AlfalfaGEDB | Msa0424340

M. sativa cultivar zhongmu-4 / Msa0424340

KEGG: K03921
GO: GO:0005575 GO:0016020
PFAM: PF03405.17

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0424340	XP_003602137.1	84.153	366	54	2	1	363	1	365	0.0	638

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0424340	sp\|Q84VY3\|STAD6_ARATH	69.591	342	99	2	26	362	44	385	1.63e-176	498

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0424340	G7J5N4	84.153	366	54	2	1	363	1	365	0.0	638

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0006980	Msa0424340	0.862818	3.870626e-64	-8.615850e-47
Msa0015710	Msa0424340	0.818957	1.494600e-52	-8.615850e-47
Msa0019600	Msa0424340	0.871459	6.725333e-67	-8.615850e-47
Msa0050040	Msa0424340	0.803814	2.912813e-49	-8.615850e-47
Msa0055450	Msa0424340	0.821676	3.558077e-53	-8.615850e-47
Msa0066320	Msa0424340	0.834041	3.769534e-56	-8.615850e-47
Msa0074800	Msa0424340	0.830383	3.029223e-55	-8.615850e-47
Msa0080990	Msa0424340	0.805110	1.563710e-49	-8.615850e-47
Msa0102990	Msa0424340	0.802821	4.676811e-49	-8.615850e-47
Msa0109880	Msa0424340	0.829052	6.387616e-55	-8.615850e-47
Msa0111750	Msa0424340	0.845953	2.944748e-59	-8.615850e-47
Msa0124130	Msa0424340	0.877841	4.544521e-69	-8.615850e-47
Msa0125170	Msa0424340	0.803920	2.768594e-49	-8.615850e-47
Msa0141120	Msa0424340	0.857300	1.792915e-62	-8.615850e-47
Msa0149140	Msa0424340	0.881931	1.592286e-70	-8.615850e-47
Msa0152480	Msa0424340	0.823387	1.423641e-53	-8.615850e-47
Msa0152500	Msa0424340	0.841823	3.762251e-58	-8.615850e-47
Msa0156250	Msa0424340	0.839937	1.175128e-57	-8.615850e-47
Msa0185490	Msa0424340	0.820794	5.680963e-53	-8.615850e-47
Msa0197100	Msa0424340	0.811987	5.317147e-51	-8.615850e-47
Msa0203030	Msa0424340	0.808961	2.394807e-50	-8.615850e-47
Msa0212080	Msa0424340	0.821186	4.615801e-53	-8.615850e-47
Msa0212150	Msa0424340	0.847954	8.338603e-60	-8.615850e-47
Msa0215640	Msa0424340	0.828637	8.046400e-55	-8.615850e-47
Msa0217230	Msa0424340	0.803624	3.190370e-49	-8.615850e-47
Msa0219190	Msa0424340	0.808972	2.381473e-50	-8.615850e-47
Msa0221290	Msa0424340	0.804685	1.918552e-49	-8.615850e-47
Msa0373960	Msa0424340	0.824067	9.863410e-54	-8.615850e-47
Msa0375680	Msa0424340	0.809227	2.099651e-50	-8.615850e-47
Msa0375700	Msa0424340	0.804214	2.405212e-49	-8.615850e-47
Msa0392420	Msa0424340	0.825737	3.982486e-54	-8.615850e-47
Msa0392460	Msa0424340	0.821232	4.504926e-53	-8.615850e-47
Msa0392490	Msa0424340	0.822782	1.969911e-53	-8.615850e-47
Msa0406000	Msa0424340	0.913727	4.400298e-84	-8.615850e-47
Msa0423100	Msa0424340	0.810400	1.174753e-50	-8.615850e-47
Msa0424330	Msa0424340	0.896350	4.014663e-76	-8.615850e-47
Msa0424340	Msa0424350	0.898660	4.268440e-77	-8.615850e-47
Msa0424340	Msa0441590	0.833286	5.820641e-56	-8.615850e-47
Msa0424340	Msa0451400	0.912907	1.136896e-83	-8.615850e-47
Msa0424340	Msa0469260	0.806445	8.197663e-50	-8.615850e-47
Msa0424340	Msa0487570	0.829518	4.923047e-55	-8.615850e-47
Msa0424340	Msa0487630	0.817907	2.584857e-52	-8.615850e-47
Msa0424340	Msa0492190	0.896430	3.717686e-76	-8.615850e-47
Msa0424340	Msa0515950	0.893101	8.597015e-75	-8.615850e-47
Msa0424340	Msa0534930	0.851437	8.881694e-61	-8.615850e-47
Msa0424340	Msa0535040	0.824238	8.993454e-54	-8.615850e-47
Msa0424340	Msa0537920	0.811944	5.434278e-51	-8.615850e-47
Msa0424340	Msa0575740	0.843294	1.530389e-58	-8.615850e-47
Msa0424340	Msa0591790	0.871884	4.864114e-67	-8.615850e-47
Msa0424340	Msa0591800	0.832800	7.689066e-56	-8.615850e-47
Msa0424340	Msa0594090	0.855584	5.720719e-62	-8.615850e-47
Msa0424340	Msa0641250	0.827313	1.676403e-54	-8.615850e-47
Msa0424340	Msa0669840	0.884674	1.567035e-71	-8.615850e-47
Msa0424340	Msa0707220	0.806432	8.250312e-50	-8.615850e-47
Msa0424340	Msa0709450	0.840879	6.664048e-58	-8.615850e-47
Msa0424340	Msa0711320	0.819368	1.205140e-52	-8.615850e-47
Msa0424340	Msa0725860	0.829743	4.339089e-55	-8.615850e-47
Msa0424340	Msa0739580	0.881881	1.660474e-70	-8.615850e-47
Msa0424340	Msa0748000	0.802314	5.948695e-49	-8.615850e-47
Msa0424340	Msa0748400	0.815709	8.045695e-52	-8.615850e-47
Msa0424340	Msa0751890	0.836166	1.097102e-56	-8.615850e-47
Msa0424340	Msa0752840	0.830090	3.571675e-55	-8.615850e-47
Msa0424340	Msa0764820	0.830986	2.155447e-55	-8.615850e-47
Msa0424340	Msa0770290	0.820924	5.305103e-53	-8.615850e-47
Msa0424340	Msa0782360	0.850019	2.225951e-60	-8.615850e-47
Msa0424340	Msa0819890	0.819837	9.415808e-53	-8.615850e-47
Msa0424340	Msa0819900	0.802308	5.967189e-49	-8.615850e-47
Msa0424340	Msa0823400	0.817303	3.535722e-52	-8.615850e-47
Msa0424340	Msa0828830	0.831333	1.771099e-55	-8.615850e-47
Msa0424340	Msa0831940	0.838866	2.228807e-57	-8.615850e-47
Msa0424340	Msa0849280	0.806849	6.736858e-50	-8.615850e-47
Msa0424340	Msa0851020	0.813396	2.614913e-51	-8.615850e-47
Msa0424340	Msa0860170	0.802026	6.818278e-49	-8.615850e-47
Msa0424340	Msa0860280	0.860764	1.645198e-63	-8.615850e-47
Msa0424340	Msa0867350	0.851835	6.848826e-61	-8.615850e-47
Msa0424340	Msa0896350	0.814219	1.721870e-51	-8.615850e-47
Msa0424340	Msa0898730	0.868178	7.919871e-66	-8.615850e-47
Msa0424340	Msa0899950	0.822263	2.601584e-53	-8.615850e-47
Msa0424340	Msa0916640	0.826659	2.402827e-54	-8.615850e-47
Msa0424340	Msa0922750	0.834075	3.696842e-56	-8.615850e-47
Msa0424340	Msa0927120	0.840706	7.396257e-58	-8.615850e-47
Msa0424340	Msa0929870	0.856875	2.393396e-62	-8.615850e-47
Msa0424340	Msa0944760	0.821077	4.891042e-53	-8.615850e-47
Msa0424340	Msa0953540	0.829920	3.929297e-55	-8.615850e-47
Msa0424340	Msa0961560	0.835938	1.253771e-56	-8.615850e-47
Msa0424340	Msa0964840	0.802590	5.218948e-49	-8.615850e-47
Msa0424340	Msa0965310	0.835513	1.606453e-56	-8.615850e-47
Msa0424340	Msa0996270	0.851757	7.206284e-61	-8.615850e-47
Msa0424340	Msa0999300	0.876192	1.697574e-68	-8.615850e-47
Msa0424340	Msa0999320	0.828188	1.032765e-54	-8.615850e-47
Msa0424340	Msa0999340	0.809320	2.005983e-50	-8.615850e-47
Msa0424340	Msa0999350	0.821029	5.017093e-53	-8.615850e-47
Msa0424340	Msa0999360	0.824556	7.571594e-54	-8.615850e-47
Msa0424340	Msa0999390	0.803461	3.447172e-49	-8.615850e-47
Msa0424340	Msa0999400	0.813038	3.132656e-51	-8.615850e-47
Msa0424340	Msa0999410	0.829804	4.192691e-55	-8.615850e-47
Msa0424340	Msa0999700	0.821420	4.075508e-53	-8.615850e-47
Msa0424340	Msa1001870	0.828533	8.529334e-55	-8.615850e-47
Msa0424340	Msa1001890	0.829198	5.885148e-55	-8.615850e-47
Msa0424340	Msa1037770	0.834682	2.602379e-56	-8.615850e-47
Msa0424340	Msa1037890	0.873690	1.209500e-67	-8.615850e-47
Msa0424340	Msa1037900	0.851140	1.077318e-60	-8.615850e-47
Msa0424340	Msa1037910	0.837902	3.952242e-57	-8.615850e-47
Msa0424340	Msa1081570	0.803593	3.236694e-49	-8.615850e-47
Msa0424340	Msa1084520	0.857112	2.036951e-62	-8.615850e-47
Msa0424340	Msa1092020	0.806661	7.381309e-50	-8.615850e-47
Msa0424340	Msa1125810	0.836852	7.341381e-57	-8.615850e-47
Msa0424340	Msa1127140	0.802172	6.364613e-49	-8.615850e-47
Msa0424340	Msa1129950	0.824004	1.020562e-53	-8.615850e-47
Msa0424340	Msa1129960	0.830501	2.835036e-55	-8.615850e-47
Msa0424340	Msa1129970	0.834066	3.715450e-56	-8.615850e-47
Msa0424340	Msa1130010	0.856152	3.903758e-62	-8.615850e-47
Msa0424340	Msa1134660	0.808646	2.795609e-50	-8.615850e-47
Msa0424340	Msa1135380	0.817626	2.990689e-52	-8.615850e-47
Msa0424340	Msa1145020	0.831873	1.304098e-55	-8.615850e-47
Msa0424340	Msa1145410	0.814780	1.294198e-51	-8.615850e-47
Msa0424340	Msa1171310	0.844850	5.854510e-59	-8.615850e-47
Msa0424340	Msa1201110	0.844391	7.785596e-59	-8.615850e-47
Msa0424340	Msa1201160	0.887076	1.960115e-72	-8.615850e-47
Msa0424340	Msa1228190	0.862875	3.716198e-64	-8.615850e-47
Msa0424340	Msa1271260	0.843284	1.540113e-58	-8.615850e-47
Msa0424340	Msa1294290	0.875781	2.349972e-68	-8.615850e-47
Msa0424340	Msa1305510	0.867059	1.808215e-65	-8.615850e-47
Msa0424340	Msa1378870	0.841921	3.544084e-58	-8.615850e-47
Msa0424340	Msa1379970	0.835169	1.962639e-56	-8.615850e-47
Msa0424340	Msa1389050	0.834249	3.342409e-56	-8.615850e-47
Msa0424340	Msa1394890	0.827243	1.742223e-54	-8.615850e-47
Msa0424340	Msa1406780	0.873826	1.088434e-67	-8.615850e-47
Msa0424340	Msa1420060	0.828301	9.699149e-55	-8.615850e-47
Msa0424340	Msa1421550	0.859386	4.287513e-63	-8.615850e-47
Msa0424340	Msa1423460	0.823580	1.283463e-53	-8.615850e-47
Msa0424340	Msa1431850	0.879981	7.993142e-70	-8.615850e-47
Msa0424340	Msa1435480	0.827346	1.645708e-54	-8.615850e-47
Msa0424340	Msa1449940	0.806127	9.563576e-50	-8.615850e-47
Msa0424340	Msa1455320	0.842423	2.609797e-58	-8.615850e-47
Msa0424340	Msa1458910	0.809191	2.137370e-50	-8.615850e-47
Msa0424340	Msa1459530	0.811080	8.373243e-51	-8.615850e-47
Msa0424340	Msa1461060	0.839534	1.495945e-57	-8.615850e-47
Msa0424340	Msa1462530	0.808426	3.114980e-50	-8.615850e-47
Msa0239030	Msa0424340	0.822098	2.840778e-53	-8.615850e-47
Msa0252630	Msa0424340	0.838575	2.651102e-57	-8.615850e-47
Msa0252770	Msa0424340	0.849749	2.647968e-60	-8.615850e-47
Msa0276740	Msa0424340	0.803779	2.961328e-49	-8.615850e-47
Msa0280750	Msa0424340	0.807028	6.174720e-50	-8.615850e-47
Msa0289920	Msa0424340	0.844388	7.796646e-59	-8.615850e-47
Msa0291330	Msa0424340	0.824908	6.253162e-54	-8.615850e-47
Msa0298240	Msa0424340	0.821822	3.290362e-53	-8.615850e-47
Msa0306120	Msa0424340	0.854330	1.322863e-61	-8.615850e-47
Msa0316680	Msa0424340	0.814475	1.511506e-51	-8.615850e-47
Msa0322830	Msa0424340	0.803412	3.529896e-49	-8.615850e-47
Msa0322840	Msa0424340	0.821608	3.688886e-53	-8.615850e-47
Msa0322860	Msa0424340	0.823516	1.328090e-53	-8.615850e-47
Msa0329620	Msa0424340	0.857114	2.034271e-62	-8.615850e-47
Msa0333700	Msa0424340	0.835194	1.933915e-56	-8.615850e-47
Msa0343660	Msa0424340	0.843065	1.762266e-58	-8.615850e-47
Msa0344570	Msa0424340	0.813575	2.388104e-51	-8.615850e-47
Msa0351770	Msa0424340	0.860032	2.739229e-63	-8.615850e-47
Msa0359250	Msa0424340	0.903288	4.048758e-79	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0424340	MtrunA17_Chr3g0125981	84.153	366	54	2	1	363	1	365	0.0	638
Msa0424340	MtrunA17_Chr3g0126011	76.836	354	79	1	13	363	8	361	0.0	575
Msa0424340	MtrunA17_Chr3g0125991	76.554	354	80	1	13	363	8	361	0.0	568
Msa0424340	MtrunA17_Chr3g0125781	71.038	366	101	2	1	363	1	364	0.0	544
Msa0424340	MtrunA17_Chr1g0159321	73.521	355	89	2	14	363	31	385	0.0	538
Msa0424340	MtrunA17_Chr4g0045661	64.655	348	114	3	15	361	47	386	7.60e-165	466
Msa0424340	MtrunA17_Chr5g0406961	64.655	348	114	3	15	361	98	437	1.09e-164	468

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0424340	AT1G43800.1	69.591	342	99	2	26	362	44	385	1.66e-177	498
Msa0424340	AT2G43710.2	63.401	347	118	3	16	361	56	394	5.06e-159	452
Msa0424340	AT2G43710.1	63.401	347	118	3	16	361	56	394	5.35e-159	452
Msa0424340	AT3G02630.1	63.284	335	119	2	30	362	58	390	2.60e-156	445
Msa0424340	AT3G02610.2	62.722	338	119	4	31	362	71	407	4.58e-154	440
Msa0424340	AT3G02610.1	62.722	338	119	4	31	362	69	405	5.44e-154	439
Msa0424340	AT5G16240.1	61.671	347	122	3	18	362	51	388	9.02e-154	438
Msa0424340	AT5G16230.1	61.494	348	127	5	21	362	49	395	1.04e-153	438
Msa0424340	AT3G02620.2	58.583	367	132	6	15	362	35	400	3.10e-153	437
Msa0424340	AT3G02620.1	58.583	367	132	6	15	362	32	397	3.67e-153	437
Msa0424340	AT5G16230.2	62.813	320	114	4	47	362	1	319	3.67e-147	419
Msa0424340	AT3G02620.3	62.112	322	115	4	47	362	1	321	7.53e-146	416

Find 111 sgRNAs with CRISPR-Local

Find 275 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCATAAACAACTCCCATATA+TGG	0.234894	3_2:+74540826	None:intergenic
AACCGAAAACAACCCATATA+TGG	0.270736	3_2:-74540839	Msa0424340:CDS
CATGCGTTGGTCCTCCTAAT+TGG	0.279698	3_2:+74541757	None:intergenic
TCTTCAAGTCATTAGAGAAT+TGG	0.294846	3_2:-74541650	Msa0424340:CDS
CTTGGACTGCCGAGGAAAAT+AGG	0.302490	3_2:-74541347	Msa0424340:CDS
GAGACATCGAGTGTGTCTTT+TGG	0.332236	3_2:+74541688	None:intergenic
AGACGATTATCTCGTAGTTT+TGG	0.339368	3_2:-74541487	Msa0424340:CDS
TTCTTGTAGCCTCCTAATCT+TGG	0.346688	3_2:+74540384	None:intergenic
CCAGCATTCCTCCACGGGTT+TGG	0.347230	3_2:+74541602	None:intergenic
GATAGCTTGGAGTTCTTGAT+TGG	0.352186	3_2:-74540484	Msa0424340:CDS
CTTCAAGTCATTAGAGAATT+GGG	0.366213	3_2:-74541649	Msa0424340:CDS
ATGGCGATGTGCACCCAATT+AGG	0.366925	3_2:-74541771	Msa0424340:CDS
AGACTATCCAATACTTGATT+GGG	0.379570	3_2:-74541260	Msa0424340:CDS
CAGTCGTGTTTATCCATGAT+TGG	0.392565	3_2:+74541427	None:intergenic
CTTGATTGGATGGTGGAGAT+TGG	0.393418	3_2:-74540470	Msa0424340:CDS
GGGCCGTATGGACACGCTCT+TGG	0.399714	3_2:-74541365	Msa0424340:CDS
TGTGTACTTTCATACTCATA+AGG	0.401963	3_2:+74540297	None:intergenic
AAGACTATCCAATACTTGAT+TGG	0.402496	3_2:-74541261	Msa0424340:CDS
AGATGAAACCCAAGTTTAGT+TGG	0.410051	3_2:-74540339	Msa0424340:CDS
TTGAAAGATCCAACTAAACT+TGG	0.410675	3_2:+74540330	None:intergenic
GTGTTTGTGGTGTAGGATAT+AGG	0.417701	3_2:-74540862	Msa0424340:intron
CTGGGTCAAGCACCAATCCT+TGG	0.433795	3_2:-74541386	Msa0424340:CDS
GATGGGGTTGGAGACGAGAC+TGG	0.438368	3_2:-74541405	Msa0424340:CDS
TTTATCCATGATTGGTACAT+AGG	0.438772	3_2:+74541435	None:intergenic
GGCTGCCAGCATTCCTCCAC+GGG	0.440095	3_2:+74541597	None:intergenic
CCACATATGCGTGCAAGCAC+TGG	0.455964	3_2:+74540733	None:intergenic
AGTGGCAACATAACGATGCC+TGG	0.459250	3_2:-74540601	Msa0424340:CDS
CATTGCCTATGTACCAATCA+TGG	0.460498	3_2:-74541440	Msa0424340:CDS
GTCTTTAGGTGGCATTGTGG+TGG	0.460946	3_2:+74541726	None:intergenic
TCTTGTAGCCTCCTAATCTT+GGG	0.462313	3_2:+74540385	None:intergenic
CAGAACTTATCTCTATCTCT+CGG	0.463166	3_2:-74541310	Msa0424340:CDS
ACACAGTAATATGGCTCGTC+TGG	0.463210	3_2:-74540773	Msa0424340:CDS
TGGGTCAAGCACCAATCCTT+GGG	0.465336	3_2:-74541385	Msa0424340:CDS
ATGGCTAGCATTGTCTCTGT+GGG	0.465790	3_2:+74540637	None:intergenic
TCCTCTGTCGCACAACGCAT+TGG	0.467717	3_2:-74540532	Msa0424340:CDS
TGGAGATTGGAGAAGCTTGA+GGG	0.473304	3_2:-74540457	Msa0424340:CDS
TCATGGATAAACACGACTGA+TGG	0.476917	3_2:-74541423	Msa0424340:CDS
CCAAACCCGTGGAGGAATGC+TGG	0.477344	3_2:-74541602	Msa0424340:CDS
ATGCGTTGGTCCTCCTAATT+GGG	0.477566	3_2:+74541758	None:intergenic
CATAAACAACTCCCATATAT+GGG	0.485393	3_2:+74540827	None:intergenic
GCACCAATCCTTGGGCCGTA+TGG	0.486076	3_2:-74541377	Msa0424340:CDS
ACCGAAAACAACCCATATAT+GGG	0.488585	3_2:-74540838	Msa0424340:CDS
ATCCAATACTTGATTGGGGC+TGG	0.489307	3_2:-74541255	Msa0424340:CDS
TTTGGGATGGGGTCTTTAGG+TGG	0.493746	3_2:+74541715	None:intergenic
TGTCCATACGGCCCAAGGAT+TGG	0.498157	3_2:+74541374	None:intergenic
GTGGGCTTGTACCCAAGATT+AGG	0.500287	3_2:-74540396	Msa0424340:CDS
GCTCGTCTGGCTAAGGAGAC+GGG	0.500860	3_2:-74540760	Msa0424340:CDS
GCTTGGAGTTCTTGATTGGA+TGG	0.504507	3_2:-74540480	Msa0424340:CDS
AGAATATCAAACAATGATGA+TGG	0.504615	3_2:-74541790	Msa0424340:exon
TCAGACGGTAGTGATGAATC+TGG	0.506391	3_2:+74541561	None:intergenic
GGCTCGTCTGGCTAAGGAGA+CGG	0.507004	3_2:-74540761	Msa0424340:CDS
CATGGATAAACACGACTGAT+GGG	0.511697	3_2:-74541422	Msa0424340:CDS
TCCTCCACGGGTTTGGCTAG+AGG	0.519652	3_2:+74541609	None:intergenic
TGCCAGCCCCAATCAAGTAT+TGG	0.523085	3_2:+74541253	None:intergenic
CCAGTGCTTGCACGCATATG+TGG	0.523479	3_2:-74540733	Msa0424340:CDS
GAGAAATTGTCGAAGAGGTG+TGG	0.524084	3_2:+74540553	None:intergenic
TGATAATCAAACACTAGAGT+GGG	0.524096	3_2:+74540234	None:intergenic
GTGGAGATTGGAGAAGCTTG+AGG	0.525896	3_2:-74540458	Msa0424340:CDS
TGGCTGCCAGCATTCCTCCA+CGG	0.529041	3_2:+74541596	None:intergenic
AAAGACACACTCGATGTCTC+CGG	0.531912	3_2:-74541685	Msa0424340:CDS
TTATCTCTATCTCTCGGGTC+GGG	0.532100	3_2:-74541304	Msa0424340:CDS
TAATATGGCTCGTCTGGCTA+AGG	0.539955	3_2:-74540767	Msa0424340:CDS
AAAAGTGGCTCTCTCTTGAA+AGG	0.540914	3_2:+74540801	None:intergenic
TGAAAGATCCAACTAAACTT+GGG	0.543564	3_2:+74540331	None:intergenic
CTTATCTCTATCTCTCGGGT+CGG	0.549286	3_2:-74541305	Msa0424340:CDS
ATTACTGTGTGATACAAAAG+TGG	0.551789	3_2:+74540786	None:intergenic
AGTCCAAGAGCGTGTCCATA+CGG	0.553349	3_2:+74541362	None:intergenic
ACAACGCATTGGTGTGTACA+AGG	0.554128	3_2:-74540521	Msa0424340:CDS
CACTGAGAAACTTCTAGAAG+TGG	0.556565	3_2:-74540662	Msa0424340:CDS
TAGGAGGACCAACGCATGCA+TGG	0.558783	3_2:-74541752	Msa0424340:CDS
GCACTTGATGCATGATGGAC+GGG	0.559175	3_2:-74540578	Msa0424340:CDS
AGAACTTATCTCTATCTCTC+GGG	0.561725	3_2:-74541309	Msa0424340:CDS
AAGCTTGAGGGTTTGACGAG+CGG	0.562088	3_2:-74540445	Msa0424340:CDS
ATACTTGATTGGGGCTGGCA+TGG	0.563662	3_2:-74541250	Msa0424340:intron
CCTGGGCACTTGATGCATGA+TGG	0.563746	3_2:-74540583	Msa0424340:CDS
TAGTGACTACATCGATAGCT+TGG	0.563791	3_2:-74540497	Msa0424340:CDS
CCATCATGCATCAAGTGCCC+AGG	0.564329	3_2:+74540583	None:intergenic
AAAACTACGAGATAATCGTC+TGG	0.564810	3_2:+74541489	None:intergenic
TATGGCTAGCATTGTCTCTG+TGG	0.568288	3_2:+74540636	None:intergenic
GAGCGTGTCCATACGGCCCA+AGG	0.572152	3_2:+74541369	None:intergenic
GTGATAATCAAACACTAGAG+TGG	0.576916	3_2:+74540233	None:intergenic
ACCAATGCGTTGTGCGACAG+AGG	0.580949	3_2:+74540531	None:intergenic
GGCACTTGATGCATGATGGA+CGG	0.581675	3_2:-74540579	Msa0424340:CDS
AGAAATTGTCGAAGAGGTGT+GGG	0.586050	3_2:+74540554	None:intergenic
CTTGAGGGTTTGACGAGCGG+AGG	0.589012	3_2:-74540442	Msa0424340:CDS
GGCTTGTACCCAAGATTAGG+AGG	0.601689	3_2:-74540393	Msa0424340:CDS
TCCTCTAGCCAAACCCGTGG+AGG	0.604238	3_2:-74541610	Msa0424340:CDS
GGGGTCTTTAGGTGGCATTG+TGG	0.610837	3_2:+74541723	None:intergenic
GTGGCAACATAACGATGCCT+GGG	0.611447	3_2:-74540600	Msa0424340:CDS
ATGGGGTTGGAGACGAGACT+GGG	0.612251	3_2:-74541404	Msa0424340:CDS
CAGAGGAGAAATTGTCGAAG+AGG	0.612826	3_2:+74540548	None:intergenic
GGTGGAGTCCATGCATGCGT+TGG	0.613699	3_2:+74541744	None:intergenic
GCGATGTGCACCCAATTAGG+AGG	0.617339	3_2:-74541768	Msa0424340:CDS
ATTGTACAAACTAGAGAACC+AGG	0.619587	3_2:+74541834	None:intergenic
ATAAACACGACTGATGGGGT+TGG	0.622469	3_2:-74541417	Msa0424340:CDS
TGGAGTTCTTGATTGGATGG+TGG	0.626352	3_2:-74540477	Msa0424340:CDS
GACTATCCAATACTTGATTG+GGG	0.638960	3_2:-74541259	Msa0424340:CDS
AGAGTGTGTGTATAATAATG+TGG	0.639605	3_2:-74540131	Msa0424340:three_prime_UTR
TCCTCTCGTATGCAATCTCG+TGG	0.640816	3_2:+74540686	None:intergenic
ATGGATAAACACGACTGATG+GGG	0.653624	3_2:-74541421	Msa0424340:CDS
TAATGTGGTTAAATAACTAG+AGG	0.655098	3_2:-74540116	Msa0424340:three_prime_UTR
GACACGCTCTTGGACTGCCG+AGG	0.664966	3_2:-74541355	Msa0424340:CDS
TGGCTAGCATTGTCTCTGTG+GGG	0.673942	3_2:+74540638	None:intergenic
GAATCTGGCAATAAATCATG+TGG	0.674924	3_2:+74541576	None:intergenic
GCCACGAGATTGCATACGAG+AGG	0.675137	3_2:-74540687	Msa0424340:CDS
TGATCGATGAACTCATCAGA+CGG	0.689235	3_2:+74541546	None:intergenic
ACTGCCGAGGAAAATAGGCA+TGG	0.693775	3_2:-74541342	Msa0424340:CDS
GCTTCCTCTAGCCAAACCCG+TGG	0.697415	3_2:-74541613	Msa0424340:CDS
CATGCACAAGAACTTGTGTG+TGG	0.700416	3_2:-74540415	Msa0424340:CDS
ATGCACAAGAACTTGTGTGT+GGG	0.700998	3_2:-74540414	Msa0424340:CDS
GATAATCAAACACTAGAGTG+GGG	0.708522	3_2:+74540235	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GCATTCATTTTAAAAACAAA+AGG	+	chr3_2:74540759-74540778	None:intergenic	20.0%
!!	TAAAATTAATTGAGTGTTTG+TGG	-	chr3_2:74541065-74541084	Msa0424340:intron	20.0%
!!!	GCATTCATTTTAAAAACAAA+AGG	+	chr3_2:74540759-74540778	None:intergenic	20.0%
!!	TAAAATTAATTGAGTGTTTG+TGG	-	chr3_2:74541065-74541084	Msa0424340:intron	20.0%
!!!	TTGTACAATGTTTTTTCTCT+AGG	-	chr3_2:74540120-74540139	Msa0424340:three_prime_UTR	25.0%
!	AGAATATCAAACAATGATGA+TGG	-	chr3_2:74540150-74540169	Msa0424340:three_prime_UTR	25.0%
!!	TTGAAGATTTCTTTCTTTTC+CGG	+	chr3_2:74540277-74540296	None:intergenic	25.0%
!!	TTTTGTATCACACAGTAATA+TGG	-	chr3_2:74541158-74541177	Msa0424340:intron	25.0%
!	TAATGTGGTTAAATAACTAG+AGG	-	chr3_2:74541824-74541843	Msa0424340:five_prime_UTR	25.0%
!!!	TTGTACAATGTTTTTTCTCT+AGG	-	chr3_2:74540120-74540139	Msa0424340:three_prime_UTR	25.0%
!	AGAATATCAAACAATGATGA+TGG	-	chr3_2:74540150-74540169	Msa0424340:three_prime_UTR	25.0%
!!	TTGAAGATTTCTTTCTTTTC+CGG	+	chr3_2:74540277-74540296	None:intergenic	25.0%
!!	TTTTGTATCACACAGTAATA+TGG	-	chr3_2:74541158-74541177	Msa0424340:intron	25.0%
!	TAATGTGGTTAAATAACTAG+AGG	-	chr3_2:74541824-74541843	Msa0424340:five_prime_UTR	25.0%
	TCTTCAAGTCATTAGAGAAT+TGG	-	chr3_2:74540290-74540309	Msa0424340:three_prime_UTR	30.0%
	CTTCAAGTCATTAGAGAATT+GGG	-	chr3_2:74540291-74540310	Msa0424340:three_prime_UTR	30.0%
	TTTATCCATGATTGGTACAT+AGG	+	chr3_2:74540508-74540527	None:intergenic	30.0%
	AAGACTATCCAATACTTGAT+TGG	-	chr3_2:74540679-74540698	Msa0424340:CDS	30.0%
	AGACTATCCAATACTTGATT+GGG	-	chr3_2:74540680-74540699	Msa0424340:CDS	30.0%
	TTATGAATCGTTAGATCTTG+TGG	-	chr3_2:74540829-74540848	Msa0424340:CDS	30.0%
	TATGAATCGTTAGATCTTGT+GGG	-	chr3_2:74540830-74540849	Msa0424340:CDS	30.0%
	CATAAACAACTCCCATATAT+GGG	+	chr3_2:74541116-74541135	None:intergenic	30.0%
	ATTACTGTGTGATACAAAAG+TGG	+	chr3_2:74541157-74541176	None:intergenic	30.0%
	TGAAAGATCCAACTAAACTT+GGG	+	chr3_2:74541612-74541631	None:intergenic	30.0%
	TTGAAAGATCCAACTAAACT+TGG	+	chr3_2:74541613-74541632	None:intergenic	30.0%
	TGTGTACTTTCATACTCATA+AGG	+	chr3_2:74541646-74541665	None:intergenic	30.0%
	TGATAATCAAACACTAGAGT+GGG	+	chr3_2:74541709-74541728	None:intergenic	30.0%
	AGAGTGTGTGTATAATAATG+TGG	-	chr3_2:74541809-74541828	Msa0424340:five_prime_UTR	30.0%
	TCTTCAAGTCATTAGAGAAT+TGG	-	chr3_2:74540290-74540309	Msa0424340:three_prime_UTR	30.0%
	CTTCAAGTCATTAGAGAATT+GGG	-	chr3_2:74540291-74540310	Msa0424340:three_prime_UTR	30.0%
	TTTATCCATGATTGGTACAT+AGG	+	chr3_2:74540508-74540527	None:intergenic	30.0%
	AAGACTATCCAATACTTGAT+TGG	-	chr3_2:74540679-74540698	Msa0424340:CDS	30.0%
	AGACTATCCAATACTTGATT+GGG	-	chr3_2:74540680-74540699	Msa0424340:CDS	30.0%
	TTATGAATCGTTAGATCTTG+TGG	-	chr3_2:74540829-74540848	Msa0424340:CDS	30.0%
	TATGAATCGTTAGATCTTGT+GGG	-	chr3_2:74540830-74540849	Msa0424340:CDS	30.0%
	CATAAACAACTCCCATATAT+GGG	+	chr3_2:74541116-74541135	None:intergenic	30.0%
	ATTACTGTGTGATACAAAAG+TGG	+	chr3_2:74541157-74541176	None:intergenic	30.0%
	TGAAAGATCCAACTAAACTT+GGG	+	chr3_2:74541612-74541631	None:intergenic	30.0%
	TTGAAAGATCCAACTAAACT+TGG	+	chr3_2:74541613-74541632	None:intergenic	30.0%
	TGTGTACTTTCATACTCATA+AGG	+	chr3_2:74541646-74541665	None:intergenic	30.0%
	TGATAATCAAACACTAGAGT+GGG	+	chr3_2:74541709-74541728	None:intergenic	30.0%
	AGAGTGTGTGTATAATAATG+TGG	-	chr3_2:74541809-74541828	Msa0424340:five_prime_UTR	30.0%
	ATTGTACAAACTAGAGAACC+AGG	+	chr3_2:74540109-74540128	None:intergenic	35.0%
!!!	TCTTTTGGACTTTTTGGGAT+GGG	+	chr3_2:74540240-74540259	None:intergenic	35.0%
!	GTGTGTCTTTTGGACTTTTT+GGG	+	chr3_2:74540245-74540264	None:intergenic	35.0%
!	AGTGTGTCTTTTGGACTTTT+TGG	+	chr3_2:74540246-74540265	None:intergenic	35.0%
	GAATCTGGCAATAAATCATG+TGG	+	chr3_2:74540367-74540386	None:intergenic	35.0%
	AAAACTACGAGATAATCGTC+TGG	+	chr3_2:74540454-74540473	None:intergenic	35.0%
!	AGACGATTATCTCGTAGTTT+TGG	-	chr3_2:74540453-74540472	Msa0424340:CDS	35.0%
!!!	GATTATCTCGTAGTTTTGGT+GGG	-	chr3_2:74540457-74540476	Msa0424340:CDS	35.0%
	CAGAACTTATCTCTATCTCT+CGG	-	chr3_2:74540630-74540649	Msa0424340:CDS	35.0%
	AGAACTTATCTCTATCTCTC+GGG	-	chr3_2:74540631-74540650	Msa0424340:CDS	35.0%
	GACTATCCAATACTTGATTG+GGG	-	chr3_2:74540681-74540700	Msa0424340:CDS	35.0%
	GCATCATGTAACTGCTATAA+AGG	+	chr3_2:74540801-74540820	None:intergenic	35.0%
	TAATTGAGTGTTTGTGGTGT+AGG	-	chr3_2:74541071-74541090	Msa0424340:intron	35.0%
	AACCGAAAACAACCCATATA+TGG	-	chr3_2:74541101-74541120	Msa0424340:intron	35.0%
	ACCGAAAACAACCCATATAT+GGG	-	chr3_2:74541102-74541121	Msa0424340:intron	35.0%
!!	TCCCATATATGGGTTGTTTT+CGG	+	chr3_2:74541106-74541125	None:intergenic	35.0%
	GCATAAACAACTCCCATATA+TGG	+	chr3_2:74541117-74541136	None:intergenic	35.0%
	GCCATAGCAAAAATAATGAG+TGG	-	chr3_2:74541321-74541340	Msa0424340:CDS	35.0%
!!!	GCCACTCATTATTTTTGCTA+TGG	+	chr3_2:74541325-74541344	None:intergenic	35.0%
	AGATGAAACCCAAGTTTAGT+TGG	-	chr3_2:74541601-74541620	Msa0424340:CDS	35.0%
	GATAATCAAACACTAGAGTG+GGG	+	chr3_2:74541708-74541727	None:intergenic	35.0%
	GTGATAATCAAACACTAGAG+TGG	+	chr3_2:74541710-74541729	None:intergenic	35.0%
	ATAACTAGAGGACAAGTAGT+TGG	-	chr3_2:74541836-74541855	Msa0424340:five_prime_UTR	35.0%
	ATTGTACAAACTAGAGAACC+AGG	+	chr3_2:74540109-74540128	None:intergenic	35.0%
!!!	TCTTTTGGACTTTTTGGGAT+GGG	+	chr3_2:74540240-74540259	None:intergenic	35.0%
!	GTGTGTCTTTTGGACTTTTT+GGG	+	chr3_2:74540245-74540264	None:intergenic	35.0%
!	AGTGTGTCTTTTGGACTTTT+TGG	+	chr3_2:74540246-74540265	None:intergenic	35.0%
	GAATCTGGCAATAAATCATG+TGG	+	chr3_2:74540367-74540386	None:intergenic	35.0%
	AAAACTACGAGATAATCGTC+TGG	+	chr3_2:74540454-74540473	None:intergenic	35.0%
!	AGACGATTATCTCGTAGTTT+TGG	-	chr3_2:74540453-74540472	Msa0424340:CDS	35.0%
!!!	GATTATCTCGTAGTTTTGGT+GGG	-	chr3_2:74540457-74540476	Msa0424340:CDS	35.0%
	CAGAACTTATCTCTATCTCT+CGG	-	chr3_2:74540630-74540649	Msa0424340:CDS	35.0%
	AGAACTTATCTCTATCTCTC+GGG	-	chr3_2:74540631-74540650	Msa0424340:CDS	35.0%
	GACTATCCAATACTTGATTG+GGG	-	chr3_2:74540681-74540700	Msa0424340:CDS	35.0%
	GCATCATGTAACTGCTATAA+AGG	+	chr3_2:74540801-74540820	None:intergenic	35.0%
	TAATTGAGTGTTTGTGGTGT+AGG	-	chr3_2:74541071-74541090	Msa0424340:intron	35.0%
	AACCGAAAACAACCCATATA+TGG	-	chr3_2:74541101-74541120	Msa0424340:intron	35.0%
	ACCGAAAACAACCCATATAT+GGG	-	chr3_2:74541102-74541121	Msa0424340:intron	35.0%
!!	TCCCATATATGGGTTGTTTT+CGG	+	chr3_2:74541106-74541125	None:intergenic	35.0%
	GCATAAACAACTCCCATATA+TGG	+	chr3_2:74541117-74541136	None:intergenic	35.0%
	GCCATAGCAAAAATAATGAG+TGG	-	chr3_2:74541321-74541340	Msa0424340:CDS	35.0%
!!!	GCCACTCATTATTTTTGCTA+TGG	+	chr3_2:74541325-74541344	None:intergenic	35.0%
	AGATGAAACCCAAGTTTAGT+TGG	-	chr3_2:74541601-74541620	Msa0424340:CDS	35.0%
	GATAATCAAACACTAGAGTG+GGG	+	chr3_2:74541708-74541727	None:intergenic	35.0%
	GTGATAATCAAACACTAGAG+TGG	+	chr3_2:74541710-74541729	None:intergenic	35.0%
!!!	CTTTTGGACTTTTTGGGATG+GGG	+	chr3_2:74540239-74540258	None:intergenic	40.0%
!!	GTCTTTTGGACTTTTTGGGA+TGG	+	chr3_2:74540241-74540260	None:intergenic	40.0%
	TGATCGATGAACTCATCAGA+CGG	+	chr3_2:74540397-74540416	None:intergenic	40.0%
!!!	CGATTATCTCGTAGTTTTGG+TGG	-	chr3_2:74540456-74540475	Msa0424340:CDS	40.0%
	CATTGCCTATGTACCAATCA+TGG	-	chr3_2:74540500-74540519	Msa0424340:CDS	40.0%
	CAGTCGTGTTTATCCATGAT+TGG	+	chr3_2:74540516-74540535	None:intergenic	40.0%
	TCATGGATAAACACGACTGA+TGG	-	chr3_2:74540517-74540536	Msa0424340:CDS	40.0%
	CATGGATAAACACGACTGAT+GGG	-	chr3_2:74540518-74540537	Msa0424340:CDS	40.0%
	ATGGATAAACACGACTGATG+GGG	-	chr3_2:74540519-74540538	Msa0424340:CDS	40.0%
	GAATGCGTATAACACATGCT+TGG	-	chr3_2:74540773-74540792	Msa0424340:CDS	40.0%
	TTGCACCATGAAACTGTTGT+AGG	-	chr3_2:74540893-74540912	Msa0424340:intron	40.0%
	TGCACCATGAAACTGTTGTA+GGG	-	chr3_2:74540894-74540913	Msa0424340:intron	40.0%
	AAGTCCCTACAACAGTTTCA+TGG	+	chr3_2:74540901-74540920	None:intergenic	40.0%
	GTGTTTGTGGTGTAGGATAT+AGG	-	chr3_2:74541078-74541097	Msa0424340:intron	40.0%
	AAAAGTGGCTCTCTCTTGAA+AGG	+	chr3_2:74541142-74541161	None:intergenic	40.0%
!	CACTGAGAAACTTCTAGAAG+TGG	-	chr3_2:74541278-74541297	Msa0424340:CDS	40.0%
!	AGAAATTGTCGAAGAGGTGT+GGG	+	chr3_2:74541389-74541408	None:intergenic	40.0%
	TAGTGACTACATCGATAGCT+TGG	-	chr3_2:74541443-74541462	Msa0424340:CDS	40.0%
	GATAGCTTGGAGTTCTTGAT+TGG	-	chr3_2:74541456-74541475	Msa0424340:CDS	40.0%
	ATGCACAAGAACTTGTGTGT+GGG	-	chr3_2:74541526-74541545	Msa0424340:CDS	40.0%
	TCTTGTAGCCTCCTAATCTT+GGG	+	chr3_2:74541558-74541577	None:intergenic	40.0%
	TTCTTGTAGCCTCCTAATCT+TGG	+	chr3_2:74541559-74541578	None:intergenic	40.0%
!!!	CTTTTGGACTTTTTGGGATG+GGG	+	chr3_2:74540239-74540258	None:intergenic	40.0%
!!	GTCTTTTGGACTTTTTGGGA+TGG	+	chr3_2:74540241-74540260	None:intergenic	40.0%
	TGATCGATGAACTCATCAGA+CGG	+	chr3_2:74540397-74540416	None:intergenic	40.0%
!!!	CGATTATCTCGTAGTTTTGG+TGG	-	chr3_2:74540456-74540475	Msa0424340:CDS	40.0%
	CATTGCCTATGTACCAATCA+TGG	-	chr3_2:74540500-74540519	Msa0424340:CDS	40.0%
	CAGTCGTGTTTATCCATGAT+TGG	+	chr3_2:74540516-74540535	None:intergenic	40.0%
	TCATGGATAAACACGACTGA+TGG	-	chr3_2:74540517-74540536	Msa0424340:CDS	40.0%
	CATGGATAAACACGACTGAT+GGG	-	chr3_2:74540518-74540537	Msa0424340:CDS	40.0%
	ATGGATAAACACGACTGATG+GGG	-	chr3_2:74540519-74540538	Msa0424340:CDS	40.0%
	GAATGCGTATAACACATGCT+TGG	-	chr3_2:74540773-74540792	Msa0424340:CDS	40.0%
	TTGCACCATGAAACTGTTGT+AGG	-	chr3_2:74540893-74540912	Msa0424340:intron	40.0%
	TGCACCATGAAACTGTTGTA+GGG	-	chr3_2:74540894-74540913	Msa0424340:intron	40.0%
	AAGTCCCTACAACAGTTTCA+TGG	+	chr3_2:74540901-74540920	None:intergenic	40.0%
	GTGTTTGTGGTGTAGGATAT+AGG	-	chr3_2:74541078-74541097	Msa0424340:intron	40.0%
	AAAAGTGGCTCTCTCTTGAA+AGG	+	chr3_2:74541142-74541161	None:intergenic	40.0%
!	CACTGAGAAACTTCTAGAAG+TGG	-	chr3_2:74541278-74541297	Msa0424340:CDS	40.0%
!	AGAAATTGTCGAAGAGGTGT+GGG	+	chr3_2:74541389-74541408	None:intergenic	40.0%
	TAGTGACTACATCGATAGCT+TGG	-	chr3_2:74541443-74541462	Msa0424340:CDS	40.0%
	GATAGCTTGGAGTTCTTGAT+TGG	-	chr3_2:74541456-74541475	Msa0424340:CDS	40.0%
	ATGCACAAGAACTTGTGTGT+GGG	-	chr3_2:74541526-74541545	Msa0424340:CDS	40.0%
	TCTTGTAGCCTCCTAATCTT+GGG	+	chr3_2:74541558-74541577	None:intergenic	40.0%
	TTCTTGTAGCCTCCTAATCT+TGG	+	chr3_2:74541559-74541578	None:intergenic	40.0%
!	ATGCGTTGGTCCTCCTAATT+GGG	+	chr3_2:74540185-74540204	None:intergenic	45.0%
!!!	CTTTTTGGGATGGGGTCTTT+AGG	+	chr3_2:74540231-74540250	None:intergenic	45.0%
!	GAGACATCGAGTGTGTCTTT+TGG	+	chr3_2:74540255-74540274	None:intergenic	45.0%
	AAAGACACACTCGATGTCTC+CGG	-	chr3_2:74540255-74540274	Msa0424340:three_prime_UTR	45.0%
	TCAGACGGTAGTGATGAATC+TGG	+	chr3_2:74540382-74540401	None:intergenic	45.0%
	ATAAACACGACTGATGGGGT+TGG	-	chr3_2:74540523-74540542	Msa0424340:CDS	45.0%
!	ATCGCCATGCCTATTTTCCT+CGG	+	chr3_2:74540605-74540624	None:intergenic	45.0%
	CTTATCTCTATCTCTCGGGT+CGG	-	chr3_2:74540635-74540654	Msa0424340:CDS	45.0%
	TTATCTCTATCTCTCGGGTC+GGG	-	chr3_2:74540636-74540655	Msa0424340:CDS	45.0%
	ATCCAATACTTGATTGGGGC+TGG	-	chr3_2:74540685-74540704	Msa0424340:CDS	45.0%
	ACACAGTAATATGGCTCGTC+TGG	-	chr3_2:74541167-74541186	Msa0424340:intron	45.0%
	TAATATGGCTCGTCTGGCTA+AGG	-	chr3_2:74541173-74541192	Msa0424340:intron	45.0%
	ATGGCTAGCATTGTCTCTGT+GGG	+	chr3_2:74541306-74541325	None:intergenic	45.0%
	TATGGCTAGCATTGTCTCTG+TGG	+	chr3_2:74541307-74541326	None:intergenic	45.0%
	GAGAAATTGTCGAAGAGGTG+TGG	+	chr3_2:74541390-74541409	None:intergenic	45.0%
	CAGAGGAGAAATTGTCGAAG+AGG	+	chr3_2:74541395-74541414	None:intergenic	45.0%
!	ACAACGCATTGGTGTGTACA+AGG	-	chr3_2:74541419-74541438	Msa0424340:CDS	45.0%
	GCTTGGAGTTCTTGATTGGA+TGG	-	chr3_2:74541460-74541479	Msa0424340:CDS	45.0%
	TGGAGTTCTTGATTGGATGG+TGG	-	chr3_2:74541463-74541482	Msa0424340:CDS	45.0%
!!	CTTGATTGGATGGTGGAGAT+TGG	-	chr3_2:74541470-74541489	Msa0424340:CDS	45.0%
	TGGAGATTGGAGAAGCTTGA+GGG	-	chr3_2:74541483-74541502	Msa0424340:CDS	45.0%
	CATGCACAAGAACTTGTGTG+TGG	-	chr3_2:74541525-74541544	Msa0424340:CDS	45.0%
!	ATGCGTTGGTCCTCCTAATT+GGG	+	chr3_2:74540185-74540204	None:intergenic	45.0%
!!!	CTTTTTGGGATGGGGTCTTT+AGG	+	chr3_2:74540231-74540250	None:intergenic	45.0%
!	GAGACATCGAGTGTGTCTTT+TGG	+	chr3_2:74540255-74540274	None:intergenic	45.0%
	AAAGACACACTCGATGTCTC+CGG	-	chr3_2:74540255-74540274	Msa0424340:three_prime_UTR	45.0%
	TCAGACGGTAGTGATGAATC+TGG	+	chr3_2:74540382-74540401	None:intergenic	45.0%
	ATAAACACGACTGATGGGGT+TGG	-	chr3_2:74540523-74540542	Msa0424340:CDS	45.0%
!	ATCGCCATGCCTATTTTCCT+CGG	+	chr3_2:74540605-74540624	None:intergenic	45.0%
	CTTATCTCTATCTCTCGGGT+CGG	-	chr3_2:74540635-74540654	Msa0424340:CDS	45.0%
	TTATCTCTATCTCTCGGGTC+GGG	-	chr3_2:74540636-74540655	Msa0424340:CDS	45.0%
	ATCCAATACTTGATTGGGGC+TGG	-	chr3_2:74540685-74540704	Msa0424340:CDS	45.0%
	ACACAGTAATATGGCTCGTC+TGG	-	chr3_2:74541167-74541186	Msa0424340:intron	45.0%
	TAATATGGCTCGTCTGGCTA+AGG	-	chr3_2:74541173-74541192	Msa0424340:intron	45.0%
	ATGGCTAGCATTGTCTCTGT+GGG	+	chr3_2:74541306-74541325	None:intergenic	45.0%
	TATGGCTAGCATTGTCTCTG+TGG	+	chr3_2:74541307-74541326	None:intergenic	45.0%
	GAGAAATTGTCGAAGAGGTG+TGG	+	chr3_2:74541390-74541409	None:intergenic	45.0%
	CAGAGGAGAAATTGTCGAAG+AGG	+	chr3_2:74541395-74541414	None:intergenic	45.0%
!	ACAACGCATTGGTGTGTACA+AGG	-	chr3_2:74541419-74541438	Msa0424340:CDS	45.0%
	GCTTGGAGTTCTTGATTGGA+TGG	-	chr3_2:74541460-74541479	Msa0424340:CDS	45.0%
	TGGAGTTCTTGATTGGATGG+TGG	-	chr3_2:74541463-74541482	Msa0424340:CDS	45.0%
!!	CTTGATTGGATGGTGGAGAT+TGG	-	chr3_2:74541470-74541489	Msa0424340:CDS	45.0%
	TGGAGATTGGAGAAGCTTGA+GGG	-	chr3_2:74541483-74541502	Msa0424340:CDS	45.0%
	CATGCACAAGAACTTGTGTG+TGG	-	chr3_2:74541525-74541544	Msa0424340:CDS	45.0%
	ATGGCGATGTGCACCCAATT+AGG	-	chr3_2:74540169-74540188	Msa0424340:three_prime_UTR	50.0%
!	CATGCGTTGGTCCTCCTAAT+TGG	+	chr3_2:74540186-74540205	None:intergenic	50.0%
	GTCTTTAGGTGGCATTGTGG+TGG	+	chr3_2:74540217-74540236	None:intergenic	50.0%
!	TTTGGGATGGGGTCTTTAGG+TGG	+	chr3_2:74540228-74540247	None:intergenic	50.0%
	TGGGTCAAGCACCAATCCTT+GGG	-	chr3_2:74540555-74540574	Msa0424340:CDS	50.0%
!	AGTCCAAGAGCGTGTCCATA+CGG	+	chr3_2:74540581-74540600	None:intergenic	50.0%
	CTTGGACTGCCGAGGAAAAT+AGG	-	chr3_2:74540593-74540612	Msa0424340:CDS	50.0%
	ACTGCCGAGGAAAATAGGCA+TGG	-	chr3_2:74540598-74540617	Msa0424340:CDS	50.0%
	TGCCAGCCCCAATCAAGTAT+TGG	+	chr3_2:74540690-74540709	None:intergenic	50.0%
!	ATACTTGATTGGGGCTGGCA+TGG	-	chr3_2:74540690-74540709	Msa0424340:CDS	50.0%
!	CTCGTGGCGTTTTTCATCTG+CGG	+	chr3_2:74541241-74541260	None:intergenic	50.0%
	TCCTCTCGTATGCAATCTCG+TGG	+	chr3_2:74541257-74541276	None:intergenic	50.0%
	TGGCTAGCATTGTCTCTGTG+GGG	+	chr3_2:74541305-74541324	None:intergenic	50.0%
	AGTGGCAACATAACGATGCC+TGG	-	chr3_2:74541339-74541358	Msa0424340:CDS	50.0%
	GTGGCAACATAACGATGCCT+GGG	-	chr3_2:74541340-74541359	Msa0424340:CDS	50.0%
!	GGCACTTGATGCATGATGGA+CGG	-	chr3_2:74541361-74541380	Msa0424340:CDS	50.0%
!!	GCACTTGATGCATGATGGAC+GGG	-	chr3_2:74541362-74541381	Msa0424340:CDS	50.0%
	GTGGAGATTGGAGAAGCTTG+AGG	-	chr3_2:74541482-74541501	Msa0424340:CDS	50.0%
	AAGCTTGAGGGTTTGACGAG+CGG	-	chr3_2:74541495-74541514	Msa0424340:CDS	50.0%
	GTGGGCTTGTACCCAAGATT+AGG	-	chr3_2:74541544-74541563	Msa0424340:CDS	50.0%
	GGCTTGTACCCAAGATTAGG+AGG	-	chr3_2:74541547-74541566	Msa0424340:CDS	50.0%
	ATGGCGATGTGCACCCAATT+AGG	-	chr3_2:74540169-74540188	Msa0424340:three_prime_UTR	50.0%
!	CATGCGTTGGTCCTCCTAAT+TGG	+	chr3_2:74540186-74540205	None:intergenic	50.0%
	GTCTTTAGGTGGCATTGTGG+TGG	+	chr3_2:74540217-74540236	None:intergenic	50.0%
!	TTTGGGATGGGGTCTTTAGG+TGG	+	chr3_2:74540228-74540247	None:intergenic	50.0%
	TGGGTCAAGCACCAATCCTT+GGG	-	chr3_2:74540555-74540574	Msa0424340:CDS	50.0%
!	AGTCCAAGAGCGTGTCCATA+CGG	+	chr3_2:74540581-74540600	None:intergenic	50.0%
	CTTGGACTGCCGAGGAAAAT+AGG	-	chr3_2:74540593-74540612	Msa0424340:CDS	50.0%
	ACTGCCGAGGAAAATAGGCA+TGG	-	chr3_2:74540598-74540617	Msa0424340:CDS	50.0%
	TGCCAGCCCCAATCAAGTAT+TGG	+	chr3_2:74540690-74540709	None:intergenic	50.0%
!	ATACTTGATTGGGGCTGGCA+TGG	-	chr3_2:74540690-74540709	Msa0424340:CDS	50.0%
!	CTCGTGGCGTTTTTCATCTG+CGG	+	chr3_2:74541241-74541260	None:intergenic	50.0%
	TCCTCTCGTATGCAATCTCG+TGG	+	chr3_2:74541257-74541276	None:intergenic	50.0%
	TGGCTAGCATTGTCTCTGTG+GGG	+	chr3_2:74541305-74541324	None:intergenic	50.0%
	AGTGGCAACATAACGATGCC+TGG	-	chr3_2:74541339-74541358	Msa0424340:CDS	50.0%
	GTGGCAACATAACGATGCCT+GGG	-	chr3_2:74541340-74541359	Msa0424340:CDS	50.0%
!	GGCACTTGATGCATGATGGA+CGG	-	chr3_2:74541361-74541380	Msa0424340:CDS	50.0%
!!	GCACTTGATGCATGATGGAC+GGG	-	chr3_2:74541362-74541381	Msa0424340:CDS	50.0%
	GTGGAGATTGGAGAAGCTTG+AGG	-	chr3_2:74541482-74541501	Msa0424340:CDS	50.0%
	AAGCTTGAGGGTTTGACGAG+CGG	-	chr3_2:74541495-74541514	Msa0424340:CDS	50.0%
	GTGGGCTTGTACCCAAGATT+AGG	-	chr3_2:74541544-74541563	Msa0424340:CDS	50.0%
	GGCTTGTACCCAAGATTAGG+AGG	-	chr3_2:74541547-74541566	Msa0424340:CDS	50.0%
	GCGATGTGCACCCAATTAGG+AGG	-	chr3_2:74540172-74540191	Msa0424340:three_prime_UTR	55.0%
	TAGGAGGACCAACGCATGCA+TGG	-	chr3_2:74540188-74540207	Msa0424340:three_prime_UTR	55.0%
	GGGGTCTTTAGGTGGCATTG+TGG	+	chr3_2:74540220-74540239	None:intergenic	55.0%
	ATGGGGTTGGAGACGAGACT+GGG	-	chr3_2:74540536-74540555	Msa0424340:CDS	55.0%
	CTGGGTCAAGCACCAATCCT+TGG	-	chr3_2:74540554-74540573	Msa0424340:CDS	55.0%
	TGTCCATACGGCCCAAGGAT+TGG	+	chr3_2:74540569-74540588	None:intergenic	55.0%
	CCACATATGCGTGCAAGCAC+TGG	+	chr3_2:74541210-74541229	None:intergenic	55.0%
	CCAGTGCTTGCACGCATATG+TGG	-	chr3_2:74541207-74541226	Msa0424340:intron	55.0%
	GCCACGAGATTGCATACGAG+AGG	-	chr3_2:74541253-74541272	Msa0424340:CDS	55.0%
	CCATCATGCATCAAGTGCCC+AGG	+	chr3_2:74541360-74541379	None:intergenic	55.0%
	CCTGGGCACTTGATGCATGA+TGG	-	chr3_2:74541357-74541376	Msa0424340:CDS	55.0%
	TCCTCTGTCGCACAACGCAT+TGG	-	chr3_2:74541408-74541427	Msa0424340:CDS	55.0%
	ACCAATGCGTTGTGCGACAG+AGG	+	chr3_2:74541412-74541431	None:intergenic	55.0%
	GCGATGTGCACCCAATTAGG+AGG	-	chr3_2:74540172-74540191	Msa0424340:three_prime_UTR	55.0%
	TAGGAGGACCAACGCATGCA+TGG	-	chr3_2:74540188-74540207	Msa0424340:three_prime_UTR	55.0%
	GGGGTCTTTAGGTGGCATTG+TGG	+	chr3_2:74540220-74540239	None:intergenic	55.0%
	ATGGGGTTGGAGACGAGACT+GGG	-	chr3_2:74540536-74540555	Msa0424340:CDS	55.0%
	CTGGGTCAAGCACCAATCCT+TGG	-	chr3_2:74540554-74540573	Msa0424340:CDS	55.0%
	TGTCCATACGGCCCAAGGAT+TGG	+	chr3_2:74540569-74540588	None:intergenic	55.0%
	CCACATATGCGTGCAAGCAC+TGG	+	chr3_2:74541210-74541229	None:intergenic	55.0%
	CCAGTGCTTGCACGCATATG+TGG	-	chr3_2:74541207-74541226	Msa0424340:intron	55.0%
	GCCACGAGATTGCATACGAG+AGG	-	chr3_2:74541253-74541272	Msa0424340:CDS	55.0%
	CCATCATGCATCAAGTGCCC+AGG	+	chr3_2:74541360-74541379	None:intergenic	55.0%
	CCTGGGCACTTGATGCATGA+TGG	-	chr3_2:74541357-74541376	Msa0424340:CDS	55.0%
	TCCTCTGTCGCACAACGCAT+TGG	-	chr3_2:74541408-74541427	Msa0424340:CDS	55.0%
	ACCAATGCGTTGTGCGACAG+AGG	+	chr3_2:74541412-74541431	None:intergenic	55.0%
	GGTGGAGTCCATGCATGCGT+TGG	+	chr3_2:74540199-74540218	None:intergenic	60.0%
	GCTTCCTCTAGCCAAACCCG+TGG	-	chr3_2:74540327-74540346	Msa0424340:CDS	60.0%
	TCCTCTAGCCAAACCCGTGG+AGG	-	chr3_2:74540330-74540349	Msa0424340:CDS	60.0%
	TCCTCCACGGGTTTGGCTAG+AGG	+	chr3_2:74540334-74540353	None:intergenic	60.0%
	CCAGCATTCCTCCACGGGTT+TGG	+	chr3_2:74540341-74540360	None:intergenic	60.0%
	CCAAACCCGTGGAGGAATGC+TGG	-	chr3_2:74540338-74540357	Msa0424340:CDS	60.0%
	TGGCTGCCAGCATTCCTCCA+CGG	+	chr3_2:74540347-74540366	None:intergenic	60.0%
	GATGGGGTTGGAGACGAGAC+TGG	-	chr3_2:74540535-74540554	Msa0424340:CDS	60.0%
	GCACCAATCCTTGGGCCGTA+TGG	-	chr3_2:74540563-74540582	Msa0424340:CDS	60.0%
	GGCTCGTCTGGCTAAGGAGA+CGG	-	chr3_2:74541179-74541198	Msa0424340:intron	60.0%
	GCTCGTCTGGCTAAGGAGAC+GGG	-	chr3_2:74541180-74541199	Msa0424340:intron	60.0%
	CTTGAGGGTTTGACGAGCGG+AGG	-	chr3_2:74541498-74541517	Msa0424340:CDS	60.0%
	GGTGGAGTCCATGCATGCGT+TGG	+	chr3_2:74540199-74540218	None:intergenic	60.0%
	GCTTCCTCTAGCCAAACCCG+TGG	-	chr3_2:74540327-74540346	Msa0424340:CDS	60.0%
	TCCTCTAGCCAAACCCGTGG+AGG	-	chr3_2:74540330-74540349	Msa0424340:CDS	60.0%
	TCCTCCACGGGTTTGGCTAG+AGG	+	chr3_2:74540334-74540353	None:intergenic	60.0%
	CCAGCATTCCTCCACGGGTT+TGG	+	chr3_2:74540341-74540360	None:intergenic	60.0%
	CCAAACCCGTGGAGGAATGC+TGG	-	chr3_2:74540338-74540357	Msa0424340:CDS	60.0%
	TGGCTGCCAGCATTCCTCCA+CGG	+	chr3_2:74540347-74540366	None:intergenic	60.0%
	GATGGGGTTGGAGACGAGAC+TGG	-	chr3_2:74540535-74540554	Msa0424340:CDS	60.0%
	GCACCAATCCTTGGGCCGTA+TGG	-	chr3_2:74540563-74540582	Msa0424340:CDS	60.0%
	GGCTCGTCTGGCTAAGGAGA+CGG	-	chr3_2:74541179-74541198	Msa0424340:intron	60.0%
	GCTCGTCTGGCTAAGGAGAC+GGG	-	chr3_2:74541180-74541199	Msa0424340:intron	60.0%
	CTTGAGGGTTTGACGAGCGG+AGG	-	chr3_2:74541498-74541517	Msa0424340:CDS	60.0%
	GGCTGCCAGCATTCCTCCAC+GGG	+	chr3_2:74540346-74540365	None:intergenic	65.0%
	GAGCGTGTCCATACGGCCCA+AGG	+	chr3_2:74540574-74540593	None:intergenic	65.0%
	GGGCCGTATGGACACGCTCT+TGG	-	chr3_2:74540575-74540594	Msa0424340:CDS	65.0%
	GACACGCTCTTGGACTGCCG+AGG	-	chr3_2:74540585-74540604	Msa0424340:CDS	65.0%
	GGCTGCCAGCATTCCTCCAC+GGG	+	chr3_2:74540346-74540365	None:intergenic	65.0%
	GAGCGTGTCCATACGGCCCA+AGG	+	chr3_2:74540574-74540593	None:intergenic	65.0%
	GGGCCGTATGGACACGCTCT+TGG	-	chr3_2:74540575-74540594	Msa0424340:CDS	65.0%
	GACACGCTCTTGGACTGCCG+AGG	-	chr3_2:74540585-74540604	Msa0424340:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_2	gene	74540105	74541857	74540105	ID=Msa0424340;Name=Msa0424340
chr3_2	mRNA	74540105	74541857	74540105	ID=Msa0424340-mRNA-1;Parent=Msa0424340;Name=Msa0424340-mRNA-1;_AED=0.25;_eAED=0.25;_QI=58\|1\|1\|1\|1\|1\|2\|222\|363
chr3_2	exon	74540105	74540869	74540105	ID=Msa0424340-mRNA-1:exon:18826;Parent=Msa0424340-mRNA-1
chr3_2	exon	74541251	74541857	74541251	ID=Msa0424340-mRNA-1:exon:18825;Parent=Msa0424340-mRNA-1
chr3_2	five_prime_UTR	74541800	74541857	74541800	ID=Msa0424340-mRNA-1:five_prime_utr;Parent=Msa0424340-mRNA-1
chr3_2	CDS	74541251	74541799	74541251	ID=Msa0424340-mRNA-1:cds;Parent=Msa0424340-mRNA-1
chr3_2	CDS	74540327	74540869	74540327	ID=Msa0424340-mRNA-1:cds;Parent=Msa0424340-mRNA-1
chr3_2	three_prime_UTR	74540105	74540326	74540105	ID=Msa0424340-mRNA-1:three_prime_utr;Parent=Msa0424340-mRNA-1

Gene Sequence

>Msa0424340

ATGATGATGGCGATGTGCACCCAATTAGGAGGACCAACGCATGCATGGACTCCACCACAATGCCACCTAAAGACCCCATCCCAAAAAGTCCAAAAGACACACTCGATGTCTCCGGAAAAGAAAGAAATCTTCAAGTCATTAGAGAATTGGGTCTCACAAAGTGTGCTTCCTCTAGCCAAACCCGTGGAGGAATGCTGGCAGCCACATGATTTATTGCCAGATTCATCACTACCGTCTGATGAGTTCATCGATCAAGTAAAAGACTTAAGAGAACGAACGACTAAGCTTCCAGACGATTATCTCGTAGTTTTGGTGGGTGACATGATCACTGAAGAAGCATTGCCTATGTACCAATCATGGATAAACACGACTGATGGGGTTGGAGACGAGACTGGGTCAAGCACCAATCCTTGGGCCGTATGGACACGCTCTTGGACTGCCGAGGAAAATAGGCATGGCGATTTGCTCAGAACTTATCTCTATCTCTCGGGTCGGGTTGATATGCACATGATTGAGAAGACTATCCAATACTTGATTGGGGCTGGCATGGATATAGGAACCGAAAACAACCCATATATGGGAGTTGTTTATGCATCCTTTCAAGAGAGAGCCACTTTTGTATCACACAGTAATATGGCTCGTCTGGCTAAGGAGACGGGTGATCCAGTGCTTGCACGCATATGTGGCACGATCGCCGCAGATGAAAAACGCCACGAGATTGCATACGAGAGGATCACTGAGAAACTTCTAGAAGTGGACCCCACAGAGACAATGCTAGCCATAGCAAAAATAATGAGTGGCAACATAACGATGCCTGGGCACTTGATGCATGATGGACGGGACCCACACCTCTTCGACAATTTCTCCTCTGTCGCACAACGCATTGGTGTGTACAAGGTTAGTGACTACATCGATAGCTTGGAGTTCTTGATTGGATGGTGGAGATTGGAGAAGCTTGAGGGTTTGACGAGCGGAGGAAAACATGCACAAGAACTTGTGTGTGGGCTTGTACCCAAGATTAGGAGGCTACAAGAACGTGCTGATGAGCGAGTGAAAAAGATGAAACCCAAGTTTAGTTGGATCTTTCAATAA

Protein sequence

>Msa0424340

MMMAMCTQLGGPTHAWTPPQCHLKTPSQKVQKTHSMSPEKKEIFKSLENWVSQSVLPLAKPVEECWQPHDLLPDSSLPSDEFIDQVKDLRERTTKLPDDYLVVLVGDMITEEALPMYQSWINTTDGVGDETGSSTNPWAVWTRSWTAEENRHGDLLRTYLYLSGRVDMHMIEKTIQYLIGAGMDIGTENNPYMGVVYASFQERATFVSHSNMARLAKETGDPVLARICGTIAADEKRHEIAYERITEKLLEVDPTETMLAIAKIMSGNITMPGHLMHDGRDPHLFDNFSSVAQRIGVYKVSDYIDSLEFLIGWWRLEKLEGLTSGGKHAQELVCGLVPKIRRLQERADERVKKMKPKFSWIFQ*