chr1_2:33180484-33180503 | None:intergenic | 20.0% |
| !! | GTTCATTAACATGAAAATTA+CGG | - | chr1_2:33180620-33180639 | None:intergenic | 20.0% |
| !! | TCATTATCTATATTTCTTTC+TGG | - | chr1_2:33180950-33180969 | None:intergenic | 20.0% |
| !! | AGAAAGAAATATAGATAATG+AGG | + | chr1_2:33180949-33180968 | Msa0067870:CDS | 20.0% |
| !! | ACAAATATTGAATACCATAA+TGG | - | chr1_2:33181712-33181731 | None:intergenic | 20.0% |
| !! | TTGTAGCTTCAATAAAATTA+CGG | - | chr1_2:33180484-33180503 | None:intergenic | 20.0% |
| !! | GTTCATTAACATGAAAATTA+CGG | - | chr1_2:33180620-33180639 | None:intergenic | 20.0% |
| !! | TCATTATCTATATTTCTTTC+TGG | - | chr1_2:33180950-33180969 | None:intergenic | 20.0% |
| !! | AGAAAGAAATATAGATAATG+AGG | + | chr1_2:33180949-33180968 | Msa0067870:CDS | 20.0% |
| !! | ACAAATATTGAATACCATAA+TGG | - | chr1_2:33181712-33181731 | None:intergenic | 20.0% |
| ! | TCACTGACAATATAATTGTT+GGG | + | chr1_2:33180031-33180050 | Msa0067870:five_prime_UTR | 25.0% |
| ! | ATGTGGTATAAAGAAAATTG+TGG | - | chr1_2:33180077-33180096 | None:intergenic | 25.0% |
| ! | GAACAAAAAAGATTATGAAG+AGG | - | chr1_2:33180128-33180147 | None:intergenic | 25.0% |
| ! | AAGAAGATAAGGAAAAAGAA+TGG | + | chr1_2:33180174-33180193 | Msa0067870:exon | 25.0% |
| ! | CATAGCTTAAGTAAAAACTA+TGG | + | chr1_2:33180506-33180525 | Msa0067870:intron | 25.0% |
| ! | GAAAATTGTTACTGCATATT+TGG | - | chr1_2:33180559-33180578 | None:intergenic | 25.0% |
| ! | AATGAACTTCTTTCATCATT+TGG | + | chr1_2:33180633-33180652 | Msa0067870:CDS | 25.0% |
| !!! | TACTTTTGTTTTGCATACAT+AGG | + | chr1_2:33180905-33180924 | Msa0067870:intron | 25.0% |
| !!! | ACTTTTGTTTTGCATACATA+GGG | + | chr1_2:33180906-33180925 | Msa0067870:intron | 25.0% |
| ! | AGGTAATGAATTCTAAATCT+AGG | + | chr1_2:33180969-33180988 | Msa0067870:intron | 25.0% |
| ! | AAACAGCTCAAAAAATCATA+TGG | - | chr1_2:33181035-33181054 | None:intergenic | 25.0% |
| ! | AGGTAATTAGTGTATATGTT+TGG | + | chr1_2:33181150-33181169 | Msa0067870:intron | 25.0% |
| !! | AGTGTATATGTTTGGAATTA+CGG | + | chr1_2:33181158-33181177 | Msa0067870:intron | 25.0% |
| !!! | TGTAGCTTTTTCTAAAATCA+TGG | + | chr1_2:33181231-33181250 | Msa0067870:intron | 25.0% |
| !!! | TTTTGAGTTTGTGATTAGTT+TGG | + | chr1_2:33181301-33181320 | Msa0067870:intron | 25.0% |
| !!! | AAGTTTTGTATTCAACATCA+GGG | - | chr1_2:33181374-33181393 | None:intergenic | 25.0% |
| !!! | TAAGTTTTGTATTCAACATC+AGG | - | chr1_2:33181375-33181394 | None:intergenic | 25.0% |
| ! | TTTATAAAGGTTACAGTGAA+TGG | + | chr1_2:33181425-33181444 | Msa0067870:intron | 25.0% |
| ! | TTGAGCTGAAAATAATTTGA+TGG | - | chr1_2:33181938-33181957 | None:intergenic | 25.0% |
| !! | AACAGGTTGAAAATTAGAAT+AGG | + | chr1_2:33181986-33182005 | Msa0067870:three_prime_UTR | 25.0% |
| !!! | GCTTTATTTTCAATTTCTGA+TGG | - | chr1_2:33182056-33182075 | None:intergenic | 25.0% |
| ! | TCACTGACAATATAATTGTT+GGG | + | chr1_2:33180031-33180050 | Msa0067870:five_prime_UTR | 25.0% |
| ! | ATGTGGTATAAAGAAAATTG+TGG | - | chr1_2:33180077-33180096 | None:intergenic | 25.0% |
| ! | GAACAAAAAAGATTATGAAG+AGG | - | chr1_2:33180128-33180147 | None:intergenic | 25.0% |
| ! | AAGAAGATAAGGAAAAAGAA+TGG | + | chr1_2:33180174-33180193 | Msa0067870:exon | 25.0% |
| ! | CATAGCTTAAGTAAAAACTA+TGG | + | chr1_2:33180506-33180525 | Msa0067870:intron | 25.0% |
| ! | GAAAATTGTTACTGCATATT+TGG | - | chr1_2:33180559-33180578 | None:intergenic | 25.0% |
| ! | AATGAACTTCTTTCATCATT+TGG | + | chr1_2:33180633-33180652 | Msa0067870:CDS | 25.0% |
| !!! | TACTTTTGTTTTGCATACAT+AGG | + | chr1_2:33180905-33180924 | Msa0067870:intron | 25.0% |
| !!! | ACTTTTGTTTTGCATACATA+GGG | + | chr1_2:33180906-33180925 | Msa0067870:intron | 25.0% |
| ! | AGGTAATGAATTCTAAATCT+AGG | + | chr1_2:33180969-33180988 | Msa0067870:intron | 25.0% |
| ! | AAACAGCTCAAAAAATCATA+TGG | - | chr1_2:33181035-33181054 | None:intergenic | 25.0% |
| ! | AGGTAATTAGTGTATATGTT+TGG | + | chr1_2:33181150-33181169 | Msa0067870:intron | 25.0% |
| !! | AGTGTATATGTTTGGAATTA+CGG | + | chr1_2:33181158-33181177 | Msa0067870:intron | 25.0% |
| !!! | TGTAGCTTTTTCTAAAATCA+TGG | + | chr1_2:33181231-33181250 | Msa0067870:intron | 25.0% |
| !!! | TTTTGAGTTTGTGATTAGTT+TGG | + | chr1_2:33181301-33181320 | Msa0067870:intron | 25.0% |
| !!! | AAGTTTTGTATTCAACATCA+GGG | - | chr1_2:33181374-33181393 | None:intergenic | 25.0% |
| !!! | TAAGTTTTGTATTCAACATC+AGG | - | chr1_2:33181375-33181394 | None:intergenic | 25.0% |
| ! | TTTATAAAGGTTACAGTGAA+TGG | + | chr1_2:33181425-33181444 | Msa0067870:intron | 25.0% |
| ! | TTGAGCTGAAAATAATTTGA+TGG | - | chr1_2:33181938-33181957 | None:intergenic | 25.0% |
| !! | AACAGGTTGAAAATTAGAAT+AGG | + | chr1_2:33181986-33182005 | Msa0067870:three_prime_UTR | 25.0% |
| !!! | GCTTTATTTTCAATTTCTGA+TGG | - | chr1_2:33182056-33182075 | None:intergenic | 25.0% |
| GTCACTGACAATATAATTGT+TGG | + | chr1_2:33180030-33180049 | Msa0067870:five_prime_UTR | 30.0% | |
| GAGAAATAAAACTAAAGTGG+AGG | - | chr1_2:33180104-33180123 | None:intergenic | 30.0% | |
| GGAGAGAAATAAAACTAAAG+TGG | - | chr1_2:33180107-33180126 | None:intergenic | 30.0% | |
| ! | ACCTCTTAGACATTTCTTTT+TGG | + | chr1_2:33180346-33180365 | Msa0067870:intron | 30.0% |
| ACCAAAAAGAAATGTCTAAG+AGG | - | chr1_2:33180350-33180369 | None:intergenic | 30.0% | |
| TTACTGCATATTTGGATTCA+CGG | - | chr1_2:33180551-33180570 | None:intergenic | 30.0% | |
| TGAAAATGCTTATGAACAAC+TGG | - | chr1_2:33180587-33180606 | None:intergenic | 30.0% | |
| CATTAACATGAAAATTACGG+TGG | - | chr1_2:33180617-33180636 | None:intergenic | 30.0% | |
| ! | TTCTTTCATCATTTGGCTTA+TGG | + | chr1_2:33180640-33180659 | Msa0067870:CDS | 30.0% |
| ! | AAGCAACTACAATTCTTTTG+AGG | + | chr1_2:33180735-33180754 | Msa0067870:intron | 30.0% |
| ! | AGCAACTACAATTCTTTTGA+GGG | + | chr1_2:33180736-33180755 | Msa0067870:intron | 30.0% |
| !!! | TACCTTCAAAGCTTTTTTCA+AGG | - | chr1_2:33180813-33180832 | None:intergenic | 30.0% |
| !! | AAAAGCTTTGAAGGTAACAA+AGG | + | chr1_2:33180817-33180836 | Msa0067870:intron | 30.0% |
| !!! | CTTTCTGGTTTGACAATTTT+TGG | - | chr1_2:33180935-33180954 | None:intergenic | 30.0% |
| !!! | AGCTTTTTCTAAAATCATGG+TGG | + | chr1_2:33181234-33181253 | Msa0067870:intron | 30.0% |
| TTGAAACAACTCTTATGGTA+AGG | - | chr1_2:33181455-33181474 | None:intergenic | 30.0% | |
| ! | AGCATTTGAAACAACTCTTA+TGG | - | chr1_2:33181460-33181479 | None:intergenic | 30.0% |
| TTTGCTTGATCAGTTGAATA+TGG | - | chr1_2:33181553-33181572 | None:intergenic | 30.0% | |
| TATTCAACTGATCAAGCAAA+AGG | + | chr1_2:33181553-33181572 | Msa0067870:CDS | 30.0% | |
| ATTCAACTGATCAAGCAAAA+GGG | + | chr1_2:33181554-33181573 | Msa0067870:CDS | 30.0% | |
| AAAAATGCTGGGAAAATCAA+TGG | + | chr1_2:33181608-33181627 | Msa0067870:CDS | 30.0% | |
| AATATTTGTTTGCAAGTGTG+CGG | + | chr1_2:33181723-33181742 | Msa0067870:three_prime_UTR | 30.0% | |
| !!! | AGTTCGTTACATGGTTTTAT+TGG | + | chr1_2:33181842-33181861 | Msa0067870:three_prime_UTR | 30.0% |
| GTCACTGACAATATAATTGT+TGG | + | chr1_2:33180030-33180049 | Msa0067870:five_prime_UTR | 30.0% | |
| GAGAAATAAAACTAAAGTGG+AGG | - | chr1_2:33180104-33180123 | None:intergenic | 30.0% | |
| GGAGAGAAATAAAACTAAAG+TGG | - | chr1_2:33180107-33180126 | None:intergenic | 30.0% | |
| ! | ACCTCTTAGACATTTCTTTT+TGG | + | chr1_2:33180346-33180365 | Msa0067870:intron | 30.0% |
| ACCAAAAAGAAATGTCTAAG+AGG | - | chr1_2:33180350-33180369 | None:intergenic | 30.0% | |
| TTACTGCATATTTGGATTCA+CGG | - | chr1_2:33180551-33180570 | None:intergenic | 30.0% | |
| TGAAAATGCTTATGAACAAC+TGG | - | chr1_2:33180587-33180606 | None:intergenic | 30.0% | |
| CATTAACATGAAAATTACGG+TGG | - | chr1_2:33180617-33180636 | None:intergenic | 30.0% | |
| ! | TTCTTTCATCATTTGGCTTA+TGG | + | chr1_2:33180640-33180659 | Msa0067870:CDS | 30.0% |
| ! | AAGCAACTACAATTCTTTTG+AGG | + | chr1_2:33180735-33180754 | Msa0067870:intron | 30.0% |
| ! | AGCAACTACAATTCTTTTGA+GGG | + | chr1_2:33180736-33180755 | Msa0067870:intron | 30.0% |
| !!! | TACCTTCAAAGCTTTTTTCA+AGG | - | chr1_2:33180813-33180832 | None:intergenic | 30.0% |
| !! | AAAAGCTTTGAAGGTAACAA+AGG | + | chr1_2:33180817-33180836 | Msa0067870:intron | 30.0% |
| !!! | CTTTCTGGTTTGACAATTTT+TGG | - | chr1_2:33180935-33180954 | None:intergenic | 30.0% |
| !!! | AGCTTTTTCTAAAATCATGG+TGG | + | chr1_2:33181234-33181253 | Msa0067870:intron | 30.0% |
| TTGAAACAACTCTTATGGTA+AGG | - | chr1_2:33181455-33181474 | None:intergenic | 30.0% | |
| ! | AGCATTTGAAACAACTCTTA+TGG | - | chr1_2:33181460-33181479 | None:intergenic | 30.0% |
| TTTGCTTGATCAGTTGAATA+TGG | - | chr1_2:33181553-33181572 | None:intergenic | 30.0% | |
| TATTCAACTGATCAAGCAAA+AGG | + | chr1_2:33181553-33181572 | Msa0067870:CDS | 30.0% | |
| ATTCAACTGATCAAGCAAAA+GGG | + | chr1_2:33181554-33181573 | Msa0067870:CDS | 30.0% | |
| AAAAATGCTGGGAAAATCAA+TGG | + | chr1_2:33181608-33181627 | Msa0067870:CDS | 30.0% | |
| AATATTTGTTTGCAAGTGTG+CGG | + | chr1_2:33181723-33181742 | Msa0067870:three_prime_UTR | 30.0% | |
| !!! | AGTTCGTTACATGGTTTTAT+TGG | + | chr1_2:33181842-33181861 | Msa0067870:three_prime_UTR | 30.0% |
| !! | TTCATAGACTTGTTGCAAGT+TGG | + | chr1_2:33180145-33180164 | Msa0067870:five_prime_UTR | 35.0% |
| ! | CTAGTTTAGCCTTCTAGTAT+TGG | + | chr1_2:33180384-33180403 | Msa0067870:intron | 35.0% |
| CTAACAGATCCAATACTAGA+AGG | - | chr1_2:33180396-33180415 | None:intergenic | 35.0% | |
| ! | TTTCATCATTTGGCTTATGG+AGG | + | chr1_2:33180643-33180662 | Msa0067870:CDS | 35.0% |
| TTGAACAGTTGATCAAAGTG+TGG | - | chr1_2:33180778-33180797 | None:intergenic | 35.0% | |
| GATCAACTGTTCAAAAGAAC+TGG | + | chr1_2:33180784-33180803 | Msa0067870:CDS | 35.0% | |
| ! | AGCCTTGAAAAAAGCTTTGA+AGG | + | chr1_2:33180808-33180827 | Msa0067870:CDS | 35.0% |
| ! | AAGTATGTTTGGTGGAACAA+GGG | + | chr1_2:33181085-33181104 | Msa0067870:CDS | 35.0% |
| ACACTAATTACCTTCTCTGT+TGG | - | chr1_2:33181143-33181162 | None:intergenic | 35.0% | |
| !! | CGGCTAGTTTAACAATATCA+CGG | + | chr1_2:33181178-33181197 | Msa0067870:intron | 35.0% |
| TCATGTGCTATGTAATTGGA+AGG | - | chr1_2:33181506-33181525 | None:intergenic | 35.0% | |
| TTCCAATTACATAGCACATG+AGG | + | chr1_2:33181505-33181524 | Msa0067870:CDS | 35.0% | |
| TCCAATTACATAGCACATGA+GGG | + | chr1_2:33181506-33181525 | Msa0067870:CDS | 35.0% | |
| ! | TTTTCCCAGCATTTTTCTCA+TGG | - | chr1_2:33181604-33181623 | None:intergenic | 35.0% |
| !! | CATGTTTTTGCTTGCCATTA+TGG | + | chr1_2:33181695-33181714 | Msa0067870:three_prime_UTR | 35.0% |
| AAGCGTATTAATAGAGTTCG+TGG | + | chr1_2:33181896-33181915 | Msa0067870:three_prime_UTR | 35.0% | |
| AACATAGCAACTTGTAGTTG+TGG | + | chr1_2:33181960-33181979 | Msa0067870:three_prime_UTR | 35.0% | |
| ACATAGCAACTTGTAGTTGT+GGG | + | chr1_2:33181961-33181980 | Msa0067870:three_prime_UTR | 35.0% | |
| ! | TTTTCAATTTCTGATGGCAC+TGG | - | chr1_2:33182050-33182069 | None:intergenic | 35.0% |
| !! | TTCATAGACTTGTTGCAAGT+TGG | + | chr1_2:33180145-33180164 | Msa0067870:five_prime_UTR | 35.0% |
| ! | CTAGTTTAGCCTTCTAGTAT+TGG | + | chr1_2:33180384-33180403 | Msa0067870:intron | 35.0% |
| CTAACAGATCCAATACTAGA+AGG | - | chr1_2:33180396-33180415 | None:intergenic | 35.0% | |
| ! | TTTCATCATTTGGCTTATGG+AGG | + | chr1_2:33180643-33180662 | Msa0067870:CDS | 35.0% |
| TTGAACAGTTGATCAAAGTG+TGG | - | chr1_2:33180778-33180797 | None:intergenic | 35.0% | |
| GATCAACTGTTCAAAAGAAC+TGG | + | chr1_2:33180784-33180803 | Msa0067870:CDS | 35.0% | |
| ! | AGCCTTGAAAAAAGCTTTGA+AGG | + | chr1_2:33180808-33180827 | Msa0067870:CDS | 35.0% |
| ! | AAGTATGTTTGGTGGAACAA+GGG | + | chr1_2:33181085-33181104 | Msa0067870:CDS | 35.0% |
| ACACTAATTACCTTCTCTGT+TGG | - | chr1_2:33181143-33181162 | None:intergenic | 35.0% | |
| !! | CGGCTAGTTTAACAATATCA+CGG | + | chr1_2:33181178-33181197 | Msa0067870:intron | 35.0% |
| TCATGTGCTATGTAATTGGA+AGG | - | chr1_2:33181506-33181525 | None:intergenic | 35.0% | |
| TTCCAATTACATAGCACATG+AGG | + | chr1_2:33181505-33181524 | Msa0067870:CDS | 35.0% | |
| TCCAATTACATAGCACATGA+GGG | + | chr1_2:33181506-33181525 | Msa0067870:CDS | 35.0% | |
| ! | TTTTCCCAGCATTTTTCTCA+TGG | - | chr1_2:33181604-33181623 | None:intergenic | 35.0% |
| !! | CATGTTTTTGCTTGCCATTA+TGG | + | chr1_2:33181695-33181714 | Msa0067870:three_prime_UTR | 35.0% |
| AAGCGTATTAATAGAGTTCG+TGG | + | chr1_2:33181896-33181915 | Msa0067870:three_prime_UTR | 35.0% | |
| AACATAGCAACTTGTAGTTG+TGG | + | chr1_2:33181960-33181979 | Msa0067870:three_prime_UTR | 35.0% | |
| ACATAGCAACTTGTAGTTGT+GGG | + | chr1_2:33181961-33181980 | Msa0067870:three_prime_UTR | 35.0% | |
| ! | TTTTCAATTTCTGATGGCAC+TGG | - | chr1_2:33182050-33182069 | None:intergenic | 35.0% |
| ACTAAAGTGGAGGAGAAATG+TGG | - | chr1_2:33180094-33180113 | None:intergenic | 40.0% | |
| ! | GTTGGTGAGGTAAGAAGATA+AGG | + | chr1_2:33180163-33180182 | Msa0067870:five_prime_UTR | 40.0% |
| GGAAAAAGAATGGCATTTGC+AGG | + | chr1_2:33180184-33180203 | Msa0067870:exon | 40.0% | |
| ! | AGGAACAACTCAGAAGTGTA+TGG | + | chr1_2:33180204-33180223 | Msa0067870:CDS | 40.0% |
| ! | GACATCTGAAACAAGCTTTG+TGG | - | chr1_2:33180285-33180304 | None:intergenic | 40.0% |
| GCTAAAGCCTCAAGTATGTT+TGG | + | chr1_2:33181074-33181093 | Msa0067870:CDS | 40.0% | |
| AAAGCCTCAAGTATGTTTGG+TGG | + | chr1_2:33181077-33181096 | Msa0067870:CDS | 40.0% | |
| TGTTCCACCAAACATACTTG+AGG | - | chr1_2:33181084-33181103 | None:intergenic | 40.0% | |
| ! | CAAGTATGTTTGGTGGAACA+AGG | + | chr1_2:33181084-33181103 | Msa0067870:CDS | 40.0% |
| AACAGTGTATCCAACAGAGA+AGG | + | chr1_2:33181130-33181149 | Msa0067870:CDS | 40.0% | |
| GTTCGGATTTGTGATGAGTT+TGG | - | chr1_2:33181273-33181292 | None:intergenic | 40.0% | |
| TGCAACTTTCGCCAAAATCA+CGG | - | chr1_2:33181345-33181364 | None:intergenic | 40.0% | |
| ! | AGTTGTTTCAAATGCTGCCA+TGG | + | chr1_2:33181464-33181483 | Msa0067870:CDS | 40.0% |
| TCCCTCATGTGCTATGTAAT+TGG | - | chr1_2:33181510-33181529 | None:intergenic | 40.0% | |
| GCTTGATCAGTTGAATATGG+TGG | - | chr1_2:33181550-33181569 | None:intergenic | 40.0% | |
| GTGACCATGAGAAAAATGCT+GGG | + | chr1_2:33181597-33181616 | Msa0067870:CDS | 40.0% | |
| ACGGAAACCAAATGTAACTC+CGG | + | chr1_2:33181814-33181833 | Msa0067870:three_prime_UTR | 40.0% | |
| AACCAAATGTAACTCCGGTA+TGG | + | chr1_2:33181819-33181838 | Msa0067870:three_prime_UTR | 40.0% | |
| !!! | TACATGGTTTTATTGGCGTC+TGG | + | chr1_2:33181849-33181868 | Msa0067870:three_prime_UTR | 40.0% |
| !! | GGCACTGGTAAATGTAAGAA+AGG | - | chr1_2:33182035-33182054 | None:intergenic | 40.0% |
| ACTAAAGTGGAGGAGAAATG+TGG | - | chr1_2:33180094-33180113 | None:intergenic | 40.0% | |
| ! | GTTGGTGAGGTAAGAAGATA+AGG | + | chr1_2:33180163-33180182 | Msa0067870:five_prime_UTR | 40.0% |
| GGAAAAAGAATGGCATTTGC+AGG | + | chr1_2:33180184-33180203 | Msa0067870:exon | 40.0% | |
| ! | AGGAACAACTCAGAAGTGTA+TGG | + | chr1_2:33180204-33180223 | Msa0067870:CDS | 40.0% |
| ! | GACATCTGAAACAAGCTTTG+TGG | - | chr1_2:33180285-33180304 | None:intergenic | 40.0% |
| GCTAAAGCCTCAAGTATGTT+TGG | + | chr1_2:33181074-33181093 | Msa0067870:CDS | 40.0% | |
| AAAGCCTCAAGTATGTTTGG+TGG | + | chr1_2:33181077-33181096 | Msa0067870:CDS | 40.0% | |
| TGTTCCACCAAACATACTTG+AGG | - | chr1_2:33181084-33181103 | None:intergenic | 40.0% | |
| ! | CAAGTATGTTTGGTGGAACA+AGG | + | chr1_2:33181084-33181103 | Msa0067870:CDS | 40.0% |
| AACAGTGTATCCAACAGAGA+AGG | + | chr1_2:33181130-33181149 | Msa0067870:CDS | 40.0% | |
| GTTCGGATTTGTGATGAGTT+TGG | - | chr1_2:33181273-33181292 | None:intergenic | 40.0% | |
| TGCAACTTTCGCCAAAATCA+CGG | - | chr1_2:33181345-33181364 | None:intergenic | 40.0% | |
| ! | AGTTGTTTCAAATGCTGCCA+TGG | + | chr1_2:33181464-33181483 | Msa0067870:CDS | 40.0% |
| TCCCTCATGTGCTATGTAAT+TGG | - | chr1_2:33181510-33181529 | None:intergenic | 40.0% | |
| GCTTGATCAGTTGAATATGG+TGG | - | chr1_2:33181550-33181569 | None:intergenic | 40.0% | |
| GTGACCATGAGAAAAATGCT+GGG | + | chr1_2:33181597-33181616 | Msa0067870:CDS | 40.0% | |
| ACGGAAACCAAATGTAACTC+CGG | + | chr1_2:33181814-33181833 | Msa0067870:three_prime_UTR | 40.0% | |
| AACCAAATGTAACTCCGGTA+TGG | + | chr1_2:33181819-33181838 | Msa0067870:three_prime_UTR | 40.0% | |
| !!! | TACATGGTTTTATTGGCGTC+TGG | + | chr1_2:33181849-33181868 | Msa0067870:three_prime_UTR | 40.0% |
| !! | GGCACTGGTAAATGTAAGAA+AGG | - | chr1_2:33182035-33182054 | None:intergenic | 40.0% |
| !! | AGACTTGTTGCAAGTTGGTG+AGG | + | chr1_2:33180150-33180169 | Msa0067870:five_prime_UTR | 45.0% |
| TTCAGATGTCACCACTGCAA+AGG | + | chr1_2:33180295-33180314 | Msa0067870:CDS | 45.0% | |
| GAGAGAGACATAGACCTTGA+GGG | - | chr1_2:33180323-33180342 | None:intergenic | 45.0% | |
| TGAGAGAGACATAGACCTTG+AGG | - | chr1_2:33180324-33180343 | None:intergenic | 45.0% | |
| GGAACAAGGGACAAATGTTC+TGG | + | chr1_2:33181098-33181117 | Msa0067870:CDS | 45.0% | |
| GATGAGTTTGGCAGAATCTG+TGG | - | chr1_2:33181261-33181280 | None:intergenic | 45.0% | |
| ! | TCATTGTGCGACCGTGATTT+TGG | + | chr1_2:33181331-33181350 | Msa0067870:intron | 45.0% |
| TGTTTCAAATGCTGCCATGG+AGG | + | chr1_2:33181467-33181486 | Msa0067870:CDS | 45.0% | |
| GTTTCAAATGCTGCCATGGA+GGG | + | chr1_2:33181468-33181487 | Msa0067870:CDS | 45.0% | |
| GACTAATAGTACACCCTCCA+TGG | - | chr1_2:33181484-33181503 | None:intergenic | 45.0% | |
| GGAAATTTGAGCCAGCTTGA+AGG | + | chr1_2:33181575-33181594 | Msa0067870:CDS | 45.0% | |
| GGTGACCATGAGAAAAATGC+TGG | + | chr1_2:33181596-33181615 | Msa0067870:CDS | 45.0% | |
| CTCCATACCGGAGTTACATT+TGG | - | chr1_2:33181824-33181843 | None:intergenic | 45.0% | |
| CCATGTAACGAACTCCATAC+CGG | - | chr1_2:33181836-33181855 | None:intergenic | 45.0% | |
| ! | CTGGACTCTGATGCATCTTT+TGG | + | chr1_2:33181868-33181887 | Msa0067870:three_prime_UTR | 45.0% |
| ACTTGTAGTTGTGGGTGAAC+AGG | + | chr1_2:33181969-33181988 | Msa0067870:three_prime_UTR | 45.0% | |
| !! | AGACTTGTTGCAAGTTGGTG+AGG | + | chr1_2:33180150-33180169 | Msa0067870:five_prime_UTR | 45.0% |
| TTCAGATGTCACCACTGCAA+AGG | + | chr1_2:33180295-33180314 | Msa0067870:CDS | 45.0% | |
| GAGAGAGACATAGACCTTGA+GGG | - | chr1_2:33180323-33180342 | None:intergenic | 45.0% | |
| TGAGAGAGACATAGACCTTG+AGG | - | chr1_2:33180324-33180343 | None:intergenic | 45.0% | |
| GGAACAAGGGACAAATGTTC+TGG | + | chr1_2:33181098-33181117 | Msa0067870:CDS | 45.0% | |
| GATGAGTTTGGCAGAATCTG+TGG | - | chr1_2:33181261-33181280 | None:intergenic | 45.0% | |
| ! | TCATTGTGCGACCGTGATTT+TGG | + | chr1_2:33181331-33181350 | Msa0067870:intron | 45.0% |
| TGTTTCAAATGCTGCCATGG+AGG | + | chr1_2:33181467-33181486 | Msa0067870:CDS | 45.0% | |
| GTTTCAAATGCTGCCATGGA+GGG | + | chr1_2:33181468-33181487 | Msa0067870:CDS | 45.0% | |
| GACTAATAGTACACCCTCCA+TGG | - | chr1_2:33181484-33181503 | None:intergenic | 45.0% | |
| GGAAATTTGAGCCAGCTTGA+AGG | + | chr1_2:33181575-33181594 | Msa0067870:CDS | 45.0% | |
| GGTGACCATGAGAAAAATGC+TGG | + | chr1_2:33181596-33181615 | Msa0067870:CDS | 45.0% | |
| CTCCATACCGGAGTTACATT+TGG | - | chr1_2:33181824-33181843 | None:intergenic | 45.0% | |
| CCATGTAACGAACTCCATAC+CGG | - | chr1_2:33181836-33181855 | None:intergenic | 45.0% | |
| ! | CTGGACTCTGATGCATCTTT+TGG | + | chr1_2:33181868-33181887 | Msa0067870:three_prime_UTR | 45.0% |
| ACTTGTAGTTGTGGGTGAAC+AGG | + | chr1_2:33181969-33181988 | Msa0067870:three_prime_UTR | 45.0% | |
| TCTCATGGTCACCTTCAAGC+TGG | - | chr1_2:33181589-33181608 | None:intergenic | 50.0% | |
| CCGGTATGGAGTTCGTTACA+TGG | + | chr1_2:33181833-33181852 | Msa0067870:three_prime_UTR | 50.0% | |
| TCTCATGGTCACCTTCAAGC+TGG | - | chr1_2:33181589-33181608 | None:intergenic | 50.0% | |
| CCGGTATGGAGTTCGTTACA+TGG | + | chr1_2:33181833-33181852 | Msa0067870:three_prime_UTR | 50.0% | |
| CCTTGAGGGTTCCTTTGCAG+TGG | - | chr1_2:33180309-33180328 | None:intergenic | 55.0% | |
| CCACTGCAAAGGAACCCTCA+AGG | + | chr1_2:33180306-33180325 | Msa0067870:CDS | 55.0% | |
| ! | CTTGAGGCTTTAGCTGCTGC+AGG | - | chr1_2:33181068-33181087 | None:intergenic | 55.0% |
| CCTTGAGGGTTCCTTTGCAG+TGG | - | chr1_2:33180309-33180328 | None:intergenic | 55.0% | |
| CCACTGCAAAGGAACCCTCA+AGG | + | chr1_2:33180306-33180325 | Msa0067870:CDS | 55.0% | |
| ! | CTTGAGGCTTTAGCTGCTGC+AGG | - | chr1_2:33181068-33181087 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 33179983 | 33182078 | 33179983 | ID=Msa0067870;Name=Msa0067870 |
| chr1_2 | mRNA | 33179983 | 33182078 | 33179983 | ID=Msa0067870-mRNA-1;Parent=Msa0067870;Name=Msa0067870-mRNA-1;_AED=0.13;_eAED=0.13;_QI=210|0.6|0.66|1|1|1|6|423|207 |
| chr1_2 | exon | 33179983 | 33180327 | 33179983 | ID=Msa0067870-mRNA-1:exon:10879;Parent=Msa0067870-mRNA-1 |
| chr1_2 | exon | 33180588 | 33180664 | 33180588 | ID=Msa0067870-mRNA-1:exon:10880;Parent=Msa0067870-mRNA-1 |
| chr1_2 | exon | 33180774 | 33180829 | 33180774 | ID=Msa0067870-mRNA-1:exon:10881;Parent=Msa0067870-mRNA-1 |
| chr1_2 | exon | 33180927 | 33180970 | 33180927 | ID=Msa0067870-mRNA-1:exon:10882;Parent=Msa0067870-mRNA-1 |
| chr1_2 | exon | 33181062 | 33181151 | 33181062 | ID=Msa0067870-mRNA-1:exon:10883;Parent=Msa0067870-mRNA-1 |
| chr1_2 | exon | 33181434 | 33182078 | 33181434 | ID=Msa0067870-mRNA-1:exon:10884;Parent=Msa0067870-mRNA-1 |
| chr1_2 | five_prime_UTR | 33179983 | 33180192 | 33179983 | ID=Msa0067870-mRNA-1:five_prime_utr;Parent=Msa0067870-mRNA-1 |
| chr1_2 | CDS | 33180193 | 33180327 | 33180193 | ID=Msa0067870-mRNA-1:cds;Parent=Msa0067870-mRNA-1 |
| chr1_2 | CDS | 33180588 | 33180664 | 33180588 | ID=Msa0067870-mRNA-1:cds;Parent=Msa0067870-mRNA-1 |
| chr1_2 | CDS | 33180774 | 33180829 | 33180774 | ID=Msa0067870-mRNA-1:cds;Parent=Msa0067870-mRNA-1 |
| chr1_2 | CDS | 33180927 | 33180970 | 33180927 | ID=Msa0067870-mRNA-1:cds;Parent=Msa0067870-mRNA-1 |
| chr1_2 | CDS | 33181062 | 33181151 | 33181062 | ID=Msa0067870-mRNA-1:cds;Parent=Msa0067870-mRNA-1 |
| chr1_2 | CDS | 33181434 | 33181655 | 33181434 | ID=Msa0067870-mRNA-1:cds;Parent=Msa0067870-mRNA-1 |
| chr1_2 | three_prime_UTR | 33181656 | 33182078 | 33181656 | ID=Msa0067870-mRNA-1:three_prime_utr;Parent=Msa0067870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
