AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1186530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1186530 MtrunA17_Chr8g0353071 68.410 918 157 20 33 883 1229 2080 0.0 1111
Msa1186530 MtrunA17_Chr3g0134241 40.678 118 70 0 691 808 82 199 3.19e-25 104
Msa1186530 MtrunA17_Chr3g0133961 39.474 114 68 1 695 807 106 219 2.42e-23 99.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1186530 AT2G40030.1 42.523 214 92 5 677 865 1699 1906 4.88e-44 174
Msa1186530 AT3G46630.1 40.000 135 69 1 674 808 82 204 3.53e-26 107
Msa1186530 AT1G45230.1 40.351 114 68 0 695 808 101 214 7.51e-26 107
Msa1186530 AT1G45230.2 40.351 114 68 0 695 808 101 214 1.71e-25 105

Find 267 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACATCAGCTTTCCATTTA+AGG 0.150105 8_1:-24969517 None:intergenic
GCATTGTTGCCTCTTGTTCC+TGG 0.173426 8_1:+24967856 Msa1186530:CDS
CAGACTTTGAAGAGTCTTCT+TGG 0.197988 8_1:-24969388 None:intergenic
CATTCTGCGGCAAATATTTC+AGG 0.226188 8_1:+24971510 Msa1186530:CDS
GTCTGCTCCCCTGCTGGGTT+TGG 0.247472 8_1:-24971626 None:intergenic
GTCTGCTCCCCTGCTGGATT+TGG 0.249170 8_1:-24971596 None:intergenic
CTCTCAGAAGTCTGGTGCTT+GGG 0.251275 8_1:+24969682 Msa1186530:CDS
CTGAGTTTGTCGAGTCTTCT+TGG 0.256566 8_1:-24969541 None:intergenic
AGTTCTCAGCTTCAACTAAT+TGG 0.257733 8_1:-24971756 None:intergenic
CTCTTCAAAGTCTGGTGCTT+GGG 0.258710 8_1:+24968592 Msa1186530:CDS
CTCTTCAAAGTCTGGTGCTT+GGG 0.258710 8_1:+24968851 Msa1186530:CDS
GAGAGTCTGGTGGCCTTAAA+TGG 0.265257 8_1:+24969504 Msa1186530:CDS
CTCTTCAAAGTCCGGTGCTT+GGG 0.275759 8_1:+24968463 Msa1186530:CDS
CTCTTCAAAGTCCGGTGCTT+GGG 0.275759 8_1:+24968722 Msa1186530:CDS
GTCTGCTCCTCTGCTGGATT+TGG 0.291136 8_1:-24971686 None:intergenic
TAGACTTAGAAGAGTCTTCT+TGG 0.292568 8_1:-24968364 None:intergenic
AGTTTGATTTGACTCATTCT+TGG 0.294072 8_1:-24969882 None:intergenic
TTCATGATATCTTGCTCTTC+AGG 0.295925 8_1:-24970091 None:intergenic
AGAAGAAACAAATGCTTGTT+TGG 0.297335 8_1:+24968115 Msa1186530:CDS
GTCTGCTCCCCTGCTGGATT+TGG 0.299420 8_1:-24971566 None:intergenic
CAGACTTCTGAGAGTCTTCT+TGG 0.301842 8_1:-24969673 None:intergenic
GATCTGTTTGACGATGAAAA+TGG 0.304532 8_1:+24968152 Msa1186530:CDS
TGTTTACAGATTTCTCAATA+TGG 0.305709 8_1:+24968070 Msa1186530:CDS
AAAATAGTAATCAATCTTCT+TGG 0.306944 8_1:+24969276 Msa1186530:CDS
GTTGCAGTCTGCTCCCCTGC+TGG 0.317884 8_1:-24971632 None:intergenic
GCTGCAGTCTGCTCCCCTGC+TGG 0.320332 8_1:-24971602 None:intergenic
TCCATCTGGTGCAGCAGATT+TGG 0.321520 8_1:-24969147 None:intergenic
GTCCCTCTTTACACGAGGTT+GGG 0.322217 8_1:-24971537 None:intergenic
AAAATAGTGAGCAGCCTTCT+TGG 0.324379 8_1:+24968760 Msa1186530:CDS
CTATAAAAGTACAAGATTCT+TGG 0.325886 8_1:+24969615 Msa1186530:CDS
CTTCTGATTGACTGGACAAT+AGG 0.334798 8_1:-24970124 None:intergenic
CAGAGCAGAGAAGGCCAATT+GGG 0.339795 8_1:+24969328 Msa1186530:CDS
GTCTCACCCTCATGTACTTC+AGG 0.340624 8_1:-24969593 None:intergenic
ATCAAAGTAGTGATCGGCCT+TGG 0.349741 8_1:+24969120 Msa1186530:CDS
CTCTTCAAAGTCTAGCGCTT+GGG 0.351189 8_1:+24969085 Msa1186530:CDS
TGACCAGTCTGCTTCTGCTT+GGG 0.352665 8_1:+24968418 Msa1186530:CDS
TGACCAGTCTGCTTCTGCTT+GGG 0.352665 8_1:+24968547 Msa1186530:CDS
TGACCAGTCTGCTTCTGCTT+GGG 0.352665 8_1:+24968806 Msa1186530:CDS
CTCTTCTAAGTCTAGTGCTT+GGG 0.355078 8_1:+24968373 Msa1186530:CDS
AAATAGTAATCAATCTTCTT+GGG 0.357496 8_1:+24969277 Msa1186530:CDS
AAAATAGTGAGATGCCTTCT+TGG 0.358420 8_1:+24968501 Msa1186530:CDS
CATTGTTGCCTCTTGTTCCT+GGG 0.359074 8_1:+24967857 Msa1186530:CDS
CTCTTCAAAGTCTGGTGCTT+GGG 0.359132 8_1:+24969397 Msa1186530:CDS
CTCAAATGATTGGTCTGGTT+GGG 0.359524 8_1:+24968307 Msa1186530:CDS
CAAGAAGACTCTTCAAAATC+TGG 0.361231 8_1:+24969230 Msa1186530:CDS
AAATAGTGAGCAGCCTTCTT+GGG 0.364478 8_1:+24968761 Msa1186530:CDS
ACTCAGGTGGTTGGAAAGCT+TGG 0.364962 8_1:+24969558 Msa1186530:CDS
GGAAGGGCCCAAGGAGAGTC+TGG 0.368145 8_1:+24969491 Msa1186530:CDS
CTCTTCAAAGTCTAGTGCTT+GGG 0.369084 8_1:+24968929 Msa1186530:CDS
CTCTTCAAAGTCTAGTGCTT+GGG 0.369084 8_1:+24969007 Msa1186530:CDS
AATCACCAGAAAACCTATCT+TGG 0.373060 8_1:+24969855 Msa1186530:CDS
CCCCTGCTGGATTTGGCGTC+TGG 0.373738 8_1:-24971559 None:intergenic
ACTGCAGTCTGCTCCCCTGC+TGG 0.373804 8_1:-24971572 None:intergenic
TGGTCAAAGGCCTTGCCAAC+GGG 0.375326 8_1:+24968090 Msa1186530:CDS
CATTCTTGGACTCCCAAGAT+AGG 0.382953 8_1:-24969868 None:intergenic
CTCTTCAAAATCTGGTGCTT+GGG 0.385598 8_1:+24969238 Msa1186530:CDS
ATTCTTGGAACTCTCAGAAA+TGG 0.387249 8_1:+24969630 Msa1186530:CDS
TCGTGTTGGGGACAAATAAC+TGG 0.387970 8_1:+24969449 Msa1186530:CDS
AAATAGTGAGATGCCTTCTT+GGG 0.390627 8_1:+24968502 Msa1186530:CDS
GTTGAAGTCTGCTCCCCTGC+TGG 0.391991 8_1:-24971662 None:intergenic
TGCTCTTCAGGAGTGTATAA+AGG 0.399567 8_1:-24970079 None:intergenic
GTAGTGGTCTGCTCCTCTGC+TGG 0.402987 8_1:-24971692 None:intergenic
CTCAGGTGGTTGGAAAGCTT+GGG 0.406794 8_1:+24969559 Msa1186530:CDS
AAGTAGCGATTCATCGTGTT+GGG 0.409734 8_1:+24969436 Msa1186530:CDS
GGGGTCCAAATGCTGGGGAC+TGG 0.412727 8_1:+24970029 Msa1186530:CDS
AACCGAAGTCAAATGATAAT+AGG 0.421706 8_1:+24969714 Msa1186530:CDS
CAAGAAGACTCTTCAAAGTC+TGG 0.422107 8_1:+24969389 Msa1186530:CDS
TTGCATTGGTCTGATCAATC+TGG 0.423236 8_1:-24968283 None:intergenic
CCATTTGATGTTGAGCCATT+CGG 0.424629 8_1:-24968242 None:intergenic
TCAAAGTAGTGATCGGCCTT+GGG 0.426460 8_1:+24969121 Msa1186530:CDS
GTGTATAAAGGTGGTCTGGC+AGG 0.428287 8_1:-24970067 None:intergenic
GAAGAAACAAATGCTTGTTT+GGG 0.430404 8_1:+24968116 Msa1186530:CDS
GGTCCCTCTTTACACGAGGT+TGG 0.431327 8_1:-24971538 None:intergenic
TAAGGCCACCAGACTCTCCT+TGG 0.431410 8_1:-24969499 None:intergenic
CAAGAAGACTCTTCAAAGTC+TGG 0.431690 8_1:+24968584 Msa1186530:CDS
CAAGAAGACTCTTCAAAGTC+TGG 0.431690 8_1:+24968843 Msa1186530:CDS
ATCTGTTTGACGATGAAAAT+GGG 0.435550 8_1:+24968153 Msa1186530:CDS
CCGATCACTACTTTGATTTG+TGG 0.436882 8_1:-24969114 None:intergenic
ATCAAAATAGTGAGCAGCCT+TGG 0.438950 8_1:+24968886 Msa1186530:CDS
ATCAAAATAGTGAGCAGCCT+TGG 0.438950 8_1:+24968964 Msa1186530:CDS
ATCAAAATAGTGAGCAGCCT+TGG 0.438950 8_1:+24969042 Msa1186530:CDS
GAGAGCTCCCGGACTCCCAT+TGG 0.439622 8_1:-24969184 None:intergenic
GAGTCTTCTTGGATAGCATC+AGG 0.439697 8_1:-24969218 None:intergenic
GTGACCAGTCTGCTTCTGCT+TGG 0.440251 8_1:+24968417 Msa1186530:CDS
GTGACCAGTCTGCTTCTGCT+TGG 0.440251 8_1:+24968546 Msa1186530:CDS
GTGACCAGTCTGCTTCTGCT+TGG 0.440251 8_1:+24968805 Msa1186530:CDS
ATGTCCCCACAGCATGCCTC+TGG 0.442334 8_1:+24968185 Msa1186530:CDS
TTGCAGTCTGCTCCCCTGCT+GGG 0.443174 8_1:-24971631 None:intergenic
TCTTGGGGCAAGAAGAAATC+AGG 0.443780 8_1:+24969293 Msa1186530:CDS
CCGCAAGTGCCTGGAAAACT+TGG 0.445879 8_1:+24971457 Msa1186530:CDS
GCATGATTCTTCTGATTGAC+TGG 0.448789 8_1:-24970132 None:intergenic
GACCAGACGCCAAATCCAGC+AGG 0.450964 8_1:+24971557 Msa1186530:CDS
TTCAACTAATTGGTTTCCAT+TGG 0.454694 8_1:-24971746 None:intergenic
ACAGAGCAGAGAAGGCCAAT+TGG 0.455255 8_1:+24969327 Msa1186530:CDS
GATTCGAAGGTTCGCAAAGT+GGG 0.457077 8_1:+24970008 Msa1186530:CDS
TGTAAAGGACAGTTGGGTAT+GGG 0.459009 8_1:+24969823 Msa1186530:CDS
ATGTAAAGGACAGTTGGGTA+TGG 0.459951 8_1:+24969822 Msa1186530:CDS
CGGAAAATGTAAAGGACAGT+TGG 0.461857 8_1:+24969816 Msa1186530:CDS
ATCACCAGAAAACCTATCTT+GGG 0.467080 8_1:+24969856 Msa1186530:CDS
CTCTTCTAGATCTAATGCTT+GGG 0.469225 8_1:+24969784 Msa1186530:CDS
ACTCTTCAAAATCTGGTGCT+TGG 0.469362 8_1:+24969237 Msa1186530:CDS
AACTGCAGGTTCTCGTGGAT+GGG 0.473567 8_1:+24969901 Msa1186530:CDS
CCAATCATTTGAGTTTGCAT+TGG 0.473714 8_1:-24968297 None:intergenic
CCGAATGGCTCAACATCAAA+TGG 0.473958 8_1:+24968242 Msa1186530:CDS
TCTTGTGCTGCAGATTTCCA+AGG 0.475468 8_1:-24968903 None:intergenic
TCTTGTGCTGCAGATTTCCA+AGG 0.475468 8_1:-24968981 None:intergenic
TCTTGTGCTGCAGATTTCCA+AGG 0.475468 8_1:-24969059 None:intergenic
ACTCTTCTAGATCTAATGCT+TGG 0.476141 8_1:+24969783 Msa1186530:CDS
AAACTGCAGGTTCTCGTGGA+TGG 0.477365 8_1:+24969900 Msa1186530:CDS
TAATTGGTTTCCATTGGCAC+TGG 0.477763 8_1:-24971740 None:intergenic
CATTCTCTAGCACATACGTT+TGG 0.480118 8_1:-24970865 None:intergenic
ACTGCAGCTCCAAACCCAGC+AGG 0.483503 8_1:+24971617 Msa1186530:CDS
CAAGAAGACTCTCAGAAGTC+TGG 0.484443 8_1:+24969674 Msa1186530:CDS
ACTCAAATGATTGGTCTGGT+TGG 0.484968 8_1:+24968306 Msa1186530:CDS
AGCTCTCAAAAGTGGAAAGC+TGG 0.485208 8_1:+24969359 Msa1186530:CDS
CCAATGCAAACTCAAATGAT+TGG 0.485999 8_1:+24968297 Msa1186530:CDS
AACTCTCAGAAATGGAAAGC+TGG 0.486696 8_1:+24969638 Msa1186530:CDS
TTTCTTCTTCCCCGTTGGCA+AGG 0.488087 8_1:-24968100 None:intergenic
TGGCTCAACATCAAATGGTT+GGG 0.488788 8_1:+24968247 Msa1186530:CDS
TCTTCAAAGTCCGGTGCTTG+GGG 0.491694 8_1:+24968464 Msa1186530:CDS
TCTTCAAAGTCCGGTGCTTG+GGG 0.491694 8_1:+24968723 Msa1186530:CDS
GGAAAATGTAAAGGACAGTT+GGG 0.501977 8_1:+24969817 Msa1186530:CDS
TTAGATCTAGAAGAGTCTTC+CGG 0.502026 8_1:-24969776 None:intergenic
ACTCTTCAAAGTCCGGTGCT+TGG 0.502591 8_1:+24968462 Msa1186530:CDS
ACTCTTCAAAGTCCGGTGCT+TGG 0.502591 8_1:+24968721 Msa1186530:CDS
AAGGCCACCAGACTCTCCTT+GGG 0.502686 8_1:-24969498 None:intergenic
ATCGCTACTTTGATTTGTGT+TGG 0.503657 8_1:-24969423 None:intergenic
CTTGGTGAGGAAGAAATATC+CGG 0.504071 8_1:+24971475 Msa1186530:CDS
AAAGTAGCGATTCATCGTGT+TGG 0.506119 8_1:+24969435 Msa1186530:CDS
TCCCTCTTTACACGAGGTTG+GGG 0.506521 8_1:-24971536 None:intergenic
GAGCAGACCACTACACCAGC+CGG 0.508346 8_1:+24971701 Msa1186530:CDS
ACTCTTCAAAGTCTGGTGCT+TGG 0.510127 8_1:+24969396 Msa1186530:CDS
AGGAGTGTATAAAGGTGGTC+TGG 0.510302 8_1:-24970071 None:intergenic
TCAAATGATTGGTCTGGTTG+GGG 0.511232 8_1:+24968308 Msa1186530:CDS
AGAAGAATCATGCAACTACA+AGG 0.511508 8_1:+24970142 Msa1186530:CDS
CAAGAAGACTCTTCAAAGTC+CGG 0.512083 8_1:+24968455 Msa1186530:CDS
CAAGAAGACTCTTCAAAGTC+CGG 0.512083 8_1:+24968714 Msa1186530:CDS
ACTCTTCAAAGTCTGGTGCT+TGG 0.512922 8_1:+24968591 Msa1186530:CDS
ACTCTTCAAAGTCTGGTGCT+TGG 0.512922 8_1:+24968850 Msa1186530:CDS
TCTTCAAAGTCTGGTGCTTG+GGG 0.513791 8_1:+24968593 Msa1186530:CDS
TCTTCAAAGTCTGGTGCTTG+GGG 0.513791 8_1:+24968852 Msa1186530:CDS
GACCAGTCTGCTTCTGCTTG+GGG 0.514011 8_1:+24968419 Msa1186530:CDS
GACCAGTCTGCTTCTGCTTG+GGG 0.514011 8_1:+24968548 Msa1186530:CDS
GACCAGTCTGCTTCTGCTTG+GGG 0.514011 8_1:+24968807 Msa1186530:CDS
GGACAGTTGGGTATGGGGAA+AGG 0.514839 8_1:+24969829 Msa1186530:CDS
TCTTCTAAGTCTAGTGCTTG+GGG 0.515153 8_1:+24968374 Msa1186530:CDS
AACAAATGCTTGTTTGGGTG+AGG 0.515229 8_1:+24968121 Msa1186530:CDS
TCTCAGAAGTCTGGTGCTTG+GGG 0.515527 8_1:+24969683 Msa1186530:CDS
GAGGAAGAGGGAAGGGCCCA+AGG 0.516175 8_1:+24969482 Msa1186530:CDS
TGGAGCGCAAGCTGAGGAAG+AGG 0.516699 8_1:+24969469 Msa1186530:CDS
CGCAAGCTGAGGAAGAGGGA+AGG 0.520099 8_1:+24969474 Msa1186530:CDS
ACTCTCAGAAGTCTGGTGCT+TGG 0.522595 8_1:+24969681 Msa1186530:CDS
ATTTGTTTCTTCTTCCCCGT+TGG 0.522897 8_1:-24968105 None:intergenic
CAGAATGATTCAGCAGTCTC+CGG 0.524270 8_1:-24971494 None:intergenic
ATGGCTCAACATCAAATGGT+TGG 0.524360 8_1:+24968246 Msa1186530:CDS
TCTTCAAAGTCTAGCGCTTG+GGG 0.527881 8_1:+24969086 Msa1186530:CDS
GCAAGCTGAGGAAGAGGGAA+GGG 0.530412 8_1:+24969475 Msa1186530:CDS
GTTTGGTCTTCGTCAGCTAG+TGG 0.530629 8_1:-24970848 None:intergenic
AGACTTCTGAGAGTCTTCTT+GGG 0.531389 8_1:-24969672 None:intergenic
GTAAAGGACAGTTGGGTATG+GGG 0.532040 8_1:+24969824 Msa1186530:CDS
ACTCTTCTAAGTCTAGTGCT+TGG 0.532683 8_1:+24968372 Msa1186530:CDS
ACAAGATGACAGAGCAGAGA+AGG 0.532808 8_1:+24969319 Msa1186530:CDS
GCAAACTCAAATGATTGGTC+TGG 0.532900 8_1:+24968302 Msa1186530:CDS
AATGAGTCAAATCAAACTGC+AGG 0.534511 8_1:+24969887 Msa1186530:CDS
AGATGAAATACATGTTATGC+CGG 0.534633 8_1:+24969757 Msa1186530:CDS
TACCCCAAGCAGAAGCAGAC+TGG 0.534769 8_1:-24968421 None:intergenic
TACCCCAAGCAGAAGCAGAC+TGG 0.534769 8_1:-24968550 None:intergenic
TACCCCAAGCAGAAGCAGAC+TGG 0.534769 8_1:-24968809 None:intergenic
ACTCTTCAAAGTCTAGTGCT+TGG 0.536014 8_1:+24968928 Msa1186530:CDS
ACTCTTCAAAGTCTAGTGCT+TGG 0.536014 8_1:+24969006 Msa1186530:CDS
AGCAGACCACTACACCAGCC+GGG 0.536709 8_1:+24971702 Msa1186530:CDS
ACTCTTCAAAGTCTAGCGCT+TGG 0.538310 8_1:+24969084 Msa1186530:CDS
GACATCAACTCCAGTGCCAA+TGG 0.538480 8_1:+24971730 Msa1186530:CDS
AAAACACCCAATGGGAGTCC+GGG 0.542894 8_1:+24969177 Msa1186530:CDS
GACCTATTATCATTTGACTT+CGG 0.547101 8_1:-24969716 None:intergenic
ATTGTTGCCTCTTGTTCCTG+GGG 0.547667 8_1:+24967858 Msa1186530:CDS
CTGTGTGAAGGTACAATGAT+GGG 0.548489 8_1:+24970822 Msa1186530:intron
AACCCCAACCTCGTGTAAAG+AGG 0.549149 8_1:+24971534 Msa1186530:CDS
GTTGATGTCTGATCCCCGGC+TGG 0.549545 8_1:-24971716 None:intergenic
ACTGCAACTCAAAATCCAGC+AGG 0.549574 8_1:+24971647 Msa1186530:CDS
AGACAGCAGATGCTTGTATG+TGG 0.551002 8_1:+24971400 Msa1186530:CDS
TTCAAAGTCTGGTGCTTGGG+AGG 0.552206 8_1:+24969400 Msa1186530:CDS
AATAGTGAGCAGCCTTCTTG+GGG 0.554312 8_1:+24968762 Msa1186530:CDS
CTGATCCCCGGCTGGTGTAG+TGG 0.554903 8_1:-24971708 None:intergenic
AGATTTCTCAATATGGTCAA+AGG 0.556617 8_1:+24968077 Msa1186530:CDS
ACTGCAGTTCCAAATCCAGC+AGG 0.558288 8_1:+24971587 Msa1186530:CDS
ACTCGACAAACTCAGGTGGT+TGG 0.559827 8_1:+24969549 Msa1186530:CDS
CGATTCGAAGGTTCGCAAAG+TGG 0.562059 8_1:+24970007 Msa1186530:CDS
TTCTAAGTCTAGTGCTTGGG+GGG 0.562648 8_1:+24968376 Msa1186530:CDS
GGTCTGGAAGCTCTCAAAAG+TGG 0.564957 8_1:+24969351 Msa1186530:CDS
ATTCGAAGGTTCGCAAAGTG+GGG 0.566111 8_1:+24970009 Msa1186530:CDS
GCAGCAGATTTGGTGCCCCA+AGG 0.567841 8_1:-24969137 None:intergenic
CTGCAGCTCCAAACCCAGCA+GGG 0.567848 8_1:+24971618 Msa1186530:CDS
CAAGAAGACTCGACAAACTC+AGG 0.567856 8_1:+24969542 Msa1186530:CDS
TAATGCTTGGGAACAGAAGA+CGG 0.575410 8_1:+24969796 Msa1186530:CDS
CTTCAAAGTCTAGCGCTTGG+GGG 0.578104 8_1:+24969087 Msa1186530:CDS
CTTCTAAGTCTAGTGCTTGG+GGG 0.581284 8_1:+24968375 Msa1186530:CDS
TGTATAAAGGTGGTCTGGCA+GGG 0.581434 8_1:-24970066 None:intergenic
TCTTCAAAGTCTAGTGCTTG+GGG 0.581766 8_1:+24968930 Msa1186530:CDS
TCTTCAAAGTCTAGTGCTTG+GGG 0.581766 8_1:+24969008 Msa1186530:CDS
AATCAAACTGCAGGTTCTCG+TGG 0.583692 8_1:+24969896 Msa1186530:CDS
ATGGTCAAAGGCCTTGCCAA+CGG 0.583776 8_1:+24968089 Msa1186530:CDS
CCTGTGTGAAGGTACAATGA+TGG 0.584715 8_1:+24970821 Msa1186530:intron
ACCAGACGCCAAATCCAGCA+GGG 0.584776 8_1:+24971558 Msa1186530:CDS
CAAATCCAGAGGCATGCTGT+GGG 0.586208 8_1:-24968190 None:intergenic
ACCAAATCTGCTGCACCAGA+TGG 0.586929 8_1:+24969146 Msa1186530:CDS
AATAGTAATCAATCTTCTTG+GGG 0.589888 8_1:+24969278 Msa1186530:CDS
GGAGCGCAAGCTGAGGAAGA+GGG 0.590202 8_1:+24969470 Msa1186530:CDS
TTCAAAGTCTAGCGCTTGGG+GGG 0.591292 8_1:+24969088 Msa1186530:CDS
TCAGAAATGGAAAGCTGGAG+CGG 0.591366 8_1:+24969643 Msa1186530:CDS
TCAAATCCAGAGGCATGCTG+TGG 0.592053 8_1:-24968191 None:intergenic
AAATGATAATAGGTCCTCGT+GGG 0.592366 8_1:+24969724 Msa1186530:CDS
TGCAGCTCCAAACCCAGCAG+GGG 0.592962 8_1:+24971619 Msa1186530:CDS
ACAGAAGACGGAAAATGTAA+AGG 0.596565 8_1:+24969808 Msa1186530:CDS
ACCCCAACCTCGTGTAAAGA+GGG 0.596746 8_1:+24971535 Msa1186530:CDS
AGAGCAGAGAAGGCCAATTG+GGG 0.598667 8_1:+24969329 Msa1186530:CDS
TTCTGCTTGGGGTAAAGCTG+TGG 0.601809 8_1:+24968430 Msa1186530:CDS
TTCTGCTTGGGGTAAAGCTG+TGG 0.601809 8_1:+24968559 Msa1186530:CDS
TTCTGCTTGGGGTAAAGCTG+TGG 0.601809 8_1:+24968818 Msa1186530:CDS
AATAGTGAGATGCCTTCTTG+GGG 0.602089 8_1:+24968503 Msa1186530:CDS
CCACAAATCAAAGTAGTGAT+CGG 0.602870 8_1:+24969114 Msa1186530:CDS
AGGGCCCAAGGAGAGTCTGG+TGG 0.603565 8_1:+24969494 Msa1186530:CDS
CAGTAAACCTGAAGTACATG+AGG 0.603994 8_1:+24969586 Msa1186530:CDS
CTTCAAAGTCTGGTGCTTGG+GGG 0.606432 8_1:+24968594 Msa1186530:CDS
CTTCAAAGTCTGGTGCTTGG+GGG 0.606432 8_1:+24968853 Msa1186530:CDS
TGGAGTTGATGTCTGATCCC+CGG 0.612493 8_1:-24971720 None:intergenic
GTGCTTACCCCAGGAACAAG+AGG 0.613635 8_1:-24967865 None:intergenic
CTTCAAAGTCCGGTGCTTGG+GGG 0.615121 8_1:+24968465 Msa1186530:CDS
CTTCAAAGTCCGGTGCTTGG+GGG 0.615121 8_1:+24968724 Msa1186530:CDS
CAAAGTAGTGATCGGCCTTG+GGG 0.618758 8_1:+24969122 Msa1186530:CDS
AATAACTGGAGCGCAAGCTG+AGG 0.624122 8_1:+24969463 Msa1186530:CDS
TGTTGGAGTTGATCATGTCA+TGG 0.626408 8_1:+24970925 Msa1186530:CDS
GCAGACCACTACACCAGCCG+GGG 0.627649 8_1:+24971703 Msa1186530:CDS
TAGTGAGATGCCTTCTTGGG+GGG 0.629298 8_1:+24968505 Msa1186530:CDS
TTCGAAGGTTCGCAAAGTGG+GGG 0.631018 8_1:+24970010 Msa1186530:CDS
GTCGCTTTCAGAGTTAGCAG+AGG 0.632481 8_1:-24969936 None:intergenic
GTCTGGTCCCTCTTTACACG+AGG 0.633272 8_1:-24971542 None:intergenic
ACTTACAAAGAGTGTTGCAT+CGG 0.634764 8_1:-24967703 None:intergenic
CCAGACGCCAAATCCAGCAG+GGG 0.636456 8_1:+24971559 Msa1186530:CDS
TGAAGAGCAAGATATCATGA+AGG 0.639000 8_1:+24970093 Msa1186530:CDS
TCAGGTGGTTGGAAAGCTTG+GGG 0.639418 8_1:+24969560 Msa1186530:CDS
CTGCAACTCAAAATCCAGCA+GGG 0.639849 8_1:+24971648 Msa1186530:CDS
CAAATGATAATAGGTCCTCG+TGG 0.640051 8_1:+24969723 Msa1186530:CDS
CTGCAGTTCCAAATCCAGCA+GGG 0.640348 8_1:+24971588 Msa1186530:CDS
TAGTGAGCAGCCTTCTTGGG+GGG 0.644783 8_1:+24968764 Msa1186530:CDS
TGCAGTTCCAAATCCAGCAG+GGG 0.653071 8_1:+24971589 Msa1186530:CDS
TTCAACTCCAAATCCAGCAG+AGG 0.654957 8_1:+24971679 Msa1186530:CDS
GAAGAATCATGCAACTACAA+GGG 0.660400 8_1:+24970143 Msa1186530:CDS
ATAGTGAGATGCCTTCTTGG+GGG 0.660672 8_1:+24968504 Msa1186530:CDS
TGCAACTCAAAATCCAGCAG+GGG 0.668545 8_1:+24971649 Msa1186530:CDS
AGTGCCTGGAAAACTTGGTG+AGG 0.673739 8_1:+24971462 Msa1186530:CDS
ATAGTGAGCAGCCTTCTTGG+GGG 0.675435 8_1:+24968763 Msa1186530:CDS
TCTTCAGGAGTGTATAAAGG+TGG 0.678487 8_1:-24970076 None:intergenic
AAAGACAGCATCAAATCCAG+AGG 0.683572 8_1:-24968201 None:intergenic
AGTAGCGATTCATCGTGTTG+GGG 0.683959 8_1:+24969437 Msa1186530:CDS
CTTCAAAGTCTAGTGCTTGG+GGG 0.685305 8_1:+24968931 Msa1186530:CDS
CTTCAAAGTCTAGTGCTTGG+GGG 0.685305 8_1:+24969009 Msa1186530:CDS
GGTCAAAGGCCTTGCCAACG+GGG 0.687570 8_1:+24968091 Msa1186530:CDS
AATGATAATAGGTCCTCGTG+GGG 0.704285 8_1:+24969725 Msa1186530:CDS
GAAGACTCGACAAACTCAGG+TGG 0.707810 8_1:+24969545 Msa1186530:CDS
AGTAAACCTGAAGTACATGA+GGG 0.709062 8_1:+24969587 Msa1186530:CDS
GAGCAGAGAAGGCCAATTGG+GGG 0.711661 8_1:+24969330 Msa1186530:CDS
GAGACTGCTGAATCATTCTG+CGG 0.721077 8_1:+24971497 Msa1186530:CDS
AAATCCAGAGGCATGCTGTG+GGG 0.721126 8_1:-24968189 None:intergenic
TCTGTTTGACGATGAAAATG+GGG 0.721880 8_1:+24968154 Msa1186530:CDS
TGTGTGAAGGTACAATGATG+GGG 0.723770 8_1:+24970823 Msa1186530:intron
TGCTTGACAAAGAGTCTGAG+TGG 0.734019 8_1:-24967836 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCAAAATTTGATATTGTAT+GGG + chr8_1:24967905-24967924 Msa1186530:intron 15.0%
!!! ATTGTTTTAAATTTCAATGT+TGG + chr8_1:24968003-24968022 Msa1186530:intron 15.0%
!! ATAAAAACAAATGAAATTGA+AGG + chr8_1:24968041-24968060 Msa1186530:CDS 15.0%
!! TAAAAACAAATGAAATTGAA+GGG + chr8_1:24968042-24968061 Msa1186530:CDS 15.0%
!!! TCAACACTTTTTTATAATAT+GGG - chr8_1:24970448-24970467 None:intergenic 15.0%
!!! TTCAACACTTTTTTATAATA+TGG - chr8_1:24970449-24970468 None:intergenic 15.0%
!!! TTTCTTTTCTTTTTTAATGT+TGG + chr8_1:24971336-24971355 Msa1186530:intron 15.0%
!!! TTCTTTTCTTTTTTAATGTT+GGG + chr8_1:24971337-24971356 Msa1186530:intron 15.0%
!! GATCAAAATTTGATATTGTA+TGG + chr8_1:24967904-24967923 Msa1186530:intron 20.0%
!! TTGATTAAACTCAGATTTAA+TGG + chr8_1:24967943-24967962 Msa1186530:intron 20.0%
!! AAAATAGTAATCAATCTTCT+TGG + chr8_1:24969276-24969295 Msa1186530:CDS 20.0%
!! AAATAGTAATCAATCTTCTT+GGG + chr8_1:24969277-24969296 Msa1186530:CDS 20.0%
!! AGCAAAATAGTTTATAAAAG+AGG - chr8_1:24970570-24970589 None:intergenic 20.0%
!! AATTTATCATCAGAACAATA+AGG - chr8_1:24970801-24970820 None:intergenic 20.0%
!! AAAAGAAACTAATTTATCAC+AGG - chr8_1:24971019-24971038 None:intergenic 20.0%
!! AGAAAAGAAAAATATAGAGA+TGG - chr8_1:24971169-24971188 None:intergenic 20.0%
! GTTTAATCAAATACCTCTTT+CGG - chr8_1:24967933-24967952 None:intergenic 25.0%
! ATTAAACTCAGATTTAATGG+TGG + chr8_1:24967946-24967965 Msa1186530:intron 25.0%
!!! TCATTTGTTTTTATCTGCAA+AGG - chr8_1:24968035-24968054 None:intergenic 25.0%
! TGTTTACAGATTTCTCAATA+TGG + chr8_1:24968070-24968089 Msa1186530:CDS 25.0%
! AATAGTAATCAATCTTCTTG+GGG + chr8_1:24969278-24969297 Msa1186530:CDS 25.0%
!! CTATAAAAGTACAAGATTCT+TGG + chr8_1:24969615-24969634 Msa1186530:CDS 25.0%
!!! TTTAAGAAAAATCGATTCGA+AGG + chr8_1:24969995-24970014 Msa1186530:CDS 25.0%
! TGCTTAATTATTGCTTTATG+TGG + chr8_1:24970205-24970224 Msa1186530:intron 25.0%
! ATGGGTTCCATATATATATT+TGG + chr8_1:24970417-24970436 Msa1186530:intron 25.0%
! GTTCCATATATATATTTGGT+GGG + chr8_1:24970421-24970440 Msa1186530:intron 25.0%
! AGTTTATAAAAGAGGCAAAA+AGG - chr8_1:24970562-24970581 None:intergenic 25.0%
! TCAGAACAATAAGGTAAAAA+TGG - chr8_1:24970792-24970811 None:intergenic 25.0%
! TCCTGATAAAGAAACAAAAA+TGG + chr8_1:24970901-24970920 Msa1186530:CDS 25.0%
! CCTGATAAAGAAACAAAAAT+GGG + chr8_1:24970902-24970921 Msa1186530:CDS 25.0%
! AAGTATATTACAGATGTTCA+TGG - chr8_1:24970985-24971004 None:intergenic 25.0%
! TCTGTAATATACTTCATCAT+AGG + chr8_1:24970991-24971010 Msa1186530:intron 25.0%
!!! GACTGAATGATGTTTTATTT+TGG + chr8_1:24971050-24971069 Msa1186530:intron 25.0%
!!! TATACAGGTTTTGTATCAAA+AGG - chr8_1:24971082-24971101 None:intergenic 25.0%
!!! TATACAGGTTTTGTATCAAA+AGG - chr8_1:24971082-24971101 None:intergenic 25.0%
!!! TTTTCTTTTTTAATGTTGGG+AGG + chr8_1:24971340-24971359 Msa1186530:intron 25.0%
!!! TTGTATGTGGTTTTAAAAGA+TGG + chr8_1:24971413-24971432 Msa1186530:CDS 25.0%
!!! GGTTTTAAAAGATGGTAAAA+AGG + chr8_1:24971421-24971440 Msa1186530:CDS 25.0%
AGATTTCTCAATATGGTCAA+AGG + chr8_1:24968077-24968096 Msa1186530:CDS 30.0%
AGAAGAAACAAATGCTTGTT+TGG + chr8_1:24968115-24968134 Msa1186530:CDS 30.0%
GAAGAAACAAATGCTTGTTT+GGG + chr8_1:24968116-24968135 Msa1186530:CDS 30.0%
ATCTGTTTGACGATGAAAAT+GGG + chr8_1:24968153-24968172 Msa1186530:CDS 30.0%
!!! CATCTCACTATTTTGATTAG+TGG - chr8_1:24968495-24968514 None:intergenic 30.0%
!!! ATGCTCACTATTTTGATTAG+TGG - chr8_1:24968624-24968643 None:intergenic 30.0%
TAACATCAGCTTTCCATTTA+AGG - chr8_1:24969520-24969539 None:intergenic 30.0%
AACCGAAGTCAAATGATAAT+AGG + chr8_1:24969714-24969733 Msa1186530:CDS 30.0%
! GACCTATTATCATTTGACTT+CGG - chr8_1:24969719-24969738 None:intergenic 30.0%
AGATGAAATACATGTTATGC+CGG + chr8_1:24969757-24969776 Msa1186530:CDS 30.0%
!! AGTTTGATTTGACTCATTCT+TGG - chr8_1:24969885-24969904 None:intergenic 30.0%
!!! ACGTTTTTTACAGTAGGAAA+AGG - chr8_1:24970257-24970276 None:intergenic 30.0%
AAAACAGATATGACACCAAA+AGG - chr8_1:24970306-24970325 None:intergenic 30.0%
GGTTCCATATATATATTTGG+TGG + chr8_1:24970420-24970439 Msa1186530:intron 30.0%
! GTATAACTTGCAACTTCTTA+AGG + chr8_1:24970513-24970532 Msa1186530:intron 30.0%
AATGGTATCATATTCAGAAG+AGG - chr8_1:24970624-24970643 None:intergenic 30.0%
ATGATAGCTATCATAGCTAA+TGG - chr8_1:24970642-24970661 None:intergenic 30.0%
!! CCCATTTTTGTTTCTTTATC+AGG - chr8_1:24970905-24970924 None:intergenic 30.0%
AAAGAAACAAAAATGGGTGT+TGG + chr8_1:24970908-24970927 Msa1186530:CDS 30.0%
GCATAAACTGAAACATATAC+AGG - chr8_1:24971097-24971116 None:intergenic 30.0%
TTAATGTTGAGACTGAATGA+TGG + chr8_1:24971194-24971213 Msa1186530:intron 30.0%
! GACTGAATGATGGTTTATTT+TGG + chr8_1:24971204-24971223 Msa1186530:intron 30.0%
GCATAAACTGAAACATATAC+AGG - chr8_1:24971097-24971116 None:intergenic 30.0%
AACACTCTTTGTAAGTGCTT+TGG + chr8_1:24967710-24967729 Msa1186530:intron 35.0%
! GACTTCAATATGTCTAGAGT+TGG + chr8_1:24967968-24967987 Msa1186530:intron 35.0%
GATCTGTTTGACGATGAAAA+TGG + chr8_1:24968152-24968171 Msa1186530:CDS 35.0%
TCTGTTTGACGATGAAAATG+GGG + chr8_1:24968154-24968173 Msa1186530:CDS 35.0%
! CCAATCATTTGAGTTTGCAT+TGG - chr8_1:24968300-24968319 None:intergenic 35.0%
CCAATGCAAACTCAAATGAT+TGG + chr8_1:24968297-24968316 Msa1186530:CDS 35.0%
TAGACTTAGAAGAGTCTTCT+TGG - chr8_1:24968367-24968386 None:intergenic 35.0%
AAAATAGTGAGATGCCTTCT+TGG + chr8_1:24968501-24968520 Msa1186530:CDS 35.0%
AAATAGTGAGATGCCTTCTT+GGG + chr8_1:24968502-24968521 Msa1186530:CDS 35.0%
!!! CTGCTCACTATTTTGATTAG+TGG - chr8_1:24968754-24968773 None:intergenic 35.0%
!!! CTGCTCACTATTTTGATTAG+TGG - chr8_1:24968754-24968773 None:intergenic 35.0%
!!! CTGCTCACTATTTTGATTAG+TGG - chr8_1:24968754-24968773 None:intergenic 35.0%
!!! CTGCTCACTATTTTGATTAG+TGG - chr8_1:24968754-24968773 None:intergenic 35.0%
CCACAAATCAAAGTAGTGAT+CGG + chr8_1:24969114-24969133 Msa1186530:CDS 35.0%
AGCAGTTAAAAACACCCAAT+GGG + chr8_1:24969169-24969188 Msa1186530:CDS 35.0%
!! CAGATTTTGAAGAGTCTTCT+TGG - chr8_1:24969232-24969251 None:intergenic 35.0%
CAAGAAGACTCTTCAAAATC+TGG + chr8_1:24969230-24969249 Msa1186530:CDS 35.0%
!! ATCGCTACTTTGATTTGTGT+TGG - chr8_1:24969426-24969445 None:intergenic 35.0%
AGTAAACCTGAAGTACATGA+GGG + chr8_1:24969587-24969606 Msa1186530:CDS 35.0%
ATTCTTGGAACTCTCAGAAA+TGG + chr8_1:24969630-24969649 Msa1186530:CDS 35.0%
AAATGATAATAGGTCCTCGT+GGG + chr8_1:24969724-24969743 Msa1186530:CDS 35.0%
TTAGATCTAGAAGAGTCTTC+CGG - chr8_1:24969779-24969798 None:intergenic 35.0%
ACTCTTCTAGATCTAATGCT+TGG + chr8_1:24969783-24969802 Msa1186530:CDS 35.0%
CTCTTCTAGATCTAATGCTT+GGG + chr8_1:24969784-24969803 Msa1186530:CDS 35.0%
ACAGAAGACGGAAAATGTAA+AGG + chr8_1:24969808-24969827 Msa1186530:CDS 35.0%
GGAAAATGTAAAGGACAGTT+GGG + chr8_1:24969817-24969836 Msa1186530:CDS 35.0%
AATCACCAGAAAACCTATCT+TGG + chr8_1:24969855-24969874 Msa1186530:CDS 35.0%
ATCACCAGAAAACCTATCTT+GGG + chr8_1:24969856-24969875 Msa1186530:CDS 35.0%
AATGAGTCAAATCAAACTGC+AGG + chr8_1:24969887-24969906 Msa1186530:CDS 35.0%
! AAAGCGACAGAAGTTTTCAA+TGG + chr8_1:24969951-24969970 Msa1186530:CDS 35.0%
! AAGCGACAGAAGTTTTCAAT+GGG + chr8_1:24969952-24969971 Msa1186530:CDS 35.0%
! AGTTTTCAATGGGGAAAACA+AGG + chr8_1:24969962-24969981 Msa1186530:CDS 35.0%
TTCATGATATCTTGCTCTTC+AGG - chr8_1:24970094-24970113 None:intergenic 35.0%
TGAAGAGCAAGATATCATGA+AGG + chr8_1:24970093-24970112 Msa1186530:CDS 35.0%
AGAAGAATCATGCAACTACA+AGG + chr8_1:24970142-24970161 Msa1186530:CDS 35.0%
GAAGAATCATGCAACTACAA+GGG + chr8_1:24970143-24970162 Msa1186530:CDS 35.0%
ATTAAGCATGAGAGTTTGCA+CGG - chr8_1:24970193-24970212 None:intergenic 35.0%
TTTACTTGCTCATTGCAAAG+TGG + chr8_1:24970323-24970342 Msa1186530:intron 35.0%
TTACTTGCTCATTGCAAAGT+GGG + chr8_1:24970324-24970343 Msa1186530:intron 35.0%
! TAACCAACAAAAGAGTGTGT+TGG - chr8_1:24970370-24970389 None:intergenic 35.0%
TATATGGAACCCATATGCAT+TGG - chr8_1:24970411-24970430 None:intergenic 35.0%
GGTCCCACCAAATATATATA+TGG - chr8_1:24970427-24970446 None:intergenic 35.0%
AAAAAGGCTCCTTCAAAGAA+AGG - chr8_1:24970546-24970565 None:intergenic 35.0%
AGTAACATGCAGAAGAATCA+CGG - chr8_1:24970601-24970620 None:intergenic 35.0%
ATAGCTATCATTCCCTAGTA+TGG + chr8_1:24970651-24970670 Msa1186530:intron 35.0%
GTAAAAATGGAGCAGTTTGT+GGG - chr8_1:24970779-24970798 None:intergenic 35.0%
GATGATAAATTCCTGTGTGA+AGG + chr8_1:24970810-24970829 Msa1186530:intron 35.0%
AGGCAAGGATATAGAATTAG+AGG - chr8_1:24970954-24970973 None:intergenic 35.0%
AGATGTTCATGGAAGCTAAA+AGG - chr8_1:24970974-24970993 None:intergenic 35.0%
!! GCTCTTTCAAAGCATTTTCG+AGG - chr8_1:24967804-24967823 None:intergenic 40.0%
TATTGTATGGGATCCGAAAG+AGG + chr8_1:24967917-24967936 Msa1186530:intron 40.0%
! ATTTGTTTCTTCTTCCCCGT+TGG - chr8_1:24968108-24968127 None:intergenic 40.0%
AACAAATGCTTGTTTGGGTG+AGG + chr8_1:24968121-24968140 Msa1186530:CDS 40.0%
AAAGACAGCATCAAATCCAG+AGG - chr8_1:24968204-24968223 None:intergenic 40.0%
! GAGACTTTTGAACTTCCGAA+TGG + chr8_1:24968227-24968246 Msa1186530:CDS 40.0%
CCATTTGATGTTGAGCCATT+CGG - chr8_1:24968245-24968264 None:intergenic 40.0%
ATGGCTCAACATCAAATGGT+TGG + chr8_1:24968246-24968265 Msa1186530:CDS 40.0%
TGGCTCAACATCAAATGGTT+GGG + chr8_1:24968247-24968266 Msa1186530:CDS 40.0%
! TTGCATTGGTCTGATCAATC+TGG - chr8_1:24968286-24968305 None:intergenic 40.0%
! GCAAACTCAAATGATTGGTC+TGG + chr8_1:24968302-24968321 Msa1186530:CDS 40.0%
!! ACTCAAATGATTGGTCTGGT+TGG + chr8_1:24968306-24968325 Msa1186530:CDS 40.0%
!! CTCAAATGATTGGTCTGGTT+GGG + chr8_1:24968307-24968326 Msa1186530:CDS 40.0%
!! TCAAATGATTGGTCTGGTTG+GGG + chr8_1:24968308-24968327 Msa1186530:CDS 40.0%
ACTCTTCTAAGTCTAGTGCT+TGG + chr8_1:24968372-24968391 Msa1186530:CDS 40.0%
CTCTTCTAAGTCTAGTGCTT+GGG + chr8_1:24968373-24968392 Msa1186530:CDS 40.0%
TCTTCTAAGTCTAGTGCTTG+GGG + chr8_1:24968374-24968393 Msa1186530:CDS 40.0%
CAAGAAGACTCTTCAAAGTC+CGG + chr8_1:24968455-24968474 Msa1186530:CDS 40.0%
AATAGTGAGATGCCTTCTTG+GGG + chr8_1:24968503-24968522 Msa1186530:CDS 40.0%
CAAGAAGACTCTTCAAAGTC+TGG + chr8_1:24968455-24968474 Msa1186530:CDS 40.0%
AAATAGTGAGCATGCCTTCT+TGG + chr8_1:24968631-24968650 Msa1186530:intron 40.0%
AATAGTGAGCATGCCTTCTT+GGG + chr8_1:24968632-24968651 Msa1186530:intron 40.0%
CAAGAAGACTCTTCAAAGTC+CGG + chr8_1:24968455-24968474 Msa1186530:CDS 40.0%
AAAATAGTGAGCAGCCTTCT+TGG + chr8_1:24968760-24968779 Msa1186530:CDS 40.0%
AAATAGTGAGCAGCCTTCTT+GGG + chr8_1:24968761-24968780 Msa1186530:CDS 40.0%
CAAGAAGACTCTTCAAAGTC+TGG + chr8_1:24968455-24968474 Msa1186530:CDS 40.0%
ATCAAAATAGTGAGCAGCCT+TGG + chr8_1:24968757-24968776 Msa1186530:CDS 40.0%
ACTCTTCAAAGTCTAGTGCT+TGG + chr8_1:24968928-24968947 Msa1186530:CDS 40.0%
CTCTTCAAAGTCTAGTGCTT+GGG + chr8_1:24968929-24968948 Msa1186530:CDS 40.0%
TCTTCAAAGTCTAGTGCTTG+GGG + chr8_1:24968930-24968949 Msa1186530:CDS 40.0%
ATCAAAATAGTGAGCAGCCT+TGG + chr8_1:24968757-24968776 Msa1186530:CDS 40.0%
ACTCTTCAAAGTCTAGTGCT+TGG + chr8_1:24968928-24968947 Msa1186530:CDS 40.0%
CTCTTCAAAGTCTAGTGCTT+GGG + chr8_1:24968929-24968948 Msa1186530:CDS 40.0%
TCTTCAAAGTCTAGTGCTTG+GGG + chr8_1:24968930-24968949 Msa1186530:CDS 40.0%
ATCAAAATAGTGAGCAGCCT+TGG + chr8_1:24968757-24968776 Msa1186530:CDS 40.0%
!! CCGATCACTACTTTGATTTG+TGG - chr8_1:24969117-24969136 None:intergenic 40.0%
!! GTGTTTTTAACTGCTCCATC+TGG - chr8_1:24969164-24969183 None:intergenic 40.0%
GAGCAGTTAAAAACACCCAA+TGG + chr8_1:24969168-24969187 Msa1186530:CDS 40.0%
!! TTTCCATTTTTGAGAGCTCC+CGG - chr8_1:24969198-24969217 None:intergenic 40.0%
ACTCTTCAAAATCTGGTGCT+TGG + chr8_1:24969237-24969256 Msa1186530:CDS 40.0%
CTCTTCAAAATCTGGTGCTT+GGG + chr8_1:24969238-24969257 Msa1186530:CDS 40.0%
! CAGACTTTGAAGAGTCTTCT+TGG - chr8_1:24968586-24968605 None:intergenic 40.0%
CAAGAAGACTCTTCAAAGTC+TGG + chr8_1:24968455-24968474 Msa1186530:CDS 40.0%
AAAGTAGCGATTCATCGTGT+TGG + chr8_1:24969435-24969454 Msa1186530:CDS 40.0%
AAGTAGCGATTCATCGTGTT+GGG + chr8_1:24969436-24969455 Msa1186530:CDS 40.0%
CAGTAAACCTGAAGTACATG+AGG + chr8_1:24969586-24969605 Msa1186530:CDS 40.0%
AACTCTCAGAAATGGAAAGC+TGG + chr8_1:24969638-24969657 Msa1186530:CDS 40.0%
! AGACTTCTGAGAGTCTTCTT+GGG - chr8_1:24969675-24969694 None:intergenic 40.0%
CAAATGATAATAGGTCCTCG+TGG + chr8_1:24969723-24969742 Msa1186530:CDS 40.0%
AATGATAATAGGTCCTCGTG+GGG + chr8_1:24969725-24969744 Msa1186530:CDS 40.0%
TAATGCTTGGGAACAGAAGA+CGG + chr8_1:24969796-24969815 Msa1186530:CDS 40.0%
CGGAAAATGTAAAGGACAGT+TGG + chr8_1:24969816-24969835 Msa1186530:CDS 40.0%
ATGTAAAGGACAGTTGGGTA+TGG + chr8_1:24969822-24969841 Msa1186530:CDS 40.0%
TGTAAAGGACAGTTGGGTAT+GGG + chr8_1:24969823-24969842 Msa1186530:CDS 40.0%
! AGCGACAGAAGTTTTCAATG+GGG + chr8_1:24969953-24969972 Msa1186530:CDS 40.0%
! TCTTCAGGAGTGTATAAAGG+TGG - chr8_1:24970079-24970098 None:intergenic 40.0%
! TGCTCTTCAGGAGTGTATAA+AGG - chr8_1:24970082-24970101 None:intergenic 40.0%
CTTCTGATTGACTGGACAAT+AGG - chr8_1:24970127-24970146 None:intergenic 40.0%
GCATGATTCTTCTGATTGAC+TGG - chr8_1:24970135-24970154 None:intergenic 40.0%
CAAGCATAACCAGAGAATAG+GGG - chr8_1:24970282-24970301 None:intergenic 40.0%
CCAAGCATAACCAGAGAATA+GGG - chr8_1:24970283-24970302 None:intergenic 40.0%
TACTTGCTCATTGCAAAGTG+GGG + chr8_1:24970325-24970344 Msa1186530:intron 40.0%
! CTTCCAACACACTCTTTTGT+TGG + chr8_1:24970364-24970383 Msa1186530:intron 40.0%
ATTGTTCCCACCAATGCATA+TGG + chr8_1:24970398-24970417 Msa1186530:intron 40.0%
TTGTTCCCACCAATGCATAT+GGG + chr8_1:24970399-24970418 Msa1186530:intron 40.0%
!! GGTGTCATTCCTTTCTTTGA+AGG + chr8_1:24970534-24970553 Msa1186530:intron 40.0%
GCACAGGAAATACCATACTA+GGG - chr8_1:24970666-24970685 None:intergenic 40.0%
TGCACAGGAAATACCATACT+AGG - chr8_1:24970667-24970686 None:intergenic 40.0%
TATGGTATTTCCTGTGCAGA+AGG + chr8_1:24970669-24970688 Msa1186530:intron 40.0%
TGTGCAGAAGGTTGCATTAT+GGG + chr8_1:24970681-24970700 Msa1186530:intron 40.0%
GGTAAAAATGGAGCAGTTTG+TGG - chr8_1:24970780-24970799 None:intergenic 40.0%
! CTGTGTGAAGGTACAATGAT+GGG + chr8_1:24970822-24970841 Msa1186530:intron 40.0%
! TGTGTGAAGGTACAATGATG+GGG + chr8_1:24970823-24970842 Msa1186530:intron 40.0%
CATTCTCTAGCACATACGTT+TGG - chr8_1:24970868-24970887 None:intergenic 40.0%
! TGTTGGAGTTGATCATGTCA+TGG + chr8_1:24970925-24970944 Msa1186530:CDS 40.0%
TTCATGGAAGCTAAAAGGCA+AGG - chr8_1:24970969-24970988 None:intergenic 40.0%
TTTAATGTTGGGAGGACTTG+TGG + chr8_1:24971348-24971367 Msa1186530:intron 40.0%
CTTGGTGAGGAAGAAATATC+CGG + chr8_1:24971475-24971494 Msa1186530:CDS 40.0%
CATTCTGCGGCAAATATTTC+AGG + chr8_1:24971510-24971529 Msa1186530:CDS 40.0%
! TAATTGGTTTCCATTGGCAC+TGG - chr8_1:24971743-24971762 None:intergenic 40.0%
TGCTTGACAAAGAGTCTGAG+TGG - chr8_1:24967839-24967858 None:intergenic 45.0%
CATTGTTGCCTCTTGTTCCT+GGG + chr8_1:24967857-24967876 Msa1186530:CDS 45.0%
ATTGTTGCCTCTTGTTCCTG+GGG + chr8_1:24967858-24967877 Msa1186530:CDS 45.0%
CCGAATGGCTCAACATCAAA+TGG + chr8_1:24968242-24968261 Msa1186530:CDS 45.0%
CTTCTAAGTCTAGTGCTTGG+GGG + chr8_1:24968375-24968394 Msa1186530:CDS 45.0%
TTCTAAGTCTAGTGCTTGGG+GGG + chr8_1:24968376-24968395 Msa1186530:CDS 45.0%
ATAGTGAGATGCCTTCTTGG+GGG + chr8_1:24968504-24968523 Msa1186530:CDS 45.0%
ACTCTTCAAAGTCTGGTGCT+TGG + chr8_1:24968591-24968610 Msa1186530:CDS 45.0%
CTCTTCAAAGTCTGGTGCTT+GGG + chr8_1:24968592-24968611 Msa1186530:CDS 45.0%
TCTTCAAAGTCTGGTGCTTG+GGG + chr8_1:24968593-24968612 Msa1186530:CDS 45.0%
ATAGTGAGCATGCCTTCTTG+GGG + chr8_1:24968633-24968652 Msa1186530:intron 45.0%
AATAGTGAGCAGCCTTCTTG+GGG + chr8_1:24968762-24968781 Msa1186530:CDS 45.0%
ACTCTTCAAAGTCTGGTGCT+TGG + chr8_1:24968591-24968610 Msa1186530:CDS 45.0%
CTCTTCAAAGTCTGGTGCTT+GGG + chr8_1:24968592-24968611 Msa1186530:CDS 45.0%
TCTTCAAAGTCTGGTGCTTG+GGG + chr8_1:24968593-24968612 Msa1186530:CDS 45.0%
TCTTGTGCTGCAGATTTCCA+AGG - chr8_1:24968906-24968925 None:intergenic 45.0%
CTTCAAAGTCTAGTGCTTGG+GGG + chr8_1:24968931-24968950 Msa1186530:CDS 45.0%
TCTTGTGCTGCAGATTTCCA+AGG - chr8_1:24968906-24968925 None:intergenic 45.0%
CTTCAAAGTCTAGTGCTTGG+GGG + chr8_1:24968931-24968950 Msa1186530:CDS 45.0%
TCTTGTGCTGCAGATTTCCA+AGG - chr8_1:24968906-24968925 None:intergenic 45.0%
ACTCTTCAAAGTCTAGCGCT+TGG + chr8_1:24969084-24969103 Msa1186530:CDS 45.0%
CTCTTCAAAGTCTAGCGCTT+GGG + chr8_1:24969085-24969104 Msa1186530:CDS 45.0%
TCTTCAAAGTCTAGCGCTTG+GGG + chr8_1:24969086-24969105 Msa1186530:CDS 45.0%
ATCAAAGTAGTGATCGGCCT+TGG + chr8_1:24969120-24969139 Msa1186530:CDS 45.0%
TCAAAGTAGTGATCGGCCTT+GGG + chr8_1:24969121-24969140 Msa1186530:CDS 45.0%
AAAAACACCCAATGGGAGTC+CGG + chr8_1:24969176-24969195 Msa1186530:CDS 45.0%
GAGTCTTCTTGGATAGCATC+AGG - chr8_1:24969221-24969240 None:intergenic 45.0%
TCTTGGGGCAAGAAGAAATC+AGG + chr8_1:24969293-24969312 Msa1186530:CDS 45.0%
ACAAGATGACAGAGCAGAGA+AGG + chr8_1:24969319-24969338 Msa1186530:CDS 45.0%
AGCTCTCAAAAGTGGAAAGC+TGG + chr8_1:24969359-24969378 Msa1186530:CDS 45.0%
ACTCTTCAAAGTCTGGTGCT+TGG + chr8_1:24968591-24968610 Msa1186530:CDS 45.0%
CTCTTCAAAGTCTGGTGCTT+GGG + chr8_1:24968592-24968611 Msa1186530:CDS 45.0%
AGTAGCGATTCATCGTGTTG+GGG + chr8_1:24969437-24969456 Msa1186530:CDS 45.0%
TCGTGTTGGGGACAAATAAC+TGG + chr8_1:24969449-24969468 Msa1186530:CDS 45.0%
CTGAGTTTGTCGAGTCTTCT+TGG - chr8_1:24969544-24969563 None:intergenic 45.0%
CAAGAAGACTCGACAAACTC+AGG + chr8_1:24969542-24969561 Msa1186530:CDS 45.0%
TCAGAAATGGAAAGCTGGAG+CGG + chr8_1:24969643-24969662 Msa1186530:CDS 45.0%
! CAGACTTCTGAGAGTCTTCT+TGG - chr8_1:24969676-24969695 None:intergenic 45.0%
CAAGAAGACTCTCAGAAGTC+TGG + chr8_1:24969674-24969693 Msa1186530:CDS 45.0%
!!! ATCTTTTTTCTGTCCCCACG+AGG - chr8_1:24969741-24969760 None:intergenic 45.0%
GTAAAGGACAGTTGGGTATG+GGG + chr8_1:24969824-24969843 Msa1186530:CDS 45.0%
! GACTCCCAAGATAGGTTTTC+TGG - chr8_1:24969863-24969882 None:intergenic 45.0%
CATTCTTGGACTCCCAAGAT+AGG - chr8_1:24969871-24969890 None:intergenic 45.0%
AATCAAACTGCAGGTTCTCG+TGG + chr8_1:24969896-24969915 Msa1186530:CDS 45.0%
GATTCGAAGGTTCGCAAAGT+GGG + chr8_1:24970008-24970027 Msa1186530:CDS 45.0%
ATTCGAAGGTTCGCAAAGTG+GGG + chr8_1:24970009-24970028 Msa1186530:CDS 45.0%
! TTTTTCCAGTCCCCAGCATT+TGG - chr8_1:24970037-24970056 None:intergenic 45.0%
TGTATAAAGGTGGTCTGGCA+GGG - chr8_1:24970069-24970088 None:intergenic 45.0%
! AGGAGTGTATAAAGGTGGTC+TGG - chr8_1:24970074-24970093 None:intergenic 45.0%
CTACAAGGGTAAGTTTCCCA+AGG + chr8_1:24970157-24970176 Msa1186530:intron 45.0%
CCCTATTCTCTGGTTATGCT+TGG + chr8_1:24970280-24970299 Msa1186530:intron 45.0%
GCCAAGCATAACCAGAGAAT+AGG - chr8_1:24970284-24970303 None:intergenic 45.0%
!! TCTGGTTATGCTTGGCCTTT+TGG + chr8_1:24970288-24970307 Msa1186530:intron 45.0%
ACTTGCTCATTGCAAAGTGG+GGG + chr8_1:24970326-24970345 Msa1186530:intron 45.0%
! AGAGTGTGTTGGAAGTGTGT+TGG - chr8_1:24970359-24970378 None:intergenic 45.0%
! TGGAACCCATATGCATTGGT+GGG - chr8_1:24970407-24970426 None:intergenic 45.0%
ATGGAACCCATATGCATTGG+TGG - chr8_1:24970408-24970427 None:intergenic 45.0%
AACATGCAGAAGAATCACGG+TGG - chr8_1:24970598-24970617 None:intergenic 45.0%
CATAATGCAACCTTCTGCAC+AGG - chr8_1:24970682-24970701 None:intergenic 45.0%
CTGTGCAGAAGGTTGCATTA+TGG + chr8_1:24970680-24970699 Msa1186530:intron 45.0%
CCATCATTGTACCTTCACAC+AGG - chr8_1:24970824-24970843 None:intergenic 45.0%
! CCTGTGTGAAGGTACAATGA+TGG + chr8_1:24970821-24970840 Msa1186530:intron 45.0%
AGACAGCAGATGCTTGTATG+TGG + chr8_1:24971400-24971419 Msa1186530:CDS 45.0%
! TCTTCCTCACCAAGTTTTCC+AGG - chr8_1:24971469-24971488 None:intergenic 45.0%
CAGAATGATTCAGCAGTCTC+CGG - chr8_1:24971497-24971516 None:intergenic 45.0%
GAGACTGCTGAATCATTCTG+CGG + chr8_1:24971497-24971516 Msa1186530:CDS 45.0%
ACTGCAACTCAAAATCCAGC+AGG + chr8_1:24971647-24971666 Msa1186530:CDS 45.0%
CTGCAACTCAAAATCCAGCA+GGG + chr8_1:24971648-24971667 Msa1186530:CDS 45.0%
TGCAACTCAAAATCCAGCAG+GGG + chr8_1:24971649-24971668 Msa1186530:CDS 45.0%
TTCAACTCCAAATCCAGCAG+AGG + chr8_1:24971679-24971698 Msa1186530:CDS 45.0%
GCATTGTTGCCTCTTGTTCC+TGG + chr8_1:24967856-24967875 Msa1186530:CDS 50.0%
ATGGTCAAAGGCCTTGCCAA+CGG + chr8_1:24968089-24968108 Msa1186530:CDS 50.0%
TTTCTTCTTCCCCGTTGGCA+AGG - chr8_1:24968103-24968122 None:intergenic 50.0%
! AAATCCAGAGGCATGCTGTG+GGG - chr8_1:24968192-24968211 None:intergenic 50.0%
! CAAATCCAGAGGCATGCTGT+GGG - chr8_1:24968193-24968212 None:intergenic 50.0%
! TCAAATCCAGAGGCATGCTG+TGG - chr8_1:24968194-24968213 None:intergenic 50.0%
TGACCAGTCTGCTTCTGCTT+GGG + chr8_1:24968418-24968437 Msa1186530:CDS 50.0%
TTCTGCTTGGGGTAAAGCTG+TGG + chr8_1:24968430-24968449 Msa1186530:CDS 50.0%
ACTCTTCAAAGTCCGGTGCT+TGG + chr8_1:24968462-24968481 Msa1186530:CDS 50.0%
CTCTTCAAAGTCCGGTGCTT+GGG + chr8_1:24968463-24968482 Msa1186530:CDS 50.0%
TCTTCAAAGTCCGGTGCTTG+GGG + chr8_1:24968464-24968483 Msa1186530:CDS 50.0%
TAGTGAGATGCCTTCTTGGG+GGG + chr8_1:24968505-24968524 Msa1186530:CDS 50.0%
TGACCAGTCTGCTTCTGCTT+GGG + chr8_1:24968418-24968437 Msa1186530:CDS 50.0%
TTCTGCTTGGGGTAAAGCTG+TGG + chr8_1:24968430-24968449 Msa1186530:CDS 50.0%
CTTCAAAGTCTGGTGCTTGG+GGG + chr8_1:24968594-24968613 Msa1186530:CDS 50.0%
TAGTGAGCATGCCTTCTTGG+GGG + chr8_1:24968634-24968653 Msa1186530:intron 50.0%
TGACCAGTCTGCTTCTGCTT+GGG + chr8_1:24968418-24968437 Msa1186530:CDS 50.0%
TTCTGCTTGGGGTAAAGCTG+TGG + chr8_1:24968430-24968449 Msa1186530:CDS 50.0%
ACTCTTCAAAGTCCGGTGCT+TGG + chr8_1:24968462-24968481 Msa1186530:CDS 50.0%
CTCTTCAAAGTCCGGTGCTT+GGG + chr8_1:24968463-24968482 Msa1186530:CDS 50.0%
TCTTCAAAGTCCGGTGCTTG+GGG + chr8_1:24968464-24968483 Msa1186530:CDS 50.0%
ATAGTGAGCAGCCTTCTTGG+GGG + chr8_1:24968763-24968782 Msa1186530:CDS 50.0%
TGACCAGTCTGCTTCTGCTT+GGG + chr8_1:24968418-24968437 Msa1186530:CDS 50.0%
TTCTGCTTGGGGTAAAGCTG+TGG + chr8_1:24968430-24968449 Msa1186530:CDS 50.0%
CTTCAAAGTCTGGTGCTTGG+GGG + chr8_1:24968594-24968613 Msa1186530:CDS 50.0%
CTTCAAAGTCTAGCGCTTGG+GGG + chr8_1:24969087-24969106 Msa1186530:CDS 50.0%
TTCAAAGTCTAGCGCTTGGG+GGG + chr8_1:24969088-24969107 Msa1186530:CDS 50.0%
CAAAGTAGTGATCGGCCTTG+GGG + chr8_1:24969122-24969141 Msa1186530:CDS 50.0%
ACCAAATCTGCTGCACCAGA+TGG + chr8_1:24969146-24969165 Msa1186530:CDS 50.0%
TCCATCTGGTGCAGCAGATT+TGG - chr8_1:24969150-24969169 None:intergenic 50.0%
AAAACACCCAATGGGAGTCC+GGG + chr8_1:24969177-24969196 Msa1186530:CDS 50.0%
AGTCCGGGAGCTCTCAAAAA+TGG + chr8_1:24969192-24969211 Msa1186530:CDS 50.0%
ACAGAGCAGAGAAGGCCAAT+TGG + chr8_1:24969327-24969346 Msa1186530:CDS 50.0%
CAGAGCAGAGAAGGCCAATT+GGG + chr8_1:24969328-24969347 Msa1186530:CDS 50.0%
AGAGCAGAGAAGGCCAATTG+GGG + chr8_1:24969329-24969348 Msa1186530:CDS 50.0%
GGTCTGGAAGCTCTCAAAAG+TGG + chr8_1:24969351-24969370 Msa1186530:CDS 50.0%
TTCAAAGTCTGGTGCTTGGG+AGG + chr8_1:24968595-24968614 Msa1186530:CDS 50.0%
AATAACTGGAGCGCAAGCTG+AGG + chr8_1:24969463-24969482 Msa1186530:CDS 50.0%
! GAGAGTCTGGTGGCCTTAAA+TGG + chr8_1:24969504-24969523 Msa1186530:CDS 50.0%
GAAGACTCGACAAACTCAGG+TGG + chr8_1:24969545-24969564 Msa1186530:CDS 50.0%
ACTCGACAAACTCAGGTGGT+TGG + chr8_1:24969549-24969568 Msa1186530:CDS 50.0%
ACTCAGGTGGTTGGAAAGCT+TGG + chr8_1:24969558-24969577 Msa1186530:CDS 50.0%
CTCAGGTGGTTGGAAAGCTT+GGG + chr8_1:24969559-24969578 Msa1186530:CDS 50.0%
TCAGGTGGTTGGAAAGCTTG+GGG + chr8_1:24969560-24969579 Msa1186530:CDS 50.0%
GTCTCACCCTCATGTACTTC+AGG - chr8_1:24969596-24969615 None:intergenic 50.0%
ACTCTCAGAAGTCTGGTGCT+TGG + chr8_1:24969681-24969700 Msa1186530:CDS 50.0%
CTCTCAGAAGTCTGGTGCTT+GGG + chr8_1:24969682-24969701 Msa1186530:CDS 50.0%
TCTCAGAAGTCTGGTGCTTG+GGG + chr8_1:24969683-24969702 Msa1186530:CDS 50.0%
AAACTGCAGGTTCTCGTGGA+TGG + chr8_1:24969900-24969919 Msa1186530:CDS 50.0%
AACTGCAGGTTCTCGTGGAT+GGG + chr8_1:24969901-24969920 Msa1186530:CDS 50.0%
! GTCGCTTTCAGAGTTAGCAG+AGG - chr8_1:24969939-24969958 None:intergenic 50.0%
CGATTCGAAGGTTCGCAAAG+TGG + chr8_1:24970007-24970026 Msa1186530:CDS 50.0%
TTCGAAGGTTCGCAAAGTGG+GGG + chr8_1:24970010-24970029 Msa1186530:CDS 50.0%
AAAGTGGGGGTCCAAATGCT+GGG + chr8_1:24970023-24970042 Msa1186530:CDS 50.0%
ATGCTGGGGACTGGAAAAAC+AGG + chr8_1:24970038-24970057 Msa1186530:CDS 50.0%
GTGTATAAAGGTGGTCTGGC+AGG - chr8_1:24970070-24970089 None:intergenic 50.0%
!!! GGGGCGACGTTTTTTACAGT+AGG - chr8_1:24970263-24970282 None:intergenic 50.0%
AAAACGTCGCCCCTATTCTC+TGG + chr8_1:24970270-24970289 Msa1186530:intron 50.0%
! GTTTGGTCTTCGTCAGCTAG+TGG - chr8_1:24970851-24970870 None:intergenic 50.0%
! CCAAGTTTTCCAGGCACTTG+CGG - chr8_1:24971460-24971479 None:intergenic 50.0%
! AGTGCCTGGAAAACTTGGTG+AGG + chr8_1:24971462-24971481 Msa1186530:CDS 50.0%
AACCCCAACCTCGTGTAAAG+AGG + chr8_1:24971534-24971553 Msa1186530:CDS 50.0%
ACCCCAACCTCGTGTAAAGA+GGG + chr8_1:24971535-24971554 Msa1186530:CDS 50.0%
TCCCTCTTTACACGAGGTTG+GGG - chr8_1:24971539-24971558 None:intergenic 50.0%
GTCCCTCTTTACACGAGGTT+GGG - chr8_1:24971540-24971559 None:intergenic 50.0%
ACTGCAGTTCCAAATCCAGC+AGG + chr8_1:24971587-24971606 Msa1186530:CDS 50.0%
CTGCAGTTCCAAATCCAGCA+GGG + chr8_1:24971588-24971607 Msa1186530:CDS 50.0%
TGCAGTTCCAAATCCAGCAG+GGG + chr8_1:24971589-24971608 Msa1186530:CDS 50.0%
!! TGGAGTTGATGTCTGATCCC+CGG - chr8_1:24971723-24971742 None:intergenic 50.0%
GACATCAACTCCAGTGCCAA+TGG + chr8_1:24971730-24971749 Msa1186530:CDS 50.0%
GTGCTTACCCCAGGAACAAG+AGG - chr8_1:24967868-24967887 None:intergenic 55.0%
TTGTTCCTGGGGTAAGCACG+TGG + chr8_1:24967869-24967888 Msa1186530:intron 55.0%
TGGTCAAAGGCCTTGCCAAC+GGG + chr8_1:24968090-24968109 Msa1186530:CDS 55.0%
GTGACCAGTCTGCTTCTGCT+TGG + chr8_1:24968417-24968436 Msa1186530:CDS 55.0%
GACCAGTCTGCTTCTGCTTG+GGG + chr8_1:24968419-24968438 Msa1186530:CDS 55.0%
TACCCCAAGCAGAAGCAGAC+TGG - chr8_1:24968424-24968443 None:intergenic 55.0%
CTTCAAAGTCCGGTGCTTGG+GGG + chr8_1:24968465-24968484 Msa1186530:CDS 55.0%
TTTGTTGCAGCCCCCCAAGA+AGG - chr8_1:24968518-24968537 None:intergenic 55.0%
GTGACCAGTCTGCTTCTGCT+TGG + chr8_1:24968417-24968436 Msa1186530:CDS 55.0%
GACCAGTCTGCTTCTGCTTG+GGG + chr8_1:24968419-24968438 Msa1186530:CDS 55.0%
TACCCCAAGCAGAAGCAGAC+TGG - chr8_1:24968424-24968443 None:intergenic 55.0%
AGTGAGCATGCCTTCTTGGG+GGG + chr8_1:24968635-24968654 Msa1186530:intron 55.0%
TTTGTTGCAGCCCCCCAAGA+AGG - chr8_1:24968518-24968537 None:intergenic 55.0%
GTGACCAGTCTGCTTCTGCT+TGG + chr8_1:24968417-24968436 Msa1186530:CDS 55.0%
GACCAGTCTGCTTCTGCTTG+GGG + chr8_1:24968419-24968438 Msa1186530:CDS 55.0%
TACCCCAAGCAGAAGCAGAC+TGG - chr8_1:24968424-24968443 None:intergenic 55.0%
CTTCAAAGTCCGGTGCTTGG+GGG + chr8_1:24968465-24968484 Msa1186530:CDS 55.0%
TAGTGAGCAGCCTTCTTGGG+GGG + chr8_1:24968764-24968783 Msa1186530:CDS 55.0%
TTTGTTGCAGCCCCCCAAGA+AGG - chr8_1:24968518-24968537 None:intergenic 55.0%
GTGACCAGTCTGCTTCTGCT+TGG + chr8_1:24968417-24968436 Msa1186530:CDS 55.0%
GACCAGTCTGCTTCTGCTTG+GGG + chr8_1:24968419-24968438 Msa1186530:CDS 55.0%
TACCCCAAGCAGAAGCAGAC+TGG - chr8_1:24968424-24968443 None:intergenic 55.0%
GAGCAGAGAAGGCCAATTGG+GGG + chr8_1:24969330-24969349 Msa1186530:CDS 55.0%
AGAGCTTCCAGACCCCCAAT+TGG - chr8_1:24969345-24969364 None:intergenic 55.0%
GCAAGCTGAGGAAGAGGGAA+GGG + chr8_1:24969475-24969494 Msa1186530:CDS 55.0%
AAGGCCACCAGACTCTCCTT+GGG - chr8_1:24969501-24969520 None:intergenic 55.0%
TAAGGCCACCAGACTCTCCT+TGG - chr8_1:24969502-24969521 None:intergenic 55.0%
GGACAGTTGGGTATGGGGAA+AGG + chr8_1:24969829-24969848 Msa1186530:CDS 55.0%
CAAAGTGGGGGTCCAAATGC+TGG + chr8_1:24970022-24970041 Msa1186530:CDS 55.0%
AAGTGGGGGTCCAAATGCTG+GGG + chr8_1:24970024-24970043 Msa1186530:CDS 55.0%
TGCAGAAGAATCACGGTGGC+AGG - chr8_1:24970594-24970613 None:intergenic 55.0%
TGGAGCAGTTTGTGGGCGAT+AGG - chr8_1:24970772-24970791 None:intergenic 55.0%
TTGGGAGGACTTGTGGTGAC+AGG + chr8_1:24971355-24971374 Msa1186530:intron 55.0%
! CTTTTCGTACCGCAAGTGCC+TGG + chr8_1:24971448-24971467 Msa1186530:CDS 55.0%
CCGCAAGTGCCTGGAAAACT+TGG + chr8_1:24971457-24971476 Msa1186530:CDS 55.0%
GGTCCCTCTTTACACGAGGT+TGG - chr8_1:24971541-24971560 None:intergenic 55.0%
GTCTGGTCCCTCTTTACACG+AGG - chr8_1:24971545-24971564 None:intergenic 55.0%
ACCAGACGCCAAATCCAGCA+GGG + chr8_1:24971558-24971577 Msa1186530:CDS 55.0%
GTCTGCTCCTCTGCTGGATT+TGG - chr8_1:24971689-24971708 None:intergenic 55.0%
TTCCTGGGGTAAGCACGTGG+CGG + chr8_1:24967872-24967891 Msa1186530:intron 60.0%
! AAGCACGTGGCGGTTGGTAC+AGG + chr8_1:24967882-24967901 Msa1186530:intron 60.0%
GGTCAAAGGCCTTGCCAACG+GGG + chr8_1:24968091-24968110 Msa1186530:CDS 60.0%
ATGTCCCCACAGCATGCCTC+TGG + chr8_1:24968185-24968204 Msa1186530:CDS 60.0%
!! GCAGCAGATTTGGTGCCCCA+AGG - chr8_1:24969140-24969159 None:intergenic 60.0%
AGAGCTCCCGGACTCCCATT+GGG - chr8_1:24969186-24969205 None:intergenic 60.0%
GAGAAGGCCAATTGGGGGTC+TGG + chr8_1:24969335-24969354 Msa1186530:CDS 60.0%
TGGAGCGCAAGCTGAGGAAG+AGG + chr8_1:24969469-24969488 Msa1186530:CDS 60.0%
GGAGCGCAAGCTGAGGAAGA+GGG + chr8_1:24969470-24969489 Msa1186530:CDS 60.0%
CGCAAGCTGAGGAAGAGGGA+AGG + chr8_1:24969474-24969493 Msa1186530:CDS 60.0%
GCACGGCTGACAACTGCCTT+GGG - chr8_1:24970176-24970195 None:intergenic 60.0%
TGCACGGCTGACAACTGCCT+TGG - chr8_1:24970177-24970196 None:intergenic 60.0%
GACCAGACGCCAAATCCAGC+AGG + chr8_1:24971557-24971576 Msa1186530:CDS 60.0%
CCAGACGCCAAATCCAGCAG+GGG + chr8_1:24971559-24971578 Msa1186530:CDS 60.0%
GTCTGCTCCCCTGCTGGATT+TGG - chr8_1:24971569-24971588 None:intergenic 60.0%
GTCTGCTCCCCTGCTGGATT+TGG - chr8_1:24971569-24971588 None:intergenic 60.0%
ACTGCAGCTCCAAACCCAGC+AGG + chr8_1:24971617-24971636 Msa1186530:CDS 60.0%
CTGCAGCTCCAAACCCAGCA+GGG + chr8_1:24971618-24971637 Msa1186530:CDS 60.0%
TGCAGCTCCAAACCCAGCAG+GGG + chr8_1:24971619-24971638 Msa1186530:CDS 60.0%
TTGCAGTCTGCTCCCCTGCT+GGG - chr8_1:24971634-24971653 None:intergenic 60.0%
GTTGAAGTCTGCTCCCCTGC+TGG - chr8_1:24971665-24971684 None:intergenic 60.0%
GTAGTGGTCTGCTCCTCTGC+TGG - chr8_1:24971695-24971714 None:intergenic 60.0%
GAGCAGACCACTACACCAGC+CGG + chr8_1:24971701-24971720 Msa1186530:CDS 60.0%
AGCAGACCACTACACCAGCC+GGG + chr8_1:24971702-24971721 Msa1186530:CDS 60.0%
GTTGATGTCTGATCCCCGGC+TGG - chr8_1:24971719-24971738 None:intergenic 60.0%
AACCGCCACGTGCTTACCCC+AGG - chr8_1:24967877-24967896 None:intergenic 65.0%
TGGGGTAAGCACGTGGCGGT+TGG + chr8_1:24967876-24967895 Msa1186530:intron 65.0%
AGTGGCAGTCCCCCAAGCAC+CGG - chr8_1:24968477-24968496 None:intergenic 65.0%
AGTGGCAGTCCCCCAAGCAC+CGG - chr8_1:24968477-24968496 None:intergenic 65.0%
GAGAGCTCCCGGACTCCCAT+TGG - chr8_1:24969187-24969206 None:intergenic 65.0%
GAGGAAGAGGGAAGGGCCCA+AGG + chr8_1:24969482-24969501 Msa1186530:CDS 65.0%
GGAAGGGCCCAAGGAGAGTC+TGG + chr8_1:24969491-24969510 Msa1186530:CDS 65.0%
AGGGCCCAAGGAGAGTCTGG+TGG + chr8_1:24969494-24969513 Msa1186530:CDS 65.0%
GGGGTCCAAATGCTGGGGAC+TGG + chr8_1:24970029-24970048 Msa1186530:CDS 65.0%
CCCCTGCTGGATTTGGCGTC+TGG - chr8_1:24971562-24971581 None:intergenic 65.0%
ACTGCAGTCTGCTCCCCTGC+TGG - chr8_1:24971575-24971594 None:intergenic 65.0%
GTCTGCTCCCCTGCTGGGTT+TGG - chr8_1:24971629-24971648 None:intergenic 65.0%
GTTGCAGTCTGCTCCCCTGC+TGG - chr8_1:24971635-24971654 None:intergenic 65.0%
GCAGACCACTACACCAGCCG+GGG + chr8_1:24971703-24971722 Msa1186530:CDS 65.0%
CTGATCCCCGGCTGGTGTAG+TGG - chr8_1:24971711-24971730 None:intergenic 65.0%
GCTGCAGTCTGCTCCCCTGC+TGG - chr8_1:24971605-24971624 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 24967706 24971763 24967706 ID=Msa1186530;Name=Msa1186530
chr8_1 mRNA 24967706 24971763 24967706 ID=Msa1186530-mRNA-1;Parent=Msa1186530;Name=Msa1186530-mRNA-1;_AED=0.38;_eAED=0.44;_QI=0|0|0|1|1|1|6|0|883
chr8_1 exon 24967706 24967719 24967706 ID=Msa1186530-mRNA-1:exon:9029;Parent=Msa1186530-mRNA-1
chr8_1 exon 24967798 24967879 24967798 ID=Msa1186530-mRNA-1:exon:9030;Parent=Msa1186530-mRNA-1
chr8_1 exon 24968041 24968635 24968041 ID=Msa1186530-mRNA-1:exon:9031;Parent=Msa1186530-mRNA-1
chr8_1 exon 24968706 24970164 24968706 ID=Msa1186530-mRNA-1:exon:9032;Parent=Msa1186530-mRNA-1
chr8_1 exon 24970832 24970946 24970832 ID=Msa1186530-mRNA-1:exon:9033;Parent=Msa1186530-mRNA-1
chr8_1 exon 24971377 24971763 24971377 ID=Msa1186530-mRNA-1:exon:9034;Parent=Msa1186530-mRNA-1
chr8_1 CDS 24967706 24967719 24967706 ID=Msa1186530-mRNA-1:cds;Parent=Msa1186530-mRNA-1
chr8_1 CDS 24967798 24967879 24967798 ID=Msa1186530-mRNA-1:cds;Parent=Msa1186530-mRNA-1
chr8_1 CDS 24968041 24968635 24968041 ID=Msa1186530-mRNA-1:cds;Parent=Msa1186530-mRNA-1
chr8_1 CDS 24968706 24970164 24968706 ID=Msa1186530-mRNA-1:cds;Parent=Msa1186530-mRNA-1
chr8_1 CDS 24970832 24970946 24970832 ID=Msa1186530-mRNA-1:cds;Parent=Msa1186530-mRNA-1
chr8_1 CDS 24971377 24971763 24971377 ID=Msa1186530-mRNA-1:cds;Parent=Msa1186530-mRNA-1
Gene Sequence

>Msa1186530

ATGCAACACTCTTTACTCCTCGAAAATGCTTTGAAAGAGCTGCTGAGAAACACCACTCAGACTCTTTGTCAAGCATTGTTGCCTCTTGTTCCTGGGATAAAAACAAATGAAATTGAAGGGATGAATGTTTACAGATTTCTCAATATGGTCAAAGGCCTTGCCAACGGGGAAGAAGAAACAAATGCTTGTTTGGGTGAGGACATCGATGATCTGTTTGACGATGAAAATGGGGACTTTGACATGTCCCCACAGCATGCCTCTGGATTTGATGCTGTCTTTGATGAGACTTTTGAACTTCCGAATGGCTCAACATCAAATGGTTGGGATTCAAATAAAGACCAGATTGATCAGACCAATGCAAACTCAAATGATTGGTCTGGTTGGGGACAAAATAAATCTGACTTACAAGTTGATGTTATCCAAGAAGACTCTTCTAAGTCTAGTGCTTGGGGGGCTGCAACAAATCAAAAGAGTGACCAGTCTGCTTCTGCTTGGGGTAAAGCTGTGGTGCAAGAAGACTCTTCAAAGTCCGGTGCTTGGGGGACTGCCACTAATCAAAATAGTGAGATGCCTTCTTGGGGGGCTGCAACAAATCAAAAGAGTGACCAGTCTGCTTCTGCTTGGGGTAAAGCTGTGGTGCAAGAAGACTCTTCAAAGTCTGGTGCTTGGGGGACTGCCACTAATCAAAATACTGTGGTGCAAGAAGACTCTTCAAAGTCCGGTGCTTGGGGGACTGCCACTAATCAAAATAGTGAGCAGCCTTCTTGGGGGGCTGCAACAAATCAAAAGAGTGACCAGTCTGCTTCTGCTTGGGGTAAAGCTGTGGTGCAAGAAGACTCTTCAAAGTCTGGTGCTTGGGGGACTGCCACTAATCAAAATAGTGAGCAGCCTTGGAAATCTGCAGCACAAGAAGACTCTTCAAAGTCTAGTGCTTGGGGGACTGCCACTAATCAAAATAGTGAGCAGCCTTGGAAATCTGCAGCACAAGAAGACTCTTCAAAGTCTAGTGCTTGGGGGACTGCCACTAATCAAAATAGTGAGCAGCCTTGGAAATCTGCAGCACAAGAAGACTCTTCAAAGTCTAGCGCTTGGGGGGCTGCCACAAATCAAAGTAGTGATCGGCCTTGGGGCACCAAATCTGCTGCACCAGATGGAGCAGTTAAAAACACCCAATGGGAGTCCGGGAGCTCTCAAAAATGGAAACCTGATGCTATCCAAGAAGACTCTTCAAAATCTGGTGCTTGGGAGACGAACAAAAATCAAAATAGTAATCAATCTTCTTGGGGCAAGAAGAAATCAGGAATACAAGATGACAGAGCAGAGAAGGCCAATTGGGGGTCTGGAAGCTCTCAAAAGTGGAAAGCTGGTGTTGTCCAAGAAGACTCTTCAAAGTCTGGTGCTTGGGAGGCCAACACAAATCAAAGTAGCGATTCATCGTGTTGGGGACAAATAACTGGAGCGCAAGCTGAGGAAGAGGGAAGGGCCCAAGGAGAGTCTGGTGGCCTTAAATGGAAAGCTGATGTTATCCAAGAAGACTCGACAAACTCAGGTGGTTGGAAAGCTTGGGGAAGCAGTAAACCTGAAGTACATGAGGGTGAGACTATAAAAGTACAAGATTCTTGGAACTCTCAGAAATGGAAAGCTGGAGCGGATGTTACCCAAGAAGACTCTCAGAAGTCTGGTGCTTGGGGTGCAACAAAACCGAAGTCAAATGATAATAGGTCCTCGTGGGGACAGAAAAAAGATGAAATACATGTTATGCCGGAAGACTCTTCTAGATCTAATGCTTGGGAACAGAAGACGGAAAATGTAAAGGACAGTTGGGTATGGGGAAAGGCTAAATCACCAGAAAACCTATCTTGGGAGTCCAAGAATGAGTCAAATCAAACTGCAGGTTCTCGTGGATGGGACTCACAAGTTGCCTCTGCTAACTCTGAAAGCGACAGAAGTTTTCAATGGGGAAAACAAGGAAGAGATTCATTTAAGAAAAATCGATTCGAAGGTTCGCAAAGTGGGGGTCCAAATGCTGGGGACTGGAAAAACAGGAGTCGCCCTGCCAGACCACCTTTATACACTCCTGAAGAGCAAGATATCATGAAGGATATTGAACCTATTGTCCAGTCAATCAGAAGAATCATGCAACTACAAGGGTACAATGATGGGGATCCACTAGCTGACGAAGACCAAACGTATGTGCTAGAGAATGTATTCGAGCATCATCCTGATAAAGAAACAAAAATGGGTGTTGGAGTTGATCATGTCATGGTCAGCAAACACAGCAATTTTCAAGACAGCAGATGCTTGTATGTGGTTTTAAAAGATGGTAAAAAGGAAGACTTTTCGTACCGCAAGTGCCTGGAAAACTTGGTGAGGAAGAAATATCCGGAGACTGCTGAATCATTCTGCGGCAAATATTTCAGGAAACCCCAACCTCGTGTAAAGAGGGACCAGACGCCAAATCCAGCAGGGGAGCAGACTGCAGTTCCAAATCCAGCAGGGGAGCAGACTGCAGCTCCAAACCCAGCAGGGGAGCAGACTGCAACTCAAAATCCAGCAGGGGAGCAGACTTCAACTCCAAATCCAGCAGAGGAGCAGACCACTACACCAGCCGGGGATCAGACATCAACTCCAGTGCCAATGGAAACCAATTAG
Protein sequence

>Msa1186530

MQHSLLLENALKELLRNTTQTLCQALLPLVPGIKTNEIEGMNVYRFLNMVKGLANGEEETNACLGEDIDDLFDDENGDFDMSPQHASGFDAVFDETFELPNGSTSNGWDSNKDQIDQTNANSNDWSGWGQNKSDLQVDVIQEDSSKSSAWGAATNQKSDQSASAWGKAVVQEDSSKSGAWGTATNQNSEMPSWGAATNQKSDQSASAWGKAVVQEDSSKSGAWGTATNQNTVVQEDSSKSGAWGTATNQNSEQPSWGAATNQKSDQSASAWGKAVVQEDSSKSGAWGTATNQNSEQPWKSAAQEDSSKSSAWGTATNQNSEQPWKSAAQEDSSKSSAWGTATNQNSEQPWKSAAQEDSSKSSAWGAATNQSSDRPWGTKSAAPDGAVKNTQWESGSSQKWKPDAIQEDSSKSGAWETNKNQNSNQSSWGKKKSGIQDDRAEKANWGSGSSQKWKAGVVQEDSSKSGAWEANTNQSSDSSCWGQITGAQAEEEGRAQGESGGLKWKADVIQEDSTNSGGWKAWGSSKPEVHEGETIKVQDSWNSQKWKAGADVTQEDSQKSGAWGATKPKSNDNRSSWGQKKDEIHVMPEDSSRSNAWEQKTENVKDSWVWGKAKSPENLSWESKNESNQTAGSRGWDSQVASANSESDRSFQWGKQGRDSFKKNRFEGSQSGGPNAGDWKNRSRPARPPLYTPEEQDIMKDIEPIVQSIRRIMQLQGYNDGDPLADEDQTYVLENVFEHHPDKETKMGVGVDHVMVSKHSNFQDSRCLYVVLKDGKKEDFSYRKCLENLVRKKYPETAESFCGKYFRKPQPRVKRDQTPNPAGEQTAVPNPAGEQTAAPNPAGEQTATQNPAGEQTSTPNPAEEQTTTPAGDQTSTPVPMETN*