Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748400 | XP_003602146.1 | 93.989 | 366 | 22 | 0 | 1 | 366 | 1 | 366 | 0.0 | 728 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748400 | sp|Q84VY3|STAD6_ARATH | 69.492 | 354 | 103 | 2 | 18 | 366 | 38 | 391 | 0.0 | 521 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748400 | G7J653 | 93.989 | 366 | 22 | 0 | 1 | 366 | 1 | 366 | 0.0 | 728 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006980 | Msa0748400 | 0.803649 | 3.151848e-49 | -8.615850e-47 |
| Msa0019600 | Msa0748400 | 0.831032 | 2.100911e-55 | -8.615850e-47 |
| Msa0111750 | Msa0748400 | 0.806000 | 1.017000e-49 | -8.615850e-47 |
| Msa0669840 | Msa0748400 | 0.825440 | 4.682401e-54 | -8.615850e-47 |
| Msa0748400 | Msa0751890 | 0.845363 | 4.256782e-59 | -8.615850e-47 |
| Msa0748400 | Msa0752840 | 0.852220 | 5.326529e-61 | -8.615850e-47 |
| Msa0748400 | Msa0831940 | 0.823595 | 1.272897e-53 | -8.615850e-47 |
| Msa0748400 | Msa0867350 | 0.815872 | 7.399174e-52 | -8.615850e-47 |
| Msa0748400 | Msa0898730 | 0.819922 | 9.004652e-53 | -8.615850e-47 |
| Msa0748400 | Msa0916640 | 0.960999 | 3.388391e-119 | -8.615850e-47 |
| Msa0748400 | Msa0953540 | 0.953597 | 1.930660e-111 | -8.615850e-47 |
| Msa0748400 | Msa1037890 | 0.803067 | 4.160357e-49 | -8.615850e-47 |
| Msa0748400 | Msa1084520 | 0.805377 | 1.374690e-49 | -8.615850e-47 |
| Msa0748400 | Msa1171310 | 0.819410 | 1.178859e-52 | -8.615850e-47 |
| Msa0748400 | Msa1201160 | 0.808235 | 3.421184e-50 | -8.615850e-47 |
| Msa0748400 | Msa1378870 | 0.813238 | 2.832051e-51 | -8.615850e-47 |
| Msa0748400 | Msa1394890 | 0.800657 | 1.300201e-48 | -8.615850e-47 |
| Msa0748400 | Msa1455320 | 0.813807 | 2.123315e-51 | -8.615850e-47 |
| Msa0124130 | Msa0748400 | 0.816366 | 5.739444e-52 | -8.615850e-47 |
| Msa0141120 | Msa0748400 | 0.814238 | 1.705366e-51 | -8.615850e-47 |
| Msa0149140 | Msa0748400 | 0.817562 | 3.092129e-52 | -8.615850e-47 |
| Msa0406000 | Msa0748400 | 0.830947 | 2.204219e-55 | -8.615850e-47 |
| Msa0424340 | Msa0748400 | 0.815709 | 8.045695e-52 | -8.615850e-47 |
| Msa0424350 | Msa0748400 | 0.841524 | 4.510917e-58 | -8.615850e-47 |
| Msa0451400 | Msa0748400 | 0.842046 | 3.283350e-58 | -8.615850e-47 |
| Msa0343660 | Msa0748400 | 0.822540 | 2.242794e-53 | -8.615850e-47 |
| Msa0359250 | Msa0748400 | 0.837206 | 5.960193e-57 | -8.615850e-47 |
| Msa0492190 | Msa0748400 | 0.814001 | 1.924010e-51 | -8.615850e-47 |
| Msa0515950 | Msa0748400 | 0.808697 | 2.727095e-50 | -8.615850e-47 |
| Msa0591790 | Msa0748400 | 0.800601 | 1.335326e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748400 | MtrunA17_Chr3g0126011 | 93.989 | 366 | 22 | 0 | 1 | 366 | 1 | 366 | 0.0 | 728 |
| Msa0748400 | MtrunA17_Chr3g0125991 | 90.984 | 366 | 33 | 0 | 1 | 366 | 1 | 366 | 0.0 | 702 |
| Msa0748400 | MtrunA17_Chr3g0125781 | 79.781 | 366 | 70 | 1 | 5 | 366 | 4 | 369 | 0.0 | 610 |
| Msa0748400 | MtrunA17_Chr3g0125981 | 76.022 | 367 | 83 | 1 | 3 | 364 | 2 | 368 | 0.0 | 587 |
| Msa0748400 | MtrunA17_Chr1g0159321 | 75.731 | 342 | 80 | 1 | 26 | 364 | 47 | 388 | 0.0 | 553 |
| Msa0748400 | MtrunA17_Chr4g0045661 | 65.805 | 348 | 111 | 3 | 23 | 364 | 46 | 391 | 1.10e-171 | 483 |
| Msa0748400 | MtrunA17_Chr5g0406961 | 65.805 | 348 | 111 | 3 | 23 | 364 | 97 | 442 | 1.88e-171 | 485 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748400 | AT1G43800.1 | 69.492 | 354 | 103 | 2 | 18 | 366 | 38 | 391 | 0.0 | 521 |
| Msa0748400 | AT3G02630.1 | 65.680 | 338 | 112 | 2 | 29 | 364 | 59 | 394 | 3.55e-168 | 475 |
| Msa0748400 | AT5G16240.1 | 63.324 | 349 | 119 | 3 | 23 | 364 | 46 | 392 | 6.80e-166 | 469 |
| Msa0748400 | AT3G02610.2 | 59.677 | 372 | 130 | 5 | 14 | 366 | 43 | 413 | 1.81e-162 | 461 |
| Msa0748400 | AT3G02610.1 | 59.677 | 372 | 130 | 5 | 14 | 366 | 41 | 411 | 1.90e-162 | 461 |
| Msa0748400 | AT2G43710.2 | 63.422 | 339 | 121 | 2 | 29 | 366 | 65 | 401 | 4.77e-162 | 460 |
| Msa0748400 | AT2G43710.1 | 63.422 | 339 | 121 | 2 | 29 | 366 | 65 | 401 | 5.88e-162 | 459 |
| Msa0748400 | AT3G02620.2 | 59.615 | 364 | 135 | 4 | 14 | 366 | 44 | 406 | 6.41e-162 | 459 |
| Msa0748400 | AT3G02620.1 | 59.615 | 364 | 135 | 4 | 14 | 366 | 41 | 403 | 9.23e-162 | 459 |
| Msa0748400 | AT5G16230.1 | 61.988 | 342 | 125 | 3 | 29 | 366 | 61 | 401 | 1.40e-160 | 456 |
| Msa0748400 | AT5G16230.2 | 61.963 | 326 | 119 | 3 | 45 | 366 | 1 | 325 | 2.97e-154 | 437 |
| Msa0748400 | AT3G02620.3 | 61.585 | 328 | 119 | 3 | 45 | 366 | 1 | 327 | 1.92e-152 | 432 |
Find 92 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATGATTATCTTGTGGTTT+TGG | 0.263671 | 5_2:+1633560 | Msa0748400:CDS |
| AATCTTGCGATGCATCATTT+TGG | 0.286538 | 5_2:-1634693 | None:intergenic |
| GAGACATTGAGTGTGTCTTT+TGG | 0.299881 | 5_2:-1633359 | None:intergenic |
| CCAACTTGTTTATCCATGTT+TGG | 0.336928 | 5_2:-1633620 | None:intergenic |
| GTCTCACACCATGGGCTATA+TGG | 0.350432 | 5_2:+1633670 | Msa0748400:CDS |
| CTCTCAGGGCCTGCACTTGA+TGG | 0.353548 | 5_2:-1633518 | None:intergenic |
| TGCACCTAGATTAAGAAAAC+TGG | 0.364017 | 5_2:+1634916 | Msa0748400:CDS |
| GGGCTATATGGTCACGCTCT+TGG | 0.370720 | 5_2:+1633682 | Msa0748400:CDS |
| TGCCAGCTCCAATCAAATAT+TGG | 0.374430 | 5_2:-1633794 | None:intergenic |
| TGTTCAAATCACTAGAGAAA+TGG | 0.378630 | 5_2:+1633397 | Msa0748400:CDS |
| CTTGATTAGACGATGGAGAT+TGG | 0.392791 | 5_2:+1634835 | Msa0748400:CDS |
| GTTCAAATCACTAGAGAAAT+GGG | 0.399384 | 5_2:+1633398 | Msa0748400:CDS |
| AAGACTATCCAATATTTGAT+TGG | 0.400329 | 5_2:+1633786 | Msa0748400:CDS |
| GCTCAGCCGTTCGATCTCTC+AGG | 0.408301 | 5_2:-1633533 | None:intergenic |
| GGCTGCCAGCATTCCTCCAC+AGG | 0.422913 | 5_2:-1633450 | None:intergenic |
| GTGTACACAAAACCCATGTA+TGG | 0.438769 | 5_2:-1634479 | None:intergenic |
| AGATCAATCACAAATTCTCT+TGG | 0.444851 | 5_2:+1634966 | Msa0748400:CDS |
| GATGGAGTTGGCGACGAGAC+TGG | 0.447459 | 5_2:+1633642 | Msa0748400:CDS |
| TGGAGATTGGAGAAGATTGA+GGG | 0.448075 | 5_2:+1634848 | Msa0748400:CDS |
| TCTGCAGTGGCACAACGTAT+TGG | 0.460018 | 5_2:+1634773 | Msa0748400:CDS |
| ATCCAATATTTGATTGGAGC+TGG | 0.463614 | 5_2:+1633792 | Msa0748400:CDS |
| AAACTGGAAGAGCGTCTTGA+TGG | 0.465202 | 5_2:+1634932 | Msa0748400:CDS |
| TACCGAAAACAACCCATACA+TGG | 0.467155 | 5_2:+1634466 | Msa0748400:CDS |
| AGTTGATCCCACCGAGGCTA+TGG | 0.482931 | 5_2:+1634661 | Msa0748400:CDS |
| ATGGAGATTGGAGAAGATTG+AGG | 0.484391 | 5_2:+1634847 | Msa0748400:CDS |
| GGCTATGGCCACCATAGCCT+CGG | 0.489653 | 5_2:-1634672 | None:intergenic |
| TTCACAAAGTGTGTTGCCAT+TGG | 0.492726 | 5_2:+1633422 | Msa0748400:CDS |
| AAAACCACAAGATAATCATC+TGG | 0.498146 | 5_2:-1633558 | None:intergenic |
| TTTATCCATGTTTGGTACGT+AGG | 0.501588 | 5_2:-1633612 | None:intergenic |
| TCTCTTTAGCCAACCTACCT+AGG | 0.503420 | 5_2:-1634541 | None:intergenic |
| CTCTCACTTGCACGCATATG+CGG | 0.504929 | 5_2:+1634572 | Msa0748400:CDS |
| GTACGTAGGCAATGCTTCCT+CGG | 0.510676 | 5_2:-1633598 | None:intergenic |
| ATTAGACGAAAGTGGGCTCA+TGG | 0.514548 | 5_2:-1635132 | None:intergenic |
| GAGAGCAATTAGACGAAAGT+GGG | 0.519569 | 5_2:-1635139 | None:intergenic |
| TCGGAAGGTAGTGATGAGTC+TGG | 0.523237 | 5_2:-1633486 | None:intergenic |
| TGAGAGCAATTAGACGAAAG+TGG | 0.524192 | 5_2:-1635140 | None:intergenic |
| TCTCACTTGCACGCATATGC+GGG | 0.524777 | 5_2:+1634573 | Msa0748400:CDS |
| GCTTCCAGATGATTATCTTG+TGG | 0.527931 | 5_2:+1633554 | Msa0748400:CDS |
| CCCGCTCACTTGATGCATGA+TGG | 0.529067 | 5_2:+1634722 | Msa0748400:CDS |
| AACTGGAAGAGCGTCTTGAT+GGG | 0.529372 | 5_2:+1634933 | Msa0748400:CDS |
| TCCACTACAATGTTATCTAA+AGG | 0.529663 | 5_2:+1633311 | Msa0748400:CDS |
| CCAAACATGGATAAACAAGT+TGG | 0.530351 | 5_2:+1633620 | Msa0748400:CDS |
| AAAACTTATCTATATCTCTC+CGG | 0.537755 | 5_2:+1633738 | Msa0748400:CDS |
| CATTGCCTACGTACCAAACA+TGG | 0.538689 | 5_2:+1633607 | Msa0748400:CDS |
| ATATTTGATTGGAGCTGGCA+TGG | 0.538813 | 5_2:+1633797 | Msa0748400:CDS |
| AAATGTGGCTCGCTCTTGAA+AGG | 0.540932 | 5_2:-1634504 | None:intergenic |
| TCAAACCTGTGGAGGAATGC+TGG | 0.543810 | 5_2:+1633445 | Msa0748400:CDS |
| CCATCATGCATCAAGTGAGC+GGG | 0.549039 | 5_2:-1634722 | None:intergenic |
| TCCTCCACAGGTTTGACCAA+TGG | 0.550904 | 5_2:-1633438 | None:intergenic |
| ATAAACAAGTTGGATGGAGT+TGG | 0.559959 | 5_2:+1633630 | Msa0748400:CDS |
| CGCATATGCGTGCAAGTGAG+AGG | 0.561577 | 5_2:-1634571 | None:intergenic |
| TGAGTTCATCCATCAAGTGC+AGG | 0.567672 | 5_2:+1633509 | Msa0748400:CDS |
| TATGGCCACCATAGCCTCGG+TGG | 0.570103 | 5_2:-1634669 | None:intergenic |
| GCCTTTAGATAACATTGTAG+TGG | 0.571116 | 5_2:-1633312 | None:intergenic |
| ACATGGATAAACAAGTTGGA+TGG | 0.572710 | 5_2:+1633624 | Msa0748400:CDS |
| ATTGAGGGTTTGACAAGCGA+AGG | 0.578019 | 5_2:+1634863 | Msa0748400:CDS |
| CTCAGCCGTTCGATCTCTCA+GGG | 0.579284 | 5_2:-1633532 | None:intergenic |
| TTGTTCATGGTGTAGGATGT+GGG | 0.582554 | 5_2:+1634443 | Msa0748400:intron |
| CAACAATATGCACCCATGCA+TGG | 0.584323 | 5_2:+1633286 | Msa0748400:CDS |
| TGTCACACGGCAACCTAGGT+AGG | 0.586115 | 5_2:+1634528 | Msa0748400:CDS |
| CATGCACATATCAACTCGAC+CGG | 0.587049 | 5_2:-1633757 | None:intergenic |
| TGATCCCACCGAGGCTATGG+TGG | 0.588287 | 5_2:+1634664 | Msa0748400:CDS |
| TGGTTCAAGTCTCACACCAT+GGG | 0.600203 | 5_2:+1633662 | Msa0748400:CDS |
| TTTGTGTCACACGGCAACCT+AGG | 0.600519 | 5_2:+1634524 | Msa0748400:CDS |
| TAGAGTTCTTGATTAGACGA+TGG | 0.605110 | 5_2:+1634828 | Msa0748400:CDS |
| TCCATCATGCATCAAGTGAG+CGG | 0.608659 | 5_2:-1634723 | None:intergenic |
| CTGGTTCAAGTCTCACACCA+TGG | 0.612232 | 5_2:+1633661 | Msa0748400:CDS |
| ATTGTAGTGGAGTCCATGCA+TGG | 0.616264 | 5_2:-1633299 | None:intergenic |
| GCAGGCCCTGAGAGATCGAA+CGG | 0.616767 | 5_2:+1633527 | Msa0748400:CDS |
| CGAGCCACATTTGTGTCACA+CGG | 0.618843 | 5_2:+1634515 | Msa0748400:CDS |
| ATGGCCACCATAGCCTCGGT+GGG | 0.619166 | 5_2:-1634668 | None:intergenic |
| TGCAATTATAAAACTTCACA+CGG | 0.621217 | 5_2:-1635008 | None:intergenic |
| GAGCGTGACCATATAGCCCA+TGG | 0.625365 | 5_2:-1633678 | None:intergenic |
| ACCGAAAACAACCCATACAT+GGG | 0.628237 | 5_2:+1634467 | Msa0748400:CDS |
| TATCAAATTAACAATGACGA+TGG | 0.630822 | 5_2:+1633263 | Msa0748400:exon |
| GTTGCCATTGGTCAAACCTG+TGG | 0.631709 | 5_2:+1633434 | Msa0748400:CDS |
| ACACGGCAACCTAGGTAGGT+TGG | 0.632318 | 5_2:+1634532 | Msa0748400:CDS |
| GGTAGGTTGGCTAAAGAGAG+AGG | 0.635441 | 5_2:+1634545 | Msa0748400:CDS |
| TGTACACAAAACCCATGTAT+GGG | 0.636404 | 5_2:-1634478 | None:intergenic |
| GAATGCATATGTGAGGATTG+TGG | 0.642224 | 5_2:+1634625 | Msa0748400:CDS |
| GAGTCTGGCAACAAATTATG+TGG | 0.650290 | 5_2:-1633471 | None:intergenic |
| GCCATTGGTCAAACCTGTGG+AGG | 0.654988 | 5_2:+1633437 | Msa0748400:CDS |
| CACTTGATGGATGAACTCAT+CGG | 0.663477 | 5_2:-1633505 | None:intergenic |
| GTCACGAGAATGCATATGTG+AGG | 0.664895 | 5_2:+1634618 | Msa0748400:CDS |
| ACCGCTGAAGAAAATAGACA+TGG | 0.664992 | 5_2:+1633705 | Msa0748400:CDS |
| CTCGTGACGCTTCTCATCAG+CGG | 0.665409 | 5_2:-1634603 | None:intergenic |
| TGATGGATGAACTCATCGGA+AGG | 0.673548 | 5_2:-1633501 | None:intergenic |
| TTGTAGTGGAGTCCATGCAT+GGG | 0.697506 | 5_2:-1633298 | None:intergenic |
| CATGCACAAGAGTTTGTGTG+TGG | 0.720139 | 5_2:+1634890 | Msa0748400:CDS |
| GTTGCCGTGTGACACAAATG+TGG | 0.723814 | 5_2:-1634519 | None:intergenic |
| GGTCGGTGGCATGATCACCG+AGG | 0.744020 | 5_2:+1633581 | Msa0748400:CDS |
| TCTAGAAGTTGATCCCACCG+AGG | 0.786898 | 5_2:+1634655 | Msa0748400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTATGAAAAATGTTATT+TGG | - | chr5_2:1634417-1634436 | None:intergenic | 10.0% |
| !! | AATTTATGAAAAATGTTATT+TGG | - | chr5_2:1634417-1634436 | None:intergenic | 10.0% |
| !! | ATAAATTAATTGATTGTTCA+TGG | + | chr5_2:1634430-1634449 | Msa0748400:intron | 15.0% |
| !! | ATAAATTAATTGATTGTTCA+TGG | + | chr5_2:1634430-1634449 | Msa0748400:intron | 15.0% |
| !! | TAATAAATCGTATTTGTGTA+TGG | - | chr5_2:1634096-1634115 | None:intergenic | 20.0% |
| !! | TAATAAATCGTATTTGTGTA+TGG | - | chr5_2:1634096-1634115 | None:intergenic | 20.0% |
| ! | TATCAAATTAACAATGACGA+TGG | + | chr5_2:1633263-1633282 | Msa0748400:exon | 25.0% |
| ! | AAAACTTATCTATATCTCTC+CGG | + | chr5_2:1633738-1633757 | Msa0748400:CDS | 25.0% |
| ! | AAGACTATCCAATATTTGAT+TGG | + | chr5_2:1633786-1633805 | Msa0748400:CDS | 25.0% |
| !!! | ATTTGTTATTCTCGTTAGTT+TGG | - | chr5_2:1633998-1634017 | None:intergenic | 25.0% |
| ! | ACAATGCATAATATATGCAA+AGG | + | chr5_2:1634225-1634244 | Msa0748400:intron | 25.0% |
| ! | GAACGACTATTAAAAAATAG+TGG | - | chr5_2:1634289-1634308 | None:intergenic | 25.0% |
| !!! | TTCTATTTCTTTTTCTTTCG+AGG | + | chr5_2:1634378-1634397 | Msa0748400:intron | 25.0% |
| ! | TGCAATTATAAAACTTCACA+CGG | - | chr5_2:1635011-1635030 | None:intergenic | 25.0% |
| ! | TATCAAATTAACAATGACGA+TGG | + | chr5_2:1633263-1633282 | Msa0748400:exon | 25.0% |
| ! | AAAACTTATCTATATCTCTC+CGG | + | chr5_2:1633738-1633757 | Msa0748400:CDS | 25.0% |
| ! | AAGACTATCCAATATTTGAT+TGG | + | chr5_2:1633786-1633805 | Msa0748400:CDS | 25.0% |
| !!! | ATTTGTTATTCTCGTTAGTT+TGG | - | chr5_2:1633998-1634017 | None:intergenic | 25.0% |
| ! | ACAATGCATAATATATGCAA+AGG | + | chr5_2:1634225-1634244 | Msa0748400:intron | 25.0% |
| ! | GAACGACTATTAAAAAATAG+TGG | - | chr5_2:1634289-1634308 | None:intergenic | 25.0% |
| !!! | TTCTATTTCTTTTTCTTTCG+AGG | + | chr5_2:1634378-1634397 | Msa0748400:intron | 25.0% |
| ! | TGCAATTATAAAACTTCACA+CGG | - | chr5_2:1635011-1635030 | None:intergenic | 25.0% |
| TCCACTACAATGTTATCTAA+AGG | + | chr5_2:1633311-1633330 | Msa0748400:CDS | 30.0% | |
| !! | TTTTAGGAATGTTTTGGATG+GGG | - | chr5_2:1633337-1633356 | None:intergenic | 30.0% |
| !!! | GTTTTAGGAATGTTTTGGAT+GGG | - | chr5_2:1633338-1633357 | None:intergenic | 30.0% |
| ! | TTGAACACTTCTTTCTTTTC+AGG | - | chr5_2:1633384-1633403 | None:intergenic | 30.0% |
| TGTTCAAATCACTAGAGAAA+TGG | + | chr5_2:1633397-1633416 | Msa0748400:CDS | 30.0% | |
| GTTCAAATCACTAGAGAAAT+GGG | + | chr5_2:1633398-1633417 | Msa0748400:CDS | 30.0% | |
| AAAACCACAAGATAATCATC+TGG | - | chr5_2:1633561-1633580 | None:intergenic | 30.0% | |
| ! | AGATGATTATCTTGTGGTTT+TGG | + | chr5_2:1633560-1633579 | Msa0748400:CDS | 30.0% |
| ATATGTATAGATGACAGTGA+CGG | - | chr5_2:1633837-1633856 | None:intergenic | 30.0% | |
| ACATATACATGCACACAATA+TGG | + | chr5_2:1633851-1633870 | Msa0748400:intron | 30.0% | |
| AGCTCACAAAGATAAAATAG+AGG | - | chr5_2:1634188-1634207 | None:intergenic | 30.0% | |
| !!! | ATAGTGGTGTCTTTTTTTTG+CGG | - | chr5_2:1634273-1634292 | None:intergenic | 30.0% |
| TAATTGATTGTTCATGGTGT+AGG | + | chr5_2:1634436-1634455 | Msa0748400:intron | 30.0% | |
| ! | TCTTCCAGTTTTCTTAATCT+AGG | - | chr5_2:1634923-1634942 | None:intergenic | 30.0% |
| AGATCAATCACAAATTCTCT+TGG | + | chr5_2:1634966-1634985 | Msa0748400:CDS | 30.0% | |
| TCCACTACAATGTTATCTAA+AGG | + | chr5_2:1633311-1633330 | Msa0748400:CDS | 30.0% | |
| !! | TTTTAGGAATGTTTTGGATG+GGG | - | chr5_2:1633337-1633356 | None:intergenic | 30.0% |
| !!! | GTTTTAGGAATGTTTTGGAT+GGG | - | chr5_2:1633338-1633357 | None:intergenic | 30.0% |
| ! | TTGAACACTTCTTTCTTTTC+AGG | - | chr5_2:1633384-1633403 | None:intergenic | 30.0% |
| TGTTCAAATCACTAGAGAAA+TGG | + | chr5_2:1633397-1633416 | Msa0748400:CDS | 30.0% | |
| GTTCAAATCACTAGAGAAAT+GGG | + | chr5_2:1633398-1633417 | Msa0748400:CDS | 30.0% | |
| AAAACCACAAGATAATCATC+TGG | - | chr5_2:1633561-1633580 | None:intergenic | 30.0% | |
| ! | AGATGATTATCTTGTGGTTT+TGG | + | chr5_2:1633560-1633579 | Msa0748400:CDS | 30.0% |
| ATATGTATAGATGACAGTGA+CGG | - | chr5_2:1633837-1633856 | None:intergenic | 30.0% | |
| ACATATACATGCACACAATA+TGG | + | chr5_2:1633851-1633870 | Msa0748400:intron | 30.0% | |
| AGCTCACAAAGATAAAATAG+AGG | - | chr5_2:1634188-1634207 | None:intergenic | 30.0% | |
| !!! | ATAGTGGTGTCTTTTTTTTG+CGG | - | chr5_2:1634273-1634292 | None:intergenic | 30.0% |
| TAATTGATTGTTCATGGTGT+AGG | + | chr5_2:1634436-1634455 | Msa0748400:intron | 30.0% | |
| ! | TCTTCCAGTTTTCTTAATCT+AGG | - | chr5_2:1634923-1634942 | None:intergenic | 30.0% |
| AGATCAATCACAAATTCTCT+TGG | + | chr5_2:1634966-1634985 | Msa0748400:CDS | 30.0% | |
| GCCTTTAGATAACATTGTAG+TGG | - | chr5_2:1633315-1633334 | None:intergenic | 35.0% | |
| !!! | GGTTTTAGGAATGTTTTGGA+TGG | - | chr5_2:1633339-1633358 | None:intergenic | 35.0% |
| !!! | TTGGGGTTTTAGGAATGTTT+TGG | - | chr5_2:1633343-1633362 | None:intergenic | 35.0% |
| ! | AGACATTGAGTGTGTCTTTT+GGG | - | chr5_2:1633361-1633380 | None:intergenic | 35.0% |
| !!! | GATTATCTTGTGGTTTTGGT+CGG | + | chr5_2:1633564-1633583 | Msa0748400:CDS | 35.0% |
| TTTATCCATGTTTGGTACGT+AGG | - | chr5_2:1633615-1633634 | None:intergenic | 35.0% | |
| ! | CCAACTTGTTTATCCATGTT+TGG | - | chr5_2:1633623-1633642 | None:intergenic | 35.0% |
| CCAAACATGGATAAACAAGT+TGG | + | chr5_2:1633620-1633639 | Msa0748400:CDS | 35.0% | |
| ! | ACATGGATAAACAAGTTGGA+TGG | + | chr5_2:1633624-1633643 | Msa0748400:CDS | 35.0% |
| ! | ATAAACAAGTTGGATGGAGT+TGG | + | chr5_2:1633630-1633649 | Msa0748400:CDS | 35.0% |
| ! | TCCATGTCTATTTTCTTCAG+CGG | - | chr5_2:1633709-1633728 | None:intergenic | 35.0% |
| ATCCAATATTTGATTGGAGC+TGG | + | chr5_2:1633792-1633811 | Msa0748400:CDS | 35.0% | |
| ! | CGTTAGTTTGGCAAATGTAT+GGG | - | chr5_2:1633986-1634005 | None:intergenic | 35.0% |
| ! | TCGTTAGTTTGGCAAATGTA+TGG | - | chr5_2:1633987-1634006 | None:intergenic | 35.0% |
| GCATAATATATGCAAAGGTC+CGG | + | chr5_2:1634230-1634249 | Msa0748400:intron | 35.0% | |
| CATAATATATGCAAAGGTCC+GGG | + | chr5_2:1634231-1634250 | Msa0748400:intron | 35.0% | |
| TGTACACAAAACCCATGTAT+GGG | - | chr5_2:1634481-1634500 | None:intergenic | 35.0% | |
| ! | AATCTTGCGATGCATCATTT+TGG | - | chr5_2:1634696-1634715 | None:intergenic | 35.0% |
| TAGAGTTCTTGATTAGACGA+TGG | + | chr5_2:1634828-1634847 | Msa0748400:CDS | 35.0% | |
| TGCACCTAGATTAAGAAAAC+TGG | + | chr5_2:1634916-1634935 | Msa0748400:CDS | 35.0% | |
| GCCTTTAGATAACATTGTAG+TGG | - | chr5_2:1633315-1633334 | None:intergenic | 35.0% | |
| !!! | GGTTTTAGGAATGTTTTGGA+TGG | - | chr5_2:1633339-1633358 | None:intergenic | 35.0% |
| !!! | TTGGGGTTTTAGGAATGTTT+TGG | - | chr5_2:1633343-1633362 | None:intergenic | 35.0% |
| ! | AGACATTGAGTGTGTCTTTT+GGG | - | chr5_2:1633361-1633380 | None:intergenic | 35.0% |
| !!! | GATTATCTTGTGGTTTTGGT+CGG | + | chr5_2:1633564-1633583 | Msa0748400:CDS | 35.0% |
| TTTATCCATGTTTGGTACGT+AGG | - | chr5_2:1633615-1633634 | None:intergenic | 35.0% | |
| ! | CCAACTTGTTTATCCATGTT+TGG | - | chr5_2:1633623-1633642 | None:intergenic | 35.0% |
| CCAAACATGGATAAACAAGT+TGG | + | chr5_2:1633620-1633639 | Msa0748400:CDS | 35.0% | |
| ! | ACATGGATAAACAAGTTGGA+TGG | + | chr5_2:1633624-1633643 | Msa0748400:CDS | 35.0% |
| ! | ATAAACAAGTTGGATGGAGT+TGG | + | chr5_2:1633630-1633649 | Msa0748400:CDS | 35.0% |
| ! | TCCATGTCTATTTTCTTCAG+CGG | - | chr5_2:1633709-1633728 | None:intergenic | 35.0% |
| ATCCAATATTTGATTGGAGC+TGG | + | chr5_2:1633792-1633811 | Msa0748400:CDS | 35.0% | |
| ! | CGTTAGTTTGGCAAATGTAT+GGG | - | chr5_2:1633986-1634005 | None:intergenic | 35.0% |
| ! | TCGTTAGTTTGGCAAATGTA+TGG | - | chr5_2:1633987-1634006 | None:intergenic | 35.0% |
| GCATAATATATGCAAAGGTC+CGG | + | chr5_2:1634230-1634249 | Msa0748400:intron | 35.0% | |
| CATAATATATGCAAAGGTCC+GGG | + | chr5_2:1634231-1634250 | Msa0748400:intron | 35.0% | |
| TGTACACAAAACCCATGTAT+GGG | - | chr5_2:1634481-1634500 | None:intergenic | 35.0% | |
| ! | AATCTTGCGATGCATCATTT+TGG | - | chr5_2:1634696-1634715 | None:intergenic | 35.0% |
| TAGAGTTCTTGATTAGACGA+TGG | + | chr5_2:1634828-1634847 | Msa0748400:CDS | 35.0% | |
| TGCACCTAGATTAAGAAAAC+TGG | + | chr5_2:1634916-1634935 | Msa0748400:CDS | 35.0% | |
| !!! | AGTGTGTCTTTTGGGGTTTT+AGG | - | chr5_2:1633353-1633372 | None:intergenic | 40.0% |
| ! | GACATTGAGTGTGTCTTTTG+GGG | - | chr5_2:1633360-1633379 | None:intergenic | 40.0% |
| ! | GAGACATTGAGTGTGTCTTT+TGG | - | chr5_2:1633362-1633381 | None:intergenic | 40.0% |
| TTCACAAAGTGTGTTGCCAT+TGG | + | chr5_2:1633422-1633441 | Msa0748400:CDS | 40.0% | |
| GAGTCTGGCAACAAATTATG+TGG | - | chr5_2:1633474-1633493 | None:intergenic | 40.0% | |
| ! | CACTTGATGGATGAACTCAT+CGG | - | chr5_2:1633508-1633527 | None:intergenic | 40.0% |
| GCTTCCAGATGATTATCTTG+TGG | + | chr5_2:1633554-1633573 | Msa0748400:CDS | 40.0% | |
| ACCGCTGAAGAAAATAGACA+TGG | + | chr5_2:1633705-1633724 | Msa0748400:CDS | 40.0% | |
| TGCCAGCTCCAATCAAATAT+TGG | - | chr5_2:1633797-1633816 | None:intergenic | 40.0% | |
| ATATTTGATTGGAGCTGGCA+TGG | + | chr5_2:1633797-1633816 | Msa0748400:CDS | 40.0% | |
| CTTTGTGAGCTTAACTCAGT+TGG | + | chr5_2:1634197-1634216 | Msa0748400:intron | 40.0% | |
| !!! | TGTCTTTTTTTTGCGGTGGT+CGG | - | chr5_2:1634266-1634285 | None:intergenic | 40.0% |
| ATTGTTCATGGTGTAGGATG+TGG | + | chr5_2:1634442-1634461 | Msa0748400:intron | 40.0% | |
| TTGTTCATGGTGTAGGATGT+GGG | + | chr5_2:1634443-1634462 | Msa0748400:intron | 40.0% | |
| TACCGAAAACAACCCATACA+TGG | + | chr5_2:1634466-1634485 | Msa0748400:CDS | 40.0% | |
| ACCGAAAACAACCCATACAT+GGG | + | chr5_2:1634467-1634486 | Msa0748400:CDS | 40.0% | |
| !! | ACCCATGTATGGGTTGTTTT+CGG | - | chr5_2:1634471-1634490 | None:intergenic | 40.0% |
| GTGTACACAAAACCCATGTA+TGG | - | chr5_2:1634482-1634501 | None:intergenic | 40.0% | |
| GAATGCATATGTGAGGATTG+TGG | + | chr5_2:1634625-1634644 | Msa0748400:CDS | 40.0% | |
| ! | AAAAATGATCGAAGAGGCGT+GGG | - | chr5_2:1634754-1634773 | None:intergenic | 40.0% |
| CTGCAGAAAAATGATCGAAG+AGG | - | chr5_2:1634760-1634779 | None:intergenic | 40.0% | |
| !! | CTTCGATCATTTTTCTGCAG+TGG | + | chr5_2:1634760-1634779 | Msa0748400:CDS | 40.0% |
| CTTGATTAGACGATGGAGAT+TGG | + | chr5_2:1634835-1634854 | Msa0748400:CDS | 40.0% | |
| ATGGAGATTGGAGAAGATTG+AGG | + | chr5_2:1634847-1634866 | Msa0748400:CDS | 40.0% | |
| TGGAGATTGGAGAAGATTGA+GGG | + | chr5_2:1634848-1634867 | Msa0748400:CDS | 40.0% | |
| GAGAGCAATTAGACGAAAGT+GGG | - | chr5_2:1635142-1635161 | None:intergenic | 40.0% | |
| TGAGAGCAATTAGACGAAAG+TGG | - | chr5_2:1635143-1635162 | None:intergenic | 40.0% | |
| !!! | AGTGTGTCTTTTGGGGTTTT+AGG | - | chr5_2:1633353-1633372 | None:intergenic | 40.0% |
| ! | GACATTGAGTGTGTCTTTTG+GGG | - | chr5_2:1633360-1633379 | None:intergenic | 40.0% |
| ! | GAGACATTGAGTGTGTCTTT+TGG | - | chr5_2:1633362-1633381 | None:intergenic | 40.0% |
| TTCACAAAGTGTGTTGCCAT+TGG | + | chr5_2:1633422-1633441 | Msa0748400:CDS | 40.0% | |
| GAGTCTGGCAACAAATTATG+TGG | - | chr5_2:1633474-1633493 | None:intergenic | 40.0% | |
| ! | CACTTGATGGATGAACTCAT+CGG | - | chr5_2:1633508-1633527 | None:intergenic | 40.0% |
| GCTTCCAGATGATTATCTTG+TGG | + | chr5_2:1633554-1633573 | Msa0748400:CDS | 40.0% | |
| ACCGCTGAAGAAAATAGACA+TGG | + | chr5_2:1633705-1633724 | Msa0748400:CDS | 40.0% | |
| TGCCAGCTCCAATCAAATAT+TGG | - | chr5_2:1633797-1633816 | None:intergenic | 40.0% | |
| ATATTTGATTGGAGCTGGCA+TGG | + | chr5_2:1633797-1633816 | Msa0748400:CDS | 40.0% | |
| CTTTGTGAGCTTAACTCAGT+TGG | + | chr5_2:1634197-1634216 | Msa0748400:intron | 40.0% | |
| !!! | TGTCTTTTTTTTGCGGTGGT+CGG | - | chr5_2:1634266-1634285 | None:intergenic | 40.0% |
| ATTGTTCATGGTGTAGGATG+TGG | + | chr5_2:1634442-1634461 | Msa0748400:intron | 40.0% | |
| TTGTTCATGGTGTAGGATGT+GGG | + | chr5_2:1634443-1634462 | Msa0748400:intron | 40.0% | |
| TACCGAAAACAACCCATACA+TGG | + | chr5_2:1634466-1634485 | Msa0748400:CDS | 40.0% | |
| ACCGAAAACAACCCATACAT+GGG | + | chr5_2:1634467-1634486 | Msa0748400:CDS | 40.0% | |
| !! | ACCCATGTATGGGTTGTTTT+CGG | - | chr5_2:1634471-1634490 | None:intergenic | 40.0% |
| GTGTACACAAAACCCATGTA+TGG | - | chr5_2:1634482-1634501 | None:intergenic | 40.0% | |
| GAATGCATATGTGAGGATTG+TGG | + | chr5_2:1634625-1634644 | Msa0748400:CDS | 40.0% | |
| ! | AAAAATGATCGAAGAGGCGT+GGG | - | chr5_2:1634754-1634773 | None:intergenic | 40.0% |
| CTGCAGAAAAATGATCGAAG+AGG | - | chr5_2:1634760-1634779 | None:intergenic | 40.0% | |
| !! | CTTCGATCATTTTTCTGCAG+TGG | + | chr5_2:1634760-1634779 | Msa0748400:CDS | 40.0% |
| CTTGATTAGACGATGGAGAT+TGG | + | chr5_2:1634835-1634854 | Msa0748400:CDS | 40.0% | |
| ATGGAGATTGGAGAAGATTG+AGG | + | chr5_2:1634847-1634866 | Msa0748400:CDS | 40.0% | |
| TGGAGATTGGAGAAGATTGA+GGG | + | chr5_2:1634848-1634867 | Msa0748400:CDS | 40.0% | |
| GAGAGCAATTAGACGAAAGT+GGG | - | chr5_2:1635142-1635161 | None:intergenic | 40.0% | |
| TGAGAGCAATTAGACGAAAG+TGG | - | chr5_2:1635143-1635162 | None:intergenic | 40.0% | |
| CAACAATATGCACCCATGCA+TGG | + | chr5_2:1633286-1633305 | Msa0748400:CDS | 45.0% | |
| ! | TTGTAGTGGAGTCCATGCAT+GGG | - | chr5_2:1633301-1633320 | None:intergenic | 45.0% |
| ! | ATTGTAGTGGAGTCCATGCA+TGG | - | chr5_2:1633302-1633321 | None:intergenic | 45.0% |
| ! | TGATGGATGAACTCATCGGA+AGG | - | chr5_2:1633504-1633523 | None:intergenic | 45.0% |
| TGAGTTCATCCATCAAGTGC+AGG | + | chr5_2:1633509-1633528 | Msa0748400:CDS | 45.0% | |
| !!! | TATCTTGTGGTTTTGGTCGG+TGG | + | chr5_2:1633567-1633586 | Msa0748400:CDS | 45.0% |
| CATTGCCTACGTACCAAACA+TGG | + | chr5_2:1633607-1633626 | Msa0748400:CDS | 45.0% | |
| TGGTTCAAGTCTCACACCAT+GGG | + | chr5_2:1633662-1633681 | Msa0748400:CDS | 45.0% | |
| CATGCACATATCAACTCGAC+CGG | - | chr5_2:1633760-1633779 | None:intergenic | 45.0% | |
| TGCACTCGTAACACGTATGT+GGG | - | chr5_2:1634064-1634083 | None:intergenic | 45.0% | |
| !!! | GTCTTTTTTTTGCGGTGGTC+GGG | - | chr5_2:1634265-1634284 | None:intergenic | 45.0% |
| !!! | GTGGTGTCTTTTTTTTGCGG+TGG | - | chr5_2:1634270-1634289 | None:intergenic | 45.0% |
| AAATGTGGCTCGCTCTTGAA+AGG | - | chr5_2:1634507-1634526 | None:intergenic | 45.0% | |
| TCTCTTTAGCCAACCTACCT+AGG | - | chr5_2:1634544-1634563 | None:intergenic | 45.0% | |
| GTCACGAGAATGCATATGTG+AGG | + | chr5_2:1634618-1634637 | Msa0748400:CDS | 45.0% | |
| !!! | GCGATGCATCATTTTGGCTA+TGG | - | chr5_2:1634690-1634709 | None:intergenic | 45.0% |
| TCCATCATGCATCAAGTGAG+CGG | - | chr5_2:1634726-1634745 | None:intergenic | 45.0% | |
| GAAAAATGATCGAAGAGGCG+TGG | - | chr5_2:1634755-1634774 | None:intergenic | 45.0% | |
| ATTGAGGGTTTGACAAGCGA+AGG | + | chr5_2:1634863-1634882 | Msa0748400:CDS | 45.0% | |
| CATGCACAAGAGTTTGTGTG+TGG | + | chr5_2:1634890-1634909 | Msa0748400:CDS | 45.0% | |
| !! | AAACTGGAAGAGCGTCTTGA+TGG | + | chr5_2:1634932-1634951 | Msa0748400:CDS | 45.0% |
| !! | AACTGGAAGAGCGTCTTGAT+GGG | + | chr5_2:1634933-1634952 | Msa0748400:CDS | 45.0% |
| ! | ATTAGACGAAAGTGGGCTCA+TGG | - | chr5_2:1635135-1635154 | None:intergenic | 45.0% |
| CAACAATATGCACCCATGCA+TGG | + | chr5_2:1633286-1633305 | Msa0748400:CDS | 45.0% | |
| ! | TTGTAGTGGAGTCCATGCAT+GGG | - | chr5_2:1633301-1633320 | None:intergenic | 45.0% |
| ! | ATTGTAGTGGAGTCCATGCA+TGG | - | chr5_2:1633302-1633321 | None:intergenic | 45.0% |
| ! | TGATGGATGAACTCATCGGA+AGG | - | chr5_2:1633504-1633523 | None:intergenic | 45.0% |
| TGAGTTCATCCATCAAGTGC+AGG | + | chr5_2:1633509-1633528 | Msa0748400:CDS | 45.0% | |
| !!! | TATCTTGTGGTTTTGGTCGG+TGG | + | chr5_2:1633567-1633586 | Msa0748400:CDS | 45.0% |
| CATTGCCTACGTACCAAACA+TGG | + | chr5_2:1633607-1633626 | Msa0748400:CDS | 45.0% | |
| TGGTTCAAGTCTCACACCAT+GGG | + | chr5_2:1633662-1633681 | Msa0748400:CDS | 45.0% | |
| CATGCACATATCAACTCGAC+CGG | - | chr5_2:1633760-1633779 | None:intergenic | 45.0% | |
| TGCACTCGTAACACGTATGT+GGG | - | chr5_2:1634064-1634083 | None:intergenic | 45.0% | |
| !!! | GTCTTTTTTTTGCGGTGGTC+GGG | - | chr5_2:1634265-1634284 | None:intergenic | 45.0% |
| !!! | GTGGTGTCTTTTTTTTGCGG+TGG | - | chr5_2:1634270-1634289 | None:intergenic | 45.0% |
| AAATGTGGCTCGCTCTTGAA+AGG | - | chr5_2:1634507-1634526 | None:intergenic | 45.0% | |
| TCTCTTTAGCCAACCTACCT+AGG | - | chr5_2:1634544-1634563 | None:intergenic | 45.0% | |
| GTCACGAGAATGCATATGTG+AGG | + | chr5_2:1634618-1634637 | Msa0748400:CDS | 45.0% | |
| !!! | GCGATGCATCATTTTGGCTA+TGG | - | chr5_2:1634690-1634709 | None:intergenic | 45.0% |
| TCCATCATGCATCAAGTGAG+CGG | - | chr5_2:1634726-1634745 | None:intergenic | 45.0% | |
| GAAAAATGATCGAAGAGGCG+TGG | - | chr5_2:1634755-1634774 | None:intergenic | 45.0% | |
| ATTGAGGGTTTGACAAGCGA+AGG | + | chr5_2:1634863-1634882 | Msa0748400:CDS | 45.0% | |
| CATGCACAAGAGTTTGTGTG+TGG | + | chr5_2:1634890-1634909 | Msa0748400:CDS | 45.0% | |
| !! | AAACTGGAAGAGCGTCTTGA+TGG | + | chr5_2:1634932-1634951 | Msa0748400:CDS | 45.0% |
| !! | AACTGGAAGAGCGTCTTGAT+GGG | + | chr5_2:1634933-1634952 | Msa0748400:CDS | 45.0% |
| ! | ATTAGACGAAAGTGGGCTCA+TGG | - | chr5_2:1635135-1635154 | None:intergenic | 45.0% |
| GTTGCCATTGGTCAAACCTG+TGG | + | chr5_2:1633434-1633453 | Msa0748400:CDS | 50.0% | |
| TCCTCCACAGGTTTGACCAA+TGG | - | chr5_2:1633441-1633460 | None:intergenic | 50.0% | |
| TCAAACCTGTGGAGGAATGC+TGG | + | chr5_2:1633445-1633464 | Msa0748400:CDS | 50.0% | |
| TCGGAAGGTAGTGATGAGTC+TGG | - | chr5_2:1633489-1633508 | None:intergenic | 50.0% | |
| GTACGTAGGCAATGCTTCCT+CGG | - | chr5_2:1633601-1633620 | None:intergenic | 50.0% | |
| CTGGTTCAAGTCTCACACCA+TGG | + | chr5_2:1633661-1633680 | Msa0748400:CDS | 50.0% | |
| ! | GTCTCACACCATGGGCTATA+TGG | + | chr5_2:1633670-1633689 | Msa0748400:CDS | 50.0% |
| CTGCACTCGTAACACGTATG+TGG | - | chr5_2:1634065-1634084 | None:intergenic | 50.0% | |
| CACATACGTGTTACGAGTGC+AGG | + | chr5_2:1634063-1634082 | Msa0748400:intron | 50.0% | |
| CGAGCCACATTTGTGTCACA+CGG | + | chr5_2:1634515-1634534 | Msa0748400:CDS | 50.0% | |
| GTTGCCGTGTGACACAAATG+TGG | - | chr5_2:1634522-1634541 | None:intergenic | 50.0% | |
| TTTGTGTCACACGGCAACCT+AGG | + | chr5_2:1634524-1634543 | Msa0748400:CDS | 50.0% | |
| ! | GGTAGGTTGGCTAAAGAGAG+AGG | + | chr5_2:1634545-1634564 | Msa0748400:CDS | 50.0% |
| CTCTCACTTGCACGCATATG+CGG | + | chr5_2:1634572-1634591 | Msa0748400:CDS | 50.0% | |
| TCTCACTTGCACGCATATGC+GGG | + | chr5_2:1634573-1634592 | Msa0748400:CDS | 50.0% | |
| ! | TCTAGAAGTTGATCCCACCG+AGG | + | chr5_2:1634655-1634674 | Msa0748400:CDS | 50.0% |
| CCATCATGCATCAAGTGAGC+GGG | - | chr5_2:1634725-1634744 | None:intergenic | 50.0% | |
| TCTGCAGTGGCACAACGTAT+TGG | + | chr5_2:1634773-1634792 | Msa0748400:CDS | 50.0% | |
| GTTGCCATTGGTCAAACCTG+TGG | + | chr5_2:1633434-1633453 | Msa0748400:CDS | 50.0% | |
| TCCTCCACAGGTTTGACCAA+TGG | - | chr5_2:1633441-1633460 | None:intergenic | 50.0% | |
| TCAAACCTGTGGAGGAATGC+TGG | + | chr5_2:1633445-1633464 | Msa0748400:CDS | 50.0% | |
| TCGGAAGGTAGTGATGAGTC+TGG | - | chr5_2:1633489-1633508 | None:intergenic | 50.0% | |
| GTACGTAGGCAATGCTTCCT+CGG | - | chr5_2:1633601-1633620 | None:intergenic | 50.0% | |
| CTGGTTCAAGTCTCACACCA+TGG | + | chr5_2:1633661-1633680 | Msa0748400:CDS | 50.0% | |
| ! | GTCTCACACCATGGGCTATA+TGG | + | chr5_2:1633670-1633689 | Msa0748400:CDS | 50.0% |
| CTGCACTCGTAACACGTATG+TGG | - | chr5_2:1634065-1634084 | None:intergenic | 50.0% | |
| CACATACGTGTTACGAGTGC+AGG | + | chr5_2:1634063-1634082 | Msa0748400:intron | 50.0% | |
| CGAGCCACATTTGTGTCACA+CGG | + | chr5_2:1634515-1634534 | Msa0748400:CDS | 50.0% | |
| GTTGCCGTGTGACACAAATG+TGG | - | chr5_2:1634522-1634541 | None:intergenic | 50.0% | |
| TTTGTGTCACACGGCAACCT+AGG | + | chr5_2:1634524-1634543 | Msa0748400:CDS | 50.0% | |
| ! | GGTAGGTTGGCTAAAGAGAG+AGG | + | chr5_2:1634545-1634564 | Msa0748400:CDS | 50.0% |
| CTCTCACTTGCACGCATATG+CGG | + | chr5_2:1634572-1634591 | Msa0748400:CDS | 50.0% | |
| TCTCACTTGCACGCATATGC+GGG | + | chr5_2:1634573-1634592 | Msa0748400:CDS | 50.0% | |
| ! | TCTAGAAGTTGATCCCACCG+AGG | + | chr5_2:1634655-1634674 | Msa0748400:CDS | 50.0% |
| CCATCATGCATCAAGTGAGC+GGG | - | chr5_2:1634725-1634744 | None:intergenic | 50.0% | |
| TCTGCAGTGGCACAACGTAT+TGG | + | chr5_2:1634773-1634792 | Msa0748400:CDS | 50.0% | |
| GCCATTGGTCAAACCTGTGG+AGG | + | chr5_2:1633437-1633456 | Msa0748400:CDS | 55.0% | |
| CTCAGCCGTTCGATCTCTCA+GGG | - | chr5_2:1633535-1633554 | None:intergenic | 55.0% | |
| GAGCGTGACCATATAGCCCA+TGG | - | chr5_2:1633681-1633700 | None:intergenic | 55.0% | |
| GGGCTATATGGTCACGCTCT+TGG | + | chr5_2:1633682-1633701 | Msa0748400:CDS | 55.0% | |
| GGTGGTCGGGATTTGAATCC+CGG | - | chr5_2:1634252-1634271 | None:intergenic | 55.0% | |
| TGTCACACGGCAACCTAGGT+AGG | + | chr5_2:1634528-1634547 | Msa0748400:CDS | 55.0% | |
| ACACGGCAACCTAGGTAGGT+TGG | + | chr5_2:1634532-1634551 | Msa0748400:CDS | 55.0% | |
| CGCATATGCGTGCAAGTGAG+AGG | - | chr5_2:1634574-1634593 | None:intergenic | 55.0% | |
| CTCGTGACGCTTCTCATCAG+CGG | - | chr5_2:1634606-1634625 | None:intergenic | 55.0% | |
| AGTTGATCCCACCGAGGCTA+TGG | + | chr5_2:1634661-1634680 | Msa0748400:CDS | 55.0% | |
| CCCGCTCACTTGATGCATGA+TGG | + | chr5_2:1634722-1634741 | Msa0748400:CDS | 55.0% | |
| GCCATTGGTCAAACCTGTGG+AGG | + | chr5_2:1633437-1633456 | Msa0748400:CDS | 55.0% | |
| CTCAGCCGTTCGATCTCTCA+GGG | - | chr5_2:1633535-1633554 | None:intergenic | 55.0% | |
| GAGCGTGACCATATAGCCCA+TGG | - | chr5_2:1633681-1633700 | None:intergenic | 55.0% | |
| GGGCTATATGGTCACGCTCT+TGG | + | chr5_2:1633682-1633701 | Msa0748400:CDS | 55.0% | |
| GGTGGTCGGGATTTGAATCC+CGG | - | chr5_2:1634252-1634271 | None:intergenic | 55.0% | |
| TGTCACACGGCAACCTAGGT+AGG | + | chr5_2:1634528-1634547 | Msa0748400:CDS | 55.0% | |
| ACACGGCAACCTAGGTAGGT+TGG | + | chr5_2:1634532-1634551 | Msa0748400:CDS | 55.0% | |
| CGCATATGCGTGCAAGTGAG+AGG | - | chr5_2:1634574-1634593 | None:intergenic | 55.0% | |
| CTCGTGACGCTTCTCATCAG+CGG | - | chr5_2:1634606-1634625 | None:intergenic | 55.0% | |
| AGTTGATCCCACCGAGGCTA+TGG | + | chr5_2:1634661-1634680 | Msa0748400:CDS | 55.0% | |
| CCCGCTCACTTGATGCATGA+TGG | + | chr5_2:1634722-1634741 | Msa0748400:CDS | 55.0% | |
| CTCTCAGGGCCTGCACTTGA+TGG | - | chr5_2:1633521-1633540 | None:intergenic | 60.0% | |
| GCAGGCCCTGAGAGATCGAA+CGG | + | chr5_2:1633527-1633546 | Msa0748400:CDS | 60.0% | |
| GCTCAGCCGTTCGATCTCTC+AGG | - | chr5_2:1633536-1633555 | None:intergenic | 60.0% | |
| GATGGAGTTGGCGACGAGAC+TGG | + | chr5_2:1633642-1633661 | Msa0748400:CDS | 60.0% | |
| TGATCCCACCGAGGCTATGG+TGG | + | chr5_2:1634664-1634683 | Msa0748400:CDS | 60.0% | |
| ATGGCCACCATAGCCTCGGT+GGG | - | chr5_2:1634671-1634690 | None:intergenic | 60.0% | |
| TATGGCCACCATAGCCTCGG+TGG | - | chr5_2:1634672-1634691 | None:intergenic | 60.0% | |
| GGCTATGGCCACCATAGCCT+CGG | - | chr5_2:1634675-1634694 | None:intergenic | 60.0% | |
| CTCTCAGGGCCTGCACTTGA+TGG | - | chr5_2:1633521-1633540 | None:intergenic | 60.0% | |
| GCAGGCCCTGAGAGATCGAA+CGG | + | chr5_2:1633527-1633546 | Msa0748400:CDS | 60.0% | |
| GCTCAGCCGTTCGATCTCTC+AGG | - | chr5_2:1633536-1633555 | None:intergenic | 60.0% | |
| GATGGAGTTGGCGACGAGAC+TGG | + | chr5_2:1633642-1633661 | Msa0748400:CDS | 60.0% | |
| TGATCCCACCGAGGCTATGG+TGG | + | chr5_2:1634664-1634683 | Msa0748400:CDS | 60.0% | |
| ATGGCCACCATAGCCTCGGT+GGG | - | chr5_2:1634671-1634690 | None:intergenic | 60.0% | |
| TATGGCCACCATAGCCTCGG+TGG | - | chr5_2:1634672-1634691 | None:intergenic | 60.0% | |
| GGCTATGGCCACCATAGCCT+CGG | - | chr5_2:1634675-1634694 | None:intergenic | 60.0% | |
| GGCTGCCAGCATTCCTCCAC+AGG | - | chr5_2:1633453-1633472 | None:intergenic | 65.0% | |
| GGTCGGTGGCATGATCACCG+AGG | + | chr5_2:1633581-1633600 | Msa0748400:CDS | 65.0% | |
| GGCTGCCAGCATTCCTCCAC+AGG | - | chr5_2:1633453-1633472 | None:intergenic | 65.0% | |
| GGTCGGTGGCATGATCACCG+AGG | + | chr5_2:1633581-1633600 | Msa0748400:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 1633258 | 1635168 | 1633258 | ID=Msa0748400;Name=Msa0748400 |
| chr5_2 | mRNA | 1633258 | 1635168 | 1633258 | ID=Msa0748400-mRNA-1;Parent=Msa0748400;Name=Msa0748400-mRNA-1;_AED=0.00;_eAED=0.00;_QI=18|1|1|1|1|1|2|153|366 |
| chr5_2 | exon | 1633258 | 1633818 | 1633258 | ID=Msa0748400-mRNA-1:exon:475;Parent=Msa0748400-mRNA-1 |
| chr5_2 | exon | 1634458 | 1635168 | 1634458 | ID=Msa0748400-mRNA-1:exon:476;Parent=Msa0748400-mRNA-1 |
| chr5_2 | five_prime_UTR | 1633258 | 1633275 | 1633258 | ID=Msa0748400-mRNA-1:five_prime_utr;Parent=Msa0748400-mRNA-1 |
| chr5_2 | CDS | 1633276 | 1633818 | 1633276 | ID=Msa0748400-mRNA-1:cds;Parent=Msa0748400-mRNA-1 |
| chr5_2 | CDS | 1634458 | 1635015 | 1634458 | ID=Msa0748400-mRNA-1:cds;Parent=Msa0748400-mRNA-1 |
| chr5_2 | three_prime_UTR | 1635016 | 1635168 | 1635016 | ID=Msa0748400-mRNA-1:three_prime_utr;Parent=Msa0748400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
